Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78591.t1 | XP_003626275.1 | 87.7 | 685 | 79 | 2 | 1 | 682 | 1 | 683 | 5.30E-248 | 867.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78591.t1 | Q8S9K3 | 30.4 | 253 | 132 | 8 | 128 | 375 | 93 | 306 | 2.0e-17 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78591.t1 | G7KYM5 | 87.7 | 685 | 79 | 2 | 1 | 682 | 1 | 683 | 3.8e-248 | 867.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene78591 | 0.847426 | 1.17E-59 | -1.69E-46 |
| MS.gene049824 | MS.gene78591 | 0.807947 | 3.94E-50 | -1.69E-46 |
| MS.gene050885 | MS.gene78591 | 0.945047 | 6.33E-104 | -1.69E-46 |
| MS.gene051363 | MS.gene78591 | 0.802705 | 4.94E-49 | -1.69E-46 |
| MS.gene052717 | MS.gene78591 | 0.830592 | 2.69E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene78591 | 0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene78591 | 0.824913 | 6.24E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene78591 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene78591 | 0.828985 | 6.63E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene78591 | 0.881839 | 1.72E-70 | -1.69E-46 |
| MS.gene056605 | MS.gene78591 | 0.876747 | 1.09E-68 | -1.69E-46 |
| MS.gene05689 | MS.gene78591 | 0.844882 | 5.74E-59 | -1.69E-46 |
| MS.gene059935 | MS.gene78591 | 0.855941 | 4.50E-62 | -1.69E-46 |
| MS.gene060830 | MS.gene78591 | 0.844096 | 9.34E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78591.t1 | MTR_7g113360 | 94.257 | 888 | 19 | 3 | 1 | 858 | 1 | 886 | 0.0 | 1689 |
| MS.gene78591.t1 | MTR_1g032260 | 38.507 | 335 | 127 | 8 | 122 | 406 | 59 | 364 | 3.41e-65 | 227 |
| MS.gene78591.t1 | MTR_6g069400 | 39.116 | 294 | 145 | 8 | 124 | 406 | 65 | 335 | 1.50e-52 | 191 |
| MS.gene78591.t1 | MTR_6g069400 | 47.222 | 72 | 34 | 2 | 333 | 402 | 335 | 404 | 2.70e-15 | 80.1 |
| MS.gene78591.t1 | MTR_6g069400 | 38.889 | 90 | 34 | 2 | 327 | 404 | 371 | 451 | 2.41e-11 | 67.4 |
| MS.gene78591.t1 | MTR_7g087047 | 34.615 | 286 | 135 | 9 | 125 | 406 | 78 | 315 | 2.22e-40 | 161 |
| MS.gene78591.t1 | MTR_7g087047 | 42.282 | 149 | 73 | 3 | 261 | 406 | 2 | 140 | 1.80e-30 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78591.t1 | AT1G55040 | 52.374 | 737 | 270 | 20 | 6 | 703 | 5 | 699 | 0.0 | 615 |
| MS.gene78591.t1 | AT1G70650 | 34.648 | 355 | 161 | 7 | 125 | 441 | 44 | 365 | 2.23e-59 | 210 |
| MS.gene78591.t1 | AT1G70650 | 33.333 | 363 | 155 | 7 | 125 | 441 | 44 | 365 | 4.02e-52 | 192 |
| MS.gene78591.t1 | AT1G48570 | 37.059 | 340 | 147 | 11 | 125 | 419 | 60 | 377 | 2.91e-51 | 187 |
| MS.gene78591.t1 | AT1G48570 | 51.351 | 74 | 36 | 0 | 333 | 406 | 364 | 437 | 2.84e-17 | 85.9 |
| MS.gene78591.t1 | AT5G17790 | 33.987 | 306 | 156 | 9 | 128 | 428 | 93 | 357 | 6.85e-36 | 146 |
Find 220 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAAATGGTGCAGGATTT+AGG | 0.123255 | 7.4:+3436978 | MS.gene78591:CDS |
| AAACAGGTTGTTCGGGAATT+TGG | 0.177849 | 7.4:-3436758 | None:intergenic |
| CTTGGGTTTGATCCTATTAA+TGG | 0.181047 | 7.4:+3437976 | MS.gene78591:CDS |
| AGAACCAAAGCTTAATTTCT+TGG | 0.211002 | 7.4:-3439538 | None:intergenic |
| CATGCTGCTTGTCTTAATTT+CGG | 0.227175 | 7.4:+3437065 | MS.gene78591:CDS |
| GAGAAGAAGGTTTAGGGTTT+GGG | 0.230724 | 7.4:-3436617 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.4:-3439827 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.4:-3439911 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.4:-3439995 | None:intergenic |
| AAGGTTTAGGGTTTGGGTTT+TGG | 0.252849 | 7.4:-3436611 | None:intergenic |
| GGATCGTCTCGGAAATCTTA+TGG | 0.256725 | 7.4:+3440068 | MS.gene78591:CDS |
| GCAGAGAGAGAAGAAGGTTT+AGG | 0.258649 | 7.4:-3436624 | None:intergenic |
| ATCACTGGAGGAGGGAGATT+TGG | 0.276652 | 7.4:-3438102 | None:intergenic |
| AGAATCTGCATATTCAAAAT+TGG | 0.286698 | 7.4:-3439019 | None:intergenic |
| AATAAAAGTAAAACAGCTTC+TGG | 0.290479 | 7.4:+3439354 | MS.gene78591:CDS |
| ATAAAATGGTGCAGGATTTA+GGG | 0.292247 | 7.4:+3436979 | MS.gene78591:CDS |
| TTCAGAAACAGAAGACTCTT+TGG | 0.299699 | 7.4:+3439287 | MS.gene78591:CDS |
| CAGAGAGAGAAGAAGGTTTA+GGG | 0.303482 | 7.4:-3436623 | None:intergenic |
| AAATCATCAAACCCTGTTCT+AGG | 0.305189 | 7.4:-3439177 | None:intergenic |
| TCCCGTCCAACACGTCTCTT+TGG | 0.323269 | 7.4:-3438165 | None:intergenic |
| AGAGAAGAAGGTTTAGGGTT+TGG | 0.323448 | 7.4:-3436618 | None:intergenic |
| AAAGGGAACAGACATGATTC+TGG | 0.325410 | 7.4:+3439642 | MS.gene78591:CDS |
| GAGGCAGGATATTCAAGTTT+TGG | 0.331296 | 7.4:+3437354 | MS.gene78591:CDS |
| GACCTCTGCCTTTCCTTCTC+TGG | 0.332244 | 7.4:-3439512 | None:intergenic |
| TATTCATCCAGGCAAAATAA+AGG | 0.336980 | 7.4:+3439624 | MS.gene78591:CDS |
| GAGGAAGGATGAAGATAAAA+TGG | 0.341906 | 7.4:+3436965 | MS.gene78591:CDS |
| ACCACCTTTCTGTCCACATT+GGG | 0.346893 | 7.4:-3437391 | None:intergenic |
| CCCAAGAGACAGTTGCTTCC+AGG | 0.351064 | 7.4:+3438628 | MS.gene78591:CDS |
| GACGAAGATGTTGTTGTTGT+TGG | 0.352381 | 7.4:-3436804 | None:intergenic |
| ATGCTGCTTGTCTTAATTTC+GGG | 0.354542 | 7.4:+3437066 | MS.gene78591:CDS |
| TAACAGCCAACCTGTGGAAT+TGG | 0.356893 | 7.4:+3436854 | MS.gene78591:CDS |
| TCATCATCCCGGAAATCTTA+TGG | 0.357332 | 7.4:+3439903 | MS.gene78591:CDS |
| TCGTCATCCCGGAAATCTTA+TGG | 0.358923 | 7.4:+3439987 | MS.gene78591:CDS |
| GGAGGAGGTTGTTTCACCTT+TGG | 0.362434 | 7.4:-3438138 | None:intergenic |
| GGATCATCCCGGAAATCTTA+TGG | 0.366429 | 7.4:+3439819 | MS.gene78591:CDS |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.4:-3439826 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.4:-3439910 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.4:-3439994 | None:intergenic |
| GGAGGGAGATTTGGATCAAT+AGG | 0.378515 | 7.4:-3438093 | None:intergenic |
| GATTCAATTGATGGAGAGAT+TGG | 0.383239 | 7.4:+3436917 | MS.gene78591:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.4:+3439839 | MS.gene78591:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.4:+3439923 | MS.gene78591:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.4:+3440007 | MS.gene78591:CDS |
| ACGCCCACCTGATGAATTCC+TGG | 0.384843 | 7.4:+3438870 | MS.gene78591:CDS |
