AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77682


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77682.t1 MTR_4g036415 98.305 767 9 1 1 763 1 767 0.0 1514
MS.gene77682.t1 MTR_2g005590 47.154 123 59 2 213 329 162 284 1.98e-26 110
MS.gene77682.t1 MTR_7g074100 46.341 123 60 3 213 329 136 258 6.65e-26 108
MS.gene77682.t1 MTR_8g005550 44.776 134 67 4 202 329 121 253 1.08e-25 107
MS.gene77682.t1 MTR_8g006580 44.776 134 67 4 202 329 121 253 1.08e-25 107
MS.gene77682.t1 MTR_8g006605 44.776 134 67 4 202 329 121 253 1.08e-25 107
MS.gene77682.t1 MTR_8g005430 44.361 133 68 3 202 329 121 252 1.87e-25 107
MS.gene77682.t1 MTR_2g005590 46.774 124 59 3 213 329 162 285 7.62e-25 106
MS.gene77682.t1 MTR_3g010220 39.623 159 85 5 180 329 113 269 1.92e-24 104
MS.gene77682.t1 MTR_3g083770 30.973 226 119 6 91 304 68 268 1.92e-24 109
MS.gene77682.t1 MTR_3g083770 30.973 226 118 6 91 304 68 267 2.65e-24 109
MS.gene77682.t1 MTR_5g075710 44.800 125 59 4 213 329 135 257 3.32e-24 103
MS.gene77682.t1 MTR_5g075710 44.800 125 59 4 213 329 120 242 5.11e-24 102
MS.gene77682.t1 MTR_5g075710 43.902 123 63 2 213 329 98 220 3.02e-22 97.1
MS.gene77682.t1 MTR_3g075500 45.000 80 44 0 449 528 208 287 2.29e-14 74.7
MS.gene77682.t1 MTR_4g070080 45.946 74 40 0 450 523 9 82 4.10e-14 70.1
MS.gene77682.t1 MTR_4g081520 43.820 89 46 2 446 534 50 134 5.79e-14 70.1
MS.gene77682.t1 MTR_4g070080 45.946 74 40 0 450 523 9 82 9.22e-14 70.1
MS.gene77682.t1 MTR_3g062640 40.000 100 50 3 213 304 136 233 9.99e-14 72.0
MS.gene77682.t1 MTR_7g013740 36.782 87 55 0 442 528 35 121 2.12e-12 65.9
MS.gene77682.t1 MTR_4g070190 41.892 74 43 0 450 523 11 84 2.94e-12 65.9
MS.gene77682.t1 MTR_7g013730 34.091 88 58 0 442 529 35 122 3.91e-12 67.4
MS.gene77682.t1 MTR_4g104470 40.506 79 47 0 450 528 219 297 5.89e-12 67.8
MS.gene77682.t1 MTR_4g109540 35.366 82 53 0 447 528 42 123 6.88e-12 67.0
MS.gene77682.t1 MTR_1g045510 42.667 75 43 0 449 523 206 280 2.76e-11 65.5
MS.gene77682.t1 MTR_4g070140 43.243 74 42 0 450 523 11 84 3.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77682.t1 AT5G51300 66.957 805 196 18 5 763 24 804 0.0 944
MS.gene77682.t1 AT5G51300 66.957 805 196 18 5 763 24 804 0.0 944
MS.gene77682.t1 AT5G51300 66.957 805 196 18 5 763 24 804 0.0 944
MS.gene77682.t1 AT1G09660 46.565 131 62 3 207 329 142 272 5.06e-28 115
MS.gene77682.t1 AT1G09660 46.565 131 62 3 207 329 142 272 5.06e-28 115
MS.gene77682.t1 AT3G08620 44.361 133 67 3 202 328 83 214 6.19e-26 107
MS.gene77682.t1 AT3G08620 44.361 133 67 3 202 328 128 259 7.91e-26 108
MS.gene77682.t1 AT2G38610 43.704 135 69 3 202 330 129 262 3.40e-25 106
MS.gene77682.t1 AT2G38610 43.704 135 69 3 202 330 129 262 3.40e-25 106
MS.gene77682.t1 AT4G26480 44.715 123 62 3 213 329 78 200 5.73e-24 101
MS.gene77682.t1 AT4G26480 44.715 123 62 3 213 329 163 285 1.24e-23 102
MS.gene77682.t1 AT4G26480 44.715 123 62 3 213 329 163 285 1.24e-23 102
MS.gene77682.t1 AT5G56140 43.902 123 63 3 213 329 169 291 2.18e-23 102
MS.gene77682.t1 AT3G32940 29.767 215 102 7 97 304 55 227 1.40e-18 90.9
MS.gene77682.t1 AT1G09660 42.105 114 56 4 207 312 142 253 3.07e-16 80.1
MS.gene77682.t1 AT4G24770 45.570 79 43 0 449 527 246 324 8.16e-15 77.0
MS.gene77682.t1 AT4G24770 45.570 79 43 0 449 527 246 324 8.16e-15 77.0
MS.gene77682.t1 AT4G13860 41.026 78 46 0 447 524 3 80 3.42e-14 68.9
MS.gene77682.t1 AT3G23830 45.455 77 42 0 447 523 35 111 5.17e-13 67.4
MS.gene77682.t1 AT3G23830 45.455 77 42 0 447 523 35 111 5.17e-13 67.4
MS.gene77682.t1 AT5G54580 41.026 78 46 0 446 523 55 132 6.01e-13 67.8
MS.gene77682.t1 AT1G18630 44.156 77 43 0 447 523 36 112 6.41e-13 67.8
MS.gene77682.t1 AT4G13850 40.000 105 60 2 423 527 14 115 7.11e-13 66.6
MS.gene77682.t1 AT5G50250 44.000 75 42 0 449 523 209 283 9.87e-13 70.1
MS.gene77682.t1 AT4G39260 40.541 74 44 0 450 523 9 82 1.97e-12 64.3
MS.gene77682.t1 AT5G47320 43.210 81 46 0 447 527 31 111 3.08e-12 67.0
MS.gene77682.t1 AT4G13850 40.000 105 60 2 423 527 14 115 3.71e-12 65.1
MS.gene77682.t1 AT4G13850 40.000 105 60 2 423 527 14 115 4.58e-12 65.1
MS.gene77682.t1 AT4G39260 40.541 74 44 0 450 523 9 82 4.81e-12 64.3
MS.gene77682.t1 AT4G13850 40.000 105 60 2 423 527 14 115 5.13e-12 65.1
MS.gene77682.t1 AT1G03457 42.667 75 43 0 448 522 226 300 5.69e-12 68.2
MS.gene77682.t1 AT1G03457 42.667 75 43 0 448 522 340 414 1.04e-11 68.2
MS.gene77682.t1 AT5G61030 37.500 80 50 0 444 523 37 116 1.05e-11 67.0
MS.gene77682.t1 AT5G61030 37.500 80 50 0 444 523 37 116 1.05e-11 67.0
MS.gene77682.t1 AT1G03457 42.667 75 43 0 448 522 331 405 1.16e-11 68.2
MS.gene77682.t1 AT4G39260 40.541 74 44 0 450 523 9 82 1.30e-11 64.3
MS.gene77682.t1 AT2G21660 40.541 74 44 0 450 523 11 84 1.55e-11 63.5
MS.gene77682.t1 AT2G21660 40.541 74 44 0 450 523 11 84 2.23e-11 63.5
MS.gene77682.t1 AT2G37220 40.244 82 48 1 446 527 90 170 3.22e-11 65.5
MS.gene77682.t1 AT5G06210 36.634 101 56 2 447 540 34 133 6.26e-11 61.6

Find 292 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCAATGTTTGAATTTC+AGG 0.055676 4.4:+67505527 None:intergenic
ATCCAATTGTTTCAACAATT+TGG 0.151016 4.4:-67504510 MS.gene77682:CDS
CCTCCTTGGGCTAACAATTC+TGG 0.215980 4.4:-67504648 MS.gene77682:CDS
TGAACCTATATATGATAATA+TGG 0.217428 4.4:-67505423 MS.gene77682:CDS
ATCTTTGTCGGTTCCGCTTC+GGG 0.224492 4.4:+67505739 None:intergenic
TGTTATGGCAAAAGTTATTA+AGG 0.246290 4.4:-67504481 MS.gene77682:CDS
CCAACATATCCTGCATCTTA+TGG 0.257559 4.4:-67503886 MS.gene77682:CDS
CCGTTCTGATCGTTTGAATC+TGG 0.262072 4.4:+67505653 None:intergenic
CGGCTTTGAATGGGACGATT+AGG 0.278069 4.4:-67504941 MS.gene77682:CDS
GCAATTGGTTCGGGCAGTTC+TGG 0.291106 4.4:-67504678 MS.gene77682:CDS
TGGTGCCGTTGATGCCGTTT+TGG 0.296938 4.4:+67505840 None:intergenic
AATTCAACTTCCTGATTTCA+TGG 0.302742 4.4:-67505567 MS.gene77682:CDS
GAATGAGGATTTGCATGTTT+TGG 0.305991 4.4:-67505078 MS.gene77682:CDS
TGGGCTAACAATTCTGGTTC+TGG 0.308759 4.4:-67504642 MS.gene77682:CDS
TGTAGGTTGTGTGGTGAGCC+TGG 0.310565 4.4:-67504906 MS.gene77682:CDS
CAGAATTTCTTGGCTGAGTT+GGG 0.312746 4.4:-67504744 MS.gene77682:CDS
GTTGTCTTAATCGCAGATTC+AGG 0.313080 4.4:+67504711 None:intergenic
CGGTTCGTCATCAGCCCATC+TGG 0.320048 4.4:+67505598 None:intergenic
GATCTTTGTCGGTTCCGCTT+CGG 0.321344 4.4:+67505738 None:intergenic
TGGTGCTAAGATTGTGATTC+GGG 0.329516 4.4:-67505165 MS.gene77682:CDS
TCCGCCTGATTGATCTTTGT+CGG 0.336120 4.4:+67505727 None:intergenic
GGATTGTATGGAGGAGGAAT+AGG 0.337627 4.4:+67504156 None:intergenic
AAATCAGGAAGTTGAATTAC+CGG 0.338043 4.4:+67505572 None:intergenic
CACCAAATTGTTGAAACAAT+TGG 0.341079 4.4:+67504508 None:intergenic
AGTACACCACAAGCTGGATT+AGG 0.345327 4.4:-67504615 MS.gene77682:CDS
AGGGGCTGGTGCGGTTAAAA+AGG 0.349731 4.4:-67504595 MS.gene77682:CDS
