Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78812.t1 | XP_013455028.2 | 98.7 | 445 | 5 | 1 | 1 | 445 | 1 | 444 | 2.10E-216 | 761.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78812.t1 | Q94B55 | 57.2 | 444 | 171 | 4 | 17 | 445 | 10 | 449 | 3.8e-113 | 409.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78812.t1 | A0A396I2X5 | 98.7 | 445 | 5 | 1 | 1 | 445 | 1 | 444 | 1.5e-216 | 761.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene78812 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene78812 | 0.81977 | 9.75E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene78812 | 0.828694 | 7.80E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene78812 | 0.840183 | 1.01E-57 | -1.69E-46 |
| MS.gene054057 | MS.gene78812 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene055117 | MS.gene78812 | 0.806561 | 7.75E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene78812 | 0.801997 | 6.91E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene78812 | -0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene060929 | MS.gene78812 | 0.80543 | 1.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78812.t1 | MTR_4g021880 | 98.652 | 445 | 5 | 1 | 1 | 445 | 80 | 523 | 0.0 | 901 |
| MS.gene78812.t1 | MTR_4g021880 | 98.142 | 323 | 5 | 1 | 1 | 323 | 80 | 401 | 0.0 | 645 |
| MS.gene78812.t1 | MTR_2g096760 | 60.455 | 440 | 162 | 8 | 11 | 443 | 4 | 438 | 0.0 | 526 |
| MS.gene78812.t1 | MTR_4g063830 | 59.956 | 452 | 162 | 7 | 1 | 445 | 1 | 440 | 0.0 | 515 |
| MS.gene78812.t1 | MTR_0020s0130 | 27.126 | 435 | 251 | 10 | 23 | 421 | 14 | 418 | 1.17e-34 | 135 |
| MS.gene78812.t1 | MTR_4g129470 | 27.897 | 466 | 246 | 13 | 23 | 434 | 20 | 449 | 8.14e-34 | 133 |
| MS.gene78812.t1 | MTR_1g100797 | 28.771 | 358 | 198 | 9 | 56 | 385 | 47 | 375 | 1.27e-32 | 129 |
| MS.gene78812.t1 | MTR_4g129470 | 27.820 | 399 | 194 | 12 | 92 | 434 | 1 | 361 | 4.40e-22 | 98.2 |
| MS.gene78812.t1 | MTR_1g100797 | 27.946 | 297 | 157 | 9 | 117 | 385 | 4 | 271 | 9.22e-21 | 94.4 |
| MS.gene78812.t1 | MTR_6g027840 | 31.250 | 192 | 114 | 5 | 58 | 248 | 181 | 355 | 7.52e-14 | 73.9 |
| MS.gene78812.t1 | MTR_6g027840 | 27.442 | 215 | 108 | 3 | 57 | 228 | 246 | 455 | 3.73e-11 | 65.5 |
| MS.gene78812.t1 | MTR_7g115280 | 27.206 | 272 | 165 | 7 | 23 | 267 | 18 | 283 | 8.69e-14 | 73.6 |
| MS.gene78812.t1 | MTR_7g100390 | 27.848 | 237 | 145 | 9 | 14 | 243 | 44 | 261 | 6.91e-12 | 67.8 |
| MS.gene78812.t1 | MTR_5g026800 | 30.539 | 167 | 94 | 6 | 58 | 223 | 15 | 160 | 1.14e-11 | 65.5 |
| MS.gene78812.t1 | MTR_1g089180 | 25.893 | 224 | 149 | 6 | 22 | 234 | 220 | 437 | 3.18e-11 | 65.5 |
| MS.gene78812.t1 | MTR_1g115575 | 26.214 | 206 | 136 | 5 | 19 | 223 | 132 | 322 | 4.59e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78812.t1 | AT2G28840 | 59.565 | 460 | 160 | 7 | 1 | 445 | 1 | 449 | 0.0 | 519 |
| MS.gene78812.t1 | AT2G28840 | 64.249 | 386 | 120 | 5 | 75 | 445 | 53 | 435 | 1.74e-169 | 483 |
| MS.gene78812.t1 | AT5G07270 | 28.465 | 404 | 218 | 9 | 56 | 418 | 47 | 420 | 2.23e-33 | 132 |
| MS.gene78812.t1 | AT5G57740 | 26.357 | 387 | 233 | 8 | 23 | 385 | 20 | 378 | 1.72e-27 | 115 |
| MS.gene78812.t1 | AT3G04710 | 26.415 | 265 | 162 | 6 | 25 | 262 | 244 | 502 | 1.42e-13 | 73.2 |
| MS.gene78812.t1 | AT3G04710 | 26.415 | 265 | 162 | 6 | 25 | 262 | 20 | 278 | 2.40e-13 | 72.0 |
| MS.gene78812.t1 | AT3G12360 | 27.619 | 210 | 130 | 7 | 19 | 224 | 118 | 309 | 5.62e-13 | 71.2 |
| MS.gene78812.t1 | AT3G12360 | 27.619 | 210 | 130 | 7 | 19 | 224 | 130 | 321 | 5.66e-13 | 71.2 |
| MS.gene78812.t1 | AT5G60070 | 27.734 | 256 | 162 | 6 | 17 | 262 | 30 | 272 | 4.70e-12 | 68.6 |
| MS.gene78812.t1 | AT1G07710 | 28.636 | 220 | 127 | 10 | 13 | 224 | 61 | 258 | 9.37e-12 | 67.4 |