| AGCTTCCATTCTTGAACTAC+TGG | 0.385556 | 7.4:-3439250 | None:intergenic |
| CTCTTCAACGAATTCGTGCT+TGG | 0.388472 | 7.4:+3436712 | MS.gene78591:CDS |
| GGAGGTTGTTTCACCTTTGG+TGG | 0.390138 | 7.4:-3438135 | None:intergenic |
| CTGCCCATCTTATTAAAGTT+AGG | 0.390467 | 7.4:-3438928 | None:intergenic |
| ATAATCAAGTTCATCTTCCT+TGG | 0.394846 | 7.4:-3439427 | None:intergenic |
| TAGAAATGCTAGAGGGTCTC+AGG | 0.395388 | 7.4:+3439758 | MS.gene78591:CDS |
| TCCTGGAAGCAACTGTCTCT+TGG | 0.396449 | 7.4:-3438629 | None:intergenic |
| AGGACTGATGATCCATTAAT+AGG | 0.396782 | 7.4:-3437988 | None:intergenic |
| TGGACCTAACTTTAATAAGA+TGG | 0.398446 | 7.4:+3438924 | MS.gene78591:CDS |
| GTCATCAAAGTCAAAATTCC+AGG | 0.409210 | 7.4:-3438971 | None:intergenic |
| AGGGTTTAAGAGGCGGCGTT+TGG | 0.411053 | 7.4:-3436559 | None:intergenic |
| TGTATTCTTGCGAACTGAAC+GGG | 0.412398 | 7.4:-3439391 | None:intergenic |
| GATTCTGAAACAGGTTGTTC+GGG | 0.413379 | 7.4:-3436765 | None:intergenic |
| TGATTCTGAAACAGGTTGTT+CGG | 0.413387 | 7.4:-3436766 | None:intergenic |
| AGAAGGAACTTTACTAAAGA+TGG | 0.415912 | 7.4:+3439666 | MS.gene78591:CDS |
| CCTGGAAGCAACTGTCTCTT+GGG | 0.416125 | 7.4:-3438628 | None:intergenic |
| TTTACTAAAGATGGAAAGTC+TGG | 0.419164 | 7.4:+3439675 | MS.gene78591:CDS |
| GACAGTTGCTTCCAGGAGAA+TGG | 0.419362 | 7.4:+3438635 | MS.gene78591:CDS |
| AACCCTGTTCTAGGTCTAGA+AGG | 0.422985 | 7.4:-3439168 | None:intergenic |
| CCAACCAAGAAATTAAGCTT+TGG | 0.427354 | 7.4:+3439534 | MS.gene78591:CDS |
| TCCATCAATTGAATCCATTC+CGG | 0.429098 | 7.4:-3436909 | None:intergenic |
| GATCGTCTCGGAAATCTTAT+GGG | 0.429943 | 7.4:+3440069 | MS.gene78591:CDS |
| GTCTTAATTTCGGGAAGGAC+CGG | 0.437259 | 7.4:+3437075 | MS.gene78591:CDS |
| CCAAAGCTTAATTTCTTGGT+TGG | 0.439853 | 7.4:-3439534 | None:intergenic |
| ACAGTTTAATAAATACAGTA+TGG | 0.440806 | 7.4:+3440160 | MS.gene78591:CDS |
| GGTGGTGGTGATTCTGAAAC+AGG | 0.440996 | 7.4:-3436774 | None:intergenic |
| GCCGGAATGGATTCAATTGA+TGG | 0.444180 | 7.4:+3436908 | MS.gene78591:CDS |
| AAGTTGAGAAATGGAAGAAT+GGG | 0.451734 | 7.4:-3436587 | None:intergenic |
| GGGATGATGTTGAGATGAAA+AGG | 0.451787 | 7.4:+3438184 | MS.gene78591:CDS |
| GGCAAGAGGTTTCCAATGCC+TGG | 0.456231 | 7.4:+3438953 | MS.gene78591:CDS |
| ATTCATCCAGGCAAAATAAA+GGG | 0.459718 | 7.4:+3439625 | MS.gene78591:CDS |
| GTTGTTGTTGGTGATGGTGG+TGG | 0.460900 | 7.4:-3436792 | None:intergenic |
| AAATCTTATGGGAATGATAG+AGG | 0.462034 | 7.4:+3440080 | MS.gene78591:CDS |
| TTGTGCATCCGTGGCCGGAA+TGG | 0.462193 | 7.4:+3436895 | MS.gene78591:CDS |
| TCGGTACATTCCCATTCTCC+TGG | 0.465682 | 7.4:-3438646 | None:intergenic |
| TCTGACGAAGATGGCAGTGC+TGG | 0.465695 | 7.4:+3439564 | MS.gene78591:CDS |
| CAACTGTCTCTTGGGACGCT+TGG | 0.467805 | 7.4:-3438620 | None:intergenic |
| GGTTGTTTCACCTTTGGTGG+AGG | 0.468414 | 7.4:-3438132 | None:intergenic |
| GTTGTTGGTGATGGTGGTGG+TGG | 0.468976 | 7.4:-3436789 | None:intergenic |
| GCGAAGAATAGGAGCGTCCC+AGG | 0.470297 | 7.4:+3439108 | MS.gene78591:CDS |
| GTTGTTGTTGTTGGTGATGG+TGG | 0.472841 | 7.4:-3436795 | None:intergenic |
| GATGTTGTTGTTGTTGGTGA+TGG | 0.474773 | 7.4:-3436798 | None:intergenic |
| GGTTCTGACTCTGACGAAGA+TGG | 0.475635 | 7.4:+3439555 | MS.gene78591:CDS |
| TTTCAGGTCGTTGTCGAGGC+AGG | 0.477432 | 7.4:+3437339 | MS.gene78591:intron |
| AAAGTCAAAATTCCAGGCAT+TGG | 0.477506 | 7.4:-3438965 | None:intergenic |
| TTTAAGGAAGCTTGTCCACC+TGG | 0.477767 | 7.4:+3437429 | MS.gene78591:CDS |
| ATGCGAATGCTACTGACACT+TGG | 0.481025 | 7.4:+3437958 | MS.gene78591:CDS |
| ACAGTTGCTTCCAGGAGAAT+GGG | 0.481216 | 7.4:+3438636 | MS.gene78591:CDS |
| GAAGTTGAGAAATGGAAGAA+TGG | 0.484391 | 7.4:-3436588 | None:intergenic |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7.4:-3439869 | None:intergenic |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7.4:-3439953 | None:intergenic |
| TAAATACAGTATGGATGAGA+AGG | 0.490347 | 7.4:+3440169 | MS.gene78591:CDS |
| TAGCATTTCTATAAGACTGC+CGG | 0.493085 | 7.4:-3439746 | None:intergenic |
| ACAGACTTCTGCTTCAAAAG+TGG | 0.494941 | 7.4:-3438018 | None:intergenic |
| GGACCTAACTTTAATAAGAT+GGG | 0.495914 | 7.4:+3438925 | MS.gene78591:CDS |
| TCTGAGATTGTACATGATGA+AGG | 0.496169 | 7.4:+3437011 | MS.gene78591:CDS |
| CAATGCTCGGCGTGTGGGGT+GGG | 0.496388 | 7.4:+3439074 | MS.gene78591:CDS |
| TATGAGCTAGAAACTGAAAC+AGG | 0.496805 | 7.4:+3439225 | MS.gene78591:CDS |
| GGTCCTTCTAGACCTAGAAC+AGG | 0.497216 | 7.4:+3439165 | MS.gene78591:CDS |
| GAATATGTTAATGCCGGTCC+CGG | 0.498620 | 7.4:+3439144 | MS.gene78591:CDS |
| GGCTACAAATCAAACATGTT+CGG | 0.500236 | 7.4:+3439702 | MS.gene78591:CDS |
| ACAATTGTTTCTCAAGCTGC+AGG | 0.501134 | 7.4:-3437881 | None:intergenic |
| TCTTCACCAATTCCACAGGT+TGG | 0.501674 | 7.4:-3436860 | None:intergenic |
| GGAATTTGTGCATCCGTGGC+CGG | 0.502110 | 7.4:+3436890 | MS.gene78591:CDS |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7.4:+3439862 | MS.gene78591:CDS |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7.4:+3439946 | MS.gene78591:CDS |
| AGGAACCAGTAGTTCAAGAA+TGG | 0.504785 | 7.4:+3439245 | MS.gene78591:CDS |
| TCCAAAGAGACGTGTTGGAC+GGG | 0.505665 | 7.4:+3438164 | MS.gene78591:CDS |
| AGCATTTCTATAAGACTGCC+GGG | 0.507044 | 7.4:-3439745 | None:intergenic |
| GTAGGCAGAAATTTGATGAC+AGG | 0.508546 | 7.4:+3440123 | MS.gene78591:CDS |
| ACAATGCTCGGCGTGTGGGG+TGG | 0.508676 | 7.4:+3439073 | MS.gene78591:CDS |
| TTCAAAACGACAATGGCGTT+CGG | 0.508901 | 7.4:+3436516 | None:intergenic |
| AAGGGAACAGACATGATTCT+GGG | 0.508952 | 7.4:+3439643 | MS.gene78591:CDS |
| AATTGAATCCATTCCGGCCA+CGG | 0.511781 | 7.4:-3436903 | None:intergenic |
| AAGCTTGTCCACCTGGATGA+AGG | 0.515198 | 7.4:+3437436 | MS.gene78591:CDS |
| GGATGAAGATAAAATGGTGC+AGG | 0.516341 | 7.4:+3436971 | MS.gene78591:CDS |
| GATAACAATGCTCGGCGTGT+GGG | 0.516457 | 7.4:+3439069 | MS.gene78591:CDS |
| GGATGATGTTGAGATGAAAA+GGG | 0.519453 | 7.4:+3438185 | MS.gene78591:CDS |
| TTTGAATATGCAGATTCTCA+TGG | 0.520470 | 7.4:+3439024 | MS.gene78591:CDS |
| TGTTCTAGGTCTAGAAGGAC+CGG | 0.521263 | 7.4:-3439163 | None:intergenic |
| TATTCGTCATCGTGGGACCC+TGG | 0.522679 | 7.4:-3439126 | None:intergenic |
