AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051363


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051363.t1 MTR_7g103840 80.513 780 54 6 2 683 249 1028 0.0 1218
MS.gene051363.t1 MTR_7g103840 80.438 777 54 6 2 680 247 1023 0.0 1212
MS.gene051363.t1 MTR_1g061130 42.432 806 308 23 2 683 248 1021 1.77e-167 507
MS.gene051363.t1 MTR_1g061130 42.341 803 307 23 2 680 248 1018 3.07e-166 504
MS.gene051363.t1 MTR_6g011450 37.795 127 73 4 551 673 554 678 3.37e-19 92.4
MS.gene051363.t1 MTR_6g011450 36.691 139 80 5 541 673 680 816 7.46e-19 91.7
MS.gene051363.t1 MTR_6g011470 37.037 135 69 6 545 670 83 210 9.19e-17 80.1
MS.gene051363.t1 MTR_4g073340 35.433 127 76 4 551 673 373 497 1.74e-16 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051363.t1 AT2G36480 42.308 130 68 3 545 674 826 948 5.35e-25 111
MS.gene051363.t1 AT2G36480 42.308 130 68 3 545 674 826 948 5.35e-25 111
MS.gene051363.t1 AT4G04885 37.162 148 73 6 530 668 652 788 1.67e-22 103
MS.gene051363.t1 AT1G66500 30.435 138 77 5 540 669 261 387 1.85e-12 70.1
MS.gene051363.t1 AT5G43620 30.921 152 75 6 530 669 248 381 1.87e-12 70.1

Find 186 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCTCGTAATTGATTTAT+TGG 0.142148 7.3:+10177252 None:intergenic
TTGCTGCTGTCCCGTAATTT+TGG 0.160595 7.3:+10177720 None:intergenic
AGCTGCTGTTGCTGAGGTTT+TGG 0.194493 7.3:+10177415 None:intergenic
CCCTCCTTCGATGCGTAATT+TGG 0.215915 7.3:-10177611 MS.gene051363:CDS
ACCTGGCTTCATATTCAATT+TGG 0.235053 7.3:+10177852 None:intergenic
TTCTAGTGTTTCAAATAGTT+TGG 0.249454 7.3:-10179173 MS.gene051363:CDS
TCTTAAAACATCTCAACATT+TGG 0.272228 7.3:-10177566 MS.gene051363:CDS
TTATTAACCTTTGTTCCAAT+TGG 0.272469 7.3:+10177962 None:intergenic
CCCGACCACATTAATTTCTT+CGG 0.274359 7.3:-10177167 MS.gene051363:CDS
CTACTTTCCATCTCGCTATC+TGG 0.283979 7.3:+10176279 None:intergenic
AGTAACTGTCCATCTCAAAT+AGG 0.286697 7.3:-10177220 MS.gene051363:CDS
CCGACCACATTAATTTCTTC+GGG 0.290620 7.3:-10177166 MS.gene051363:CDS
TGCCATTCGTTCCAATGTTC+AGG 0.291207 7.3:-10177506 MS.gene051363:CDS
GCCTTCCCTTGCGGTAGTTT+TGG 0.294785 7.3:+10177094 None:intergenic
AGCACCGAAGTCTGTGAATT+TGG 0.302197 7.3:-10179044 MS.gene051363:CDS
GGAGGGTTGCGTATTGTTAC+TGG 0.318530 7.3:+10177628 None:intergenic
TTCCAATTGGGTGTGTGATT+TGG 0.329546 7.3:+10177975 None:intergenic
CTTCTCGTAATTGATTTATT+GGG 0.331979 7.3:+10177253 None:intergenic
AATAGGAATGTCCAAAATTA+CGG 0.342563 7.3:-10177731 MS.gene051363:CDS
TATTAACCTTTGTTCCAATT+GGG 0.351939 7.3:+10177963 None:intergenic
TAAAGGAGTATTTGATGATA+TGG 0.354621 7.3:-10179460 MS.gene051363:CDS
ACCATTTCTTTGCCCGGATA+AGG 0.361597 7.3:+10179099 None:intergenic
GTTTCAAATAGTTTGGGTTC+AGG 0.366649 7.3:-10179166 MS.gene051363:CDS
ATATTTGTTTCTGCTCCTAA+TGG 0.366883 7.3:-10177820 MS.gene051363:CDS
GAATGCTTGGGTAAGCCATT+AGG 0.372033 7.3:+10177805 None:intergenic
AGCCGAAGAGTTTGAATGCT+TGG 0.373693 7.3:+10177792 None:intergenic
GGTGTTGCAGAGACCTTATC+CGG 0.374381 7.3:-10179112 MS.gene051363:CDS
CTTAAAACATCTCAACATTT+GGG 0.380724 7.3:-10177565 MS.gene051363:CDS
ATTGGAACAAAGGTTAATAA+AGG 0.381415 7.3:-10177959 MS.gene051363:CDS
GGGTGCTGCACGTCCATGGC+TGG 0.382360 7.3:-10179385 MS.gene051363:CDS
TCTAGTGTTTCAAATAGTTT+GGG 0.389260 7.3:-10179172 MS.gene051363:CDS
AGCATCATCTGCCTCAATTC+TGG 0.390784 7.3:+10176788 None:intergenic
TGACAGCAATGCTTTCAGTT+TGG 0.399143 7.3:+10176868 None:intergenic
GTCACTTTGGCTTTGACTAA+AGG 0.406869 7.3:+10177334 None:intergenic
AAGAAACAACTACCATCATC+TGG 0.408434 7.3:-10177923 MS.gene051363:CDS
GAGAGGCCAGATCGAGCTTT+GGG 0.416284 7.3:-10179405 MS.gene051363:CDS
TCTATGCCGCATACAACAAT+AGG 0.416550 7.3:-10177748 MS.gene051363:CDS
AAAACCTCAGCAACAGCAGC+TGG 0.418357 7.3:-10177413 MS.gene051363:CDS
ACTGGGACAGCTGAAGAAAC+AGG 0.419209 7.3:+10176819 None:intergenic
AGAGAGGCCAGATCGAGCTT+TGG 0.423688 7.3:-10179406 MS.gene051363:CDS
ACAAAAGAAAGAGAACAAAA+TGG 0.424354 7.3:-10176561 MS.gene051363:CDS
TAAATCAATTACGAGAAGTC+TGG 0.426887 7.3:-10177248 MS.gene051363:CDS
CAATTGGGTGTGTGATTTGG+AGG 0.427496 7.3:+10177978 None:intergenic
TAAAACAGACGGGAGTCAAT+TGG 0.428390 7.3:-10176424 MS.gene051363:CDS
CCGAAGAAATTAATGTGGTC+GGG 0.430521 7.3:+10177167 None:intergenic
ACCTTATCCGGGCAAAGAAA+TGG 0.430710 7.3:-10179100 MS.gene051363:CDS
TCTCGCTATCTGGATTGTTC+AGG 0.430835 7.3:+10176289 None:intergenic
CTCCAAATCACACACCCAAT+TGG 0.432800 7.3:-10177977 MS.gene051363:CDS
AGCTGATGCACCACGATTGT+TGG 0.437300 7.3:+10177030 None:intergenic
TTCATATTCAATTTGGCACT+TGG 0.438918 7.3:+10177859 None:intergenic
GGGTTTAAGCCTACTCGGTC+AGG 0.439200 7.3:-10177199 MS.gene051363:CDS
GTAACTGTCCATCTCAAATA+GGG 0.440250 7.3:-10177219 MS.gene051363:CDS
GCCGAAGAGTTTGAATGCTT+GGG 0.441872 7.3:+10177793 None:intergenic
ACATCAGATGACTGGATTGC+TGG 0.443441 7.3:-10176507 MS.gene051363:CDS
GGTTCAGGTGTTGGAAGAAC+CGG 0.446940 7.3:-10179151 MS.gene051363:CDS
AAGAGCATCGGCGGAGCCTA+TGG 0.447109 7.3:-10179211 MS.gene051363:CDS
GCAGTGCAATGTCAAAGAAC+TGG 0.449666 7.3:-10179003 MS.gene051363:CDS
CACGTCCATGGCTGGATCCT+AGG 0.451919 7.3:-10179377 MS.gene051363:CDS
CTTTGGGTGCTGCACGTCCA+TGG 0.452816 7.3:-10179389 MS.gene051363:CDS
GCAGCACCCAAAGCTCGATC+TGG 0.453817 7.3:+10179399 None:intergenic