| MS.gene78812.t1 | AT1G07710 | 28.636 | 220 | 127 | 10 | 13 | 224 | 61 | 258 | 9.37e-12 | 67.4 |
| MS.gene78812.t1 | AT5G20350 | 26.275 | 255 | 167 | 7 | 3 | 255 | 17 | 252 | 1.08e-11 | 67.4 |
Find 117 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAGACACACACCTGTTTA+TGG | 0.203955 | 4.2:-80694666 | None:intergenic |
| GTATGTCATTATCCTTTAAT+AGG | 0.211743 | 4.2:-80696340 | None:intergenic |
| CTTCACCTGTTGCAGATTCT+TGG | 0.226383 | 4.2:+80695154 | MS.gene78812:CDS |
| TCAAGAAGCCAAGGCCTTAT+TGG | 0.227680 | 4.2:+80696277 | MS.gene78812:CDS |
| CAAGAGCCCCGTTGTCTAAT+AGG | 0.267984 | 4.2:-80695367 | None:intergenic |
| TTGCACTATGCTGCTTATTA+TGG | 0.284145 | 4.2:+80695090 | MS.gene78812:CDS |
| TGAGGATGATGTTGGTGTTT+TGG | 0.299141 | 4.2:+80693303 | MS.gene78812:CDS |
| TGGCCATGTAGATTCATTAA+AGG | 0.303923 | 4.2:+80695110 | MS.gene78812:CDS |
| TGTCCGGATGCTGCTTGCTT+GGG | 0.304175 | 4.2:+80695559 | MS.gene78812:CDS |
| CATCAGCCGCACCTCTTGTT+TGG | 0.313334 | 4.2:+80696222 | MS.gene78812:CDS |
| AGGATCGCTAGTCGCAATTC+AGG | 0.319801 | 4.2:+80696853 | MS.gene78812:CDS |
| GAGAGAAAAGGCCCTATTAA+AGG | 0.346636 | 4.2:+80696328 | MS.gene78812:CDS |
| CCGGTGGTGCAACCGGTTGC+AGG | 0.348073 | 4.2:-80696655 | None:intergenic |
| TTTGCTTCTGCTGTTGTGAA+TGG | 0.354727 | 4.2:+80693253 | MS.gene78812:CDS |
| AGGATGGCACCTCGACAAAA+TGG | 0.371108 | 4.2:-80696688 | None:intergenic |
| ACGCCTTACTAGAAGCTAAC+AGG | 0.373800 | 4.2:+80696303 | MS.gene78812:CDS |
| GTGCAACCGGTTGCAGGATC+AGG | 0.376909 | 4.2:-80696649 | None:intergenic |
| AGGACATTATGCAGATTTCC+TGG | 0.380514 | 4.2:+80695491 | MS.gene78812:intron |
| AACTGGTCCGGTGGTGCAAC+CGG | 0.382400 | 4.2:-80696662 | None:intergenic |
| GTGTCCGGATGCTGCTTGCT+TGG | 0.389067 | 4.2:+80695558 | MS.gene78812:CDS |
| TGTGCTTCAACCGGTGGATA+CGG | 0.393674 | 4.2:+80695392 | MS.gene78812:CDS |
| TTCATTTCCTATTAGACAAC+GGG | 0.394782 | 4.2:+80695360 | MS.gene78812:CDS |
| AGACATCGACTTTGACATTC+CGG | 0.396524 | 4.2:-80694636 | None:intergenic |
| TCTTCTATAGGAAAGCAATA+TGG | 0.397725 | 4.2:+80696522 | MS.gene78812:intron |
| TATGTCATTATCCTTTAATA+GGG | 0.402831 | 4.2:-80696339 | None:intergenic |
| ATATGTAGCGGTGTTCTTCC+AGG | 0.406530 | 4.2:-80695509 | None:intergenic |
| GATGGAAATTGTTGAAAGTA+TGG | 0.408192 | 4.2:+80693279 | MS.gene78812:CDS |
| GCTCTTGTTTGTGCTTCAAC+CGG | 0.413267 | 4.2:+80695383 | MS.gene78812:CDS |
| CCTGCAACCGGTTGCACCAC+CGG | 0.414382 | 4.2:+80696655 | MS.gene78812:CDS |
| TTGTCAGCCATTGGCTCATT+CGG | 0.419213 | 4.2:+80696829 | MS.gene78812:CDS |
| TGCATCACAGCCAACATTAA+CGG | 0.430406 | 4.2:-80694823 | None:intergenic |
| CTCCCCAAGCAAGCAGCATC+CGG | 0.432906 | 4.2:-80695562 | None:intergenic |
| TGTCTTGAATCGCCATAAAC+AGG | 0.438427 | 4.2:+80694654 | MS.gene78812:CDS |
| TCTTGGCAACATTTAATTGA+AGG | 0.438454 | 4.2:-80696708 | None:intergenic |
| TGCTTTCGATGTTGTTGGAC+CGG | 0.439129 | 4.2:+80694617 | MS.gene78812:CDS |
| TTAGGTGCTTTCGATGTTGT+TGG | 0.446176 | 4.2:+80694612 | MS.gene78812:intron |
| AGGCTTCAATTAGATTCCTC+CGG | 0.459384 | 4.2:+80695590 | MS.gene78812:CDS |
| TTCAAGAGTTTGTCAGCCAT+TGG | 0.462380 | 4.2:+80696820 | MS.gene78812:CDS |
| ATCACTATCAGTCTTGATCT+TGG | 0.466006 | 4.2:-80696725 | None:intergenic |
| CTGATGAACTTTAGCGGAGA+TGG | 0.469218 | 4.2:-80696245 | None:intergenic |
| AAGAAGCCTGATCCTGCAAC+CGG | 0.473327 | 4.2:+80696643 | MS.gene78812:CDS |
| CCTCGACAAAATGGACAAAC+TGG | 0.484711 | 4.2:-80696679 | None:intergenic |
| CTTCATTTAGCAGCTGCAAA+TGG | 0.485458 | 4.2:+80693358 | MS.gene78812:CDS |
| TGACCTCAATTGTGCACACT+TGG | 0.486372 | 4.2:-80696567 | None:intergenic |
| CTCCCTGTTAGCTTCTAGTA+AGG | 0.494532 | 4.2:-80696306 | None:intergenic |
| GTGCTTCAACCGGTGGATAC+GGG | 0.495609 | 4.2:+80695393 | MS.gene78812:CDS |