| AAACAGAAGACTCTTTGGAC+TGG | 0.524393 | 7.4:+3439292 | MS.gene78591:CDS |
| TCTTTCTTCACCAATTCCAC+AGG | 0.527330 | 7.4:-3436864 | None:intergenic |
| CACTTACATCTCCTTCATCC+AGG | 0.527939 | 7.4:-3437447 | None:intergenic |
| AGACGAGCAGAGAGAGAAGA+AGG | 0.529212 | 7.4:-3436630 | None:intergenic |
| GCTTCAAAAGTGGCTTGTTG+AGG | 0.532551 | 7.4:-3438008 | None:intergenic |
| CCAACACGTCTCTTTGGACT+AGG | 0.532599 | 7.4:-3438159 | None:intergenic |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7.4:+3439856 | MS.gene78591:CDS |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7.4:+3439940 | MS.gene78591:CDS |
| TTTCTGCTGCCGACCAGAGA+AGG | 0.538950 | 7.4:+3439499 | MS.gene78591:CDS |
| AGGTCTAGAAGGACCGGGAC+CGG | 0.544783 | 7.4:-3439157 | None:intergenic |
| ATTCGTCATCGTGGGACCCT+GGG | 0.546845 | 7.4:-3439125 | None:intergenic |
| AACCACCTTTCTGTCCACAT+TGG | 0.551275 | 7.4:-3437392 | None:intergenic |
| TTTCTTCAGATAACAATGCT+CGG | 0.552686 | 7.4:+3439061 | MS.gene78591:CDS |
| CATCAAACCTCTTCTTATCA+CGG | 0.553176 | 7.4:-3439788 | None:intergenic |
| CGTCTCTTTGGACTAGGAGG+AGG | 0.557296 | 7.4:-3438153 | None:intergenic |
| GATGACAGGGAGCACGGCAG+AGG | 0.560359 | 7.4:+3440137 | MS.gene78591:CDS |
| AGATAACAATGCTCGGCGTG+TGG | 0.561943 | 7.4:+3439068 | MS.gene78591:CDS |
| TAAATGAGGCATATTCATCC+AGG | 0.563376 | 7.4:+3439613 | MS.gene78591:CDS |
| GAGGGTCTCGAGGAAATGAC+CGG | 0.565783 | 7.4:+3440099 | MS.gene78591:CDS |
| CATACCTCAACAAATCAAAC+CGG | 0.566974 | 7.4:-3437094 | None:intergenic |
| AAATACAGTATGGATGAGAA+GGG | 0.567899 | 7.4:+3440170 | MS.gene78591:CDS |
| TACATCTTTCTCTCGATCCA+AGG | 0.570204 | 7.4:+3439410 | MS.gene78591:CDS |
| TGCGAATGCTACTGACACTT+GGG | 0.570349 | 7.4:+3437959 | MS.gene78591:CDS |
| CATCAAATTTCTGCCTACTC+CGG | 0.570481 | 7.4:-3440118 | None:intergenic |
| GACCAGAGAAGGAAAGGCAG+AGG | 0.570783 | 7.4:+3439510 | MS.gene78591:CDS |
| ATGTATTCTTGCGAACTGAA+CGG | 0.571403 | 7.4:-3439392 | None:intergenic |
| GCAACTTCTTGAATTACAGA+AGG | 0.571871 | 7.4:+3438818 | MS.gene78591:CDS |
| CTGAGATTGTACATGATGAA+GGG | 0.573048 | 7.4:+3437012 | MS.gene78591:CDS |
| TGCTTGTCTTAATTTCGGGA+AGG | 0.576196 | 7.4:+3437070 | MS.gene78591:CDS |
| TGAAGATGATGACTTAAATG+AGG | 0.578584 | 7.4:+3439599 | MS.gene78591:CDS |
| CTCAGGGAAGTAACCGTGGT+CGG | 0.578926 | 7.4:+3440024 | MS.gene78591:CDS |
| GTCCAAAGAGACGTGTTGGA+CGG | 0.579399 | 7.4:+3438163 | MS.gene78591:CDS |
| TCTGGTCGGCAGCAGAAACA+TGG | 0.585007 | 7.4:-3439494 | None:intergenic |
| AAATTTGATGACAGGGAGCA+CGG | 0.585765 | 7.4:+3440131 | MS.gene78591:CDS |
| CCTAGTCCAAAGAGACGTGT+TGG | 0.588036 | 7.4:+3438159 | MS.gene78591:CDS |
| AGGACCGGTTTGATTTGTTG+AGG | 0.591868 | 7.4:+3437090 | MS.gene78591:CDS |
| AGGTGGAATTTGTGCATCCG+TGG | 0.592128 | 7.4:+3436886 | MS.gene78591:CDS |
| AAAGATGGAAAGTCTGGTGG+TGG | 0.592319 | 7.4:+3439681 | MS.gene78591:CDS |
| TCTGCCTTTCCTTCTCTGGT+CGG | 0.592904 | 7.4:-3439508 | None:intergenic |
| AACAGAAGACTCTTTGGACT+GGG | 0.595101 | 7.4:+3439293 | MS.gene78591:CDS |
| TAAGATGGGCAGTCGGCAAG+AGG | 0.595204 | 7.4:+3438939 | MS.gene78591:CDS |
| CTCGAGGAAATGACCGGAGT+AGG | 0.595253 | 7.4:+3440105 | MS.gene78591:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.4:+3439840 | MS.gene78591:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.4:+3439924 | MS.gene78591:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.4:+3440008 | MS.gene78591:CDS |
| CTTGAATTACAGAAGGAATG+TGG | 0.602047 | 7.4:+3438825 | MS.gene78591:CDS |
| ATAACAATGCTCGGCGTGTG+GGG | 0.604808 | 7.4:+3439070 | MS.gene78591:CDS |
| TAAAATTAACAGCCAACCTG+TGG | 0.604873 | 7.4:+3436848 | MS.gene78591:CDS |
| GCTGCCGACCAGAGAAGGAA+AGG | 0.607141 | 7.4:+3439504 | MS.gene78591:CDS |
| GAAGTAACCGTGATAAGAAG+AGG | 0.607183 | 7.4:+3439781 | MS.gene78591:CDS |
| AGAAATGCTAGAGGGTCTCA+GGG | 0.608421 | 7.4:+3439759 | MS.gene78591:CDS |
| ACAGACATGATTCTGGGAGA+AGG | 0.609668 | 7.4:+3439649 | MS.gene78591:CDS |
| CATCAAATCTCTTCCGACCA+CGG | 0.613295 | 7.4:-3440037 | None:intergenic |
| TTGATTTCAGGTCGTTGTCG+AGG | 0.613354 | 7.4:+3437335 | MS.gene78591:intron |
| AATCTTATGGGAATGATAGA+GGG | 0.615135 | 7.4:+3440081 | MS.gene78591:CDS |
| TTTCCAGGAATTCATCAGGT+GGG | 0.615174 | 7.4:-3438873 | None:intergenic |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.4:+3439832 | MS.gene78591:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.4:+3439916 | MS.gene78591:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.4:+3440000 | MS.gene78591:CDS |
| ATGCCCCAATGTGGACAGAA+AGG | 0.622449 | 7.4:+3437387 | MS.gene78591:CDS |
| CATTAACATATTCGTCATCG+TGG | 0.624458 | 7.4:-3439134 | None:intergenic |
| GATGATGTTGAGATGAAAAG+GGG | 0.632277 | 7.4:+3438186 | MS.gene78591:CDS |
| ACTAAAGATGGAAAGTCTGG+TGG | 0.633614 | 7.4:+3439678 | MS.gene78591:CDS |
| ACTTTAATAAGATGGGCAGT+CGG | 0.636668 | 7.4:+3438932 | MS.gene78591:CDS |
| CCCCAATGTGGACAGAAAGG+TGG | 0.638533 | 7.4:+3437390 | MS.gene78591:CDS |
| GCAGAAGTCTGTTAAAGCAG+TGG | 0.639008 | 7.4:+3438029 | MS.gene78591:CDS |
| AGTTGAGAAATGGAAGAATG+GGG | 0.640454 | 7.4:-3436586 | None:intergenic |
| CCACCTTTCTGTCCACATTG+GGG | 0.641456 | 7.4:-3437390 | None:intergenic |
| TAGGCAGAAATTTGATGACA+GGG | 0.644055 | 7.4:+3440124 | MS.gene78591:CDS |
| ATTAACATATTCGTCATCGT+GGG | 0.644202 | 7.4:-3439133 | None:intergenic |
| CAAACAAAGAGGACGAGGCA+CGG | 0.646878 | 7.4:+3437923 | MS.gene78591:CDS |
| TGTGGAATTGGTGAAGAAAG+AGG | 0.646891 | 7.4:+3436866 | MS.gene78591:CDS |
| GTTCTAGGTCTAGAAGGACC+GGG | 0.647939 | 7.4:-3439162 | None:intergenic |
| TTATCTGCTTACAAACAAAG+AGG | 0.648918 | 7.4:+3437912 | MS.gene78591:CDS |
| CAGTCTTATAGAAATGCTAG+AGG | 0.651109 | 7.4:+3439750 | MS.gene78591:CDS |
| TTTGATGACAATGAATCAGA+TGG | 0.653290 | 7.4:+3438985 | MS.gene78591:CDS |
| GGGAATGATAGAGGGTCTCG+AGG | 0.653470 | 7.4:+3440089 | MS.gene78591:CDS |
| TGATGTTGAGATGAAAAGGG+GGG | 0.656571 | 7.4:+3438188 | MS.gene78591:CDS |
| GATGACGAATATGTTAATGC+CGG | 0.658800 | 7.4:+3439138 | MS.gene78591:CDS |
| ACACGTCTCTTTGGACTAGG+AGG | 0.663410 | 7.4:-3438156 | None:intergenic |