TAGTACTTTGGCAATTGGTT+CGG 0.354026 4.4:-67504688 MS.gene77682:CDS
GGCTGATGACGAACCGAAAC+CGG 0.354826 4.4:-67505591 MS.gene77682:CDS
GTACACCACAAGCTGGATTA+GGG 0.357290 4.4:-67504614 MS.gene77682:CDS
GGAAGTTGAATTACCGGTTT+CGG 0.361177 4.4:+67505578 None:intergenic
GGCTTTGAATGGGACGATTA+GGG 0.361903 4.4:-67504940 MS.gene77682:CDS
CCCATTGGGAGTGCTCCTCC+TGG 0.362255 4.4:-67504213 MS.gene77682:CDS
TAAAGCTTCTTCTGAAGCTT+TGG 0.365077 4.4:+67505278 None:intergenic
ACAATTTGGTGAGATTGTTA+TGG 0.367806 4.4:-67504496 MS.gene77682:CDS
ATGATACAAATTTGTACATT+GGG 0.378528 4.4:-67504566 MS.gene77682:CDS
AGTGCTCCTCCTGGGAGTTA+TGG 0.379254 4.4:-67504204 MS.gene77682:CDS
AGTACTTTGGCAATTGGTTC+GGG 0.379590 4.4:-67504687 MS.gene77682:CDS
GATTAAGACAACTAGTACTT+TGG 0.382369 4.4:-67504700 MS.gene77682:CDS
GGAGCTGCTGGTGGCATTGA+AGG 0.382420 4.4:+67503910 None:intergenic
GTTCTGGAAGCAATCCTCCT+TGG 0.384094 4.4:-67504662 MS.gene77682:CDS
CAGCATTGCAAATGCGCCTT+GGG 0.384172 4.4:-67503788 MS.gene77682:CDS
AGGAGGGGCGGAATGATTAC+TGG 0.384270 4.4:+67503765 None:intergenic
GATGCGCTTGAGGCTGCGGC+TGG 0.389783 4.4:-67505038 MS.gene77682:CDS
TATATGATAATATGGGGATT+AGG 0.390370 4.4:-67505415 MS.gene77682:CDS
TGGACGTGAATCGGTGTTAT+CGG 0.392557 4.4:+67505811 None:intergenic
AGGGAGCTTGCGGCTTTGAA+TGG 0.394860 4.4:-67504951 MS.gene77682:CDS
GTTTGTAAGCATTGTGGGGA+TGG 0.395994 4.4:-67504831 MS.gene77682:CDS
GGTTTATCGTTGAGCGGTAG+TGG 0.399756 4.4:+67505878 None:intergenic
ACAGCCGACGCAGGTGGGCC+TGG 0.401744 4.4:+67504303 None:intergenic
TCCTCATTCTCCGACGGATC+CGG 0.402901 4.4:+67505092 None:intergenic
TTGGGCTTATTATTGGGCCT+AGG 0.403109 4.4:-67505220 MS.gene77682:CDS
AGCATAAGAGGCAGCAACTT+AGG 0.403660 4.4:-67504971 MS.gene77682:CDS
CTCTCCGAAAACGGTTTAAC+CGG 0.404174 4.4:-67505770 MS.gene77682:CDS
ACAACTAGTACTTTGGCAAT+TGG 0.404593 4.4:-67504693 MS.gene77682:CDS
CCAATTGGCTGGCTTTGAAC+AGG 0.407319 4.4:+67504270 None:intergenic
CCACCCACTCTTGAGGATGA+TGG 0.408818 4.4:-67504537 MS.gene77682:CDS
TGGTCTGAAGTAGGGGCAGG+AGG 0.410645 4.4:+67503817 None:intergenic
CCGCCACCGGGACGAAGAAA+AGG 0.411481 4.4:-67505625 MS.gene77682:CDS
TTCTGGAAGCAATCCTCCTT+GGG 0.414696 4.4:-67504661 MS.gene77682:CDS
GAACCTATATATGATAATAT+GGG 0.415791 4.4:-67505422 MS.gene77682:CDS
TGTCCGGTGAAGGGTGCTAC+TGG 0.415903 4.4:-67504789 MS.gene77682:CDS
GAGGCACATTTCCAATGCTC+TGG 0.415977 4.4:+67503719 None:intergenic
TCCGCTTCGGGTGTTGCCGC+CGG 0.416865 4.4:+67505751 None:intergenic
TCAATACCACCCATGAAATC+AGG 0.417840 4.4:+67505557 None:intergenic
ACTATTGCAGTAAGAGTTGC+TGG 0.418096 4.4:-67504351 MS.gene77682:CDS
GTCTGAAGTAGGGGCAGGAG+GGG 0.418816 4.4:+67503819 None:intergenic
GGTCAACCTATGCCTCCTTA+TGG 0.419163 4.4:-67504087 MS.gene77682:CDS
CCTCAGCCTGTTGTACCTCC+AGG 0.422104 4.4:-67504321 MS.gene77682:CDS
TGGAATCGGTGGACGTGAAT+CGG 0.422421 4.4:+67505802 None:intergenic
GAAGGAGATCTAGCCCCTTC+AGG 0.424049 4.4:+67505449 None:intergenic
CATTTGCAATGCTGTGTGAT+TGG 0.424259 4.4:+67503797 None:intergenic
TATACCGGTGGCGGTCCCAT+TGG 0.425842 4.4:-67504228 MS.gene77682:CDS
TGCTGCATTTCACCAGAAGC+AGG 0.430915 4.4:+67504012 None:intergenic
TATACCGATGAAAGAGTATC+CGG 0.432063 4.4:-67505255 MS.gene77682:CDS
TCGGCGGAAAAGACGTCATA+TGG 0.435235 4.4:-67503673 MS.gene77682:CDS
TGATCGTTTGAATCTGGCTG+TGG 0.435288 4.4:+67505659 None:intergenic
TGGGCTTATTATTGGGCCTA+GGG 0.437365 4.4:-67505219 MS.gene77682:CDS
TCTGTACCGACCAACATGTA+TGG 0.438751 4.4:-67503943 MS.gene77682:CDS
ATACCGGTGGCGGTCCCATT+GGG 0.441379 4.4:-67504227 MS.gene77682:CDS
CTGGTGCTAAGATTGTGATT+CGG 0.442727 4.4:-67505166 MS.gene77682:CDS
AAGATTGTGATTCGGGGTAA+AGG 0.445533 4.4:-67505158 MS.gene77682:CDS
AGCTTCTTCTGAAGCTTTGG+TGG 0.445877 4.4:+67505281 None:intergenic
TTAGGGATGAAGAGTATTGT+AGG 0.446170 4.4:-67504923 MS.gene77682:CDS
GTTATTAAGGATCGAATGAC+AGG 0.447306 4.4:-67504468 MS.gene77682:CDS
ACCGGATCCGTCGGAGAATG+AGG 0.448730 4.4:-67505093 MS.gene77682:CDS
TTAAACGTCGAAGTCCTTGT+AGG 0.449328 4.4:+67504864 None:intergenic
ACAGCATTGCAAATGCGCCT+TGG 0.451912 4.4:-67503789 MS.gene77682:CDS
CACGCATACTGCCGATGCCC+AGG 0.452453 4.4:+67504888 None:intergenic
GCTATTGCAGCCTGTGGATG+AGG 0.452749 4.4:-67505003 MS.gene77682:CDS
GGGAGCTTGCGGCTTTGAAT+GGG 0.453782 4.4:-67504950 MS.gene77682:CDS
GGTGGGCCTGGAGGTACAAC+AGG 0.456453 4.4:+67504315 None:intergenic
AATCCACTTCTCTCCGAAAA+CGG 0.458472 4.4:-67505779 MS.gene77682:CDS
TGATGAGTATCAGAATTTCT+TGG 0.459979 4.4:-67504754 MS.gene77682:CDS
ATAAGTAGAATGTTGCAATC+TGG 0.461645 4.4:-67505491 MS.gene77682:CDS
CCATTGGGAGTGCTCCTCCT+GGG 0.463144 4.4:-67504212 MS.gene77682:CDS
ACCGCCACCGGTATATTGTT+GGG 0.463821 4.4:+67504236 None:intergenic
GGCTGATGCGCTTGAGGCTG+CGG 0.465364 4.4:-67505042 MS.gene77682:CDS
TGGAGGCACTCCTGTCCCAT+GGG 0.466274 4.4:-67504184 MS.gene77682:CDS
AGGTTGTTTGTAAGCATTGT+GGG 0.470243 4.4:-67504836 MS.gene77682:CDS
ATCGTTGAGCGGTAGTGGAT+TGG 0.472413 4.4:+67505883 None:intergenic
CTCAAGGCGATAGCCATTCA+TGG 0.472803 4.4:+67504380 None:intergenic
GCTTGAGGCTGCGGCTGGTA+TGG 0.473691 4.4:-67505033 MS.gene77682:CDS
GACCGCCACCGGTATATTGT+TGG 0.475580 4.4:+67504235 None:intergenic
TTCTGAGTATGAGAAATTCA+TGG 0.476992 4.4:-67503644 MS.gene77682:CDS
GCATAAGGATTGTATGGAGG+AGG 0.478828 4.4:+67504150 None:intergenic
GGATATGTTGGTGGAGCTGC+TGG 0.481070 4.4:+67503898 None:intergenic
GATGATACAAATTTGTACAT+TGG 0.481380 4.4:-67504567 MS.gene77682:CDS
TGCAGCAGAATTACCCTCCT+GGG 0.481585 4.4:-67503996 MS.gene77682:CDS
GCATAAGAGGCAGCAACTTA+GGG 0.481868 4.4:-67504970 MS.gene77682:CDS
ATGAATGGCTATCGCCTTGA+GGG 0.484462 4.4:-67504378 MS.gene77682:CDS
GATACATAGTTGATCCAGGC+GGG 0.485027 4.4:+67504121 None:intergenic
TCAGAATTTCTTGGCTGAGT+TGG 0.489105 4.4:-67504745 MS.gene77682:CDS
AGATTGTGATTCGGGGTAAA+GGG 0.490400 4.4:-67505157 MS.gene77682:CDS
AAGAGGATGGAGAAGGAGAC+TGG 0.491145 4.4:-67505185 MS.gene77682:CDS
TCTGAAGTAGGGGCAGGAGG+GGG 0.491665 4.4:+67503820 None:intergenic
ATGGATAGGCACCAATTGGC+TGG 0.493844 4.4:+67504259 None:intergenic
TTATTATCAGACTGCACCCC+AGG 0.496388 4.4:+67503979 None:intergenic
ATCCCCATATTATCATATAT+AGG 0.497159 4.4:+67505419 None:intergenic
GAGAGAAGTGGATTTGGAAT+CGG 0.498073 4.4:+67505788 None:intergenic
AATGCAATTGTTGCCATGAA+TGG 0.498742 4.4:-67504393 MS.gene77682:CDS
GTGGGCACAGCCGACGCAGG+TGG 0.500778 4.4:+67504297 None:intergenic
CCTTTAGATGATCGTCCTGA+AGG 0.501343 4.4:-67505464 MS.gene77682:CDS
GGGGACCTGTCGGCATGGGT+GGG 0.503889 4.4:+67504055 None:intergenic
TCATCCTAGTATTGATTGTC+CGG 0.504611 4.4:-67504805 MS.gene77682:CDS
CAGGTTTGAGTAAAGGATAC+GGG 0.505016 4.4:-67504449 MS.gene77682:CDS
CCTGTTCAAAGCCAGCCAAT+TGG 0.505090 4.4:-67504270 MS.gene77682:CDS
CTGGCTTTGAACAGGATAAG+TGG 0.506527 4.4:+67504278 None:intergenic
GCAGAAGAGGGATTTGAAAC+CGG 0.508144 4.4:-67505111 MS.gene77682:CDS