| TGCTTGCTTGGGGAGCAGAT+AGG | 0.501868 | 4.2:+80695570 | MS.gene78812:CDS |
| TGGAAGAACACCGCTACATA+TGG | 0.502557 | 4.2:+80695511 | MS.gene78812:CDS |
| GCTGTGATGCATGGAAAGAC+TGG | 0.505325 | 4.2:+80694835 | MS.gene78812:CDS |
| AGCTCGCTGATGAACTTTAG+CGG | 0.516523 | 4.2:-80696251 | None:intergenic |
| CTTGTTTGTGCTTCAACCGG+TGG | 0.520146 | 4.2:+80695386 | MS.gene78812:CDS |
| CGACCAAGTGTGCACAATTG+AGG | 0.520454 | 4.2:+80696564 | MS.gene78812:CDS |
| ACTAACCAAGAATCTGCAAC+AGG | 0.521723 | 4.2:-80695159 | None:intergenic |
| TTCTTAAGAGCAACTGTGAA+CGG | 0.522067 | 4.2:-80696164 | None:intergenic |
| GTGGTTCTGTGGACTGTGTC+CGG | 0.525522 | 4.2:+80695543 | MS.gene78812:CDS |
| GGCTTCAATTAGATTCCTCC+GGG | 0.526424 | 4.2:+80695591 | MS.gene78812:CDS |
| CGCCTTACTAGAAGCTAACA+GGG | 0.528470 | 4.2:+80696304 | MS.gene78812:CDS |
| AACAAGAGGTGCGGCTGATG+AGG | 0.531096 | 4.2:-80696219 | None:intergenic |
| AGCTAACAGGGAGAGAGAAA+AGG | 0.531496 | 4.2:+80696316 | MS.gene78812:CDS |
| GGCAACATTTAATTGAAGGA+TGG | 0.535795 | 4.2:-80696704 | None:intergenic |
| AGAAAATCAAATTTCAGCGA+AGG | 0.537043 | 4.2:+80696787 | MS.gene78812:CDS |
| CGGCTGATGAGGGATCGAGC+AGG | 0.540258 | 4.2:-80696208 | None:intergenic |
| TCTTGAGGCAGCATAGTGCT+AGG | 0.541497 | 4.2:-80696624 | None:intergenic |
| TTGCAGGATCAGGCTTCTTG+AGG | 0.542464 | 4.2:-80696639 | None:intergenic |
| GAAAATCAAATTTCAGCGAA+GGG | 0.543834 | 4.2:+80696788 | MS.gene78812:CDS |
| TGCTGTTGTGAATGGTGAGA+TGG | 0.545702 | 4.2:+80693261 | MS.gene78812:CDS |
| CAGCCATTGGCTCATTCGGA+AGG | 0.547162 | 4.2:+80696833 | MS.gene78812:CDS |
| GGCGGCTCGTGGTGGTTCTG+TGG | 0.548964 | 4.2:+80695532 | MS.gene78812:CDS |
| ACAAGAGGTGCGGCTGATGA+GGG | 0.550454 | 4.2:-80696218 | None:intergenic |
| ACAAAATGGACAAACTGGTC+CGG | 0.555387 | 4.2:-80696674 | None:intergenic |
| ATGGAAAAGCTTATTCAAGC+TGG | 0.555583 | 4.2:+80694862 | MS.gene78812:CDS |
| GTCCGGATGCTGCTTGCTTG+GGG | 0.558568 | 4.2:+80695560 | MS.gene78812:CDS |
| AGCAGCAAGGTGCAGCGGCG+TGG | 0.564799 | 4.2:-80695315 | None:intergenic |
| AATCAATCGAGTTGTGTGGT+GGG | 0.566878 | 4.2:+80693196 | MS.gene78812:CDS |
| CTACATATGGCGGCTCGTGG+TGG | 0.570162 | 4.2:+80695524 | MS.gene78812:CDS |
| GTGAACATAAGAGATGGAAA+TGG | 0.571705 | 4.2:+80695290 | MS.gene78812:CDS |
| TCAGAACGTAGTGGAGATGA+AGG | 0.572443 | 4.2:-80696362 | None:intergenic |
| TCTCTAGACACCGTTAATGT+TGG | 0.577223 | 4.2:+80694813 | MS.gene78812:intron |
| CAAGTATGATGATATTGTCT+CGG | 0.577587 | 4.2:+80696388 | MS.gene78812:CDS |
| CGCTAGTCGCAATTCAGGAA+AGG | 0.581409 | 4.2:+80696858 | MS.gene78812:CDS |
| CGTTGTCTAATAGGAAATGA+AGG | 0.581668 | 4.2:-80695358 | None:intergenic |
| GAATCAATCGAGTTGTGTGG+TGG | 0.581898 | 4.2:+80693195 | MS.gene78812:CDS |
| GCATGGAAAGACTGGTTGCA+TGG | 0.582253 | 4.2:+80694843 | MS.gene78812:CDS |
| TTTGCAGCTGCTAAATGAAG+AGG | 0.582421 | 4.2:-80693355 | None:intergenic |
| ATCAATCGAGTTGTGTGGTG+GGG | 0.584222 | 4.2:+80693197 | MS.gene78812:CDS |
| ACCTTGCTGCTCGTCATAGA+CGG | 0.587192 | 4.2:+80695327 | MS.gene78812:CDS |
| AATTGTTGAAAGTATGGTTG+AGG | 0.587911 | 4.2:+80693285 | MS.gene78812:CDS |
| ATTTAGCAGCTGCAAATGGT+CGG | 0.589147 | 4.2:+80693362 | MS.gene78812:CDS |
| CGATTATTACCCGTATCCAC+CGG | 0.590839 | 4.2:-80695402 | None:intergenic |
| CTTCATTTCCTATTAGACAA+CGG | 0.594191 | 4.2:+80695359 | MS.gene78812:CDS |
| GGCTGATGAGGGATCGAGCA+GGG | 0.598983 | 4.2:-80696207 | None:intergenic |
| CTTGAGGCAGCATAGTGCTA+GGG | 0.599231 | 4.2:-80696623 | None:intergenic |
| TTGATGCCGAAAAGCAATGA+GGG | 0.600242 | 4.2:+80696881 | MS.gene78812:CDS |
| CGAGCTCAATCAAGAAGCCA+AGG | 0.607931 | 4.2:+80696268 | MS.gene78812:CDS |
| TTAATGTTGGCTGTGATGCA+TGG | 0.609200 | 4.2:+80694826 | MS.gene78812:CDS |
| TGACGAGCAGCAAGGTGCAG+CGG | 0.609387 | 4.2:-80695320 | None:intergenic |