AGAGTAGGTGAATAATCATT+TGG 0.453893 7.3:+10177118 None:intergenic
GGGTCTCCCGCCGCGTCACT+AGG 0.453960 7.3:-10177145 MS.gene051363:CDS
CGATTGTTGGAGGAAGTAGA+TGG 0.455761 7.3:+10177043 None:intergenic
ACCCAAGCATTCAAACTCTT+CGG 0.461263 7.3:-10177794 MS.gene051363:CDS
TCATGGGAGTTTGCAGAAGC+AGG 0.467649 7.3:-10177884 MS.gene051363:CDS
AGAGGAGTTCATGTGGGATG+AGG 0.471007 7.3:-10178966 MS.gene051363:CDS
ACAGAAATTAGAAATCTCAT+TGG 0.476065 7.3:-10176729 MS.gene051363:CDS
GGGAGCATTCATCATTATCA+TGG 0.478005 7.3:-10177901 MS.gene051363:CDS
ATCACAAGAGAAGGATATGC+GGG 0.481020 7.3:-10177467 MS.gene051363:CDS
AATAGTTTGGGTTCAGGTGT+TGG 0.482447 7.3:-10179160 MS.gene051363:CDS
AAACTACCGCAAGGGAAGGC+TGG 0.484966 7.3:-10177091 MS.gene051363:CDS
GAAACAGGAACTGAAGCAAC+TGG 0.498254 7.3:+10176834 None:intergenic
AAGGGACGAGTGGATGTTCA+AGG 0.500865 7.3:-10176322 MS.gene051363:CDS
AGATGACTGGATTGCTGGCA+AGG 0.501201 7.3:-10176502 MS.gene051363:CDS
ACAGCAGCTGGGTTCTTCAC+AGG 0.503314 7.3:-10177401 MS.gene051363:CDS
ATAGGAATGTCCAAAATTAC+GGG 0.506569 7.3:-10177730 MS.gene051363:CDS
CGTATTGTTACTGGCACTGT+TGG 0.506761 7.3:+10177637 None:intergenic
CGGGAGTCAATTGGACACTA+TGG 0.507853 7.3:-10176415 MS.gene051363:CDS
GCTGAAACCATTTCTTTGCC+CGG 0.508129 7.3:+10179093 None:intergenic
AAAGAAGTTGCTAAAGATAA+CGG 0.508160 7.3:+10177442 None:intergenic
AACTGAAGCAACTGGTAAAG+AGG 0.508176 7.3:+10176842 None:intergenic
GCCAAATTGAATATGAAGCC+AGG 0.515735 7.3:-10177853 MS.gene051363:CDS
TCATATTCAATTTGGCACTT+GGG 0.516765 7.3:+10177860 None:intergenic
GGCTTAAACCCTATTTGAGA+TGG 0.516828 7.3:+10177211 None:intergenic
ACCGCCAATGAGCCTACTTC+CGG 0.517406 7.3:+10179132 None:intergenic
CAAGTTACCAACCTGAACAT+TGG 0.518895 7.3:+10177495 None:intergenic
ATTTGAAGATGTATACTGTC+AGG 0.519071 7.3:-10176346 MS.gene051363:CDS
AGTAAAATCTTCCAGAATTG+AGG 0.520874 7.3:-10176799 MS.gene051363:CDS
GGAGTATTTGATGATATGGC+TGG 0.521125 7.3:-10179456 MS.gene051363:CDS
GATCGCATCACCGTCTCACT+TGG 0.525025 7.3:+10176897 None:intergenic
GAAATTAATGTGGTCGGGGA+AGG 0.526098 7.3:+10177172 None:intergenic
AGAACCGGAAGTAGGCTCAT+TGG 0.529221 7.3:-10179136 MS.gene051363:CDS
CACACAATACACACAAGCAT+TGG 0.529437 7.3:+10176376 None:intergenic
GCCAAATTACGCATCGAAGG+AGG 0.530494 7.3:+10177610 None:intergenic
ATTGGAACGAATGGCAGGCA+CGG 0.530926 7.3:+10177513 None:intergenic
CCCGAAGAAATTAATGTGGT+CGG 0.531341 7.3:+10177166 None:intergenic
CCACTCTTCACAGATGGAGC+TGG 0.531578 7.3:+10177283 None:intergenic
ATTTGGATGCACATAGCATA+AGG 0.533715 7.3:-10179027 MS.gene051363:CDS
CAAGCATCTAGCATGAATGA+TGG 0.535680 7.3:+10176245 None:intergenic
GGTATGCAACATCAGATGAC+TGG 0.539121 7.3:-10176515 MS.gene051363:CDS
TGTGGGATGAGGTGAACCCT+TGG 0.539370 7.3:-10178955 MS.gene051363:CDS
ACAGCAGCAATTTGATTCTG+AGG 0.540664 7.3:-10177707 MS.gene051363:CDS
ATTATATCCATCGTCTCCAT+AGG 0.554348 7.3:+10179195 None:intergenic
AGAAACAACTACCATCATCT+GGG 0.554703 7.3:-10177922 MS.gene051363:CDS
TGAACATTGGAACGAATGGC+AGG 0.555403 7.3:+10177508 None:intergenic
AATAATCAGCATACTCATAG+AGG 0.555522 7.3:-10179259 MS.gene051363:CDS
AGATGTATACTGTCAGGAAA+GGG 0.555729 7.3:-10176340 MS.gene051363:CDS
GACATTCCTATTGTTGTATG+CGG 0.557470 7.3:+10177742 None:intergenic
AAGGTGAAGACTGTTCTGAA+GGG 0.558749 7.3:+10177674 None:intergenic
AACCTGAACATTGGAACGAA+TGG 0.559123 7.3:+10177504 None:intergenic
AAAGGTGAAGACTGTTCTGA+AGG 0.560794 7.3:+10177673 None:intergenic
CAGCAGCAATTTGATTCTGA+GGG 0.562116 7.3:-10177706 MS.gene051363:CDS
TATGATGATAATAAAACAGA+CGG 0.562220 7.3:-10176435 MS.gene051363:CDS
CCAAATTACGCATCGAAGGA+GGG 0.563230 7.3:+10177611 None:intergenic
ATGATTCCACTCTTCACAGA+TGG 0.563534 7.3:+10177277 None:intergenic
TTGGAACGAATGGCAGGCAC+GGG 0.563880 7.3:+10177514 None:intergenic
TGATGCACCACGATTGTTGG+AGG 0.564054 7.3:+10177033 None:intergenic
TGATTGTAGCATCAAGAAGA+TGG 0.565765 7.3:-10176536 MS.gene051363:CDS
CACACACCCAATTGGAACAA+AGG 0.567583 7.3:-10177969 MS.gene051363:CDS
CGAAGAAATTAATGTGGTCG+GGG 0.572323 7.3:+10177168 None:intergenic
ATTCGTTCCAATGTTCAGGT+TGG 0.573224 7.3:-10177502 MS.gene051363:CDS
CGAGATGGAAAGTAGAAATG+TGG 0.573826 7.3:-10176271 MS.gene051363:CDS
GCATCCAAATTCACAGACTT+CGG 0.574943 7.3:+10179040 None:intergenic
TTGTCAGATAACTCAATACT+TGG 0.575179 7.3:-10176225 MS.gene051363:CDS
TGAGGCAGATGATGCTGCAA+AGG 0.575199 7.3:-10176781 MS.gene051363:CDS
CTTGCGAAAATCACAAGAGA+AGG 0.578295 7.3:-10177476 MS.gene051363:CDS
AAAGGAGCTTTAGATTTGAG+TGG 0.579334 7.3:+10177352 None:intergenic
ACCGGAAGTAGGCTCATTGG+CGG 0.579906 7.3:-10179133 MS.gene051363:CDS
AAGCATCTAGCATGAATGAT+GGG 0.581668 7.3:+10176246 None:intergenic
AAGATGTATACTGTCAGGAA+AGG 0.582076 7.3:-10176341 MS.gene051363:CDS
GAACCCAGCTGCTGTTGCTG+AGG 0.583698 7.3:+10177409 None:intergenic
GAAGGCTGGAAAGAAGCAAA+AGG 0.584037 7.3:-10177077 MS.gene051363:CDS
GGAGAACCTAGTGACGCGGC+GGG 0.584551 7.3:+10177139 None:intergenic
TGGTAGTTGTTTCTTAACAG+TGG 0.585131 7.3:+10177931 None:intergenic
GAGATGGAAAGTAGAAATGT+GGG 0.585552 7.3:-10176270 MS.gene051363:CDS
GGCGGAGCCTATGGAGACGA+TGG 0.591159 7.3:-10179202 MS.gene051363:CDS
GGGACGAGTGGATGTTCAAG+GGG 0.591895 7.3:-10176320 MS.gene051363:CDS
AAGACAGTTTAATAGACACT+TGG 0.594703 7.3:-10176595 MS.gene051363:intron