TGCAGACGAAGGAGGAGGAG+GGG 0.508439 4.4:+67503750 None:intergenic
CCATAAGATGCAGGATATGT+TGG 0.508849 4.4:+67503886 None:intergenic
CTTTAGATGATCGTCCTGAA+GGG 0.510187 4.4:-67505463 MS.gene77682:CDS
GGAGGAGCATAAGGATTGTA+TGG 0.510415 4.4:+67504144 None:intergenic
TAGTATTGATTGTCCGGTGA+AGG 0.510881 4.4:-67504799 MS.gene77682:CDS
CTGTGTGATTGGTCTGAAGT+AGG 0.514366 4.4:+67503808 None:intergenic
CAGAACGGCGAAGCCGCCAC+CGG 0.515344 4.4:-67505638 MS.gene77682:CDS
GTGGGTCCCATCGGCTTCTA+CGG 0.516793 4.4:+67505678 None:intergenic
GGAGGAATAGGAGGTCCCCA+TGG 0.517280 4.4:+67504168 None:intergenic
CGAATGACAGGTTTGAGTAA+AGG 0.518211 4.4:-67504456 MS.gene77682:CDS
CCAGGAGGAGCACTCCCAAT+GGG 0.520762 4.4:+67504213 None:intergenic
CAACTTCCTGATTTCATGGG+TGG 0.520799 4.4:-67505563 MS.gene77682:CDS
TTCCCAGTAGCACCCTTCAC+CGG 0.521265 4.4:+67504786 None:intergenic
ATAGGAGGTCCCCATGGGAC+AGG 0.522360 4.4:+67504174 None:intergenic
ATTCAACTTCCTGATTTCAT+GGG 0.522392 4.4:-67505566 MS.gene77682:CDS
ACTCCCAATGGGACCGCCAC+CGG 0.525906 4.4:+67504224 None:intergenic
GTATTTGCCACCCACTCTTG+AGG 0.527496 4.4:-67504544 MS.gene77682:CDS
GGTGGGTATTGAACACCATA+AGG 0.528437 4.4:+67504072 None:intergenic
GGAGGAACTGCATTATAGTA+AGG 0.528530 4.4:+67503850 None:intergenic
TGGGATGGATAGGCACCAAT+TGG 0.528906 4.4:+67504255 None:intergenic
ATATTATCATATATAGGTTC+AGG 0.529213 4.4:+67505425 None:intergenic
ACAGGTTTGAGTAAAGGATA+CGG 0.530195 4.4:-67504450 MS.gene77682:CDS
ATGCAGCAGAATTACCCTCC+TGG 0.530640 4.4:-67503997 MS.gene77682:CDS
TCCGCCGATGAGTTAGGAGG+AGG 0.531623 4.4:+67503688 None:intergenic
GGTCTGAAGTAGGGGCAGGA+GGG 0.532121 4.4:+67503818 None:intergenic
GGTAAAGGGTCGGTGAAAGA+AGG 0.532993 4.4:-67505143 MS.gene77682:CDS
AAGGTAGGTTGCAGCAGAAG+AGG 0.533663 4.4:-67505124 MS.gene77682:CDS
TCTGCAGACGAAGGAGGAGG+AGG 0.534861 4.4:+67503748 None:intergenic
GGCAGTATGCGTGTCCTACA+AGG 0.536158 4.4:-67504878 MS.gene77682:CDS
GCAGATCAATCCCAGAGCAT+TGG 0.537143 4.4:-67503730 MS.gene77682:CDS
GAGTTAGGAGGAGGCATAGG+TGG 0.538669 4.4:+67503697 None:intergenic
GGAACCGACAAAGATCAATC+AGG 0.538815 4.4:-67505731 MS.gene77682:CDS
AGACGAAGGAGGAGGAGGGG+CGG 0.540123 4.4:+67503753 None:intergenic
AATTTCTTGGCTGAGTTGGG+TGG 0.540197 4.4:-67504741 MS.gene77682:CDS
ATGGAGGCACTCCTGTCCCA+TGG 0.540461 4.4:-67504185 MS.gene77682:CDS
AGGCACATTTCCAATGCTCT+GGG 0.542648 4.4:+67503720 None:intergenic
CTGCAGACGAAGGAGGAGGA+GGG 0.542706 4.4:+67503749 None:intergenic
GTAGGTTGTGTGGTGAGCCT+GGG 0.545604 4.4:-67504905 MS.gene77682:CDS
GTCCGGTGAAGGGTGCTACT+GGG 0.545922 4.4:-67504788 MS.gene77682:CDS
GGATTTGAAACCGGATCCGT+CGG 0.546961 4.4:-67505102 MS.gene77682:CDS
ATCGGTGTTATCGGTGGTGG+TGG 0.547897 4.4:+67505820 None:intergenic
GATCGTTTGAATCTGGCTGT+GGG 0.548883 4.4:+67505660 None:intergenic
GGAGGATACATAGTTGATCC+AGG 0.549406 4.4:+67504117 None:intergenic
GCTGCATTTCACCAGAAGCA+GGG 0.550120 4.4:+67504013 None:intergenic
TCAGCAGGTGGCTTAAAAGC+AGG 0.550868 4.4:+67505311 None:intergenic
GGAGGATATCCATAAGATGC+AGG 0.551040 4.4:+67503877 None:intergenic
GGTATATTGTTGGGATGGAT+AGG 0.552672 4.4:+67504245 None:intergenic
CAATACCCACCCATGCCGAC+AGG 0.553737 4.4:-67504060 MS.gene77682:CDS
CCTTCAGGACGATCATCTAA+AGG 0.555385 4.4:+67505464 None:intergenic
GCTCCTCCTGGGAGTTATGG+AGG 0.555783 4.4:-67504201 MS.gene77682:CDS
GCATTATAGTAAGGTGGAGG+AGG 0.556594 4.4:+67503859 None:intergenic
ATTGGAATCGAGAGCCTCCA+TGG 0.556663 4.4:+67505901 None:intergenic
TGAGGCTGCGGCTGGTATGG+TGG 0.557666 4.4:-67505030 MS.gene77682:CDS
AGGTAGGTTGCAGCAGAAGA+GGG 0.559912 4.4:-67505123 MS.gene77682:CDS
TTCACCGGACAATCAATACT+AGG 0.560422 4.4:+67504801 None:intergenic
TGAACACCATAAGGAGGCAT+AGG 0.560821 4.4:+67504081 None:intergenic
GGGTGCTACTGGGAAGAAGA+TGG 0.562289 4.4:-67504778 MS.gene77682:CDS
TCCCAACAATATACCGGTGG+CGG 0.562455 4.4:-67504237 MS.gene77682:CDS
CATGAATGGCTATCGCCTTG+AGG 0.563895 4.4:-67504379 MS.gene77682:CDS
TGTGTGGTGAGCCTGGGCAT+CGG 0.564193 4.4:-67504899 MS.gene77682:CDS
TTTGGTGGTCTATAATCAGC+AGG 0.566022 4.4:+67505296 None:intergenic
CTGCAATAGTTCGACCCTCA+AGG 0.566323 4.4:+67504364 None:intergenic
TGTGTGATTGGTCTGAAGTA+GGG 0.566402 4.4:+67503809 None:intergenic
ACCTCCAGGCCCACCTGCGT+CGG 0.566557 4.4:-67504307 MS.gene77682:CDS
AATCTGGCTGTGGGTCCCAT+CGG 0.566587 4.4:+67505669 None:intergenic
AGAACGGCGAAGCCGCCACC+GGG 0.567142 4.4:-67505637 MS.gene77682:CDS
TGATCTGCAGACGAAGGAGG+AGG 0.568318 4.4:+67503745 None:intergenic
AGAAGTGGATTTGGAATCGG+TGG 0.569201 4.4:+67505791 None:intergenic
CTGTACCGACCAACATGTAT+GGG 0.570736 4.4:-67503942 MS.gene77682:CDS
TTAGGAGGAGGCATAGGTGG+AGG 0.571215 4.4:+67503700 None:intergenic
TACATAGTTGATCCAGGCGG+GGG 0.571433 4.4:+67504123 None:intergenic
AGCTGGATTAGGGGCTGGTG+CGG 0.572157 4.4:-67504604 MS.gene77682:CDS
CCACAAGCTGGATTAGGGGC+TGG 0.572511 4.4:-67504609 MS.gene77682:CDS
TGAATCGGTGTTATCGGTGG+TGG 0.573466 4.4:+67505817 None:intergenic
ATTCCCCAAAACGGCATCAA+CGG 0.574006 4.4:-67505845 MS.gene77682:CDS
TACTCAGAAGAGGATGGAGA+AGG 0.574391 4.4:-67505192 MS.gene77682:CDS
CCTGGAGGTACAACAGGCTG+AGG 0.576571 4.4:+67504321 None:intergenic
GGCTTATTATTGGGCCTAGG+GGG 0.577049 4.4:-67505217 MS.gene77682:CDS
TAAGATGCAGGATATGTTGG+TGG 0.577189 4.4:+67503889 None:intergenic
GATTGGTCTGAAGTAGGGGC+AGG 0.578662 4.4:+67503814 None:intergenic
AAGGGTCGGTGAAAGAAGGT+AGG 0.578669 4.4:-67505139 MS.gene77682:CDS
CCAGCCCCTAATCCAGCTTG+TGG 0.579159 4.4:+67504609 None:intergenic
GGGGAATACTCAGAAGAGGA+TGG 0.579237 4.4:-67505198 MS.gene77682:CDS
TCATTCAAAACCTCATCCAC+AGG 0.579571 4.4:+67504993 None:intergenic
CCACCGGTATATTGTTGGGA+TGG 0.579934 4.4:+67504240 None:intergenic
CCCAGGAGGAGCACTCCCAA+TGG 0.580485 4.4:+67504212 None:intergenic
AGTATTGATTGTCCGGTGAA+GGG 0.580602 4.4:-67504798 MS.gene77682:CDS
TACCCCGGATACTCTTTCAT+CGG 0.581753 4.4:+67505251 None:intergenic
CTGCATTTCACCAGAAGCAG+GGG 0.584633 4.4:+67504014 None:intergenic
GCGGAATGATTACTGGCCCA+AGG 0.585729 4.4:+67503772 None:intergenic
GGAGGTACAACAGGCTGAGG+AGG 0.586166 4.4:+67504324 None:intergenic
TATCCATCCCAACAATATAC+CGG 0.586211 4.4:-67504243 MS.gene77682:CDS
GCTAACAATTCTGGTTCTGG+TGG 0.586625 4.4:-67504639 MS.gene77682:CDS
GAAACCCTAATTCCCCAAAA+CGG 0.588886 4.4:-67505854 MS.gene77682:CDS
ATACCGATGAAAGAGTATCC+GGG 0.589156 4.4:-67505254 MS.gene77682:CDS
CGAAGAAAAGGAAATCCAGA+TGG 0.589301 4.4:-67505613 MS.gene77682:CDS
GAGGTTGTTTGTAAGCATTG+TGG 0.589881 4.4:-67504837 MS.gene77682:CDS
TGTAAGCATTGTGGGGATGG+TGG 0.589931 4.4:-67504828 MS.gene77682:CDS
GGATACGGCTGATGCGCTTG+AGG 0.590654 4.4:-67505048 MS.gene77682:CDS
CAAACCATCATCCTCAAGAG+TGG 0.591247 4.4:+67504533 None:intergenic
ATAGGTTGACCATGCATAGG+AGG 0.592649 4.4:+67504099 None:intergenic
GAGAGTATCGTGCTCGTGAG+AGG 0.595551 4.4:-67505382 MS.gene77682:CDS