| AGATTTGTGAACATAAGAGA+TGG | 0.609907 | 4.2:+80695284 | MS.gene78812:CDS |
| AGCGGAGATGGCCAAACAAG+AGG | 0.611353 | 4.2:-80696233 | None:intergenic |
| TCAATCGAGTTGTGTGGTGG+GGG | 0.613318 | 4.2:+80693198 | MS.gene78812:CDS |
| GATCCTTCCGAATGAGCCAA+TGG | 0.614518 | 4.2:-80696836 | None:intergenic |
| CCAGTCCAACAAAACCAAGA+AGG | 0.616065 | 4.2:+80696761 | MS.gene78812:CDS |
| CCGCTACATATGGCGGCTCG+TGG | 0.616354 | 4.2:+80695521 | MS.gene78812:CDS |
| TGATATTGTCTCGGATTCTG+AGG | 0.617221 | 4.2:+80696397 | MS.gene78812:CDS |
| GCACACATTTGATGATCACA+AGG | 0.625070 | 4.2:-80696592 | None:intergenic |
| ATAAGCAGCATAGTGCAAGC+AGG | 0.631181 | 4.2:-80695085 | None:intergenic |
| AGTATGGTTGAGGATGATGT+TGG | 0.632674 | 4.2:+80693295 | MS.gene78812:CDS |
| AGATGGCCAAACAAGAGGTG+CGG | 0.640644 | 4.2:-80696228 | None:intergenic |
| AGCTGCAAATGGTCGGATCG+AGG | 0.641596 | 4.2:+80693369 | MS.gene78812:CDS |
| TAGCCTTTAATGAATCTACA+TGG | 0.650370 | 4.2:-80695113 | None:intergenic |
| GTTGATGCCGAAAAGCAATG+AGG | 0.652343 | 4.2:+80696880 | MS.gene78812:CDS |
| AAGAACACCGCTACATATGG+CGG | 0.654317 | 4.2:+80695514 | MS.gene78812:CDS |
| AAATGGACAAACTGGTCCGG+TGG | 0.658035 | 4.2:-80696671 | None:intergenic |
| CCACGAGCCGCCATATGTAG+CGG | 0.686938 | 4.2:-80695521 | None:intergenic |
| GCCGTCTATGACGAGCAGCA+AGG | 0.687428 | 4.2:-80695328 | None:intergenic |
| TACTTGCTATCAGAACGTAG+TGG | 0.708760 | 4.2:-80696371 | None:intergenic |
| TCAGAATCAATCGAGTTGTG+TGG | 0.722101 | 4.2:+80693192 | MS.gene78812:CDS |
| TCATTTCCTATTAGACAACG+GGG | 0.749569 | 4.2:+80695361 | MS.gene78812:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTTAATTTTAAA+TGG | + | chr4.2:80695760-80695779 | MS.gene78812:intron | 0.0% |
| !! | AAATTATATCATAAAAAACT+AGG | + | chr4.2:80695693-80695712 | MS.gene78812:intron | 10.0% |
| !!! | ATTTTTTCTAAAATCTATTT+TGG | - | chr4.2:80694132-80694151 | None:intergenic | 10.0% |
| !!! | TTTTTGAAAAAATTACATTT+TGG | + | chr4.2:80694008-80694027 | MS.gene78812:intron | 10.0% |
| !! | TAGTCAAACTATAATTTAAA+AGG | - | chr4.2:80696005-80696024 | None:intergenic | 15.0% |
| !!! | ACTTCTAAATAATAGTTTTA+TGG | - | chr4.2:80694422-80694441 | None:intergenic | 15.0% |
| !! | AAGTTAAAATCATCCAAAAA+TGG | - | chr4.2:80693853-80693872 | None:intergenic | 20.0% |
| !! | AATCATAGATTCTAAATCAA+TGG | + | chr4.2:80695660-80695679 | MS.gene78812:intron | 20.0% |
| !! | ATTATAAGTTACTTATTTGC+TGG | + | chr4.2:80696494-80696513 | MS.gene78812:intron | 20.0% |
| !! | TATATCATAAAAAACTAGGA+AGG | + | chr4.2:80695697-80695716 | MS.gene78812:intron | 20.0% |
| !! | TATGATATAATTTACACATG+TGG | - | chr4.2:80695686-80695705 | None:intergenic | 20.0% |
| !! | TATGTCATTATCCTTTAATA+GGG | - | chr4.2:80696342-80696361 | None:intergenic | 20.0% |
| !! | TGATTAAAATTGAGTTTGAA+AGG | - | chr4.2:80694309-80694328 | None:intergenic | 20.0% |
| !! | TGTAAATAAATATTCTTTGC+AGG | + | chr4.2:80696135-80696154 | MS.gene78812:intron | 20.0% |
| !! | TGTTAATCTTAGATGAAAAT+TGG | + | chr4.2:80695437-80695456 | MS.gene78812:intron | 20.0% |
| !! | TTTATGACTATATTTGGATT+AGG | + | chr4.2:80693688-80693707 | MS.gene78812:intron | 20.0% |
| !!! | ACAAGAGTTAAATTTTACTA+AGG | - | chr4.2:80696116-80696135 | None:intergenic | 20.0% |
| !!! | AGATGTTTTTTTTGCTTTAA+AGG | + | chr4.2:80694154-80694173 | MS.gene78812:intron | 20.0% |
| !!! | ATAATTTGCTTTTATAATGC+CGG | - | chr4.2:80695738-80695757 | None:intergenic | 20.0% |
| !!! | GAACTTTTTATGACTATATT+TGG | + | chr4.2:80693682-80693701 | MS.gene78812:intron | 20.0% |
| !!! | GTTGAAAAGTTTATTTTTAG+TGG | + | chr4.2:80693888-80693907 | MS.gene78812:intron | 20.0% |
| !!! | TCATATTAAACGCATTTTAA+GGG | + | chr4.2:80694927-80694946 | MS.gene78812:intron | 20.0% |
| !!! | TTGAAAAAATTACATTTTGG+AGG | + | chr4.2:80694011-80694030 | MS.gene78812:intron | 20.0% |