GTGTTGGAAGAACCGGAAGT+AGG 0.595103 7.3:-10179144 MS.gene051363:CDS
ACAAATATTTCTGAGTGACC+TGG 0.595652 7.3:+10177835 None:intergenic
CATACATGCATGTTAAGCCT+AGG 0.595796 7.3:+10179360 None:intergenic
CGACCACATTAATTTCTTCG+GGG 0.597538 7.3:-10177165 MS.gene051363:CDS
TTCTTTCCAGCCTTCCCTTG+CGG 0.598633 7.3:+10177085 None:intergenic
AAATAGGGTTTAAGCCTACT+CGG 0.599873 7.3:-10177204 MS.gene051363:CDS
CCAGCTCCATCTGTGAAGAG+TGG 0.601958 7.3:-10177283 MS.gene051363:CDS
GATGAATGCTCCCCAGATGA+TGG 0.602988 7.3:+10177911 None:intergenic
AGGGACGAGTGGATGTTCAA+GGG 0.609571 7.3:-10176321 MS.gene051363:CDS
CTCTGCCAAAACTACCGCAA+GGG 0.611035 7.3:-10177099 MS.gene051363:CDS
GCCAAAACTACCGCAAGGGA+AGG 0.612070 7.3:-10177095 MS.gene051363:CDS
GGAGCATTCATCATTATCAT+GGG 0.613363 7.3:-10177900 MS.gene051363:CDS
TCTGTTCCTGAAAAGAGCAT+CGG 0.616052 7.3:-10179223 MS.gene051363:CDS
GTACATTATCAGACAAACCA+AGG 0.616456 7.3:+10178938 None:intergenic
ATGATGATAATAAAACAGAC+GGG 0.617056 7.3:-10176434 MS.gene051363:CDS
CGGAGGAAGAGGAGTTCATG+TGG 0.617778 7.3:-10178973 MS.gene051363:CDS
AAAACATCTCAACATTTGGG+TGG 0.617967 7.3:-10177562 MS.gene051363:CDS
ACTCTGCCAAAACTACCGCA+AGG 0.619475 7.3:-10177100 MS.gene051363:CDS
AACTACAGTGCCAAGTGAGA+CGG 0.621357 7.3:-10176907 MS.gene051363:CDS
AGGTGAAGACTGTTCTGAAG+GGG 0.621418 7.3:+10177675 None:intergenic
AAACCTCAGCAACAGCAGCT+GGG 0.621875 7.3:-10177412 MS.gene051363:CDS
TTTAAGCCTACTCGGTCAGG+TGG 0.622249 7.3:-10177196 MS.gene051363:CDS
GTTGGAGACTGTTGTCGCAA+AGG 0.627501 7.3:+10177655 None:intergenic
AGTTTAATAGACACTTGGAA+TGG 0.631756 7.3:-10176590 MS.gene051363:CDS
GTTCCTGAAAAGAGCATCGG+CGG 0.634573 7.3:-10179220 MS.gene051363:CDS
GTGTTGCAGAGACCTTATCC+GGG 0.636826 7.3:-10179111 MS.gene051363:CDS
TCAGCCAAATTACGCATCGA+AGG 0.643348 7.3:+10177607 None:intergenic
TACATTATCAGACAAACCAA+GGG 0.650335 7.3:+10178939 None:intergenic
ATTCAAACTCTTCGGCTGCG+AGG 0.652349 7.3:-10177786 MS.gene051363:CDS
TGATTGAGACAAGGCAAGCG+AGG 0.653277 7.3:+10176758 None:intergenic
GAAGGACCACCTGACCGAGT+AGG 0.653335 7.3:+10177190 None:intergenic
TGTGCTAGTTGATTGAGACA+AGG 0.659929 7.3:+10176749 None:intergenic
GAACAATCCAGATAGCGAGA+TGG 0.661154 7.3:-10176286 MS.gene051363:CDS
ACTGTCAGGAAAGGGACGAG+TGG 0.661605 7.3:-10176332 MS.gene051363:CDS
TCTACTTCCTCCAACAATCG+TGG 0.664631 7.3:-10177040 MS.gene051363:intron
GGAGGAAGAGGAGTTCATGT+GGG 0.666115 7.3:-10178972 MS.gene051363:CDS
AATCACAAGAGAAGGATATG+CGG 0.670294 7.3:-10177468 MS.gene051363:CDS
ATGCAAATGAAGACGCAGAG+AGG 0.671037 7.3:-10179422 MS.gene051363:CDS
AGCAGCAATTTGATTCTGAG+GGG 0.679911 7.3:-10177705 MS.gene051363:CDS
TGGAGAACCTAGTGACGCGG+CGG 0.688959 7.3:+10177138 None:intergenic
GAAACAACTACCATCATCTG+GGG 0.689562 7.3:-10177921 MS.gene051363:CDS
TTAAGCCTAGGATCCAGCCA+TGG 0.699790 7.3:+10179372 None:intergenic
AGACCCCGAAGAAATTAATG+TGG 0.705849 7.3:+10177162 None:intergenic
AGATGGAAAGTAGAAATGTG+GGG 0.706843 7.3:-10176269 MS.gene051363:CDS
GGACGAGTGGATGTTCAAGG+GGG 0.711357 7.3:-10176319 MS.gene051363:CDS
CAATGCTTGTGTGTATTGTG+TGG 0.715495 7.3:-10176375 MS.gene051363:CDS
TCACAAGAGAAGGATATGCG+GGG 0.724395 7.3:-10177466 MS.gene051363:CDS
ATTTGGAGAACCTAGTGACG+CGG 0.733407 7.3:+10177135 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAGTAATTTCATTAAT+TGG + chr7.3:10177399-10177418 None:intergenic 10.0%
!!! GTTATCATATTTTAATAGAA+TGG - chr7.3:10176254-10176273 MS.gene051363:CDS 15.0%
!!! TTTTTTAAGTCAACAAAATT+AGG + chr7.3:10177284-10177303 None:intergenic 15.0%
!! AAATTAGGAAATTATGTCTT+AGG + chr7.3:10177339-10177358 None:intergenic 20.0%
!! AATTATGTCTTAGGTTTATT+AGG + chr7.3:10177330-10177349 None:intergenic 20.0%
!! CATAATTTCCTAATTTAACT+TGG - chr7.3:10177343-10177362 MS.gene051363:CDS 20.0%
!! GATAATTATGATTTAGTTAC+AGG + chr7.3:10177430-10177449 None:intergenic 20.0%
!! TATGATGATAATAAAACAGA+CGG - chr7.3:10179113-10179132 MS.gene051363:CDS 20.0%
!! TTTGTAAATTTCTAACTTGA+AGG + chr7.3:10176828-10176847 None:intergenic 20.0%
!!! TTAGTCTATTTGAATTTTGA+AGG - chr7.3:10179413-10179432 MS.gene051363:CDS 20.0%
! AAAGAAGTTGCTAAAGATAA+CGG + chr7.3:10178109-10178128 None:intergenic 25.0%
! AAGACTCATAGTTAATTGAA+TGG - chr7.3:10179361-10179380 MS.gene051363:intron 25.0%
! AAGTAAATGTCTATCACAAT+AGG - chr7.3:10177115-10177134 MS.gene051363:CDS 25.0%
! AATAATTCTTCGATTACATG+TGG + chr7.3:10178883-10178902 None:intergenic 25.0%
! AATAGGAATGTCCAAAATTA+CGG - chr7.3:10177817-10177836 MS.gene051363:CDS 25.0%
! ACAAAAGAAAGAGAACAAAA+TGG - chr7.3:10178987-10179006 MS.gene051363:CDS 25.0%
! ACAGAAATTAGAAATCTCAT+TGG - chr7.3:10178819-10178838 MS.gene051363:intron 25.0%
! ACAGATTGAATAGTATAAAG+AGG + chr7.3:10176232-10176251 None:intergenic 25.0%
! ACATGTAATCGAAGAATTAT+TGG - chr7.3:10178882-10178901 MS.gene051363:intron 25.0%
! AGTAAATGTCTATCACAATA+GGG - chr7.3:10177116-10177135 MS.gene051363:CDS 25.0%
! ATAATTCTTCGATTACATGT+GGG + chr7.3:10178882-10178901 None:intergenic 25.0%
! ATCTTATGCCAAGTTAAATT+AGG + chr7.3:10177354-10177373 None:intergenic 25.0%
! ATGATGATAATAAAACAGAC+GGG - chr7.3:10179114-10179133 MS.gene051363:CDS 25.0%
! ATTGGAACAAAGGTTAATAA+AGG - chr7.3:10177589-10177608 MS.gene051363:CDS 25.0%