| GCTTACAAACAAAGAGGACG+AGG | 0.663787 | 7.4:+3437918 | MS.gene78591:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.4:+3439831 | MS.gene78591:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.4:+3439915 | MS.gene78591:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.4:+3439999 | MS.gene78591:CDS |
| CGAAGAATAGGAGCGTCCCA+GGG | 0.664768 | 7.4:+3439109 | MS.gene78591:CDS |
| GTCCTTCTAGACCTAGAACA+GGG | 0.666093 | 7.4:+3439166 | MS.gene78591:CDS |
| TACAGTATGGATGAGAAGGG+TGG | 0.669176 | 7.4:+3440173 | MS.gene78591:CDS |
| ATGATGTTGAGATGAAAAGG+GGG | 0.672376 | 7.4:+3438187 | MS.gene78591:CDS |
| AGATTCTCATGGTATAGACA+AGG | 0.676876 | 7.4:+3439035 | MS.gene78591:CDS |
| ATTATGATTCTGATGAACAG+CGG | 0.679445 | 7.4:+3439445 | MS.gene78591:CDS |
| AGTCTTATAGAAATGCTAGA+GGG | 0.683962 | 7.4:+3439751 | MS.gene78591:CDS |
| TTACATCTCCTTCATCCAGG+TGG | 0.684945 | 7.4:-3437444 | None:intergenic |
| GCATTTCTATAAGACTGCCG+GGG | 0.703378 | 7.4:-3439744 | None:intergenic |
| GGGTCTCAGGGAAGTAACCG+TGG | 0.707185 | 7.4:+3440020 | MS.gene78591:CDS |
| GGAATTGGTGAAGAAAGAGG+TGG | 0.708417 | 7.4:+3436869 | MS.gene78591:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTTTAATAAATACAGTA+TGG | + | chr7.4:3440160-3440179 | MS.gene78591:CDS | 20.0% |
| !! | ATAATGAGAAAAATATGCTT+CGG | - | chr7.4:3437813-3437832 | None:intergenic | 20.0% |
| !! | TACAAAAATTCATTGATATC+AGG | + | chr7.4:3437849-3437868 | MS.gene78591:intron | 20.0% |
| !! | TAGCAAAATCTAACAATATT+TGG | - | chr7.4:3438756-3438775 | None:intergenic | 20.0% |
| !!! | AATTTGGTTATGAGTATTTT+TGG | - | chr7.4:3436745-3436764 | None:intergenic | 20.0% |
| !!! | ATCAGAATTATTTTGATCAT+AGG | + | chr7.4:3436943-3436962 | MS.gene78591:CDS | 20.0% |
| !!! | TAACTAAGTTGAATTCATTT+TGG | + | chr7.4:3437128-3437147 | MS.gene78591:intron | 20.0% |
| !!! | TATTGTTCTGTTTTACATAT+GGG | + | chr7.4:3437248-3437267 | MS.gene78591:intron | 20.0% |
| !!! | TGAGTTGTTTATTTTTTATC+TGG | + | chr7.4:3438790-3438809 | MS.gene78591:intron | 20.0% |
| !!! | TTATTGTTCTGTTTTACATA+TGG | + | chr7.4:3437247-3437266 | MS.gene78591:intron | 20.0% |
| ! | AATAAAAGTAAAACAGCTTC+TGG | + | chr7.4:3439354-3439373 | MS.gene78591:CDS | 25.0% |
| ! | ACAATTCACAAGTAATGAAT+AGG | + | chr7.4:3437573-3437592 | MS.gene78591:intron | 25.0% |
| ! | AGAATCTGCATATTCAAAAT+TGG | - | chr7.4:3439022-3439041 | None:intergenic | 25.0% |
| ! | AGAGTAACATAATGATATTG+TGG | + | chr7.4:3437221-3437240 | MS.gene78591:intron | 25.0% |
| ! | GTATATCATTAACTACCAAA+AGG | - | chr7.4:3438451-3438470 | None:intergenic | 25.0% |
| ! | GTGTAGCAAACATAATAAAT+TGG | - | chr7.4:3438345-3438364 | None:intergenic | 25.0% |
| ! | TAATGAGAAAAATATGCTTC+GGG | - | chr7.4:3437812-3437831 | None:intergenic | 25.0% |
| ! | TATACTATTAGACGTCAAAT+TGG | + | chr7.4:3438466-3438485 | MS.gene78591:intron | 25.0% |
| ! | TCATTACTTGTGAATTGTAA+TGG | - | chr7.4:3437571-3437590 | None:intergenic | 25.0% |
| ! | TTAAGTCCATTTAATGTTCT+GGG | + | chr7.4:3438675-3438694 | MS.gene78591:intron | 25.0% |
| ! | TTTAAGTCCATTTAATGTTC+TGG | + | chr7.4:3438674-3438693 | MS.gene78591:intron | 25.0% |
| !! | ATGAATGATTGATTGATTTC+AGG | + | chr7.4:3437323-3437342 | MS.gene78591:intron | 25.0% |
| !! | ATTGTTCTGTTTTACATATG+GGG | + | chr7.4:3437249-3437268 | MS.gene78591:intron | 25.0% |
| !! | TAAATGGACTTAAACTTACT+CGG | - | chr7.4:3438668-3438687 | None:intergenic | 25.0% |
| !!! | AAGAGATTTGATGATTTTGA+TGG | + | chr7.4:3440047-3440066 | MS.gene78591:CDS | 25.0% |
| !!! | AAGTTGATTCATTGTTGTTT+TGG | + | chr7.4:3437518-3437537 | MS.gene78591:intron | 25.0% |
| !!! | AGAATTATTTTGATCATAGG+AGG | + | chr7.4:3436946-3436965 | MS.gene78591:CDS | 25.0% |
| !!! | ATTTTGGTTGTTGAATTTGT+TGG | + | chr7.4:3437144-3437163 | MS.gene78591:intron | 25.0% |
| !!! | ATTTTTTCTGTTTCTCCTTT+TGG | + | chr7.4:3438433-3438452 | MS.gene78591:intron | 25.0% |
| !!! | GACATGATTTGTTTTTATCT+GGG | - | chr7.4:3438731-3438750 | None:intergenic | 25.0% |
| !!! | TATCTTGAGTTTTATTTTCC+AGG | - | chr7.4:3438891-3438910 | None:intergenic | 25.0% |
| !!! | TGACATGATTTGTTTTTATC+TGG | - | chr7.4:3438732-3438751 | None:intergenic | 25.0% |
| !!! | TTGTTTATTTTTTATCTGGC+AGG | + | chr7.4:3438794-3438813 | MS.gene78591:intron | 25.0% |
| !!! | TTTTCTCTGGAAAACTTTTA+AGG | + | chr7.4:3437413-3437432 | MS.gene78591:CDS | 25.0% |
| AAATACAGTATGGATGAGAA+GGG | + | chr7.4:3440170-3440189 | MS.gene78591:CDS | 30.0% | |
| AAATCTTATGGGAATGATAG+AGG | + | chr7.4:3440080-3440099 | MS.gene78591:CDS | 30.0% | |
| AAGTTGAGAAATGGAAGAAT+GGG | - | chr7.4:3436590-3436609 | None:intergenic | 30.0% | |
| AATAAGAAAGATCGCAAAAG+AGG | - | chr7.4:3437773-3437792 | None:intergenic | 30.0% | |
| AATCTTATGGGAATGATAGA+GGG | + | chr7.4:3440081-3440100 | MS.gene78591:CDS | 30.0% | |
| AGAACAATCAAATCAATCTC+AGG | - | chr7.4:3437694-3437713 | None:intergenic | 30.0% | |
| AGAACCAAAGCTTAATTTCT+TGG | - | chr7.4:3439541-3439560 | None:intergenic | 30.0% | |
| AGAAGGAACTTTACTAAAGA+TGG | + | chr7.4:3439666-3439685 | MS.gene78591:CDS | 30.0% | |
| ATAAAATGGTGCAGGATTTA+GGG | + | chr7.4:3436979-3436998 | MS.gene78591:CDS | 30.0% | |
| ATAAGAAAGATCGCAAAAGA+GGG | - | chr7.4:3437772-3437791 | None:intergenic | 30.0% | |
| ATAATCAAGTTCATCTTCCT+TGG | - | chr7.4:3439430-3439449 | None:intergenic | 30.0% | |
| ATTAACATATTCGTCATCGT+GGG | - | chr7.4:3439136-3439155 | None:intergenic | 30.0% | |
| ATTATGATTCTGATGAACAG+CGG | + | chr7.4:3439445-3439464 | MS.gene78591:CDS | 30.0% | |
| ATTCATCCAGGCAAAATAAA+GGG | + | chr7.4:3439625-3439644 | MS.gene78591:CDS | 30.0% | |
| ATTTAGCATCTTCAGTTAAG+AGG | - | chr7.4:3438541-3438560 | None:intergenic | 30.0% | |
| GGACCTAACTTTAATAAGAT+GGG | + | chr7.4:3438925-3438944 | MS.gene78591:CDS | 30.0% | |
| TAAATACAGTATGGATGAGA+AGG | + | chr7.4:3440169-3440188 | MS.gene78591:CDS | 30.0% | |
| TAAGTCCATTTAATGTTCTG+GGG | + | chr7.4:3438676-3438695 | MS.gene78591:intron | 30.0% | |
| TATTCATCCAGGCAAAATAA+AGG | + | chr7.4:3439624-3439643 | MS.gene78591:CDS | 30.0% | |
| TGAAGATGATGACTTAAATG+AGG | + | chr7.4:3439599-3439618 | MS.gene78591:CDS | 30.0% | |