| !!! | TTTTAAGGGTAAAATTTAGT+TGG | + | chr4.2:80694941-80694960 | MS.gene78812:intron | 20.0% |
| ! | AAGTATGAAATACCAAATAG+AGG | - | chr4.2:80695912-80695931 | None:intergenic | 25.0% |
| ! | ATCCATGTATTGAATTTAAG+AGG | + | chr4.2:80693779-80693798 | MS.gene78812:intron | 25.0% |
| ! | CCAATTATCCAAAAAATCAA+AGG | - | chr4.2:80696434-80696453 | None:intergenic | 25.0% |
| ! | GTATGTCATTATCCTTTAAT+AGG | - | chr4.2:80696343-80696362 | None:intergenic | 25.0% |
| ! | TAAATGTATCTTTGGATTGA+AGG | + | chr4.2:80693969-80693988 | MS.gene78812:intron | 25.0% |
| ! | TAGAGACTCAAAAAGAAAAA+GGG | - | chr4.2:80694799-80694818 | None:intergenic | 25.0% |
| ! | TTCCTCTTAAATTCAATACA+TGG | - | chr4.2:80693784-80693803 | None:intergenic | 25.0% |
| !! | CTCATATTAAACGCATTTTA+AGG | + | chr4.2:80694926-80694945 | MS.gene78812:intron | 25.0% |
| !!! | CCTTTGATTTTTTGGATAAT+TGG | + | chr4.2:80696431-80696450 | MS.gene78812:intron | 25.0% |
| AAGGTTTCATGATTAATTGC+CGG | + | chr4.2:80695716-80695735 | MS.gene78812:intron | 30.0% | |
| AGAAAATCAAATTTCAGCGA+AGG | + | chr4.2:80696787-80696806 | MS.gene78812:CDS | 30.0% | |
| AGATTTGTGAACATAAGAGA+TGG | + | chr4.2:80695284-80695303 | MS.gene78812:CDS | 30.0% | |
| AGTATATATGTGTTAGTGTC+TGG | + | chr4.2:80693603-80693622 | MS.gene78812:intron | 30.0% | |
| ATTGATGAGTTTATTCAGAG+TGG | + | chr4.2:80693943-80693962 | MS.gene78812:intron | 30.0% | |
| CAAGTATGATGATATTGTCT+CGG | + | chr4.2:80696388-80696407 | MS.gene78812:CDS | 30.0% | |
| CTAGAGACTCAAAAAGAAAA+AGG | - | chr4.2:80694800-80694819 | None:intergenic | 30.0% | |
| CTTCATTTCCTATTAGACAA+CGG | + | chr4.2:80695359-80695378 | MS.gene78812:CDS | 30.0% | |
| GAAAATCAAATTTCAGCGAA+GGG | + | chr4.2:80696788-80696807 | MS.gene78812:CDS | 30.0% | |
| GAAACATATGTTTACTTACC+CGG | - | chr4.2:80695612-80695631 | None:intergenic | 30.0% | |
| GATGGAAATTGTTGAAAGTA+TGG | + | chr4.2:80693279-80693298 | MS.gene78812:CDS | 30.0% | |
| GTCAAAATCATTGAACGATT+TGG | - | chr4.2:80695252-80695271 | None:intergenic | 30.0% | |
| TACTTCTTTGAACCTCTATT+TGG | + | chr4.2:80695897-80695916 | MS.gene78812:intron | 30.0% | |
| TAGCCTTTAATGAATCTACA+TGG | - | chr4.2:80695116-80695135 | None:intergenic | 30.0% | |
| TCTTCATTAAGACTGATCAA+AGG | + | chr4.2:80695471-80695490 | MS.gene78812:intron | 30.0% | |
| TCTTCTATAGGAAAGCAATA+TGG | + | chr4.2:80696522-80696541 | MS.gene78812:intron | 30.0% | |
| TCTTGGCAACATTTAATTGA+AGG | - | chr4.2:80696711-80696730 | None:intergenic | 30.0% | |
| TGAGAACATACAAATACGAA+TGG | + | chr4.2:80695218-80695237 | MS.gene78812:intron | 30.0% | |
| TTCATTTCCTATTAGACAAC+GGG | + | chr4.2:80695360-80695379 | MS.gene78812:CDS | 30.0% | |
| TTTCTTGTATCGAACAAACT+TGG | + | chr4.2:80694748-80694767 | MS.gene78812:intron | 30.0% | |
| ! | AATTGTTGAAAGTATGGTTG+AGG | + | chr4.2:80693285-80693304 | MS.gene78812:CDS | 30.0% |
| ! | AGAAAGTGCAGAAATTACAA+AGG | - | chr4.2:80694733-80694752 | None:intergenic | 30.0% |
| ! | GAGTTGACTAAAGCTAATTT+TGG | + | chr4.2:80693827-80693846 | MS.gene78812:intron | 30.0% |
| ! | TGAATTGATTAGCTGAAAAC+AGG | + | chr4.2:80695947-80695966 | MS.gene78812:intron | 30.0% |
| !! | AAGCTAATTTTGGCCATTTT+TGG | + | chr4.2:80693837-80693856 | MS.gene78812:intron | 30.0% |
| !! | AATCGTTCAATGATTTTGAC+AGG | + | chr4.2:80695252-80695271 | MS.gene78812:intron | 30.0% |
| !! | ATCGTTCAATGATTTTGACA+GGG | + | chr4.2:80695253-80695272 | MS.gene78812:intron | 30.0% |
| !! | TCTTCAATCAAAAGTGTTAG+AGG | - | chr4.2:80693406-80693425 | None:intergenic | 30.0% |
| !! | TTATCTTTGTCATTGACTCT+TGG | + | chr4.2:80694589-80694608 | MS.gene78812:intron | 30.0% |
| !! | TTGCTGGTTATTTCTTCTAT+AGG | + | chr4.2:80696510-80696529 | MS.gene78812:intron | 30.0% |