! CTTAAAACATCTCAACATTT+GGG - chr7.3:10177983-10178002 MS.gene051363:CDS 25.0%
! GATTTGAAAAACTATGTTTG+AGG + chr7.3:10176480-10176499 None:intergenic 25.0%
! TAATTGGGAAAAAACTGAAT+TGG + chr7.3:10176745-10176764 None:intergenic 25.0%
! TATTAACCTTTGTTCCAATT+GGG + chr7.3:10177588-10177607 None:intergenic 25.0%
! TCTAGTGTTTCAAATAGTTT+GGG - chr7.3:10176376-10176395 MS.gene051363:CDS 25.0%
! TCTTAAAACATCTCAACATT+TGG - chr7.3:10177982-10178001 MS.gene051363:CDS 25.0%
! TTATTAACCTTTGTTCCAAT+TGG + chr7.3:10177589-10177608 None:intergenic 25.0%
! TTCTAGTGTTTCAAATAGTT+TGG - chr7.3:10176375-10176394 MS.gene051363:CDS 25.0%
!! AAGATTTGAAATTGGATTCA+AGG + chr7.3:10178572-10178591 None:intergenic 25.0%
!! ACTTCTCGTAATTGATTTAT+TGG + chr7.3:10178299-10178318 None:intergenic 25.0%
!! AGCAACAAAATTTTTGTATC+AGG - chr7.3:10177157-10177176 MS.gene051363:CDS 25.0%
!! CTTCTCGTAATTGATTTATT+GGG + chr7.3:10178298-10178317 None:intergenic 25.0%
!! GATTGATTCTTCCAATTAAT+CGG + chr7.3:10177020-10177039 None:intergenic 25.0%
!! TTTTTCCCAATTATGAAATG+AGG - chr7.3:10176752-10176771 MS.gene051363:CDS 25.0%
!!! ATGTCATCATATTTCAAGTT+GGG + chr7.3:10177043-10177062 None:intergenic 25.0%
!!! GTTCAAATTTTTGTACTGAT+TGG - chr7.3:10179439-10179458 MS.gene051363:CDS 25.0%
!!! TAAAGGAGTATTTGATGATA+TGG - chr7.3:10176088-10176107 MS.gene051363:intron 25.0%
AACATGACAAAATGCTTGAT+CGG - chr7.3:10177091-10177110 MS.gene051363:CDS 30.0%
AAGACAGTTTAATAGACACT+TGG - chr7.3:10178953-10178972 MS.gene051363:CDS 30.0%
AAGCACCTCATTTCATAATT+GGG + chr7.3:10176760-10176779 None:intergenic 30.0%
AATAATCAGCATACTCATAG+AGG - chr7.3:10176289-10176308 MS.gene051363:CDS 30.0%
AATTTCTAACTTGAAGGACA+AGG + chr7.3:10176822-10176841 None:intergenic 30.0%
ACTGAATTGGACAAACAAAT+TGG + chr7.3:10176732-10176751 None:intergenic 30.0%
AGAGTAGGTGAATAATCATT+TGG + chr7.3:10178433-10178452 None:intergenic 30.0%
AGTAAAATCTTCCAGAATTG+AGG - chr7.3:10178749-10178768 MS.gene051363:intron 30.0%
AGTAAAGCAAACTAAAGAAG+AGG - chr7.3:10177066-10177085 MS.gene051363:CDS 30.0%
AGTTTAATAGACACTTGGAA+TGG - chr7.3:10178958-10178977 MS.gene051363:CDS 30.0%
ATAGGAATGTCCAAAATTAC+GGG - chr7.3:10177818-10177837 MS.gene051363:CDS 30.0%
ATTGCCATAAAATTACTTGC+AGG + chr7.3:10176863-10176882 None:intergenic 30.0%
ATTTCTAACTTGAAGGACAA+GGG + chr7.3:10176821-10176840 None:intergenic 30.0%
ATTTGAAGATGTATACTGTC+AGG - chr7.3:10179202-10179221 MS.gene051363:CDS 30.0%
CAAAACAAGGTAGATCAAAT+TGG + chr7.3:10176784-10176803 None:intergenic 30.0%
CACATTCCAAAAACAAAACA+AGG + chr7.3:10176797-10176816 None:intergenic 30.0%
CTGAATTGGACAAACAAATT+GGG + chr7.3:10176731-10176750 None:intergenic 30.0%
CTGCATGCAAAAAACAAAAT+TGG + chr7.3:10177536-10177555 None:intergenic 30.0%
GTAAAGCAAACTAAAGAAGA+GGG - chr7.3:10177067-10177086 MS.gene051363:CDS 30.0%
GTCAAAGAACTGGAAAAATT+CGG - chr7.3:10176555-10176574 MS.gene051363:CDS 30.0%
TAAATCAATTACGAGAAGTC+TGG - chr7.3:10178300-10178319 MS.gene051363:intron 30.0%
TACATTATCAGACAAACCAA+GGG + chr7.3:10176612-10176631 None:intergenic 30.0%
TAGGCATATTTATTATCCCA+CGG + chr7.3:10177265-10177284 None:intergenic 30.0%
TCATATTCAATTTGGCACTT+GGG + chr7.3:10177691-10177710 None:intergenic 30.0%
TTCATATTCAATTTGGCACT+TGG + chr7.3:10177692-10177711 None:intergenic 30.0%
TTGTCAGATAACTCAATACT+TGG - chr7.3:10179323-10179342 MS.gene051363:intron 30.0%
! AAAGCACCTCATTTCATAAT+TGG + chr7.3:10176761-10176780 None:intergenic 30.0%
! ATTCAAGGTATTCTTATTGG+CGG + chr7.3:10178557-10178576 None:intergenic 30.0%
! ATTTTTATCAAAACCAGCCA+GGG + chr7.3:10176905-10176924 None:intergenic 30.0%
! CGAGCTTAAAGATTTGAAAT+TGG + chr7.3:10178580-10178599 None:intergenic 30.0%
! GATGTCATCATATTTCAAGT+TGG + chr7.3:10177044-10177063 None:intergenic 30.0%
! TGGATTCAAGGTATTCTTAT+TGG + chr7.3:10178560-10178579 None:intergenic 30.0%
!! ATATTTGTTTCTGCTCCTAA+TGG - chr7.3:10177728-10177747 MS.gene051363:CDS 30.0%
!! CAATTCTGGAAGATTTTACT+GGG + chr7.3:10178749-10178768 None:intergenic 30.0%
!! CACAAATGAATTTTCAAGAC+AGG + chr7.3:10176989-10177008 None:intergenic 30.0%
!! TCAATTCTGGAAGATTTTAC+TGG + chr7.3:10178750-10178769 None:intergenic 30.0%
!! TGTCATCATATTTCAAGTTG+GGG + chr7.3:10177042-10177061 None:intergenic 30.0%
!!! CAATTTTGTTTTTTGCATGC+AGG - chr7.3:10177534-10177553 MS.gene051363:CDS 30.0%
!!! GATCTACCTTGTTTTGTTTT+TGG - chr7.3:10176788-10176807 MS.gene051363:CDS 30.0%
!!! TGAGATGTTTTAAGAGATGT+TGG + chr7.3:10177977-10177996 None:intergenic 30.0%
AAAACATCTCAACATTTGGG+TGG - chr7.3:10177986-10178005 MS.gene051363:intron 35.0%
AAAGAACTGGAAAAATTCGG+AGG - chr7.3:10176558-10176577 MS.gene051363:CDS 35.0%
AAATAGGGTTTAAGCCTACT+CGG - chr7.3:10178344-10178363 MS.gene051363:intron 35.0%
AAATGTCTATCACAATAGGG+TGG - chr7.3:10177119-10177138 MS.gene051363:CDS 35.0%
AAGAAACAACTACCATCATC+TGG - chr7.3:10177625-10177644 MS.gene051363:CDS 35.0%
AAGATGTATACTGTCAGGAA+AGG - chr7.3:10179207-10179226 MS.gene051363:CDS 35.0%
AAGCATCTAGCATGAATGAT+GGG + chr7.3:10179305-10179324 None:intergenic 35.0%
AATCACAAGAGAAGGATATG+CGG - chr7.3:10178080-10178099 MS.gene051363:intron 35.0%
AATGTCTATCACAATAGGGT+GGG - chr7.3:10177120-10177139 MS.gene051363:CDS 35.0%