| TGGACCTAACTTTAATAAGA+TGG | + | chr7.4:3438924-3438943 | MS.gene78591:CDS | 30.0% | |
| TGTCATTACCATAAGATTTC+CGG | - | chr7.4:3439830-3439849 | None:intergenic | 30.0% | |
| TTATCTGCTTACAAACAAAG+AGG | + | chr7.4:3437912-3437931 | MS.gene78591:CDS | 30.0% | |
| TTTACTAAAGATGGAAAGTC+TGG | + | chr7.4:3439675-3439694 | MS.gene78591:CDS | 30.0% | |
| TTTCTTCAGATAACAATGCT+CGG | + | chr7.4:3439061-3439080 | MS.gene78591:CDS | 30.0% | |
| TTTGAATATGCAGATTCTCA+TGG | + | chr7.4:3439024-3439043 | MS.gene78591:CDS | 30.0% | |
| ! | AAATCTTATGGTAATGACAG+AGG | + | chr7.4:3439831-3439850 | MS.gene78591:CDS | 30.0% |
| ! | AAGATGATTTTGCGAAGAAT+AGG | + | chr7.4:3439097-3439116 | MS.gene78591:CDS | 30.0% |
| ! | AATCTTATGGTAATGACAGA+GGG | + | chr7.4:3439832-3439851 | MS.gene78591:CDS | 30.0% |
| ! | AGTCTTATAGAAATGCTAGA+GGG | + | chr7.4:3439751-3439770 | MS.gene78591:CDS | 30.0% |
| ! | CAAGATAAAAAGTACAGTTC+TGG | + | chr7.4:3438904-3438923 | MS.gene78591:CDS | 30.0% |
| ! | CTTTTGCGATCTTTCTTATT+TGG | + | chr7.4:3437773-3437792 | MS.gene78591:intron | 30.0% |
| ! | GAAGATGCTAAATACTTTTC+AGG | + | chr7.4:3438548-3438567 | MS.gene78591:intron | 30.0% |
| ! | TTATTTTCCAGGAATTCATC+AGG | - | chr7.4:3438880-3438899 | None:intergenic | 30.0% |
| ! | TTGAAGAGTTTCGTGTTTTT+GGG | - | chr7.4:3436700-3436719 | None:intergenic | 30.0% |
| ! | TTGTTCTGTTTTACATATGG+GGG | + | chr7.4:3437250-3437269 | MS.gene78591:intron | 30.0% |
| ! | TTTGATGACAATGAATCAGA+TGG | + | chr7.4:3438985-3439004 | MS.gene78591:CDS | 30.0% |
| !! | AAGAGGTTTGATGATTTTGA+TGG | + | chr7.4:3439798-3439817 | MS.gene78591:CDS | 30.0% |
| !! | AGGAATTTTGTTTGAGATGA+TGG | + | chr7.4:3437593-3437612 | MS.gene78591:intron | 30.0% |
| !! | CAAGTGTCTATATTTGTTGT+CGG | + | chr7.4:3437658-3437677 | MS.gene78591:intron | 30.0% |
| !! | TGAAGGGTTTGATTTTACTA+AGG | + | chr7.4:3437028-3437047 | MS.gene78591:CDS | 30.0% |
| !! | TGAGATTGATTTGATTGTTC+TGG | + | chr7.4:3437693-3437712 | MS.gene78591:intron | 30.0% |
| !!! | ATGATTTGTTTTTATCTGGG+AGG | - | chr7.4:3438728-3438747 | None:intergenic | 30.0% |
| !!! | ATTCAAGTTTTGGTTGGTTT+TGG | + | chr7.4:3437364-3437383 | MS.gene78591:CDS | 30.0% |
| !!! | TGATTTGTTTTTATCTGGGA+GGG | - | chr7.4:3438727-3438746 | None:intergenic | 30.0% |
| !!! | TTATTTTGATCATAGGAGGA+AGG | + | chr7.4:3436950-3436969 | MS.gene78591:CDS | 30.0% |
| AAAGTCAAAATTCCAGGCAT+TGG | - | chr7.4:3438968-3438987 | None:intergenic | 35.0% | |
| AAATCATCAAACCCTGTTCT+AGG | - | chr7.4:3439180-3439199 | None:intergenic | 35.0% | |
| ACTTTAATAAGATGGGCAGT+CGG | + | chr7.4:3438932-3438951 | MS.gene78591:CDS | 35.0% | |
| AGATTCTCATGGTATAGACA+AGG | + | chr7.4:3439035-3439054 | MS.gene78591:CDS | 35.0% | |
| AGGACTGATGATCCATTAAT+AGG | - | chr7.4:3437991-3438010 | None:intergenic | 35.0% | |
| AGTAAATCACAGAGATTCCA+AGG | - | chr7.4:3438236-3438255 | None:intergenic | 35.0% | |
| AGTTGAGAAATGGAAGAATG+GGG | - | chr7.4:3436589-3436608 | None:intergenic | 35.0% | |
| ATGATGTTGAGATGAAAAGG+GGG | + | chr7.4:3438187-3438206 | MS.gene78591:CDS | 35.0% | |
| ATGTATTCTTGCGAACTGAA+CGG | - | chr7.4:3439395-3439414 | None:intergenic | 35.0% | |
| CATACCTCAACAAATCAAAC+CGG | - | chr7.4:3437097-3437116 | None:intergenic | 35.0% | |
| CATCAAACCTCTTCTTATCA+CGG | - | chr7.4:3439791-3439810 | None:intergenic | 35.0% | |
| CATTAACATATTCGTCATCG+TGG | - | chr7.4:3439137-3439156 | None:intergenic | 35.0% | |
| CCAAAGCTTAATTTCTTGGT+TGG | - | chr7.4:3439537-3439556 | None:intergenic | 35.0% | |
| CCAACCAAGAAATTAAGCTT+TGG | + | chr7.4:3439534-3439553 | MS.gene78591:CDS | 35.0% | |
| CTGAGATTGTACATGATGAA+GGG | + | chr7.4:3437012-3437031 | MS.gene78591:CDS | 35.0% | |
| CTGCCCATCTTATTAAAGTT+AGG | - | chr7.4:3438931-3438950 | None:intergenic | 35.0% | |
| CTTGAATTACAGAAGGAATG+TGG | + | chr7.4:3438825-3438844 | MS.gene78591:CDS | 35.0% | |
| CTTGGGTTTGATCCTATTAA+TGG | + | chr7.4:3437976-3437995 | MS.gene78591:CDS | 35.0% | |
| GAAGTTGAGAAATGGAAGAA+TGG | - | chr7.4:3436591-3436610 | None:intergenic | 35.0% | |
| GAGGAAGGATGAAGATAAAA+TGG | + | chr7.4:3436965-3436984 | MS.gene78591:CDS | 35.0% | |
| GATAAAATGGTGCAGGATTT+AGG | + | chr7.4:3436978-3436997 | MS.gene78591:CDS | 35.0% | |
| GATGACGAATATGTTAATGC+CGG | + | chr7.4:3439138-3439157 | MS.gene78591:CDS | 35.0% | |
| GATGATGTTGAGATGAAAAG+GGG | + | chr7.4:3438186-3438205 | MS.gene78591:CDS | 35.0% | |
| GATTCAATTGATGGAGAGAT+TGG | + | chr7.4:3436917-3436936 | MS.gene78591:CDS | 35.0% | |
| GCAACTTCTTGAATTACAGA+AGG | + | chr7.4:3438818-3438837 | MS.gene78591:CDS | 35.0% | |
| GGATGATGTTGAGATGAAAA+GGG | + | chr7.4:3438185-3438204 | MS.gene78591:CDS | 35.0% | |
| GGCTACAAATCAAACATGTT+CGG | + | chr7.4:3439702-3439721 | MS.gene78591:CDS | 35.0% | |
| GTCATCAAAGTCAAAATTCC+AGG | - | chr7.4:3438974-3438993 | None:intergenic | 35.0% | |
| GTCATTACCATAAGATTTCC+GGG | - | chr7.4:3439829-3439848 | None:intergenic | 35.0% | |
| TAAAATTAACAGCCAACCTG+TGG | + | chr7.4:3436848-3436867 | MS.gene78591:CDS | 35.0% | |
| TAAATGAGGCATATTCATCC+AGG | + | chr7.4:3439613-3439632 | MS.gene78591:CDS | 35.0% | |
| TAAGAAAGATCGCAAAAGAG+GGG | - | chr7.4:3437771-3437790 | None:intergenic | 35.0% | |
| TAGCATTTCTATAAGACTGC+CGG | - | chr7.4:3439749-3439768 | None:intergenic | 35.0% | |
| TATGAGCTAGAAACTGAAAC+AGG | + | chr7.4:3439225-3439244 | MS.gene78591:CDS | 35.0% | |
| TCAACCAAAAAAAGTTCACC+TGG | - | chr7.4:3438376-3438395 | None:intergenic | 35.0% | |
| TCCATCAATTGAATCCATTC+CGG | - | chr7.4:3436912-3436931 | None:intergenic | 35.0% | |
| TGTAACCCCAGAACATTAAA+TGG | - | chr7.4:3438684-3438703 | None:intergenic | 35.0% | |
| TTCAGAAACAGAAGACTCTT+TGG | + | chr7.4:3439287-3439306 | MS.gene78591:CDS | 35.0% | |
| ! | AAATGGAAGAATGGGGTTTT+AGG | - | chr7.4:3436582-3436601 | None:intergenic | 35.0% |
| ! | AATGGAAGAATGGGGTTTTA+GGG | - | chr7.4:3436581-3436600 | None:intergenic | 35.0% |
| ! | ATGCTGCTTGTCTTAATTTC+GGG | + | chr7.4:3437066-3437085 | MS.gene78591:CDS | 35.0% |
| ! | ATTATGTTTGCTACACCATG+TGG | + | chr7.4:3438349-3438368 | MS.gene78591:intron | 35.0% |