| !! | TTTCTATACGCATTTCTAGT+TGG | + | chr4.2:80694702-80694721 | MS.gene78812:intron | 30.0% |
| !! | TTTGATTTTCTTGACCTTCT+TGG | - | chr4.2:80696778-80696797 | None:intergenic | 30.0% |
| !!! | TGACACTACATGCTATTTTT+GGG | + | chr4.2:80695866-80695885 | MS.gene78812:intron | 30.0% |
| !!! | TTAACTTGCTTTTCAAGTGT+TGG | + | chr4.2:80693866-80693885 | MS.gene78812:intron | 30.0% |
| !!! | TTGACACTACATGCTATTTT+TGG | + | chr4.2:80695865-80695884 | MS.gene78812:intron | 30.0% |
| !!! | TTTGGATTAGGTTTTAGTTC+AGG | + | chr4.2:80693700-80693719 | MS.gene78812:intron | 30.0% |
| AAACATGAGAGATGCACAAA+GGG | - | chr4.2:80694571-80694590 | None:intergenic | 35.0% | |
| AAACTAAACAAACACACGCT+TGG | - | chr4.2:80694075-80694094 | None:intergenic | 35.0% | |
| ACAAATCACTGACACAAACA+CGG | - | chr4.2:80693632-80693651 | None:intergenic | 35.0% | |
| ATAACCAACCATACGTATCA+AGG | - | chr4.2:80693556-80693575 | None:intergenic | 35.0% | |
| ATCACTATCAGTCTTGATCT+TGG | - | chr4.2:80696728-80696747 | None:intergenic | 35.0% | |
| ATGGAAAAGCTTATTCAAGC+TGG | + | chr4.2:80694862-80694881 | MS.gene78812:CDS | 35.0% | |
| ATGTATCTTTGGATTGAAGG+TGG | + | chr4.2:80693972-80693991 | MS.gene78812:intron | 35.0% | |
| CGTTGTCTAATAGGAAATGA+AGG | - | chr4.2:80695361-80695380 | None:intergenic | 35.0% | |
| CTGGTGTTTCATATGTATCA+GGG | + | chr4.2:80693524-80693543 | MS.gene78812:intron | 35.0% | |
| GAAAGGAAATGACTTACGTT+TGG | - | chr4.2:80694292-80694311 | None:intergenic | 35.0% | |
| GGCAACATTTAATTGAAGGA+TGG | - | chr4.2:80696707-80696726 | None:intergenic | 35.0% | |
| GTGAACATAAGAGATGGAAA+TGG | + | chr4.2:80695290-80695309 | MS.gene78812:CDS | 35.0% | |
| GTTGAGAAGTTTACAGAAAG+TGG | + | chr4.2:80694487-80694506 | MS.gene78812:intron | 35.0% | |
| TAAACATGAGAGATGCACAA+AGG | - | chr4.2:80694572-80694591 | None:intergenic | 35.0% | |
| TCATTTCCTATTAGACAACG+GGG | + | chr4.2:80695361-80695380 | MS.gene78812:CDS | 35.0% | |
| TCTGGTGTTTCATATGTATC+AGG | + | chr4.2:80693523-80693542 | MS.gene78812:intron | 35.0% | |
| TGGCCATGTAGATTCATTAA+AGG | + | chr4.2:80695110-80695129 | MS.gene78812:CDS | 35.0% | |
| TTCTTAAGAGCAACTGTGAA+CGG | - | chr4.2:80696167-80696186 | None:intergenic | 35.0% | |
| TTTCATATGTATCAGGGTTG+TGG | + | chr4.2:80693530-80693549 | MS.gene78812:intron | 35.0% | |
| ! | CGTGTGTTTGTTTAGTTTCA+TGG | + | chr4.2:80694077-80694096 | MS.gene78812:intron | 35.0% |
| ! | TTGCACTATGCTGCTTATTA+TGG | + | chr4.2:80695090-80695109 | MS.gene78812:CDS | 35.0% |
| !! | AGTGGCTCTAAATGTATCTT+TGG | + | chr4.2:80693961-80693980 | MS.gene78812:intron | 35.0% |
| !! | GAAGTGTTTTGTGATTGGTT+TGG | + | chr4.2:80693655-80693674 | MS.gene78812:intron | 35.0% |
| !! | TACATTTTGGAGGTTCAATG+AGG | + | chr4.2:80694021-80694040 | MS.gene78812:intron | 35.0% |
| !! | TAGTAAGGCGTTTTCCAATA+AGG | - | chr4.2:80696294-80696313 | None:intergenic | 35.0% |
| !! | TCGTTCAATGATTTTGACAG+GGG | + | chr4.2:80695254-80695273 | MS.gene78812:intron | 35.0% |
| !! | TTGTGTTGATGATTGGTTAG+TGG | + | chr4.2:80694987-80695006 | MS.gene78812:intron | 35.0% |
| !! | TTTGTCATTGACTCTTGGTT+AGG | + | chr4.2:80694594-80694613 | MS.gene78812:intron | 35.0% |
| !!! | AGCGTCTTCCTTTGATTTTT+TGG | + | chr4.2:80696423-80696442 | MS.gene78812:intron | 35.0% |
| !!! | GTAGAGAAGTGTTTTGTGAT+TGG | + | chr4.2:80693650-80693669 | MS.gene78812:intron | 35.0% |
| ACAAAATGGACAAACTGGTC+CGG | - | chr4.2:80696677-80696696 | None:intergenic | 40.0% | |
| ACATATGTTTACTTACCCGG+AGG | - | chr4.2:80695609-80695628 | None:intergenic | 40.0% | |
| ACATGACACATCCATAGATG+GGG | - | chr4.2:80695199-80695218 | None:intergenic | 40.0% | |
| ACTAACCAAGAATCTGCAAC+AGG | - | chr4.2:80695162-80695181 | None:intergenic | 40.0% | |
| AGGACATTATGCAGATTTCC+TGG | + | chr4.2:80695491-80695510 | MS.gene78812:intron | 40.0% | |