GAGGAATAGGAGGTCCCCAT+GGG 0.598071 4.4:+67504169 None:intergenic
GGTGGTAGTACACCACAAGC+TGG 0.598386 4.4:-67504621 MS.gene77682:CDS
TCATATATAGGTTCAGGTGA+AGG 0.598965 4.4:+67505431 None:intergenic
ACCGGCGGCAACACCCGAAG+CGG 0.599063 4.4:-67505752 MS.gene77682:CDS
GTGTGATTGGTCTGAAGTAG+GGG 0.599262 4.4:+67503810 None:intergenic
CATTGTGTTCCCATACATGT+TGG 0.599711 4.4:+67503933 None:intergenic
GATGAGTTAGGAGGAGGCAT+AGG 0.601322 4.4:+67503694 None:intergenic
TGGCTTTGAACAGGATAAGT+GGG 0.601464 4.4:+67504279 None:intergenic
GGGCTTATTATTGGGCCTAG+GGG 0.601483 4.4:-67505218 MS.gene77682:CDS
TAAGTGGGCACAGCCGACGC+AGG 0.602467 4.4:+67504294 None:intergenic
TGGGATTGATCTGCAGACGA+AGG 0.602817 4.4:+67503739 None:intergenic
GTGTTCCCATACATGTTGGT+CGG 0.605470 4.4:+67503937 None:intergenic
AACCTATATATGATAATATG+GGG 0.606432 4.4:-67505421 MS.gene77682:CDS
TTGTATGGAGGAGGAATAGG+AGG 0.606833 4.4:+67504159 None:intergenic
GATTGATCTGCAGACGAAGG+AGG 0.607157 4.4:+67503742 None:intergenic
GACTTCGACGTTTAAGAGTG+AGG 0.610374 4.4:-67504856 MS.gene77682:CDS
TGGGCACAGCCGACGCAGGT+GGG 0.613083 4.4:+67504298 None:intergenic
ACTATGTATCCTCCTATGCA+TGG 0.613317 4.4:-67504108 MS.gene77682:CDS
AACGACGCCGTAGAAGCCGA+TGG 0.617732 4.4:-67505685 MS.gene77682:CDS
GAACCAGAATTGTTAGCCCA+AGG 0.618282 4.4:+67504645 None:intergenic
ATACATAGTTGATCCAGGCG+GGG 0.618361 4.4:+67504122 None:intergenic
CCATCATCCTCAAGAGTGGG+TGG 0.619730 4.4:+67504537 None:intergenic
GGTGGTCTATAATCAGCAGG+TGG 0.619754 4.4:+67505299 None:intergenic
AAACCATCATCCTCAAGAGT+GGG 0.620492 4.4:+67504534 None:intergenic
GGAGTGCCTCCATAACTCCC+AGG 0.620528 4.4:+67504195 None:intergenic
GGTTGTTTGTAAGCATTGTG+GGG 0.621386 4.4:-67504835 MS.gene77682:CDS
TGCAAATCCTCATTCTCCGA+CGG 0.622653 4.4:+67505086 None:intergenic
GCAGCAACTTAGGGAGCTTG+CGG 0.623589 4.4:-67504961 MS.gene77682:CDS
GAAGAGTATTGTAGGTTGTG+TGG 0.624175 4.4:-67504915 MS.gene77682:CDS
TTTAGATGATCGTCCTGAAG+GGG 0.630920 4.4:-67505462 MS.gene77682:CDS
TGTGATTCGGGGTAAAGGGT+CGG 0.632552 4.4:-67505153 MS.gene77682:CDS
TATGCCTCCTCCTAACTCAT+CGG 0.633008 4.4:-67503692 MS.gene77682:CDS
ACTGCATTATAGTAAGGTGG+AGG 0.633851 4.4:+67503856 None:intergenic
GGAGCATAAGGATTGTATGG+AGG 0.640513 4.4:+67504147 None:intergenic
GGAGAAGCTATTGCAGCCTG+TGG 0.641988 4.4:-67505009 MS.gene77682:CDS
GAAGAAAAGGAAATCCAGAT+GGG 0.642143 4.4:-67505612 MS.gene77682:CDS
TACACCACAAGCTGGATTAG+GGG 0.643761 4.4:-67504613 MS.gene77682:CDS
GCCTCCTCCTAACTCATCGG+CGG 0.644516 4.4:-67503689 MS.gene77682:CDS
GGAACTGCATTATAGTAAGG+TGG 0.646045 4.4:+67503853 None:intergenic
TCCGAAAACGGTTTAACCGG+CGG 0.646554 4.4:-67505767 MS.gene77682:CDS
ACGACGCCGTAGAAGCCGAT+GGG 0.646571 4.4:-67505684 MS.gene77682:CDS
TATGTTGGTGGAGCTGCTGG+TGG 0.648824 4.4:+67503901 None:intergenic
TACCGATGAAAGAGTATCCG+GGG 0.650644 4.4:-67505253 MS.gene77682:CDS
TTATCAGACTGCACCCCAGG+AGG 0.652632 4.4:+67503982 None:intergenic
GGCATAGGTTGACCATGCAT+AGG 0.653836 4.4:+67504096 None:intergenic
AGCCCAATAAAATTATACCC+CGG 0.654514 4.4:+67505236 None:intergenic
TATCAGACTGCACCCCAGGA+GGG 0.665423 4.4:+67503983 None:intergenic
GGAGGCACTCCTGTCCCATG+GGG 0.666907 4.4:-67504183 MS.gene77682:CDS
CCAGAATTGTTAGCCCAAGG+AGG 0.668651 4.4:+67504648 None:intergenic
GCCGACGCAGGTGGGCCTGG+AGG 0.675462 4.4:+67504306 None:intergenic
ACGTGAATCGGTGTTATCGG+TGG 0.679354 4.4:+67505814 None:intergenic
GTTTCGGGTTTATCGTTGAG+CGG 0.681383 4.4:+67505872 None:intergenic
GCAGCAGAATTACCCTCCTG+GGG 0.683396 4.4:-67503995 MS.gene77682:CDS
TGCATTTCACCAGAAGCAGG+GGG 0.684026 4.4:+67504015 None:intergenic
CCAGATTCAAACGATCAGAA+CGG 0.685543 4.4:-67505653 MS.gene77682:CDS
GGGTATTGAACACCATAAGG+AGG 0.687098 4.4:+67504075 None:intergenic
CCATCCCAACAATATACCGG+TGG 0.690545 4.4:-67504240 MS.gene77682:CDS
ACCGACAAAGATCAATCAGG+CGG 0.691376 4.4:-67505728 MS.gene77682:CDS
GGTGCTAAGATTGTGATTCG+GGG 0.721073 4.4:-67505164 MS.gene77682:CDS
GTGCCTCCATAACTCCCAGG+AGG 0.738237 4.4:+67504198 None:intergenic
GAAGTATGCTGATATCACAA+TGG 0.751667 4.4:-67504421 MS.gene77682:CDS
GGATACATAGTTGATCCAGG+CGG 0.770511 4.4:+67504120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCTATATATGATAATATG+GGG - chr4.4:67504108-67504127 MS.gene77682:CDS 20.0%
!! ATATTATCATATATAGGTTC+AGG + chr4.4:67504107-67504126 None:intergenic 20.0%
!! ATGATACAAATTTGTACATT+GGG - chr4.4:67504963-67504982 MS.gene77682:CDS 20.0%
!! GAACCTATATATGATAATAT+GGG - chr4.4:67504107-67504126 MS.gene77682:CDS 20.0%
!! TGAACCTATATATGATAATA+TGG - chr4.4:67504106-67504125 MS.gene77682:CDS 20.0%
!!! AATTTTATTGGGCTTATTAT+TGG - chr4.4:67504302-67504321 MS.gene77682:CDS 20.0%
!!! ATTTTATTGGGCTTATTATT+GGG - chr4.4:67504303-67504322 MS.gene77682:CDS 20.0%
! ATCCAATTGTTTCAACAATT+TGG - chr4.4:67505019-67505038 MS.gene77682:CDS 25.0%
! ATCCCCATATTATCATATAT+AGG + chr4.4:67504113-67504132 None:intergenic 25.0%
! CTATTCAATGTTTGAATTTC+AGG + chr4.4:67504005-67504024 None:intergenic 25.0%
! GATGATACAAATTTGTACAT+TGG - chr4.4:67504962-67504981 MS.gene77682:CDS 25.0%
! TATATGATAATATGGGGATT+AGG - chr4.4:67504114-67504133 MS.gene77682:CDS 25.0%
! TGTTATGGCAAAAGTTATTA+AGG - chr4.4:67505048-67505067 MS.gene77682:CDS 25.0%
AAATCAGGAAGTTGAATTAC+CGG + chr4.4:67503960-67503979 None:intergenic 30.0%
AATTCAACTTCCTGATTTCA+TGG - chr4.4:67503962-67503981 MS.gene77682:CDS 30.0%
ATAAGTAGAATGTTGCAATC+TGG - chr4.4:67504038-67504057 MS.gene77682:CDS 30.0%
ATTCAACTTCCTGATTTCAT+GGG - chr4.4:67503963-67503982 MS.gene77682:CDS 30.0%
CACCAAATTGTTGAAACAAT+TGG + chr4.4:67505024-67505043 None:intergenic 30.0%
GATTAAGACAACTAGTACTT+TGG - chr4.4:67504829-67504848 MS.gene77682:CDS 30.0%
TGATGAGTATCAGAATTTCT+TGG - chr4.4:67504775-67504794 MS.gene77682:CDS 30.0%
TTCTGAGTATGAGAAATTCA+TGG - chr4.4:67505885-67505904 MS.gene77682:CDS 30.0%
! ACAATTTGGTGAGATTGTTA+TGG - chr4.4:67505033-67505052 MS.gene77682:CDS 30.0%
! ATCCGGGGTATAATTTTATT+GGG - chr4.4:67504291-67504310 MS.gene77682:CDS 30.0%
! TATCCGGGGTATAATTTTAT+TGG - chr4.4:67504290-67504309 MS.gene77682:CDS 30.0%
AATGCAATTGTTGCCATGAA+TGG - chr4.4:67505136-67505155 MS.gene77682:CDS 35.0%
ACAACTAGTACTTTGGCAAT+TGG - chr4.4:67504836-67504855 MS.gene77682:CDS 35.0%
ACAGGTTTGAGTAAAGGATA+CGG - chr4.4:67505079-67505098 MS.gene77682:CDS 35.0%
AGCCCAATAAAATTATACCC+CGG + chr4.4:67504296-67504315 None:intergenic 35.0%
GAAGAAAAGGAAATCCAGAT+GGG - chr4.4:67503917-67503936 MS.gene77682:CDS 35.0%
GAAGTATGCTGATATCACAA+TGG - chr4.4:67505108-67505127 MS.gene77682:CDS 35.0%
GTTATTAAGGATCGAATGAC+AGG - chr4.4:67505061-67505080 MS.gene77682:CDS 35.0%
TAGTACTTTGGCAATTGGTT+CGG - chr4.4:67504841-67504860 MS.gene77682:CDS 35.0%
TATCCATCCCAACAATATAC+CGG - chr4.4:67505286-67505305 MS.gene77682:CDS 35.0%