| ! | CAGTCTTATAGAAATGCTAG+AGG | + | chr7.4:3439750-3439769 | MS.gene78591:CDS | 35.0% |
| ! | CATGCTGCTTGTCTTAATTT+CGG | + | chr7.4:3437065-3437084 | MS.gene78591:CDS | 35.0% |
| ! | GTTGAAGAGTTTCGTGTTTT+TGG | - | chr7.4:3436701-3436720 | None:intergenic | 35.0% |
| ! | TAGGCAGAAATTTGATGACA+GGG | + | chr7.4:3440124-3440143 | MS.gene78591:CDS | 35.0% |
| ! | TCTGAGATTGTACATGATGA+AGG | + | chr7.4:3437011-3437030 | MS.gene78591:CDS | 35.0% |
| !! | AACAGGGTTTGATGATTTTG+AGG | + | chr7.4:3439182-3439201 | MS.gene78591:CDS | 35.0% |
| !! | AAGCGGTTTGATGATTTTGA+TGG | + | chr7.4:3439879-3439898 | MS.gene78591:CDS | 35.0% |
| !! | ATGATTTTGATGAATCACCC+CGG | + | chr7.4:3439727-3439746 | MS.gene78591:CDS | 35.0% |
| !! | ATGATTTTGATGGATCATCC+CGG | + | chr7.4:3439808-3439827 | MS.gene78591:CDS | 35.0% |
| !! | ATGATTTTGATGGATCGTCT+CGG | + | chr7.4:3440057-3440076 | MS.gene78591:CDS | 35.0% |
| !! | ATTTTGATGGATCATCATCC+CGG | + | chr7.4:3439892-3439911 | MS.gene78591:CDS | 35.0% |
| !! | CAGGATATTCAAGTTTTGGT+TGG | + | chr7.4:3437358-3437377 | MS.gene78591:CDS | 35.0% |
| !! | CGATCTTTCTTATTTGGTGT+TGG | + | chr7.4:3437779-3437798 | MS.gene78591:intron | 35.0% |
| !! | GCAGTGATTTTAGAAACAGT+AGG | + | chr7.4:3440195-3440214 | MS.gene78591:CDS | 35.0% |
| !! | GTTTGATGATTTTGAGGAAG+AGG | + | chr7.4:3439188-3439207 | MS.gene78591:CDS | 35.0% |
| !! | GTTTGATTTGTTGAGGTATG+TGG | + | chr7.4:3437097-3437116 | MS.gene78591:intron | 35.0% |
| !! | TGATTCTGAAACAGGTTGTT+CGG | - | chr7.4:3436769-3436788 | None:intergenic | 35.0% |
| !!! | GATTTGTTTTTATCTGGGAG+GGG | - | chr7.4:3438726-3438745 | None:intergenic | 35.0% |
| !!! | TAATTGTTTTGAGCACCGAA+TGG | - | chr7.4:3437484-3437503 | None:intergenic | 35.0% |
| AAACAGAAGACTCTTTGGAC+TGG | + | chr7.4:3439292-3439311 | MS.gene78591:CDS | 40.0% | |
| AAACAGGTTGTTCGGGAATT+TGG | - | chr7.4:3436761-3436780 | None:intergenic | 40.0% | |
| AAAGGGAACAGACATGATTC+TGG | + | chr7.4:3439642-3439661 | MS.gene78591:CDS | 40.0% | |
| AACAGAAGACTCTTTGGACT+GGG | + | chr7.4:3439293-3439312 | MS.gene78591:CDS | 40.0% | |
| AAGGGAACAGACATGATTCT+GGG | + | chr7.4:3439643-3439662 | MS.gene78591:CDS | 40.0% | |
| ACAGACTTCTGCTTCAAAAG+TGG | - | chr7.4:3438021-3438040 | None:intergenic | 40.0% | |
| ACTAAAGATGGAAAGTCTGG+TGG | + | chr7.4:3439678-3439697 | MS.gene78591:CDS | 40.0% | |
| AGCATTTCTATAAGACTGCC+GGG | - | chr7.4:3439748-3439767 | None:intergenic | 40.0% | |
| AGCTTCCATTCTTGAACTAC+TGG | - | chr7.4:3439253-3439272 | None:intergenic | 40.0% | |
| AGGAACCAGTAGTTCAAGAA+TGG | + | chr7.4:3439245-3439264 | MS.gene78591:CDS | 40.0% | |
| CAGAGAGAGAAGAAGGTTTA+GGG | - | chr7.4:3436626-3436645 | None:intergenic | 40.0% | |
| CATCAAATTTCTGCCTACTC+CGG | - | chr7.4:3440121-3440140 | None:intergenic | 40.0% | |
| CTAGAACTTGACATGCACTT+TGG | - | chr7.4:3438291-3438310 | None:intergenic | 40.0% | |
| CTATGTCCAAAGTATGTCCT+TGG | + | chr7.4:3438216-3438235 | MS.gene78591:intron | 40.0% | |
| GAAGTAACCGTGATAAGAAG+AGG | + | chr7.4:3439781-3439800 | MS.gene78591:CDS | 40.0% | |
| GAATTAACGATGCCTATCAG+TGG | - | chr7.4:3438403-3438422 | None:intergenic | 40.0% | |
| GAGACAAGATTCAAATCCTC+CGG | - | chr7.4:3437622-3437641 | None:intergenic | 40.0% | |
| GAGATTCCAAGGACATACTT+TGG | - | chr7.4:3438225-3438244 | None:intergenic | 40.0% | |
| GATCGTCTCGGAAATCTTAT+GGG | + | chr7.4:3440069-3440088 | MS.gene78591:CDS | 40.0% | |
| GGATGAAGATAAAATGGTGC+AGG | + | chr7.4:3436971-3436990 | MS.gene78591:CDS | 40.0% | |
| GGGATGATGTTGAGATGAAA+AGG | + | chr7.4:3438184-3438203 | MS.gene78591:CDS | 40.0% | |
| TACATCTTTCTCTCGATCCA+AGG | + | chr7.4:3439410-3439429 | MS.gene78591:CDS | 40.0% | |
| TCATCATCCCGGAAATCTTA+TGG | + | chr7.4:3439903-3439922 | MS.gene78591:CDS | 40.0% | |
| TCTTTCTTCACCAATTCCAC+AGG | - | chr7.4:3436867-3436886 | None:intergenic | 40.0% | |
| TGATGTTGAGATGAAAAGGG+GGG | + | chr7.4:3438188-3438207 | MS.gene78591:CDS | 40.0% | |
| TGCTTGTCTTAATTTCGGGA+AGG | + | chr7.4:3437070-3437089 | MS.gene78591:CDS | 40.0% | |
| TGTATTCTTGCGAACTGAAC+GGG | - | chr7.4:3439394-3439413 | None:intergenic | 40.0% | |
| TGTGGAATTGGTGAAGAAAG+AGG | + | chr7.4:3436866-3436885 | MS.gene78591:CDS | 40.0% | |
| TTGGTTGACAAACCACTGAT+AGG | + | chr7.4:3438388-3438407 | MS.gene78591:intron | 40.0% | |
| TTTCCAGGAATTCATCAGGT+GGG | - | chr7.4:3438876-3438895 | None:intergenic | 40.0% | |
| ! | AAATTTGATGACAGGGAGCA+CGG | + | chr7.4:3440131-3440150 | MS.gene78591:CDS | 40.0% |
| ! | ACAATTGTTTCTCAAGCTGC+AGG | - | chr7.4:3437884-3437903 | None:intergenic | 40.0% |
| ! | AGAGAAGAAGGTTTAGGGTT+TGG | - | chr7.4:3436621-3436640 | None:intergenic | 40.0% |
| ! | GACGAAGATGTTGTTGTTGT+TGG | - | chr7.4:3436807-3436826 | None:intergenic | 40.0% |
| ! | GAGAAGAAGGTTTAGGGTTT+GGG | - | chr7.4:3436620-3436639 | None:intergenic | 40.0% |
| ! | GATGTTGTTGTTGTTGGTGA+TGG | - | chr7.4:3436801-3436820 | None:intergenic | 40.0% |
| ! | GTAGGCAGAAATTTGATGAC+AGG | + | chr7.4:3440123-3440142 | MS.gene78591:CDS | 40.0% |
| ! | TTTTCCAGGAATTCATCAGG+TGG | - | chr7.4:3438877-3438896 | None:intergenic | 40.0% |
| !! | AAGGTTTAGGGTTTGGGTTT+TGG | - | chr7.4:3436614-3436633 | None:intergenic | 40.0% |
| !! | AGGTTTAGGGTTTGGGTTTT+GGG | - | chr7.4:3436613-3436632 | None:intergenic | 40.0% |
| !! | ATATTTGTTGTCGGTGGCAA+AGG | + | chr7.4:3437667-3437686 | MS.gene78591:intron | 40.0% |
| !! | ATTTTGATGGATCGTCATCC+CGG | + | chr7.4:3439976-3439995 | MS.gene78591:CDS | 40.0% |
| !! | GAGGCAGGATATTCAAGTTT+TGG | + | chr7.4:3437354-3437373 | MS.gene78591:CDS | 40.0% |
| !! | GATTCTGAAACAGGTTGTTC+GGG | - | chr7.4:3436768-3436787 | None:intergenic | 40.0% |
| !! | GTGTCTATATTTGTTGTCGG+TGG | + | chr7.4:3437661-3437680 | MS.gene78591:intron | 40.0% |
| !! | TTGTTTGAGATGATGGAAGC+CGG | + | chr7.4:3437600-3437619 | MS.gene78591:intron | 40.0% |
| !!! | ATGGGGTTTTAGGGTTTAAG+AGG | - | chr7.4:3436572-3436591 | None:intergenic | 40.0% |
| !!! | GGTTTTGGGAAGTTGAGAAA+TGG | - | chr7.4:3436599-3436618 | None:intergenic | 40.0% |
| !!! | TCTGTTCCCTTTATTTTGCC+TGG | - | chr7.4:3439634-3439653 | None:intergenic | 40.0% |