ACCTGGCTTCATATTCAATT+TGG + chr7.3:10177699-10177718 None:intergenic 35.0%
AGAAACAACTACCATCATCT+GGG - chr7.3:10177626-10177645 MS.gene051363:CDS 35.0%
AGATGGAAAGTAGAAATGTG+GGG - chr7.3:10179279-10179298 MS.gene051363:intron 35.0%
AGATGTATACTGTCAGGAAA+GGG - chr7.3:10179208-10179227 MS.gene051363:CDS 35.0%
AGTAACTGTCCATCTCAAAT+AGG - chr7.3:10178328-10178347 MS.gene051363:intron 35.0%
ATTATATCCATCGTCTCCAT+AGG + chr7.3:10176356-10176375 None:intergenic 35.0%
ATTTGGATGCACATAGCATA+AGG - chr7.3:10176521-10176540 MS.gene051363:CDS 35.0%
GACATTCCTATTGTTGTATG+CGG + chr7.3:10177809-10177828 None:intergenic 35.0%
GAGATGGAAAGTAGAAATGT+GGG - chr7.3:10179278-10179297 MS.gene051363:intron 35.0%
GCTTACCAAATTGTCTTCAT+CGG + chr7.3:10176675-10176694 None:intergenic 35.0%
GTAACTGTCCATCTCAAATA+GGG - chr7.3:10178329-10178348 MS.gene051363:intron 35.0%
GTACATTATCAGACAAACCA+AGG + chr7.3:10176613-10176632 None:intergenic 35.0%
TGATTGTAGCATCAAGAAGA+TGG - chr7.3:10179012-10179031 MS.gene051363:CDS 35.0%
! ACAAATATTTCTGAGTGACC+TGG + chr7.3:10177716-10177735 None:intergenic 35.0%
! CATTTTTATCAAAACCAGCC+AGG + chr7.3:10176906-10176925 None:intergenic 35.0%
! CTCAAGTTGTTAGAGACATT+AGG + chr7.3:10176635-10176654 None:intergenic 35.0%
! GCATCCTGCAAGTAATTTTA+TGG - chr7.3:10176856-10176875 MS.gene051363:CDS 35.0%
! GGAGCATTCATCATTATCAT+GGG - chr7.3:10177648-10177667 MS.gene051363:CDS 35.0%
! GTTTCAAATAGTTTGGGTTC+AGG - chr7.3:10176382-10176401 MS.gene051363:CDS 35.0%
!! AAAGGAGCTTTAGATTTGAG+TGG + chr7.3:10178199-10178218 None:intergenic 35.0%
!! GGTAAGCTTGCTACAATAAA+GGG - chr7.3:10176688-10176707 MS.gene051363:intron 35.0%
!! TGGTAAGCTTGCTACAATAA+AGG - chr7.3:10176687-10176706 MS.gene051363:intron 35.0%
!! TGGTAGTTGTTTCTTAACAG+TGG + chr7.3:10177620-10177639 None:intergenic 35.0%
!!! AGAAATTGACTTGTCGCTTT+TGG - chr7.3:10176933-10176952 MS.gene051363:intron 35.0%
!!! TGACTTTTCTGAAGTCACTT+TGG + chr7.3:10178230-10178249 None:intergenic 35.0%
AAAGGTGAAGACTGTTCTGA+AGG + chr7.3:10177878-10177897 None:intergenic 40.0%
AACCTGAACATTGGAACGAA+TGG + chr7.3:10178047-10178066 None:intergenic 40.0%
AACTGAAGCAACTGGTAAAG+AGG + chr7.3:10178709-10178728 None:intergenic 40.0%
ACAGCAGCAATTTGATTCTG+AGG - chr7.3:10177841-10177860 MS.gene051363:CDS 40.0%
ACCCAAGCATTCAAACTCTT+CGG - chr7.3:10177754-10177773 MS.gene051363:CDS 40.0%
AGACCCCGAAGAAATTAATG+TGG + chr7.3:10178389-10178408 None:intergenic 40.0%
AGCAGCAATTTGATTCTGAG+GGG - chr7.3:10177843-10177862 MS.gene051363:CDS 40.0%
ATAGGGTGGGAAAGGATAAT+TGG - chr7.3:10177133-10177152 MS.gene051363:CDS 40.0%
ATCACAAGAGAAGGATATGC+GGG - chr7.3:10178081-10178100 MS.gene051363:intron 40.0%
ATGATTCCACTCTTCACAGA+TGG + chr7.3:10178274-10178293 None:intergenic 40.0%
ATTCGTTCCAATGTTCAGGT+TGG - chr7.3:10178046-10178065 MS.gene051363:intron 40.0%
ATTGCGGTGATTGTGGTATT+AGG - chr7.3:10178920-10178939 MS.gene051363:intron 40.0%
CAAGCATCTAGCATGAATGA+TGG + chr7.3:10179306-10179325 None:intergenic 40.0%
CAAGTTACCAACCTGAACAT+TGG + chr7.3:10178056-10178075 None:intergenic 40.0%
CAATGCTTGTGTGTATTGTG+TGG - chr7.3:10179173-10179192 MS.gene051363:CDS 40.0%
CACACAATACACACAAGCAT+TGG + chr7.3:10179175-10179194 None:intergenic 40.0%
CAGCAGCAATTTGATTCTGA+GGG - chr7.3:10177842-10177861 MS.gene051363:CDS 40.0%
CATACATGCATGTTAAGCCT+AGG + chr7.3:10176191-10176210 None:intergenic 40.0%
CCCGAAGAAATTAATGTGGT+CGG + chr7.3:10178385-10178404 None:intergenic 40.0%
CCCGACCACATTAATTTCTT+CGG - chr7.3:10178381-10178400 MS.gene051363:intron 40.0%
CCGAAGAAATTAATGTGGTC+GGG + chr7.3:10178384-10178403 None:intergenic 40.0%
CCGACCACATTAATTTCTTC+GGG - chr7.3:10178382-10178401 MS.gene051363:intron 40.0%
CGAAGAAATTAATGTGGTCG+GGG + chr7.3:10178383-10178402 None:intergenic 40.0%
CGACCACATTAATTTCTTCG+GGG - chr7.3:10178383-10178402 MS.gene051363:intron 40.0%
CGAGATGGAAAGTAGAAATG+TGG - chr7.3:10179277-10179296 MS.gene051363:intron 40.0%
CGTTTCTATGCATCATTCCT+TGG + chr7.3:10177206-10177225 None:intergenic 40.0%
CTTGCGAAAATCACAAGAGA+AGG - chr7.3:10178072-10178091 MS.gene051363:intron 40.0%
GAAACAACTACCATCATCTG+GGG - chr7.3:10177627-10177646 MS.gene051363:CDS 40.0%
GAGTCATGCATAGATGTGAT+TGG + chr7.3:10177239-10177258 None:intergenic 40.0%
GCATCCAAATTCACAGACTT+CGG + chr7.3:10176511-10176530 None:intergenic 40.0%
GCCAAATTGAATATGAAGCC+AGG - chr7.3:10177695-10177714 MS.gene051363:CDS 40.0%
GGCTTAAACCCTATTTGAGA+TGG + chr7.3:10178340-10178359 None:intergenic 40.0%
GTGTGTGAGTTCCGATTAAT+TGG - chr7.3:10177006-10177025 MS.gene051363:intron 40.0%
TAAAACAGACGGGAGTCAAT+TGG - chr7.3:10179124-10179143 MS.gene051363:CDS 40.0%
TAAAGACAGAACTGTGACCA+AGG - chr7.3:10177186-10177205 MS.gene051363:CDS 40.0%
TCTATGCCGCATACAACAAT+AGG - chr7.3:10177800-10177819 MS.gene051363:CDS 40.0%
TGACAGCAATGCTTTCAGTT+TGG + chr7.3:10178683-10178702 None:intergenic 40.0%
TGGTGTAATTGTAGAGTCCT+GGG + chr7.3:10177379-10177398 None:intergenic 40.0%
TGTGCTAGTTGATTGAGACA+AGG + chr7.3:10178802-10178821 None:intergenic 40.0%
TTAAGCTCGTTAGTTGCGAA+AGG - chr7.3:10178591-10178610 MS.gene051363:intron 40.0%
TTATTGGCGGTATTTGAGCT+CGG + chr7.3:10178544-10178563 None:intergenic 40.0%
TTCCAATTGGGTGTGTGATT+TGG + chr7.3:10177576-10177595 None:intergenic 40.0%