TCATATATAGGTTCAGGTGA+AGG + chr4.4:67504101-67504120 None:intergenic 35.0%
! AGGTTGTTTGTAAGCATTGT+GGG - chr4.4:67504693-67504712 MS.gene77682:CDS 35.0%
! GAATGAGGATTTGCATGTTT+TGG - chr4.4:67504451-67504470 MS.gene77682:CDS 35.0%
!! TAAAGCTTCTTCTGAAGCTT+TGG + chr4.4:67504254-67504273 None:intergenic 35.0%
!! TATACCGATGAAAGAGTATC+CGG - chr4.4:67504274-67504293 MS.gene77682:CDS 35.0%
!! TCATCCTAGTATTGATTGTC+CGG - chr4.4:67504724-67504743 MS.gene77682:CDS 35.0%
!! TTAGGGATGAAGAGTATTGT+AGG - chr4.4:67504606-67504625 MS.gene77682:CDS 35.0%
!!! AGGTTTTGAATGAGCATAAG+AGG - chr4.4:67504546-67504565 MS.gene77682:CDS 35.0%
AAACCATCATCCTCAAGAGT+GGG + chr4.4:67504998-67505017 None:intergenic 40.0%
AATCCACTTCTCTCCGAAAA+CGG - chr4.4:67503750-67503769 MS.gene77682:CDS 40.0%
ACTATGTATCCTCCTATGCA+TGG - chr4.4:67505421-67505440 MS.gene77682:CDS 40.0%
ACTATTGCAGTAAGAGTTGC+TGG - chr4.4:67505178-67505197 MS.gene77682:CDS 40.0%
ACTGCATTATAGTAAGGTGG+AGG + chr4.4:67505676-67505695 None:intergenic 40.0%
CAGAATTTCTTGGCTGAGTT+GGG - chr4.4:67504785-67504804 MS.gene77682:CDS 40.0%
CAGGTTTGAGTAAAGGATAC+GGG - chr4.4:67505080-67505099 MS.gene77682:CDS 40.0%
CATTGTGTTCCCATACATGT+TGG + chr4.4:67505599-67505618 None:intergenic 40.0%
CATTTGCAATGCTGTGTGAT+TGG + chr4.4:67505735-67505754 None:intergenic 40.0%
CCAACATATCCTGCATCTTA+TGG - chr4.4:67505643-67505662 MS.gene77682:CDS 40.0%
CCAGATTCAAACGATCAGAA+CGG - chr4.4:67503876-67503895 MS.gene77682:CDS 40.0%
CCATAAGATGCAGGATATGT+TGG + chr4.4:67505646-67505665 None:intergenic 40.0%
CGAAGAAAAGGAAATCCAGA+TGG - chr4.4:67503916-67503935 MS.gene77682:CDS 40.0%
CGAATGACAGGTTTGAGTAA+AGG - chr4.4:67505073-67505092 MS.gene77682:CDS 40.0%
CTTTAGATGATCGTCCTGAA+GGG - chr4.4:67504066-67504085 MS.gene77682:CDS 40.0%
GAAACCCTAATTCCCCAAAA+CGG - chr4.4:67503675-67503694 MS.gene77682:CDS 40.0%
GGAACTGCATTATAGTAAGG+TGG + chr4.4:67505679-67505698 None:intergenic 40.0%
GGAGGAACTGCATTATAGTA+AGG + chr4.4:67505682-67505701 None:intergenic 40.0%
GGTATATTGTTGGGATGGAT+AGG + chr4.4:67505287-67505306 None:intergenic 40.0%
GTTGTCTTAATCGCAGATTC+AGG + chr4.4:67504821-67504840 None:intergenic 40.0%
TAAGATGCAGGATATGTTGG+TGG + chr4.4:67505643-67505662 None:intergenic 40.0%
TCAATACCACCCATGAAATC+AGG + chr4.4:67503975-67503994 None:intergenic 40.0%
TCAGAATTTCTTGGCTGAGT+TGG - chr4.4:67504784-67504803 MS.gene77682:CDS 40.0%
TCATTCAAAACCTCATCCAC+AGG + chr4.4:67504539-67504558 None:intergenic 40.0%
TTAAACGTCGAAGTCCTTGT+AGG + chr4.4:67504668-67504687 None:intergenic 40.0%
TTCACCGGACAATCAATACT+AGG + chr4.4:67504731-67504750 None:intergenic 40.0%
TTTAGATGATCGTCCTGAAG+GGG - chr4.4:67504067-67504086 MS.gene77682:CDS 40.0%
! AAGATTGTGATTCGGGGTAA+AGG - chr4.4:67504371-67504390 MS.gene77682:CDS 40.0%
! AGATTGTGATTCGGGGTAAA+GGG - chr4.4:67504372-67504391 MS.gene77682:CDS 40.0%
! AGTACTTTGGCAATTGGTTC+GGG - chr4.4:67504842-67504861 MS.gene77682:CDS 40.0%
! CTGGTGCTAAGATTGTGATT+CGG - chr4.4:67504363-67504382 MS.gene77682:CDS 40.0%
! GAGAGAAGTGGATTTGGAAT+CGG + chr4.4:67503744-67503763 None:intergenic 40.0%
! GAGGTTGTTTGTAAGCATTG+TGG - chr4.4:67504692-67504711 MS.gene77682:CDS 40.0%
! GGTTGTTTGTAAGCATTGTG+GGG - chr4.4:67504694-67504713 MS.gene77682:CDS 40.0%
! TGGTGCTAAGATTGTGATTC+GGG - chr4.4:67504364-67504383 MS.gene77682:CDS 40.0%
! TTTGGTGGTCTATAATCAGC+AGG + chr4.4:67504236-67504255 None:intergenic 40.0%
!! AGTATTGATTGTCCGGTGAA+GGG - chr4.4:67504731-67504750 MS.gene77682:CDS 40.0%
!! ATACCGATGAAAGAGTATCC+GGG - chr4.4:67504275-67504294 MS.gene77682:CDS 40.0%
!! GAAGAGTATTGTAGGTTGTG+TGG - chr4.4:67504614-67504633 MS.gene77682:CDS 40.0%
!! GGAAGTTGAATTACCGGTTT+CGG + chr4.4:67503954-67503973 None:intergenic 40.0%
!! TAGTATTGATTGTCCGGTGA+AGG - chr4.4:67504730-67504749 MS.gene77682:CDS 40.0%
!! TGGCTTTGAACAGGATAAGT+GGG + chr4.4:67505253-67505272 None:intergenic 40.0%
!! TGTGTGATTGGTCTGAAGTA+GGG + chr4.4:67505723-67505742 None:intergenic 40.0%
!! TTTTCGGAGAGAAGTGGATT+TGG + chr4.4:67503750-67503769 None:intergenic 40.0%
!! TTTTGGGGAATTAGGGTTTC+GGG + chr4.4:67503675-67503694 None:intergenic 40.0%
!!! GGATTTGCATGTTTTGGTTG+AGG - chr4.4:67504457-67504476 MS.gene77682:CDS 40.0%
!!! GTTTTGGGGAATTAGGGTTT+CGG + chr4.4:67503676-67503695 None:intergenic 40.0%
!!! TTTGCATGTTTTGGTTGAGG+CGG - chr4.4:67504460-67504479 MS.gene77682:CDS 40.0%
ACCGACAAAGATCAATCAGG+CGG - chr4.4:67503801-67503820 MS.gene77682:CDS 45.0%
AGCATAAGAGGCAGCAACTT+AGG - chr4.4:67504558-67504577 MS.gene77682:CDS 45.0%
AGGCACATTTCCAATGCTCT+GGG + chr4.4:67505812-67505831 None:intergenic 45.0%
AGTACACCACAAGCTGGATT+AGG - chr4.4:67504914-67504933 MS.gene77682:CDS 45.0%
ATACATAGTTGATCCAGGCG+GGG + chr4.4:67505410-67505429 None:intergenic 45.0%
ATGAATGGCTATCGCCTTGA+GGG - chr4.4:67505151-67505170 MS.gene77682:CDS 45.0%
ATTCCCCAAAACGGCATCAA+CGG - chr4.4:67503684-67503703 MS.gene77682:CDS 45.0%
CAAACCATCATCCTCAAGAG+TGG + chr4.4:67504999-67505018 None:intergenic 45.0%
CAACTTCCTGATTTCATGGG+TGG - chr4.4:67503966-67503985 MS.gene77682:CDS 45.0%
CCGTTCTGATCGTTTGAATC+TGG + chr4.4:67503879-67503898 None:intergenic 45.0%
CCTTCAGGACGATCATCTAA+AGG + chr4.4:67504068-67504087 None:intergenic 45.0%
CCTTTAGATGATCGTCCTGA+AGG - chr4.4:67504065-67504084 MS.gene77682:CDS 45.0%
CTCTCCGAAAACGGTTTAAC+CGG - chr4.4:67503759-67503778 MS.gene77682:CDS 45.0%
GAACCAGAATTGTTAGCCCA+AGG + chr4.4:67504887-67504906 None:intergenic 45.0%
GACTTCGACGTTTAAGAGTG+AGG - chr4.4:67504673-67504692 MS.gene77682:CDS 45.0%
GATACATAGTTGATCCAGGC+GGG + chr4.4:67505411-67505430 None:intergenic 45.0%
GATCGTTTGAATCTGGCTGT+GGG + chr4.4:67503872-67503891 None:intergenic 45.0%
GCATAAGAGGCAGCAACTTA+GGG - chr4.4:67504559-67504578 MS.gene77682:CDS 45.0%
GCATAAGGATTGTATGGAGG+AGG + chr4.4:67505382-67505401 None:intergenic 45.0%
GCATTATAGTAAGGTGGAGG+AGG + chr4.4:67505673-67505692 None:intergenic 45.0%
GGAACCGACAAAGATCAATC+AGG - chr4.4:67503798-67503817 MS.gene77682:CDS 45.0%
GGAGCATAAGGATTGTATGG+AGG + chr4.4:67505385-67505404 None:intergenic 45.0%
GGAGGATACATAGTTGATCC+AGG + chr4.4:67505415-67505434 None:intergenic 45.0%
GGAGGATATCCATAAGATGC+AGG + chr4.4:67505655-67505674 None:intergenic 45.0%
GGATACATAGTTGATCCAGG+CGG + chr4.4:67505412-67505431 None:intergenic 45.0%
GGATTGTATGGAGGAGGAAT+AGG + chr4.4:67505376-67505395 None:intergenic 45.0%
GGTGCTAAGATTGTGATTCG+GGG - chr4.4:67504365-67504384 MS.gene77682:CDS 45.0%
GTACACCACAAGCTGGATTA+GGG - chr4.4:67504915-67504934 MS.gene77682:CDS 45.0%
GTGTTCCCATACATGTTGGT+CGG + chr4.4:67505595-67505614 None:intergenic 45.0%
TACCCCGGATACTCTTTCAT+CGG + chr4.4:67504281-67504300 None:intergenic 45.0%
TACTCAGAAGAGGATGGAGA+AGG - chr4.4:67504337-67504356 MS.gene77682:CDS 45.0%