| AGGCTTCAATTAGATTCCTC+CGG | + | chr4.2:80695590-80695609 | MS.gene78812:CDS | 40.0% | |
| AGTATGGTTGAGGATGATGT+TGG | + | chr4.2:80693295-80693314 | MS.gene78812:CDS | 40.0% | |
| ATTTAGCAGCTGCAAATGGT+CGG | + | chr4.2:80693362-80693381 | MS.gene78812:CDS | 40.0% | |
| CACATGACACATCCATAGAT+GGG | - | chr4.2:80695200-80695219 | None:intergenic | 40.0% | |
| CATAGACACACACCTGTTTA+TGG | - | chr4.2:80694669-80694688 | None:intergenic | 40.0% | |
| CTTCATTTAGCAGCTGCAAA+TGG | + | chr4.2:80693358-80693377 | MS.gene78812:CDS | 40.0% | |
| GAGAGAAAAGGCCCTATTAA+AGG | + | chr4.2:80696328-80696347 | MS.gene78812:CDS | 40.0% | |
| GCATTAATAACAAGTGTGCC+TGG | - | chr4.2:80694383-80694402 | None:intergenic | 40.0% | |
| GGCACAACAAGAATCAGAAT+TGG | - | chr4.2:80694778-80694797 | None:intergenic | 40.0% | |
| GTTAGTGGTTACTCAATCAG+AGG | + | chr4.2:80695002-80695021 | MS.gene78812:intron | 40.0% | |
| TACGTTTGATACGTTGATCC+AGG | + | chr4.2:80694362-80694381 | MS.gene78812:intron | 40.0% | |
| TCACATGACACATCCATAGA+TGG | - | chr4.2:80695201-80695220 | None:intergenic | 40.0% | |
| TCTCTAGACACCGTTAATGT+TGG | + | chr4.2:80694813-80694832 | MS.gene78812:intron | 40.0% | |
| TGATATTGTCTCGGATTCTG+AGG | + | chr4.2:80696397-80696416 | MS.gene78812:CDS | 40.0% | |
| TGCATCACAGCCAACATTAA+CGG | - | chr4.2:80694826-80694845 | None:intergenic | 40.0% | |
| TGTCTTGAATCGCCATAAAC+AGG | + | chr4.2:80694654-80694673 | MS.gene78812:CDS | 40.0% | |
| TTAGGTGCTTTCGATGTTGT+TGG | + | chr4.2:80694612-80694631 | MS.gene78812:intron | 40.0% | |
| TTCAAGAGTTTGTCAGCCAT+TGG | + | chr4.2:80696820-80696839 | MS.gene78812:CDS | 40.0% | |
| TTGGAGGTTCAATGAGGTAA+TGG | + | chr4.2:80694027-80694046 | MS.gene78812:intron | 40.0% | |
| TTTGCAGCTGCTAAATGAAG+AGG | - | chr4.2:80693358-80693377 | None:intergenic | 40.0% | |
| TTTGCTTCTGCTGTTGTGAA+TGG | + | chr4.2:80693253-80693272 | MS.gene78812:CDS | 40.0% | |
| ! | AATCAATCGAGTTGTGTGGT+GGG | + | chr4.2:80693196-80693215 | MS.gene78812:CDS | 40.0% |
| ! | CTTGGTTAGTCACTCTTTCA+TGG | + | chr4.2:80695172-80695191 | MS.gene78812:intron | 40.0% |
| ! | GCACACATTTGATGATCACA+AGG | - | chr4.2:80696595-80696614 | None:intergenic | 40.0% |
| ! | TCAGAATCAATCGAGTTGTG+TGG | + | chr4.2:80693192-80693211 | MS.gene78812:CDS | 40.0% |
| ! | TTAATGTTGGCTGTGATGCA+TGG | + | chr4.2:80694826-80694845 | MS.gene78812:CDS | 40.0% |
| ! | TTTTAGTGGCTGTATAGCGT+TGG | + | chr4.2:80693902-80693921 | MS.gene78812:intron | 40.0% |
| !! | AGACATCGACTTTGACATTC+CGG | - | chr4.2:80694639-80694658 | None:intergenic | 40.0% |
| !! | CGTTCAATGATTTTGACAGG+GGG | + | chr4.2:80695255-80695274 | MS.gene78812:intron | 40.0% |
| !! | GCGATTTGGAGTTAAGCTTT+TGG | + | chr4.2:80694516-80694535 | MS.gene78812:intron | 40.0% |
| !! | GGTGTTTTGGATAGTACTGT+TGG | + | chr4.2:80693316-80693335 | MS.gene78812:CDS | 40.0% |
| !! | GTAGCGATTGTGTTGATGAT+TGG | + | chr4.2:80694980-80694999 | MS.gene78812:intron | 40.0% |
| !! | TACTTGCTATCAGAACGTAG+TGG | - | chr4.2:80696374-80696393 | None:intergenic | 40.0% |
| !! | TGAGGATGATGTTGGTGTTT+TGG | + | chr4.2:80693303-80693322 | MS.gene78812:CDS | 40.0% |
| !!! | CTTGACCTTCTTGGTTTTGT+TGG | - | chr4.2:80696769-80696788 | None:intergenic | 40.0% |
| AAACAAACACACGCTTGGAC+TGG | - | chr4.2:80694070-80694089 | None:intergenic | 45.0% | |
| AAGAACACCGCTACATATGG+CGG | + | chr4.2:80695514-80695533 | MS.gene78812:CDS | 45.0% | |
| ACGCCTTACTAGAAGCTAAC+AGG | + | chr4.2:80696303-80696322 | MS.gene78812:CDS | 45.0% | |
| AGCTAACAGGGAGAGAGAAA+AGG | + | chr4.2:80696316-80696335 | MS.gene78812:CDS | 45.0% | |
| AGCTCGCTGATGAACTTTAG+CGG | - | chr4.2:80696254-80696273 | None:intergenic | 45.0% | |
| ATAAGCAGCATAGTGCAAGC+AGG | - | chr4.2:80695088-80695107 | None:intergenic | 45.0% | |