TTGGTGTAATTGTAGAGTCC+TGG + chr7.3:10177380-10177399 None:intergenic 40.0%
! AAGGTGAAGACTGTTCTGAA+GGG + chr7.3:10177877-10177896 None:intergenic 40.0%
! AATAGTTTGGGTTCAGGTGT+TGG - chr7.3:10176388-10176407 MS.gene051363:CDS 40.0%
! GGAGTATTTGATGATATGGC+TGG - chr7.3:10176092-10176111 MS.gene051363:intron 40.0%
! TCTGTTCCTGAAAAGAGCAT+CGG - chr7.3:10176325-10176344 MS.gene051363:CDS 40.0%
!! GGGAGCATTCATCATTATCA+TGG - chr7.3:10177647-10177666 MS.gene051363:CDS 40.0%
!! GTCACTTTGGCTTTGACTAA+AGG + chr7.3:10178217-10178236 None:intergenic 40.0%
AACTACAGTGCCAAGTGAGA+CGG - chr7.3:10178641-10178660 MS.gene051363:intron 45.0%
AACTTGGCATAAGATACCCC+AGG - chr7.3:10177359-10177378 MS.gene051363:CDS 45.0%
ACATCAGATGACTGGATTGC+TGG - chr7.3:10179041-10179060 MS.gene051363:CDS 45.0%
ACCATTTCTTTGCCCGGATA+AGG + chr7.3:10176452-10176471 None:intergenic 45.0%
ACCTTATCCGGGCAAAGAAA+TGG - chr7.3:10176448-10176467 MS.gene051363:CDS 45.0%
AGCATCATCTGCCTCAATTC+TGG + chr7.3:10178763-10178782 None:intergenic 45.0%
AGCCGAAGAGTTTGAATGCT+TGG + chr7.3:10177759-10177778 None:intergenic 45.0%
ATGCAAATGAAGACGCAGAG+AGG - chr7.3:10176126-10176145 MS.gene051363:intron 45.0%
ATTGGACCTGCTCTTTATGC+AGG - chr7.3:10179457-10179476 MS.gene051363:CDS 45.0%
ATTTGGAGAACCTAGTGACG+CGG + chr7.3:10178416-10178435 None:intergenic 45.0%
CACAATCACCGCAATGATGT+GGG + chr7.3:10178915-10178934 None:intergenic 45.0%
CACACACCCAATTGGAACAA+AGG - chr7.3:10177579-10177598 MS.gene051363:CDS 45.0%
CATGTTCCTGCATAAAGAGC+AGG + chr7.3:10179466-10179485 None:intergenic 45.0%
CCAAATTACGCATCGAAGGA+GGG + chr7.3:10177940-10177959 None:intergenic 45.0%
CGATTGTTGGAGGAAGTAGA+TGG + chr7.3:10178508-10178527 None:intergenic 45.0%
CGTATTGTTACTGGCACTGT+TGG + chr7.3:10177914-10177933 None:intergenic 45.0%
CTACTTTCCATCTCGCTATC+TGG + chr7.3:10179272-10179291 None:intergenic 45.0%
CTATCACAATAGGGTGGGAA+AGG - chr7.3:10177125-10177144 MS.gene051363:CDS 45.0%
CTATGCATGACTCTTTCCGT+GGG - chr7.3:10177246-10177265 MS.gene051363:CDS 45.0%
CTCCAAATCACACACCCAAT+TGG - chr7.3:10177571-10177590 MS.gene051363:CDS 45.0%
CTGGAAAAATTCGGAGGAAG+AGG - chr7.3:10176564-10176583 MS.gene051363:CDS 45.0%
GAAACAGGAACTGAAGCAAC+TGG + chr7.3:10178717-10178736 None:intergenic 45.0%
GAAATTAATGTGGTCGGGGA+AGG + chr7.3:10178379-10178398 None:intergenic 45.0%
GAACAATCCAGATAGCGAGA+TGG - chr7.3:10179262-10179281 MS.gene051363:CDS 45.0%
GAAGGCTGGAAAGAAGCAAA+AGG - chr7.3:10178471-10178490 MS.gene051363:intron 45.0%
GAATGCTTGGGTAAGCCATT+AGG + chr7.3:10177746-10177765 None:intergenic 45.0%
GATGAACTCCCACATCATTG+CGG - chr7.3:10178904-10178923 MS.gene051363:intron 45.0%
GATGGCCGATGAAGACAATT+TGG - chr7.3:10176667-10176686 MS.gene051363:intron 45.0%
GCAGTGCAATGTCAAAGAAC+TGG - chr7.3:10176545-10176564 MS.gene051363:CDS 45.0%
GCCGAAGAGTTTGAATGCTT+GGG + chr7.3:10177758-10177777 None:intergenic 45.0%
GCGATTTCTCGAATGACATC+AGG + chr7.3:10178858-10178877 None:intergenic 45.0%
GCTGAAACCATTTCTTTGCC+CGG + chr7.3:10176458-10176477 None:intergenic 45.0%
GGTATGCAACATCAGATGAC+TGG - chr7.3:10179033-10179052 MS.gene051363:CDS 45.0%
GGTGTAATTGTAGAGTCCTG+GGG + chr7.3:10177378-10177397 None:intergenic 45.0%
TAATCAAGACCCATTCACCC+TGG - chr7.3:10176885-10176904 MS.gene051363:CDS 45.0%
TCACAAGAGAAGGATATGCG+GGG - chr7.3:10178082-10178101 MS.gene051363:intron 45.0%
TCAGCCAAATTACGCATCGA+AGG + chr7.3:10177944-10177963 None:intergenic 45.0%
TCTACTTCCTCCAACAATCG+TGG - chr7.3:10178508-10178527 MS.gene051363:intron 45.0%
TCTATGCATGACTCTTTCCG+TGG - chr7.3:10177245-10177264 MS.gene051363:CDS 45.0%
TCTCGCTATCTGGATTGTTC+AGG + chr7.3:10179262-10179281 None:intergenic 45.0%
TGAACATTGGAACGAATGGC+AGG + chr7.3:10178043-10178062 None:intergenic 45.0%
TGCCATTCGTTCCAATGTTC+AGG - chr7.3:10178042-10178061 MS.gene051363:intron 45.0%
! AGCACCGAAGTCTGTGAATT+TGG - chr7.3:10176504-10176523 MS.gene051363:CDS 45.0%
! CAATTGGGTGTGTGATTTGG+AGG + chr7.3:10177573-10177592 None:intergenic 45.0%
! TTGCTGCTGTCCCGTAATTT+TGG + chr7.3:10177831-10177850 None:intergenic 45.0%
!! AGGTGAAGACTGTTCTGAAG+GGG + chr7.3:10177876-10177895 None:intergenic 45.0%
AAAACCTCAGCAACAGCAGC+TGG - chr7.3:10178135-10178154 MS.gene051363:intron 50.0%
AAACCTCAGCAACAGCAGCT+GGG - chr7.3:10178136-10178155 MS.gene051363:intron 50.0%
AAGGGACGAGTGGATGTTCA+AGG - chr7.3:10179226-10179245 MS.gene051363:CDS 50.0%
ACAACTTGAGCTCAGACCCA+TGG - chr7.3:10176645-10176664 MS.gene051363:intron 50.0%
ACTCTGCCAAAACTACCGCA+AGG - chr7.3:10178448-10178467 MS.gene051363:intron 50.0%
ACTGGGACAGCTGAAGAAAC+AGG + chr7.3:10178732-10178751 None:intergenic 50.0%
AGAACCGGAAGTAGGCTCAT+TGG - chr7.3:10176412-10176431 MS.gene051363:CDS 50.0%
AGAGGAGTTCATGTGGGATG+AGG - chr7.3:10176582-10176601 MS.gene051363:CDS 50.0%
AGATGACTGGATTGCTGGCA+AGG - chr7.3:10179046-10179065 MS.gene051363:CDS 50.0%
AGCTGATGCACCACGATTGT+TGG + chr7.3:10178521-10178540 None:intergenic 50.0%
AGGGACGAGTGGATGTTCAA+GGG - chr7.3:10179227-10179246 MS.gene051363:CDS 50.0%
ATTCAAACTCTTCGGCTGCG+AGG - chr7.3:10177762-10177781 MS.gene051363:CDS 50.0%
ATTGGAACGAATGGCAGGCA+CGG + chr7.3:10178038-10178057 None:intergenic 50.0%
CAAAACCAGCCAGGGTGAAT+GGG + chr7.3:10176897-10176916 None:intergenic 50.0%