TATGCCTCCTCCTAACTCAT+CGG - chr4.4:67505837-67505856 MS.gene77682:CDS 45.0%
TCCGCCTGATTGATCTTTGT+CGG + chr4.4:67503805-67503824 None:intergenic 45.0%
TGATCGTTTGAATCTGGCTG+TGG + chr4.4:67503873-67503892 None:intergenic 45.0%
TGCAAATCCTCATTCTCCGA+CGG + chr4.4:67504446-67504465 None:intergenic 45.0%
TGGGCTTATTATTGGGCCTA+GGG - chr4.4:67504310-67504329 MS.gene77682:CDS 45.0%
TTATTATCAGACTGCACCCC+AGG + chr4.4:67505553-67505572 None:intergenic 45.0%
TTGGGCTTATTATTGGGCCT+AGG - chr4.4:67504309-67504328 MS.gene77682:CDS 45.0%
TTGTATGGAGGAGGAATAGG+AGG + chr4.4:67505373-67505392 None:intergenic 45.0%
! AAACCGTTTTCGGAGAGAAG+TGG + chr4.4:67503756-67503775 None:intergenic 45.0%
! AATTTCTTGGCTGAGTTGGG+TGG - chr4.4:67504788-67504807 MS.gene77682:CDS 45.0%
! AGAAGTGGATTTGGAATCGG+TGG + chr4.4:67503741-67503760 None:intergenic 45.0%
! ATAGGTTGACCATGCATAGG+AGG + chr4.4:67505433-67505452 None:intergenic 45.0%
! CTGTACCGACCAACATGTAT+GGG - chr4.4:67505587-67505606 MS.gene77682:CDS 45.0%
! GCAGAAGAGGGATTTGAAAC+CGG - chr4.4:67504418-67504437 MS.gene77682:CDS 45.0%
! GGAGGAGCATAAGGATTGTA+TGG + chr4.4:67505388-67505407 None:intergenic 45.0%
! GGATTTCCTTTTCTTCGTCC+CGG + chr4.4:67503913-67503932 None:intergenic 45.0%
! GTTTGTAAGCATTGTGGGGA+TGG - chr4.4:67504698-67504717 MS.gene77682:CDS 45.0%
! TACACCACAAGCTGGATTAG+GGG - chr4.4:67504916-67504935 MS.gene77682:CDS 45.0%
! TCTGTACCGACCAACATGTA+TGG - chr4.4:67505586-67505605 MS.gene77682:CDS 45.0%
! TGAACACCATAAGGAGGCAT+AGG + chr4.4:67505451-67505470 None:intergenic 45.0%
! TTCTGGAAGCAATCCTCCTT+GGG - chr4.4:67504868-67504887 MS.gene77682:CDS 45.0%
!! AGCTTCTTCTGAAGCTTTGG+TGG + chr4.4:67504251-67504270 None:intergenic 45.0%
!! CTGGCTTTGAACAGGATAAG+TGG + chr4.4:67505254-67505273 None:intergenic 45.0%
!! CTGTGTGATTGGTCTGAAGT+AGG + chr4.4:67505724-67505743 None:intergenic 45.0%
!! GCTAACAATTCTGGTTCTGG+TGG - chr4.4:67504890-67504909 MS.gene77682:CDS 45.0%
!! GGCTTTGAATGGGACGATTA+GGG - chr4.4:67504589-67504608 MS.gene77682:CDS 45.0%
!! GGGTATTGAACACCATAAGG+AGG + chr4.4:67505457-67505476 None:intergenic 45.0%
!! GGTGGGTATTGAACACCATA+AGG + chr4.4:67505460-67505479 None:intergenic 45.0%
!! GTGTGATTGGTCTGAAGTAG+GGG + chr4.4:67505722-67505741 None:intergenic 45.0%
!! GTTTCGGGTTTATCGTTGAG+CGG + chr4.4:67503660-67503679 None:intergenic 45.0%
!! TACCGATGAAAGAGTATCCG+GGG - chr4.4:67504276-67504295 MS.gene77682:CDS 45.0%
!! TGGACGTGAATCGGTGTTAT+CGG + chr4.4:67503721-67503740 None:intergenic 45.0%
!! TGGGCTAACAATTCTGGTTC+TGG - chr4.4:67504887-67504906 MS.gene77682:CDS 45.0%
!!! GATGCCGTTTTGGGGAATTA+GGG + chr4.4:67503682-67503701 None:intergenic 45.0%
!!! TGATGCCGTTTTGGGGAATT+AGG + chr4.4:67503683-67503702 None:intergenic 45.0%
!!! TGTTTTGGTTGAGGCGGATA+CGG - chr4.4:67504466-67504485 MS.gene77682:CDS 45.0%
AAGAGGATGGAGAAGGAGAC+TGG - chr4.4:67504344-67504363 MS.gene77682:CDS 50.0%
AAGGGTCGGTGAAAGAAGGT+AGG - chr4.4:67504390-67504409 MS.gene77682:CDS 50.0%
AAGGTAGGTTGCAGCAGAAG+AGG - chr4.4:67504405-67504424 MS.gene77682:CDS 50.0%
ACAGCATTGCAAATGCGCCT+TGG - chr4.4:67505740-67505759 MS.gene77682:CDS 50.0%
ACCGCCACCGGTATATTGTT+GGG + chr4.4:67505296-67505315 None:intergenic 50.0%
AGGTAGGTTGCAGCAGAAGA+GGG - chr4.4:67504406-67504425 MS.gene77682:CDS 50.0%
ATGCAGCAGAATTACCCTCC+TGG - chr4.4:67505532-67505551 MS.gene77682:CDS 50.0%
ATGGATAGGCACCAATTGGC+TGG + chr4.4:67505273-67505292 None:intergenic 50.0%
CAGCATTGCAAATGCGCCTT+GGG - chr4.4:67505741-67505760 MS.gene77682:CDS 50.0%
CATGAATGGCTATCGCCTTG+AGG - chr4.4:67505150-67505169 MS.gene77682:CDS 50.0%
CCACCGGTATATTGTTGGGA+TGG + chr4.4:67505292-67505311 None:intergenic 50.0%
CCAGAATTGTTAGCCCAAGG+AGG + chr4.4:67504884-67504903 None:intergenic 50.0%
CCATCCCAACAATATACCGG+TGG - chr4.4:67505289-67505308 MS.gene77682:CDS 50.0%
CCTCCTTGGGCTAACAATTC+TGG - chr4.4:67504881-67504900 MS.gene77682:CDS 50.0%
CCTGTTCAAAGCCAGCCAAT+TGG - chr4.4:67505259-67505278 MS.gene77682:CDS 50.0%
CTAGGGGGAATACTCAGAAG+AGG - chr4.4:67504327-67504346 MS.gene77682:CDS 50.0%
CTCAAGGCGATAGCCATTCA+TGG + chr4.4:67505152-67505171 None:intergenic 50.0%
CTCTTCTGAGTATTCCCCCT+AGG + chr4.4:67504329-67504348 None:intergenic 50.0%
CTGCAATAGTTCGACCCTCA+AGG + chr4.4:67505168-67505187 None:intergenic 50.0%
CTGCATTTCACCAGAAGCAG+GGG + chr4.4:67505518-67505537 None:intergenic 50.0%
GAGGCACATTTCCAATGCTC+TGG + chr4.4:67505813-67505832 None:intergenic 50.0%
GATTGATCTGCAGACGAAGG+AGG + chr4.4:67505790-67505809 None:intergenic 50.0%
GCAGATCAATCCCAGAGCAT+TGG - chr4.4:67505799-67505818 MS.gene77682:CDS 50.0%
GCTGCATTTCACCAGAAGCA+GGG + chr4.4:67505519-67505538 None:intergenic 50.0%
GGCTTATTATTGGGCCTAGG+GGG - chr4.4:67504312-67504331 MS.gene77682:CDS 50.0%
GGGCTTATTATTGGGCCTAG+GGG - chr4.4:67504311-67504330 MS.gene77682:CDS 50.0%
GGGGAATACTCAGAAGAGGA+TGG - chr4.4:67504331-67504350 MS.gene77682:CDS 50.0%
GGTAAAGGGTCGGTGAAAGA+AGG - chr4.4:67504386-67504405 MS.gene77682:CDS 50.0%
GGTCAACCTATGCCTCCTTA+TGG - chr4.4:67505442-67505461 MS.gene77682:CDS 50.0%
GGTGGTCTATAATCAGCAGG+TGG + chr4.4:67504233-67504252 None:intergenic 50.0%
GGTTTATCGTTGAGCGGTAG+TGG + chr4.4:67503654-67503673 None:intergenic 50.0%
GTATTTGCCACCCACTCTTG+AGG - chr4.4:67504985-67505004 MS.gene77682:CDS 50.0%
TACATAGTTGATCCAGGCGG+GGG + chr4.4:67505409-67505428 None:intergenic 50.0%
TCAGCAGGTGGCTTAAAAGC+AGG + chr4.4:67504221-67504240 None:intergenic 50.0%
TCCCAACAATATACCGGTGG+CGG - chr4.4:67505292-67505311 MS.gene77682:CDS 50.0%
TCCGAAAACGGTTTAACCGG+CGG - chr4.4:67503762-67503781 MS.gene77682:CDS 50.0%
TCGGCGGAAAAGACGTCATA+TGG - chr4.4:67505856-67505875 MS.gene77682:CDS 50.0%
TGCAGCAGAATTACCCTCCT+GGG - chr4.4:67505533-67505552 MS.gene77682:CDS 50.0%
TGCATTTCACCAGAAGCAGG+GGG + chr4.4:67505517-67505536 None:intergenic 50.0%
TGCTGCATTTCACCAGAAGC+AGG + chr4.4:67505520-67505539 None:intergenic 50.0%
TGGAATCGGTGGACGTGAAT+CGG + chr4.4:67503730-67503749 None:intergenic 50.0%
TGGGATGGATAGGCACCAAT+TGG + chr4.4:67505277-67505296 None:intergenic 50.0%
TGGGATTGATCTGCAGACGA+AGG + chr4.4:67505793-67505812 None:intergenic 50.0%
! GATGAGTTAGGAGGAGGCAT+AGG + chr4.4:67505838-67505857 None:intergenic 50.0%
! GGATTTGAAACCGGATCCGT+CGG - chr4.4:67504427-67504446 MS.gene77682:CDS 50.0%
! GGCATAGGTTGACCATGCAT+AGG + chr4.4:67505436-67505455 None:intergenic 50.0%
! GTCTTTTCCGCCGATGAGTT+AGG + chr4.4:67505850-67505869 None:intergenic 50.0%
! TGTAAGCATTGTGGGGATGG+TGG - chr4.4:67504701-67504720 MS.gene77682:CDS 50.0%
! TGTGATTCGGGGTAAAGGGT+CGG - chr4.4:67504376-67504395 MS.gene77682:CDS 50.0%
! TTTCCTTTTCTTCGTCCCGG+TGG + chr4.4:67503910-67503929 None:intergenic 50.0%
! TTTTCCGCCGATGAGTTAGG+AGG + chr4.4:67505847-67505866 None:intergenic 50.0%