| !!! | TGGACCAGGTGAACTTTTTT+TGG | + | chr7.4:3438369-3438388 | MS.gene78591:intron | 40.0% |
| AAAAGTTCACCTGGTCCACA+TGG | - | chr7.4:3438367-3438386 | None:intergenic | 45.0% | |
| AAAGATGGAAAGTCTGGTGG+TGG | + | chr7.4:3439681-3439700 | MS.gene78591:CDS | 45.0% | |
| AACCACCTTTCTGTCCACAT+TGG | - | chr7.4:3437395-3437414 | None:intergenic | 45.0% | |
| AATTGAATCCATTCCGGCCA+CGG | - | chr7.4:3436906-3436925 | None:intergenic | 45.0% | |
| ACAGTTGCTTCCAGGAGAAT+GGG | + | chr7.4:3438636-3438655 | MS.gene78591:CDS | 45.0% | |
| ACCACCTTTCTGTCCACATT+GGG | - | chr7.4:3437394-3437413 | None:intergenic | 45.0% | |
| AGAAATGCTAGAGGGTCTCA+GGG | + | chr7.4:3439759-3439778 | MS.gene78591:CDS | 45.0% | |
| AGTGTAACACGCATGCCATT+CGG | + | chr7.4:3437466-3437485 | MS.gene78591:intron | 45.0% | |
| ATGCGAATGCTACTGACACT+TGG | + | chr7.4:3437958-3437977 | MS.gene78591:CDS | 45.0% | |
| CACTTACATCTCCTTCATCC+AGG | - | chr7.4:3437450-3437469 | None:intergenic | 45.0% | |
| CATCAAATCTCTTCCGACCA+CGG | - | chr7.4:3440040-3440059 | None:intergenic | 45.0% | |
| CTCTTCAACGAATTCGTGCT+TGG | + | chr7.4:3436712-3436731 | MS.gene78591:CDS | 45.0% | |
| GAACTTGACATGCACTTTGG+TGG | - | chr7.4:3438288-3438307 | None:intergenic | 45.0% | |
| GAATATGTTAATGCCGGTCC+CGG | + | chr7.4:3439144-3439163 | MS.gene78591:CDS | 45.0% | |
| GACAGATGCGAGTGAGATAA+TGG | - | chr7.4:3437730-3437749 | None:intergenic | 45.0% | |
| GATCAAAAAGCCTCCACCAA+AGG | + | chr7.4:3438122-3438141 | MS.gene78591:CDS | 45.0% | |
| GCAGAAGTCTGTTAAAGCAG+TGG | + | chr7.4:3438029-3438048 | MS.gene78591:CDS | 45.0% | |
| GCAGAGAGAGAAGAAGGTTT+AGG | - | chr7.4:3436627-3436646 | None:intergenic | 45.0% | |
| GCATTTCTATAAGACTGCCG+GGG | - | chr7.4:3439747-3439766 | None:intergenic | 45.0% | |
| GCTTACAAACAAAGAGGACG+AGG | + | chr7.4:3437918-3437937 | MS.gene78591:CDS | 45.0% | |
| GGAATTGGTGAAGAAAGAGG+TGG | + | chr7.4:3436869-3436888 | MS.gene78591:CDS | 45.0% | |
| GGAGGGAGATTTGGATCAAT+AGG | - | chr7.4:3438096-3438115 | None:intergenic | 45.0% | |
| GGATCATCCCGGAAATCTTA+TGG | + | chr7.4:3439819-3439838 | MS.gene78591:CDS | 45.0% | |
| GGATCGTCTCGGAAATCTTA+TGG | + | chr7.4:3440068-3440087 | MS.gene78591:CDS | 45.0% | |
| GTCCTTCTAGACCTAGAACA+GGG | + | chr7.4:3439166-3439185 | MS.gene78591:CDS | 45.0% | |
| GTCTTAATTTCGGGAAGGAC+CGG | + | chr7.4:3437075-3437094 | MS.gene78591:CDS | 45.0% | |
| TAACAGCCAACCTGTGGAAT+TGG | + | chr7.4:3436854-3436873 | MS.gene78591:CDS | 45.0% | |
| TACAGTATGGATGAGAAGGG+TGG | + | chr7.4:3440173-3440192 | MS.gene78591:CDS | 45.0% | |
| TAGAAATGCTAGAGGGTCTC+AGG | + | chr7.4:3439758-3439777 | MS.gene78591:CDS | 45.0% | |
| TCGTCATCCCGGAAATCTTA+TGG | + | chr7.4:3439987-3440006 | MS.gene78591:CDS | 45.0% | |
| TCTTCACCAATTCCACAGGT+TGG | - | chr7.4:3436863-3436882 | None:intergenic | 45.0% | |
| TGCGAATGCTACTGACACTT+GGG | + | chr7.4:3437959-3437978 | MS.gene78591:CDS | 45.0% | |
| TTACATCTCCTTCATCCAGG+TGG | - | chr7.4:3437447-3437466 | None:intergenic | 45.0% | |
| TTTAAGGAAGCTTGTCCACC+TGG | + | chr7.4:3437429-3437448 | MS.gene78591:CDS | 45.0% | |
| ! | AACCCTGTTCTAGGTCTAGA+AGG | - | chr7.4:3439171-3439190 | None:intergenic | 45.0% |
| ! | AAGCTGCTTTGAGTAGTGTG+AGG | + | chr7.4:3438499-3438518 | MS.gene78591:intron | 45.0% |
| ! | ACAGACATGATTCTGGGAGA+AGG | + | chr7.4:3439649-3439668 | MS.gene78591:CDS | 45.0% |
| ! | GACAGAAAGGTGGTTTTCTC+TGG | + | chr7.4:3437400-3437419 | MS.gene78591:CDS | 45.0% |
| ! | GCCGGAATGGATTCAATTGA+TGG | + | chr7.4:3436908-3436927 | MS.gene78591:CDS | 45.0% |
| ! | GCTTTTTGATCACTGGAGGA+GGG | - | chr7.4:3438113-3438132 | None:intergenic | 45.0% |
| ! | TGTTCTAGGTCTAGAAGGAC+CGG | - | chr7.4:3439166-3439185 | None:intergenic | 45.0% |
| ! | TTGATTTCAGGTCGTTGTCG+AGG | + | chr7.4:3437335-3437354 | MS.gene78591:intron | 45.0% |
| !! | AGGACCGGTTTGATTTGTTG+AGG | + | chr7.4:3437090-3437109 | MS.gene78591:CDS | 45.0% |
| !! | GCTTCAAAAGTGGCTTGTTG+AGG | - | chr7.4:3438011-3438030 | None:intergenic | 45.0% |
| !! | GTTGTTGTTGTTGGTGATGG+TGG | - | chr7.4:3436798-3436817 | None:intergenic | 45.0% |
| !! | TGTTTTTATCTGGGAGGGGA+GGG | - | chr7.4:3438722-3438741 | None:intergenic | 45.0% |
| !!! | GGGTTTTAGGGTTTAAGAGG+CGG | - | chr7.4:3436569-3436588 | None:intergenic | 45.0% |
| !!! | TTGTTTTTATCTGGGAGGGG+AGG | - | chr7.4:3438723-3438742 | None:intergenic | 45.0% |
| AAGCTTGTCCACCTGGATGA+AGG | + | chr7.4:3437436-3437455 | MS.gene78591:CDS | 50.0% | |
| AGACGAGCAGAGAGAGAAGA+AGG | - | chr7.4:3436633-3436652 | None:intergenic | 50.0% | |
| AGATAACAATGCTCGGCGTG+TGG | + | chr7.4:3439068-3439087 | MS.gene78591:CDS | 50.0% | |
| AGGTGGAATTTGTGCATCCG+TGG | + | chr7.4:3436886-3436905 | MS.gene78591:CDS | 50.0% | |
| ATAACAATGCTCGGCGTGTG+GGG | + | chr7.4:3439070-3439089 | MS.gene78591:CDS | 50.0% | |
| ATCACTGGAGGAGGGAGATT+TGG | - | chr7.4:3438105-3438124 | None:intergenic | 50.0% | |
| ATGCCCCAATGTGGACAGAA+AGG | + | chr7.4:3437387-3437406 | MS.gene78591:CDS | 50.0% | |
| CAAACAAAGAGGACGAGGCA+CGG | + | chr7.4:3437923-3437942 | MS.gene78591:CDS | 50.0% | |
| CATCAAACCGCTTCCGATCA+CGG | - | chr7.4:3439872-3439891 | None:intergenic | 50.0% | |
| CCAACACGTCTCTTTGGACT+AGG | - | chr7.4:3438162-3438181 | None:intergenic | 50.0% | |
| CCACCTTTCTGTCCACATTG+GGG | - | chr7.4:3437393-3437412 | None:intergenic | 50.0% | |
| CCTAGTCCAAAGAGACGTGT+TGG | + | chr7.4:3438159-3438178 | MS.gene78591:CDS | 50.0% | |
| CCTGGAAGCAACTGTCTCTT+GGG | - | chr7.4:3438631-3438650 | None:intergenic | 50.0% | |
| CTCAGGGAAGTAACCGTGAT+CGG | + | chr7.4:3439775-3439794 | MS.gene78591:CDS | 50.0% | |
| GAAGTAACCGTGATCGGAAG+CGG | + | chr7.4:3439862-3439881 | MS.gene78591:CDS | 50.0% | |
| GACAGTTGCTTCCAGGAGAA+TGG | + | chr7.4:3438635-3438654 | MS.gene78591:CDS | 50.0% | |
| GATAACAATGCTCGGCGTGT+GGG | + | chr7.4:3439069-3439088 | MS.gene78591:CDS | 50.0% | |
| GGTAATGACAGAGGGTCTCA+GGG | + | chr7.4:3439840-3439859 | MS.gene78591:CDS | 50.0% | |
| GGTCCTTCTAGACCTAGAAC+AGG | + | chr7.4:3439165-3439184 | MS.gene78591:CDS | 50.0% | |