CCACAATCACCGCAATGATG+TGG + chr7.3:10178916-10178935 None:intergenic 50.0%
CCACATCATTGCGGTGATTG+TGG - chr7.3:10178913-10178932 MS.gene051363:intron 50.0%
CCCTCCTTCGATGCGTAATT+TGG - chr7.3:10177937-10177956 MS.gene051363:CDS 50.0%
CGGGAGTCAATTGGACACTA+TGG - chr7.3:10179133-10179152 MS.gene051363:CDS 50.0%
CTCTGCCAAAACTACCGCAA+GGG - chr7.3:10178449-10178468 MS.gene051363:intron 50.0%
GATGAATGCTCCCCAGATGA+TGG + chr7.3:10177640-10177659 None:intergenic 50.0%
GCCAAATTACGCATCGAAGG+AGG + chr7.3:10177941-10177960 None:intergenic 50.0%
GCGAAAGGTTTGATATCCGC+AGG - chr7.3:10178606-10178625 MS.gene051363:intron 50.0%
GGAGGAAGAGGAGTTCATGT+GGG - chr7.3:10176576-10176595 MS.gene051363:CDS 50.0%
GGAGGGTTGCGTATTGTTAC+TGG + chr7.3:10177923-10177942 None:intergenic 50.0%
GTGTTGCAGAGACCTTATCC+GGG - chr7.3:10176437-10176456 MS.gene051363:CDS 50.0%
GTGTTGGAAGAACCGGAAGT+AGG - chr7.3:10176404-10176423 MS.gene051363:CDS 50.0%
GTTGGAGACTGTTGTCGCAA+AGG + chr7.3:10177896-10177915 None:intergenic 50.0%
TCAAAACCAGCCAGGGTGAA+TGG + chr7.3:10176898-10176917 None:intergenic 50.0%
TCATGGGAGTTTGCAGAAGC+AGG - chr7.3:10177664-10177683 MS.gene051363:CDS 50.0%
TGAGGCAGATGATGCTGCAA+AGG - chr7.3:10178767-10178786 MS.gene051363:intron 50.0%
TGATGCACCACGATTGTTGG+AGG + chr7.3:10178518-10178537 None:intergenic 50.0%
TGATTGAGACAAGGCAAGCG+AGG + chr7.3:10178793-10178812 None:intergenic 50.0%
TGTCTTCATCGGCCATCCAT+GGG + chr7.3:10176664-10176683 None:intergenic 50.0%
TTAAGCCTAGGATCCAGCCA+TGG + chr7.3:10176179-10176198 None:intergenic 50.0%
TTCTTTCCAGCCTTCCCTTG+CGG + chr7.3:10178466-10178485 None:intergenic 50.0%
TTGTCTTCATCGGCCATCCA+TGG + chr7.3:10176665-10176684 None:intergenic 50.0%
TTTAAGCCTACTCGGTCAGG+TGG - chr7.3:10178352-10178371 MS.gene051363:intron 50.0%
! AGCTGCTGTTGCTGAGGTTT+TGG + chr7.3:10178136-10178155 None:intergenic 50.0%
! GGTGTTGCAGAGACCTTATC+CGG - chr7.3:10176436-10176455 MS.gene051363:CDS 50.0%
!! AGTTGCTGACTCTGTTCCTG+CGG + chr7.3:10178625-10178644 None:intergenic 50.0%
!! GGTTCAGGTGTTGGAAGAAC+CGG - chr7.3:10176397-10176416 MS.gene051363:CDS 50.0%
!! GTTCCTGAAAAGAGCATCGG+CGG - chr7.3:10176328-10176347 MS.gene051363:CDS 50.0%
!!! TGCGGTAGTTTTGGCAGAGT+AGG + chr7.3:10178448-10178467 None:intergenic 50.0%
AAACTACCGCAAGGGAAGGC+TGG - chr7.3:10178457-10178476 MS.gene051363:intron 55.0%
ACAGCAGCTGGGTTCTTCAC+AGG - chr7.3:10178147-10178166 MS.gene051363:intron 55.0%
ACCGCCAATGAGCCTACTTC+CGG + chr7.3:10176419-10176438 None:intergenic 55.0%
ACCGGAAGTAGGCTCATTGG+CGG - chr7.3:10176415-10176434 MS.gene051363:CDS 55.0%
ACTGTCAGGAAAGGGACGAG+TGG - chr7.3:10179216-10179235 MS.gene051363:CDS 55.0%
AGAGAGGCCAGATCGAGCTT+TGG - chr7.3:10176142-10176161 MS.gene051363:intron 55.0%
CCACTCTTCACAGATGGAGC+TGG + chr7.3:10178268-10178287 None:intergenic 55.0%
CCAGCTCCATCTGTGAAGAG+TGG - chr7.3:10178265-10178284 MS.gene051363:intron 55.0%
CGGAGGAAGAGGAGTTCATG+TGG - chr7.3:10176575-10176594 MS.gene051363:CDS 55.0%
CTTGAGCTCAGACCCATGGA+TGG - chr7.3:10176649-10176668 MS.gene051363:intron 55.0%
GAGAGGCCAGATCGAGCTTT+GGG - chr7.3:10176143-10176162 MS.gene051363:intron 55.0%
GATCGCATCACCGTCTCACT+TGG + chr7.3:10178654-10178673 None:intergenic 55.0%
GCCAAAACTACCGCAAGGGA+AGG - chr7.3:10178453-10178472 MS.gene051363:intron 55.0%
GGACGAGTGGATGTTCAAGG+GGG - chr7.3:10179229-10179248 MS.gene051363:CDS 55.0%
GGGACGAGTGGATGTTCAAG+GGG - chr7.3:10179228-10179247 MS.gene051363:CDS 55.0%
GGGTTTAAGCCTACTCGGTC+AGG - chr7.3:10178349-10178368 MS.gene051363:intron 55.0%
TGTGGGATGAGGTGAACCCT+TGG - chr7.3:10176593-10176612 MS.gene051363:intron 55.0%
TTGGAACGAATGGCAGGCAC+GGG + chr7.3:10178037-10178056 None:intergenic 55.0%
! GCCTTCCCTTGCGGTAGTTT+TGG + chr7.3:10178457-10178476 None:intergenic 55.0%
CAAGACCCATTCACCCTGGC+TGG - chr7.3:10176889-10176908 MS.gene051363:CDS 60.0%
CACGTCCATGGCTGGATCCT+AGG - chr7.3:10176171-10176190 MS.gene051363:intron 60.0%
GAACCCAGCTGCTGTTGCTG+AGG + chr7.3:10178142-10178161 None:intergenic 60.0%
GAAGGACCACCTGACCGAGT+AGG + chr7.3:10178361-10178380 None:intergenic 60.0%
GCAGCACCCAAAGCTCGATC+TGG + chr7.3:10176152-10176171 None:intergenic 60.0%
TGGAGAACCTAGTGACGCGG+CGG + chr7.3:10178413-10178432 None:intergenic 60.0%
! CTTTGGGTGCTGCACGTCCA+TGG - chr7.3:10176159-10176178 MS.gene051363:intron 60.0%
! GCTCCGCCGATGCTCTTTTC+AGG + chr7.3:10176334-10176353 None:intergenic 60.0%
!! AAGAGCATCGGCGGAGCCTA+TGG - chr7.3:10176337-10176356 MS.gene051363:CDS 60.0%
GGAGAACCTAGTGACGCGGC+GGG + chr7.3:10178412-10178431 None:intergenic 65.0%
GGCGGAGCCTATGGAGACGA+TGG - chr7.3:10176346-10176365 MS.gene051363:CDS 65.0%
! GGGTGCTGCACGTCCATGGC+TGG - chr7.3:10176163-10176182 MS.gene051363:intron 70.0%
GGGTCTCCCGCCGCGTCACT+AGG - chr7.3:10178403-10178422 MS.gene051363:intron 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 10176080 10179490 10176080 ID=MS.gene051363
chr7.3 mRNA 10176080 10179490 10176080 ID=MS.gene051363.t1;Parent=MS.gene051363
chr7.3 exon 10179365 10179490 10179365 ID=MS.gene051363.t1.exon1;Parent=MS.gene051363.t1
chr7.3 CDS 10179365 10179490 10179365 ID=cds.MS.gene051363.t1;Parent=MS.gene051363.t1