!! ACGTGAATCGGTGTTATCGG+TGG + chr4.4:67503718-67503737 None:intergenic 50.0%
!! ATCGTTGAGCGGTAGTGGAT+TGG + chr4.4:67503649-67503668 None:intergenic 50.0%
!! ATCTTTGTCGGTTCCGCTTC+GGG + chr4.4:67503793-67503812 None:intergenic 50.0%
!! CCAATTGGCTGGCTTTGAAC+AGG + chr4.4:67505262-67505281 None:intergenic 50.0%
!! CGGCTTTGAATGGGACGATT+AGG - chr4.4:67504588-67504607 MS.gene77682:CDS 50.0%
!! GATCTTTGTCGGTTCCGCTT+CGG + chr4.4:67503794-67503813 None:intergenic 50.0%
!! GTTCTGGAAGCAATCCTCCT+TGG - chr4.4:67504867-67504886 MS.gene77682:CDS 50.0%
!! TGAATCGGTGTTATCGGTGG+TGG + chr4.4:67503715-67503734 None:intergenic 50.0%
AATCTGGCTGTGGGTCCCAT+CGG + chr4.4:67503863-67503882 None:intergenic 55.0%
AGGAGGGGCGGAATGATTAC+TGG + chr4.4:67505767-67505786 None:intergenic 55.0%
AGTGCTCCTCCTGGGAGTTA+TGG - chr4.4:67505325-67505344 MS.gene77682:CDS 55.0%
ATTTCACCAGAAGCAGGGGG+TGG + chr4.4:67505514-67505533 None:intergenic 55.0%
CCACCCACTCTTGAGGATGA+TGG - chr4.4:67504992-67505011 MS.gene77682:CDS 55.0%
CCATCATCCTCAAGAGTGGG+TGG + chr4.4:67504995-67505014 None:intergenic 55.0%
GAAGGAGATCTAGCCCCTTC+AGG + chr4.4:67504083-67504102 None:intergenic 55.0%
GACCGCCACCGGTATATTGT+TGG + chr4.4:67505297-67505316 None:intergenic 55.0%
GAGGAATAGGAGGTCCCCAT+GGG + chr4.4:67505363-67505382 None:intergenic 55.0%
GCAGCAACTTAGGGAGCTTG+CGG - chr4.4:67504568-67504587 MS.gene77682:CDS 55.0%
GCAGCAGAATTACCCTCCTG+GGG - chr4.4:67505534-67505553 MS.gene77682:CDS 55.0%
GCGGAATGATTACTGGCCCA+AGG + chr4.4:67505760-67505779 None:intergenic 55.0%
GCTATTGCAGCCTGTGGATG+AGG - chr4.4:67504526-67504545 MS.gene77682:CDS 55.0%
GGAGAAGCTATTGCAGCCTG+TGG - chr4.4:67504520-67504539 MS.gene77682:CDS 55.0%
GGCAGTATGCGTGTCCTACA+AGG - chr4.4:67504651-67504670 MS.gene77682:CDS 55.0%
GGTGGTAGTACACCACAAGC+TGG - chr4.4:67504908-67504927 MS.gene77682:CDS 55.0%
GTAGGTTGTGTGGTGAGCCT+GGG - chr4.4:67504624-67504643 MS.gene77682:CDS 55.0%
TATCAGACTGCACCCCAGGA+GGG + chr4.4:67505549-67505568 None:intergenic 55.0%
TCCTCATTCTCCGACGGATC+CGG + chr4.4:67504440-67504459 None:intergenic 55.0%
TGATCTGCAGACGAAGGAGG+AGG + chr4.4:67505787-67505806 None:intergenic 55.0%
TGTAGGTTGTGTGGTGAGCC+TGG - chr4.4:67504623-67504642 MS.gene77682:CDS 55.0%
TTATCAGACTGCACCCCAGG+AGG + chr4.4:67505550-67505569 None:intergenic 55.0%
TTCCCAGTAGCACCCTTCAC+CGG + chr4.4:67504746-67504765 None:intergenic 55.0%
TTTCACCAGAAGCAGGGGGT+GGG + chr4.4:67505513-67505532 None:intergenic 55.0%
! AGGGGCTGGTGCGGTTAAAA+AGG - chr4.4:67504934-67504953 MS.gene77682:CDS 55.0%
! GAGTTAGGAGGAGGCATAGG+TGG + chr4.4:67505835-67505854 None:intergenic 55.0%
! GGATATGTTGGTGGAGCTGC+TGG + chr4.4:67505634-67505653 None:intergenic 55.0%
! GGCTGATGACGAACCGAAAC+CGG - chr4.4:67503938-67503957 MS.gene77682:CDS 55.0%
! TATGTTGGTGGAGCTGCTGG+TGG + chr4.4:67505631-67505650 None:intergenic 55.0%
! TTAGGAGGAGGCATAGGTGG+AGG + chr4.4:67505832-67505851 None:intergenic 55.0%
!! AGGGAGCTTGCGGCTTTGAA+TGG - chr4.4:67504578-67504597 MS.gene77682:CDS 55.0%
!! ATCGGTGTTATCGGTGGTGG+TGG + chr4.4:67503712-67503731 None:intergenic 55.0%
!! GAGAGTATCGTGCTCGTGAG+AGG - chr4.4:67504147-67504166 MS.gene77682:CDS 55.0%
!! GATTGGTCTGAAGTAGGGGC+AGG + chr4.4:67505718-67505737 None:intergenic 55.0%
!! GCAATTGGTTCGGGCAGTTC+TGG - chr4.4:67504851-67504870 MS.gene77682:CDS 55.0%
!! GCCGCCGGTTAAACCGTTTT+CGG + chr4.4:67503766-67503785 None:intergenic 55.0%
!! GGGAGCTTGCGGCTTTGAAT+GGG - chr4.4:67504579-67504598 MS.gene77682:CDS 55.0%
!! GGGTGCTACTGGGAAGAAGA+TGG - chr4.4:67504751-67504770 MS.gene77682:CDS 55.0%
!!! GGTGCCGTTGATGCCGTTTT+GGG + chr4.4:67503691-67503710 None:intergenic 55.0%
!!! GTGCCGTTGATGCCGTTTTG+GGG + chr4.4:67503690-67503709 None:intergenic 55.0%
!!! TGGTGCCGTTGATGCCGTTT+TGG + chr4.4:67503692-67503711 None:intergenic 55.0%
AACGACGCCGTAGAAGCCGA+TGG - chr4.4:67503844-67503863 MS.gene77682:CDS 60.0%
ACCGGATCCGTCGGAGAATG+AGG - chr4.4:67504436-67504455 MS.gene77682:CDS 60.0%
ACGACGCCGTAGAAGCCGAT+GGG - chr4.4:67503845-67503864 MS.gene77682:CDS 60.0%
ATAGGAGGTCCCCATGGGAC+AGG + chr4.4:67505358-67505377 None:intergenic 60.0%
ATAGTTGATCCAGGCGGGGG+AGG + chr4.4:67505406-67505425 None:intergenic 60.0%
CAATACCCACCCATGCCGAC+AGG - chr4.4:67505469-67505488 MS.gene77682:CDS 60.0%
CCAGCCCCTAATCCAGCTTG+TGG + chr4.4:67504923-67504942 None:intergenic 60.0%
CCTCAGCCTGTTGTACCTCC+AGG - chr4.4:67505208-67505227 MS.gene77682:CDS 60.0%
CGGTTCGTCATCAGCCCATC+TGG + chr4.4:67503934-67503953 None:intergenic 60.0%
CTGCAGACGAAGGAGGAGGA+GGG + chr4.4:67505783-67505802 None:intergenic 60.0%
GCCTCCTCCTAACTCATCGG+CGG - chr4.4:67505840-67505859 MS.gene77682:CDS 60.0%
GCTCCTCCTGGGAGTTATGG+AGG - chr4.4:67505328-67505347 MS.gene77682:CDS 60.0%
GGAGGAATAGGAGGTCCCCA+TGG + chr4.4:67505364-67505383 None:intergenic 60.0%
GGATACGGCTGATGCGCTTG+AGG - chr4.4:67504481-67504500 MS.gene77682:CDS 60.0%
GTGCCTCCATAACTCCCAGG+AGG + chr4.4:67505334-67505353 None:intergenic 60.0%
TCCGCCGATGAGTTAGGAGG+AGG + chr4.4:67505844-67505863 None:intergenic 60.0%
TCTGCAGACGAAGGAGGAGG+AGG + chr4.4:67505784-67505803 None:intergenic 60.0%
TGCAGACGAAGGAGGAGGAG+GGG + chr4.4:67505782-67505801 None:intergenic 60.0%
TGTGTGGTGAGCCTGGGCAT+CGG - chr4.4:67504630-67504649 MS.gene77682:CDS 60.0%
TTCACCAGAAGCAGGGGGTG+GGG + chr4.4:67505512-67505531 None:intergenic 60.0%
! AGCTGGATTAGGGGCTGGTG+CGG - chr4.4:67504925-67504944 MS.gene77682:CDS 60.0%
! ATACCGGTGGCGGTCCCATT+GGG - chr4.4:67505302-67505321 MS.gene77682:CDS 60.0%
! CCACAAGCTGGATTAGGGGC+TGG - chr4.4:67504920-67504939 MS.gene77682:CDS 60.0%
! CCTGGAGGTACAACAGGCTG+AGG + chr4.4:67505211-67505230 None:intergenic 60.0%
! CCTTTTCTTCGTCCCGGTGG+CGG + chr4.4:67503907-67503926 None:intergenic 60.0%
! GGAGCTGCTGGTGGCATTGA+AGG + chr4.4:67505622-67505641 None:intergenic 60.0%
! GGAGGTACAACAGGCTGAGG+AGG + chr4.4:67505208-67505227 None:intergenic 60.0%
! GGAGTGCCTCCATAACTCCC+AGG + chr4.4:67505337-67505356 None:intergenic 60.0%
! GGTCTGAAGTAGGGGCAGGA+GGG + chr4.4:67505714-67505733 None:intergenic 60.0%
! GTCTGAAGTAGGGGCAGGAG+GGG + chr4.4:67505713-67505732 None:intergenic 60.0%
! TATACCGGTGGCGGTCCCAT+TGG - chr4.4:67505301-67505320 MS.gene77682:CDS 60.0%
! TCTGAAGTAGGGGCAGGAGG+GGG + chr4.4:67505712-67505731 None:intergenic 60.0%
! TGGTCTGAAGTAGGGGCAGG+AGG + chr4.4:67505715-67505734 None:intergenic 60.0%
!! ATGGAGGCACTCCTGTCCCA+TGG - chr4.4:67505344-67505363 MS.gene77682:CDS 60.0%
!! CCAGGAGGAGCACTCCCAAT+GGG + chr4.4:67505319-67505338 None:intergenic 60.0%
!! CCATTGGGAGTGCTCCTCCT+GGG - chr4.4:67505317-67505336 MS.gene77682:CDS 60.0%
!! GTCCGGTGAAGGGTGCTACT+GGG - chr4.4:67504741-67504760 MS.gene77682:CDS 60.0%
!! GTGGGTCCCATCGGCTTCTA+CGG + chr4.4:67503854-67503873 None:intergenic 60.0%