| GTCCAAAGAGACGTGTTGGA+CGG | + | chr7.4:3438163-3438182 | MS.gene78591:CDS | 50.0% | |
| TCCAAAGAGACGTGTTGGAC+GGG | + | chr7.4:3438164-3438183 | MS.gene78591:CDS | 50.0% | |
| TCCTGGAAGCAACTGTCTCT+TGG | - | chr7.4:3438632-3438651 | None:intergenic | 50.0% | |
| TCGGTACATTCCCATTCTCC+TGG | - | chr7.4:3438649-3438668 | None:intergenic | 50.0% | |
| TCTGCCTTTCCTTCTCTGGT+CGG | - | chr7.4:3439511-3439530 | None:intergenic | 50.0% | |
| TTGAGATGAAAAGGGGGGAC+TGG | + | chr7.4:3438193-3438212 | MS.gene78591:CDS | 50.0% | |
| TTTGCTACACCATGTGGACC+AGG | + | chr7.4:3438355-3438374 | MS.gene78591:intron | 50.0% | |
| ! | ACACGTCTCTTTGGACTAGG+AGG | - | chr7.4:3438159-3438178 | None:intergenic | 50.0% |
| ! | GGAGGAGGTTGTTTCACCTT+TGG | - | chr7.4:3438141-3438160 | None:intergenic | 50.0% |
| ! | GGAGGCTTTTTGATCACTGG+AGG | - | chr7.4:3438117-3438136 | None:intergenic | 50.0% |
| ! | GGAGGTTGTTTCACCTTTGG+TGG | - | chr7.4:3438138-3438157 | None:intergenic | 50.0% |
| ! | GGCTTTTTGATCACTGGAGG+AGG | - | chr7.4:3438114-3438133 | None:intergenic | 50.0% |
| ! | GGTGGAGGCTTTTTGATCAC+TGG | - | chr7.4:3438120-3438139 | None:intergenic | 50.0% |
| ! | GGTTCTGACTCTGACGAAGA+TGG | + | chr7.4:3439555-3439574 | MS.gene78591:CDS | 50.0% |
| ! | GGTTGTTTCACCTTTGGTGG+AGG | - | chr7.4:3438135-3438154 | None:intergenic | 50.0% |
| ! | GTTCTAGGTCTAGAAGGACC+GGG | - | chr7.4:3439165-3439184 | None:intergenic | 50.0% |
| ! | GTTTTTATCTGGGAGGGGAG+GGG | - | chr7.4:3438721-3438740 | None:intergenic | 50.0% |
| ! | TGGTAATGACAGAGGGTCTC+AGG | + | chr7.4:3439839-3439858 | MS.gene78591:CDS | 50.0% |
| ! | TTTTTATCTGGGAGGGGAGG+GGG | - | chr7.4:3438720-3438739 | None:intergenic | 50.0% |
| !! | GGTGGTGGTGATTCTGAAAC+AGG | - | chr7.4:3436777-3436796 | None:intergenic | 50.0% |
| !! | GTTGTTGTTGGTGATGGTGG+TGG | - | chr7.4:3436795-3436814 | None:intergenic | 50.0% |
| !! | TTTGAGATGATGGAAGCCGG+AGG | + | chr7.4:3437603-3437622 | MS.gene78591:intron | 50.0% |
| !!! | TGGTTTTGGATGCCCCAATG+TGG | + | chr7.4:3437378-3437397 | MS.gene78591:CDS | 50.0% |
| ACGCCCACCTGATGAATTCC+TGG | + | chr7.4:3438870-3438889 | MS.gene78591:CDS | 55.0% | |
| AGGGTTTAAGAGGCGGCGTT+TGG | - | chr7.4:3436562-3436581 | None:intergenic | 55.0% | |
| ATTCGTCATCGTGGGACCCT+GGG | - | chr7.4:3439128-3439147 | None:intergenic | 55.0% | |
| CAACTGTCTCTTGGGACGCT+TGG | - | chr7.4:3438623-3438642 | None:intergenic | 55.0% | |
| CCCAAGAGACAGTTGCTTCC+AGG | + | chr7.4:3438628-3438647 | MS.gene78591:CDS | 55.0% | |
| CCCCAATGTGGACAGAAAGG+TGG | + | chr7.4:3437390-3437409 | MS.gene78591:CDS | 55.0% | |
| CTCAGGGAAGTAACCGTGGT+CGG | + | chr7.4:3440024-3440043 | MS.gene78591:CDS | 55.0% | |
| CTCGAGGAAATGACCGGAGT+AGG | + | chr7.4:3440105-3440124 | MS.gene78591:CDS | 55.0% | |
| GACCAGAGAAGGAAAGGCAG+AGG | + | chr7.4:3439510-3439529 | MS.gene78591:CDS | 55.0% | |
| GACCTCTGCCTTTCCTTCTC+TGG | - | chr7.4:3439515-3439534 | None:intergenic | 55.0% | |
| GAGGGTCTCGAGGAAATGAC+CGG | + | chr7.4:3440099-3440118 | MS.gene78591:CDS | 55.0% | |
| GGAATTTGTGCATCCGTGGC+CGG | + | chr7.4:3436890-3436909 | MS.gene78591:CDS | 55.0% | |
| GGCAAGAGGTTTCCAATGCC+TGG | + | chr7.4:3438953-3438972 | MS.gene78591:CDS | 55.0% | |
| GGGAATGATAGAGGGTCTCG+AGG | + | chr7.4:3440089-3440108 | MS.gene78591:CDS | 55.0% | |
| TAAGATGGGCAGTCGGCAAG+AGG | + | chr7.4:3438939-3438958 | MS.gene78591:CDS | 55.0% | |
| TATTCGTCATCGTGGGACCC+TGG | - | chr7.4:3439129-3439148 | None:intergenic | 55.0% | |
| TCCCGTCCAACACGTCTCTT+TGG | - | chr7.4:3438168-3438187 | None:intergenic | 55.0% | |
| TCTGACGAAGATGGCAGTGC+TGG | + | chr7.4:3439564-3439583 | MS.gene78591:CDS | 55.0% | |
| TCTGGTCGGCAGCAGAAACA+TGG | - | chr7.4:3439497-3439516 | None:intergenic | 55.0% | |
| TTTCTGCTGCCGACCAGAGA+AGG | + | chr7.4:3439499-3439518 | MS.gene78591:CDS | 55.0% | |
| ! | CGTCTCTTTGGACTAGGAGG+AGG | - | chr7.4:3438156-3438175 | None:intergenic | 55.0% |
| ! | TTTCAGGTCGTTGTCGAGGC+AGG | + | chr7.4:3437339-3437358 | MS.gene78591:intron | 55.0% |
| !! | CGAAGAATAGGAGCGTCCCA+GGG | + | chr7.4:3439109-3439128 | MS.gene78591:CDS | 55.0% |
| !! | GTTGTTGGTGATGGTGGTGG+TGG | - | chr7.4:3436792-3436811 | None:intergenic | 55.0% |
| AGGTCTAGAAGGACCGGGAC+CGG | - | chr7.4:3439160-3439179 | None:intergenic | 60.0% | |
| GCTGCCGACCAGAGAAGGAA+AGG | + | chr7.4:3439504-3439523 | MS.gene78591:CDS | 60.0% | |
| GGGTCTCAGGGAAGTAACCG+TGG | + | chr7.4:3439771-3439790 | MS.gene78591:CDS | 60.0% | |
| TTGTGCATCCGTGGCCGGAA+TGG | + | chr7.4:3436895-3436914 | MS.gene78591:CDS | 60.0% | |
| !! | GCGAAGAATAGGAGCGTCCC+AGG | + | chr7.4:3439108-3439127 | MS.gene78591:CDS | 60.0% |
| ACAATGCTCGGCGTGTGGGG+TGG | + | chr7.4:3439073-3439092 | MS.gene78591:CDS | 65.0% | |
| CAATGCTCGGCGTGTGGGGT+GGG | + | chr7.4:3439074-3439093 | MS.gene78591:CDS | 65.0% | |
| ! | GATGACAGGGAGCACGGCAG+AGG | + | chr7.4:3440137-3440156 | MS.gene78591:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3436528 | 3440235 | 3436528 | ID=MS.gene78591 |
| chr7.4 | mRNA | 3436528 | 3440235 | 3436528 | ID=MS.gene78591.t1;Parent=MS.gene78591 |
| chr7.4 | exon | 3436528 | 3437111 | 3436528 | ID=MS.gene78591.t1.exon1;Parent=MS.gene78591.t1 |
| chr7.4 | CDS | 3436528 | 3437111 | 3436528 | ID=cds.MS.gene78591.t1;Parent=MS.gene78591.t1 |
| chr7.4 | exon | 3437345 | 3437462 | 3437345 | ID=MS.gene78591.t1.exon2;Parent=MS.gene78591.t1 |
| chr7.4 | CDS | 3437345 | 3437462 | 3437345 | ID=cds.MS.gene78591.t1;Parent=MS.gene78591.t1 |
| chr7.4 | exon | 3437871 | 3438226 | 3437871 | ID=MS.gene78591.t1.exon3;Parent=MS.gene78591.t1 |
| chr7.4 | CDS | 3437871 | 3438226 | 3437871 | ID=cds.MS.gene78591.t1;Parent=MS.gene78591.t1 |
| chr7.4 | exon | 3438570 | 3438668 | 3438570 | ID=MS.gene78591.t1.exon4;Parent=MS.gene78591.t1 |
| chr7.4 | CDS | 3438570 | 3438668 | 3438570 | ID=cds.MS.gene78591.t1;Parent=MS.gene78591.t1 |
| chr7.4 | exon | 3438816 | 3440235 | 3438816 | ID=MS.gene78591.t1.exon5;Parent=MS.gene78591.t1 |
| chr7.4 | CDS | 3438816 | 3440235 | 3438816 | ID=cds.MS.gene78591.t1;Parent=MS.gene78591.t1 |
| Gene Sequence |
| Protein sequence |