chr7.3 exon 10178952 10179281 10178952 ID=MS.gene051363.t1.exon2;Parent=MS.gene051363.t1
chr7.3 CDS 10178952 10179281 10178952 ID=cds.MS.gene051363.t1;Parent=MS.gene051363.t1
chr7.3 exon 10177041 10178004 10177041 ID=MS.gene051363.t1.exon3;Parent=MS.gene051363.t1
chr7.3 CDS 10177041 10178004 10177041 ID=cds.MS.gene051363.t1;Parent=MS.gene051363.t1
chr7.3 exon 10176710 10176930 10176710 ID=MS.gene051363.t1.exon4;Parent=MS.gene051363.t1
chr7.3 CDS 10176710 10176930 10176710 ID=cds.MS.gene051363.t1;Parent=MS.gene051363.t1
chr7.3 exon 10176212 10176610 10176212 ID=MS.gene051363.t1.exon5;Parent=MS.gene051363.t1
chr7.3 CDS 10176212 10176610 10176212 ID=cds.MS.gene051363.t1;Parent=MS.gene051363.t1
chr7.3 exon 10176080 10176091 10176080 ID=MS.gene051363.t1.exon6;Parent=MS.gene051363.t1
chr7.3 CDS 10176080 10176091 10176080 ID=cds.MS.gene051363.t1;Parent=MS.gene051363.t1
Gene Sequence

>MS.gene051363

ATGCAGACTAAAGGAGTATTTGATGATATGGCTGGAGTTATTTCAAATGCAAATGAAGACGCAGAGAGGCCAGATCGAGCTTTGGGTGCTGCACGTCCATGGCTGGATCCTAGGCTTAACATGCATGTATGTGAAGTGTTTTTTCTTTTCCTCTTTATACTATTCAATCTGTTAGTTATCATATTTTAATAGAATGGTGTATATTACAGAATAATCAGCATACTCATAGAGGTGCACTTAATGACTCTGTTCCTGAAAAGAGCATCGGCGGAGCCTATGGAGACGATGGATATAATTCTAGTGTTTCAAATAGTTTGGGTTCAGGTGTTGGAAGAACCGGAAGTAGGCTCATTGGCGGTGTTGCAGAGACCTTATCCGGGCAAAGAAATGGTTTCAGCCTCAAACATAGTTTTTCAAATCATGAAGCACCGAAGTCTGTGAATTTGGATGCACATAGCATAAGGAGCAGTGCAATGTCAAAGAACTGGAAAAATTCGGAGGAAGAGGAGTTCATGTGGGATGAGGTGAACCCTTGGTTTGTCTGATAATGTACCTAATGTCTCTAACAACTTGAGCTCAGACCCATGGATGGCCGATGAAGACAATTTGGTAAGCTTGCTACAATAAAGGGTCAATTCTACTTTGCTACCCAATTTGTTTGTCCAATTCAGTTTTTTCCCAATTATGAAATGAGGTGCTTTCCAATTTGATCTACCTTGTTTTGTTTTTGGAATGTGTCCCTTGTCCTTCAAGTTAGAAATTTACAAATTTGAGAAGCATCCTGCAAGTAATTTTATGGCAATAATAATCAAGACCCATTCACCCTGGCTGGTTTTGATAAAAATGCTGCACAAGAAATTGACTTGTCGCTTTTGGCACAGTTAGAACATCATTTAGAATCTGTTTCCTGTCTTGAAAATTCATTTGTGTGTGAGTTCCGATTAATTGGAAGAATCAATCCCCAACTTGAAATATGATGACATCGTAGTAAAGCAAACTAAAGAAGAGGGTAACATGACAAAATGCTTGATCGGAAAGTAAATGTCTATCACAATAGGGTGGGAAAGGATAATTGGCAGCAACAAAATTTTTGTATCAGGTTGAAGTAAAGACAGAACTGTGACCAAGGAATGATGCATAGAAACGAAAGAAATTGCCAATCACATCTATGCATGACTCTTTCCGTGGGATAATAAATATGCCTAATTTTGTTGACTTAAAAAAATACTAATTTAAATTCTAAATATCCTAATAAACCTAAGACATAATTTCCTAATTTAACTTGGCATAAGATACCCCAGGACTCTACAATTACACCAATTAATGAAATTACTAATAATTAATAAACCTGTAACTAAATCATAATTATCAAATAGTATAGTCGTATAGATGCATTGTAAATTGATGCAATGATATTTTAATATTACATATATATTTCATCTAATCTTCGTGACCAATTTTGTTTTTTGCATGCAGGAAAGTGAAGATCACCTCCAAATCACACACCCAATTGGAACAAAGGTTAATAAAGGAATATCCACTGTTAAGAAACAACTACCATCATCTGGGGAGCATTCATCATTATCATGGGAGTTTGCAGAAGCAGGTCCCAAGTGCCAAATTGAATATGAAGCCAGGTCACTCAGAAATATTTGTTTCTGCTCCTAATGGCTTACCCAAGCATTCAAACTCTTCGGCTGCGAGGATAAGAAATCAGTCTTCTATGCCGCATACAACAATAGGAATGTCCAAAATTACGGGACAGCAGCAATTTGATTCTGAGGGGACAGAGTCCCCTTCAGAACAGTCTTCACCTTTGCGACAACAGTCTCCAACAGTGCCAGTAACAATACGCAACCCTCCTTCGATGCGTAATTTGGCTGAGCAAGATTGTCCAACATCTCTTAAAACATCTCAACATTTGGGTGGTCTGCAAAGACAATATATTAGAGATCCCGTGCCTGCCATTCGTTCCAATGTTCAGGTTGGTAACTTGCGAAAATCACAAGAGAAGGATATGCGGGGTCCGTTATCTTTAGCAACTTCTTTTCAGCCAAAACCTCAGCAACAGCAGCTGGGTTCTTCACAGGCTGAAGTTACTCTTAAAGCTAAGCAGCCACTCAAATCTAAAGCTCCTTTAGTCAAAGCCAAAGTGACTTCAGAAAAGTCAACTACAAAGTGTCTTCCAGCTCCATCTGTGAAGAGTGGAATCATTCCCAATAAATCAATTACGAGAAGTCTGGATGCAAGTAACTGTCCATCTCAAATAGGGTTTAAGCCTACTCGGTCAGGTGGTCCTTCCCCGACCACATTAATTTCTTCGGGGTCTCCCGCCGCGTCACTAGGTTCTCCAAATGATTATTCACCTACTCTGCCAAAACTACCGCAAGGGAAGGCTGGAAAGAAGCAAAAGGATTCTACTCAACCATCTACTTCCTCCAACAATCGTGGTGCATCAGCTCCGAGCTCAAATACCGCCAATAAGAATACCTTGAATCCAATTTCAAATCTTTAAGCTCGTTAGTTGCGAAAGGTTTGATATCCGCAGGAACAGAGTCAGCAACTACAGTGCCAAGTGAGACGGTGATGCGATCGAAAGACCAAACTGAAAGCATTGCTGTCAGTTCCTCTTTACCAGTTGCTTCAGTTCCTGTTTCTTCAGCTGTCCCAGTAAAATCTTCCAGAATTGAGGCAGATGATGCTGCAAAGGCCTCGCTTGCCTTGTCTCAATCAACTAGCACAGAAATTAGAAATCTCATTGGCTTTGATTTCAAACCTGATGTCATTCGAGAAATCGCACCCACATGTAATCGAAGAATTATTGGATGAACTCCCACATCATTGCGGTGATTGTGGTATTAGGCTTAAACAACAAGACAGTTTAATAGACACTTGGAATGGCATGCTACAAAAGAAAGAGAACAAAATGGTCTGATTGTAGCATCAAGAAGATGGTATGCAACATCAGATGACTGGATTGCTGGCAAGGCAGAATGTCTGTCTGAGTCTGAGTTTACTGATTCTGTAGATGAATATGATGATAATAAAACAGACGGGAGTCAATTGGACACTATGGTTGTAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTATACTGTCAGGAAAGGGACGAGTGGATGTTCAAGGGGGCTGTATACCTGAACAATCCAGATAGCGAGATGGAAAGTAGAAATGTGGGGCCCATCATTCATGCTAGATGCTTGTCAGATAACTCAATACTTGGTGTGACTAATACAGTAAGACTCATAGTTAATTGAATGGATGTCTTCTAGTTGTTTTTAAAGCTTCAATTAGTCTATTTGAATTTTGAAGGAGTGTTCAAATTTTTGTACTGATTGGACCTGCTCTTTATGCAGGAACATGATTGA

Protein sequence

>MS.gene051363.t1

MQTKGVFDDMAGVISNANEDAERPDRALGAARPWLDPRLNMHNNQHTHRGALNDSVPEKSIGGAYGDDGYNSSVSNSLGSGVGRTGSRLIGGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHSIRSSAMSKNWKNSEEEEFMWDEVNPWFITSKSHTQLEQRLIKEYPLLRNNYHHLGSIHHYHGSLQKQVPSAKLNMKPGHSEIFVSAPNGLPKHSNSSAARIRNQSSMPHTTIGMSKITGQQQFDSEGTESPSEQSSPLRQQSPTVPVTIRNPPSMRNLAEQDCPTSLKTSQHLGGLQRQYIRDPVPAIRSNVQVGNLRKSQEKDMRGPLSLATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCLPAPSVKSGIIPNKSITRSLDASNCPSQIGFKPTRSGGPSPTTLISSGSPAASLGSPNDYSPTLPKLPQGKAGKKQKDSTQPSTSSNNRATTVPSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEADDAAKASLALSQSTSTEIRNLIGFDFKPDFNRHLEWHATKEREQNGLIVASRRWYATSDDWIAGKAECLSESEFTDSVDEYDDNKTDGSQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGAVYLNNPDSEMESRNVGPIIHARCLSDNSILGVTNTEHD