!! TGGAGGCACTCCTGTCCCAT+GGG - chr4.4:67505345-67505364 MS.gene77682:CDS 60.0%
!! TGTCCGGTGAAGGGTGCTAC+TGG - chr4.4:67504740-67504759 MS.gene77682:CDS 60.0%
ACTCCCAATGGGACCGCCAC+CGG + chr4.4:67505308-67505327 None:intergenic 65.0%
AGACGAAGGAGGAGGAGGGG+CGG + chr4.4:67505779-67505798 None:intergenic 65.0%
CACGCATACTGCCGATGCCC+AGG + chr4.4:67504644-67504663 None:intergenic 65.0%
CCGCCACCGGGACGAAGAAA+AGG - chr4.4:67503904-67503923 MS.gene77682:CDS 65.0%
GCTTGAGGCTGCGGCTGGTA+TGG - chr4.4:67504496-67504515 MS.gene77682:CDS 65.0%
GGCTGATGCGCTTGAGGCTG+CGG - chr4.4:67504487-67504506 MS.gene77682:CDS 65.0%
TAAGTGGGCACAGCCGACGC+AGG + chr4.4:67505238-67505257 None:intergenic 65.0%
TCACCAGAAGCAGGGGGTGG+GGG + chr4.4:67505511-67505530 None:intergenic 65.0%
TGAGGCTGCGGCTGGTATGG+TGG - chr4.4:67504499-67504518 MS.gene77682:CDS 65.0%
! GGTGGGCCTGGAGGTACAAC+AGG + chr4.4:67505217-67505236 None:intergenic 65.0%
!! CCCAGGAGGAGCACTCCCAA+TGG + chr4.4:67505320-67505339 None:intergenic 65.0%
!! CCCATTGGGAGTGCTCCTCC+TGG - chr4.4:67505316-67505335 MS.gene77682:CDS 65.0%
!! GGAGGCACTCCTGTCCCATG+GGG - chr4.4:67505346-67505365 MS.gene77682:CDS 65.0%
ACCAGGGGGACCTGTCGGCA+TGG + chr4.4:67505482-67505501 None:intergenic 70.0%
ACCGGCGGCAACACCCGAAG+CGG - chr4.4:67503777-67503796 MS.gene77682:CDS 70.0%
ACCTCCAGGCCCACCTGCGT+CGG - chr4.4:67505222-67505241 MS.gene77682:CDS 70.0%
ACTCCCCCACCCCCTGCTTC+TGG - chr4.4:67505505-67505524 MS.gene77682:CDS 70.0%
AGAACGGCGAAGCCGCCACC+GGG - chr4.4:67503892-67503911 MS.gene77682:CDS 70.0%
AGAAGCAGGGGGTGGGGGAG+TGG + chr4.4:67505506-67505525 None:intergenic 70.0%
CAGAACGGCGAAGCCGCCAC+CGG - chr4.4:67503891-67503910 MS.gene77682:CDS 70.0%
CCAGGGGGACCTGTCGGCAT+GGG + chr4.4:67505481-67505500 None:intergenic 70.0%
CCTTATGCTCCTCCCCCGCC+TGG - chr4.4:67505394-67505413 MS.gene77682:CDS 70.0%
GAAGTAGGGGCAGGAGGGGG+AGG + chr4.4:67505709-67505728 None:intergenic 70.0%
GATGCGCTTGAGGCTGCGGC+TGG - chr4.4:67504491-67504510 MS.gene77682:CDS 70.0%
GGGGACCTGTCGGCATGGGT+GGG + chr4.4:67505477-67505496 None:intergenic 70.0%
GTGGCACCAGGGGGACCTGT+CGG + chr4.4:67505487-67505506 None:intergenic 70.0%
TGGGCACAGCCGACGCAGGT+GGG + chr4.4:67505234-67505253 None:intergenic 70.0%
! CCAGGCGGGGGAGGAGCATA+AGG + chr4.4:67505397-67505416 None:intergenic 70.0%
! TCCGCTTCGGGTGTTGCCGC+CGG + chr4.4:67503781-67503800 None:intergenic 70.0%
ACAGCCGACGCAGGTGGGCC+TGG + chr4.4:67505229-67505248 None:intergenic 75.0%
CCCATGCCGACAGGTCCCCC+TGG - chr4.4:67505478-67505497 MS.gene77682:CDS 75.0%
GGGGGACCTGTCGGCATGGG+TGG + chr4.4:67505478-67505497 None:intergenic 75.0%
GGGGTGGGGGAGTGGCACCA+GGG + chr4.4:67505498-67505517 None:intergenic 75.0%
GGGTGGGGGAGTGGCACCAG+GGG + chr4.4:67505497-67505516 None:intergenic 75.0%
GGTGGGGGAGTGGCACCAGG+GGG + chr4.4:67505496-67505515 None:intergenic 75.0%
GTAGGGGCAGGAGGGGGAGG+TGG + chr4.4:67505706-67505725 None:intergenic 75.0%
GTGGGCACAGCCGACGCAGG+TGG + chr4.4:67505235-67505254 None:intergenic 75.0%
! GCAGGAGGGGGAGGTGGTGG+AGG + chr4.4:67505700-67505719 None:intergenic 75.0%
! GCCGACGCAGGTGGGCCTGG+AGG + chr4.4:67505226-67505245 None:intergenic 80.0%
! GGGGCAGGAGGGGGAGGTGG+TGG + chr4.4:67505703-67505722 None:intergenic 80.0%
! GGGGGTGGGGGAGTGGCACC+AGG + chr4.4:67505499-67505518 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 67503630 67505921 67503630 ID=MS.gene77682
chr4.4 mRNA 67503630 67505921 67503630 ID=MS.gene77682.t1;Parent=MS.gene77682
chr4.4 exon 67503630 67505921 67503630 ID=MS.gene77682.t1.exon1;Parent=MS.gene77682.t1
chr4.4 CDS 67503630 67505921 67503630 ID=cds.MS.gene77682.t1;Parent=MS.gene77682.t1
Gene Sequence

>MS.gene77682

ATGGAGGCTCTCGATTCCAATCCACTACCGCTCAACGATAAACCCGAAACCCTAATTCCCCAAAACGGCATCAACGGCACCACCACCACCGATAACACCGATTCACGTCCACCGATTCCAAATCCACTTCTCTCCGAAAACGGTTTAACCGGCGGCAACACCCGAAGCGGAACCGACAAAGATCAATCAGGCGGAGAAGAAGAAACAACAAGCAAACGACGCCGTAGAAGCCGATGGGACCCACAGCCAGATTCAAACGATCAGAACGGCGAAGCCGCCACCGGGACGAAGAAAAGGAAATCCAGATGGGCTGATGACGAACCGAAACCGGTAATTCAACTTCCTGATTTCATGGGTGGTATTGAATTTGATCCTGAAATTCAAACATTGAATAGTAGATTGCTTGAGATAAGTAGAATGTTGCAATCTGGTTTGCCTTTAGATGATCGTCCTGAAGGGGCTAGATCTCCTTCACCTGAACCTATATATGATAATATGGGGATTAGGATTAATACTAGAGAGTATCGTGCTCGTGAGAGGTTTCAGAAAGAGAGACAAGAGATTATTTCACAGATTATTAAGAAAAATCCTGCTTTTAAGCCACCTGCTGATTATAGACCACCAAAGCTTCAGAAGAAGCTTTATATACCGATGAAAGAGTATCCGGGGTATAATTTTATTGGGCTTATTATTGGGCCTAGGGGGAATACTCAGAAGAGGATGGAGAAGGAGACTGGTGCTAAGATTGTGATTCGGGGTAAAGGGTCGGTGAAAGAAGGTAGGTTGCAGCAGAAGAGGGATTTGAAACCGGATCCGTCGGAGAATGAGGATTTGCATGTTTTGGTTGAGGCGGATACGGCTGATGCGCTTGAGGCTGCGGCTGGTATGGTGGAGAAGCTATTGCAGCCTGTGGATGAGGTTTTGAATGAGCATAAGAGGCAGCAACTTAGGGAGCTTGCGGCTTTGAATGGGACGATTAGGGATGAAGAGTATTGTAGGTTGTGTGGTGAGCCTGGGCATCGGCAGTATGCGTGTCCTACAAGGACTTCGACGTTTAAGAGTGAGGTTGTTTGTAAGCATTGTGGGGATGGTGGTCATCCTAGTATTGATTGTCCGGTGAAGGGTGCTACTGGGAAGAAGATGGATGATGAGTATCAGAATTTCTTGGCTGAGTTGGGTGGTACAGTTCCTGAATCTGCGATTAAGACAACTAGTACTTTGGCAATTGGTTCGGGCAGTTCTGGAAGCAATCCTCCTTGGGCTAACAATTCTGGTTCTGGTGGTAGTACACCACAAGCTGGATTAGGGGCTGGTGCGGTTAAAAAGGAAATTGATGATACAAATTTGTACATTGGGTATTTGCCACCCACTCTTGAGGATGATGGTTTGATCCAATTGTTTCAACAATTTGGTGAGATTGTTATGGCAAAAGTTATTAAGGATCGAATGACAGGTTTGAGTAAAGGATACGGGTTTGTGAAGTATGCTGATATCACAATGGCAAACAATGCAATTGTTGCCATGAATGGCTATCGCCTTGAGGGTCGAACTATTGCAGTAAGAGTTGCTGGTAAGCCTCCTCAGCCTGTTGTACCTCCAGGCCCACCTGCGTCGGCTGTGCCCACTTATCCTGTTCAAAGCCAGCCAATTGGTGCCTATCCATCCCAACAATATACCGGTGGCGGTCCCATTGGGAGTGCTCCTCCTGGGAGTTATGGAGGCACTCCTGTCCCATGGGGACCTCCTATTCCTCCTCCATACAATCCTTATGCTCCTCCCCCGCCTGGATCAACTATGTATCCTCCTATGCATGGTCAACCTATGCCTCCTTATGGTGTTCAATACCCACCCATGCCGACAGGTCCCCCTGGTGCCACTCCCCCACCCCCTGCTTCTGGTGAAATGCAGCAGAATTACCCTCCTGGGGTGCAGTCTGATAATAATTCATCTACTCAGTCTGTACCGACCAACATGTATGGGAACACAATGCCTTCAATGCCACCAGCAGCTCCACCAACATATCCTGCATCTTATGGATATCCTCCTCCACCTTACTATAATGCAGTTCCTCCACCACCTCCCCCTCCTGCCCCTACTTCAGACCAATCACACAGCATTGCAAATGCGCCTTGGGCCAGTAATCATTCCGCCCCTCCTCCTCCTTCGTCTGCAGATCAATCCCAGAGCATTGGAAATGTGCCTCCACCTATGCCTCCTCCTAACTCATCGGCGGAAAAGACGTCATATGGAGCTGATTCTGAGTATGAGAAATTCATGGCAGAGATGAAATGA

Protein sequence

>MS.gene77682.t1

MEALDSNPLPLNDKPETLIPQNGINGTTTTDNTDSRPPIPNPLLSENGLTGGNTRSGTDKDQSGGEEETTSKRRRRSRWDPQPDSNDQNGEAATGTKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQTLNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERFQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTADALEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESAIKTTSTLAIGSGSSGSNPPWANNSGSGGSTPQAGLGAGAVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIVAMNGYRLEGRTIAVRVAGKPPQPVVPPGPPASAVPTYPVQSQPIGAYPSQQYTGGGPIGSAPPGSYGGTPVPWGPPIPPPYNPYAPPPPGSTMYPPMHGQPMPPYGVQYPPMPTGPPGATPPPPASGEMQQNYPPGVQSDNNSSTQSVPTNMYGNTMPSMPPAAPPTYPASYGYPPPPYYNAVPPPPPPPAPTSDQSHSIANAPWASNHSAPPPPSSADQSQSIGNVPPPMPPPNSSAEKTSYGADSEYEKFMAEMK