| ATATGTAGCGGTGTTCTTCC+AGG | - | chr4.2:80695512-80695531 | None:intergenic | 45.0% | |
| CCAGTCCAACAAAACCAAGA+AGG | + | chr4.2:80696761-80696780 | MS.gene78812:CDS | 45.0% | |
| CCTCGACAAAATGGACAAAC+TGG | - | chr4.2:80696682-80696701 | None:intergenic | 45.0% | |
| CGATTATTACCCGTATCCAC+CGG | - | chr4.2:80695405-80695424 | None:intergenic | 45.0% | |
| CGCCTTACTAGAAGCTAACA+GGG | + | chr4.2:80696304-80696323 | MS.gene78812:CDS | 45.0% | |
| CTGATGAACTTTAGCGGAGA+TGG | - | chr4.2:80696248-80696267 | None:intergenic | 45.0% | |
| CTTCACCTGTTGCAGATTCT+TGG | + | chr4.2:80695154-80695173 | MS.gene78812:CDS | 45.0% | |
| CTTCTGATTGAACACGTGTC+TGG | + | chr4.2:80693505-80693524 | MS.gene78812:intron | 45.0% | |
| GGCTTCAATTAGATTCCTCC+GGG | + | chr4.2:80695591-80695610 | MS.gene78812:CDS | 45.0% | |
| TCTTTCATGGTCCCCATCTA+TGG | + | chr4.2:80695185-80695204 | MS.gene78812:intron | 45.0% | |
| TGACCTCAATTGTGCACACT+TGG | - | chr4.2:80696570-80696589 | None:intergenic | 45.0% | |
| TGCTGTTGTGAATGGTGAGA+TGG | + | chr4.2:80693261-80693280 | MS.gene78812:CDS | 45.0% | |
| TGCTTTCGATGTTGTTGGAC+CGG | + | chr4.2:80694617-80694636 | MS.gene78812:CDS | 45.0% | |
| TGGAAGAACACCGCTACATA+TGG | + | chr4.2:80695511-80695530 | MS.gene78812:CDS | 45.0% | |
| ! | ATCAATCGAGTTGTGTGGTG+GGG | + | chr4.2:80693197-80693216 | MS.gene78812:CDS | 45.0% |
| ! | CCAGTTTGTCCATTTTGTCG+AGG | + | chr4.2:80696679-80696698 | MS.gene78812:CDS | 45.0% |
| ! | CTCCCTGTTAGCTTCTAGTA+AGG | - | chr4.2:80696309-80696328 | None:intergenic | 45.0% |
| ! | GAATCAATCGAGTTGTGTGG+TGG | + | chr4.2:80693195-80693214 | MS.gene78812:CDS | 45.0% |
| ! | GCTCTTGTTTGTGCTTCAAC+CGG | + | chr4.2:80695383-80695402 | MS.gene78812:CDS | 45.0% |
| ! | TCAAGAAGCCAAGGCCTTAT+TGG | + | chr4.2:80696277-80696296 | MS.gene78812:CDS | 45.0% |
| ! | TCAGAACGTAGTGGAGATGA+AGG | - | chr4.2:80696365-80696384 | None:intergenic | 45.0% |
| !! | GAAAGTGGCTCTAAGCGATT+TGG | + | chr4.2:80694502-80694521 | MS.gene78812:intron | 45.0% |
| !! | TTGTCAGCCATTGGCTCATT+CGG | + | chr4.2:80696829-80696848 | MS.gene78812:CDS | 45.0% |
| !!! | CCTTCTTGGTTTTGTTGGAC+TGG | - | chr4.2:80696764-80696783 | None:intergenic | 45.0% |
| AAATGGACAAACTGGTCCGG+TGG | - | chr4.2:80696674-80696693 | None:intergenic | 50.0% | |
| AAGAAGCCTGATCCTGCAAC+CGG | + | chr4.2:80696643-80696662 | MS.gene78812:CDS | 50.0% | |
| ACCTTGCTGCTCGTCATAGA+CGG | + | chr4.2:80695327-80695346 | MS.gene78812:CDS | 50.0% | |
| AGATGGCCAAACAAGAGGTG+CGG | - | chr4.2:80696231-80696250 | None:intergenic | 50.0% | |
| AGGATCGCTAGTCGCAATTC+AGG | + | chr4.2:80696853-80696872 | MS.gene78812:CDS | 50.0% | |
| AGGATGGCACCTCGACAAAA+TGG | - | chr4.2:80696691-80696710 | None:intergenic | 50.0% | |
| CAAGAGCCCCGTTGTCTAAT+AGG | - | chr4.2:80695370-80695389 | None:intergenic | 50.0% | |
| CGACCAAGTGTGCACAATTG+AGG | + | chr4.2:80696564-80696583 | MS.gene78812:CDS | 50.0% | |
| CGAGCTCAATCAAGAAGCCA+AGG | + | chr4.2:80696268-80696287 | MS.gene78812:CDS | 50.0% | |
| CGCTAGTCGCAATTCAGGAA+AGG | + | chr4.2:80696858-80696877 | MS.gene78812:CDS | 50.0% | |
| CTTGAGGCAGCATAGTGCTA+GGG | - | chr4.2:80696626-80696645 | None:intergenic | 50.0% | |
| CTTGTTTGTGCTTCAACCGG+TGG | + | chr4.2:80695386-80695405 | MS.gene78812:CDS | 50.0% | |
| GATCCTTCCGAATGAGCCAA+TGG | - | chr4.2:80696839-80696858 | None:intergenic | 50.0% | |
| GCTGTGATGCATGGAAAGAC+TGG | + | chr4.2:80694835-80694854 | MS.gene78812:CDS | 50.0% | |
| TCTTGAGGCAGCATAGTGCT+AGG | - | chr4.2:80696627-80696646 | None:intergenic | 50.0% | |
| TGTGCTTCAACCGGTGGATA+CGG | + | chr4.2:80695392-80695411 | MS.gene78812:CDS | 50.0% | |
| TTGCAGGATCAGGCTTCTTG+AGG | - | chr4.2:80696642-80696661 | None:intergenic | 50.0% | |
| ! | GCATGGAAAGACTGGTTGCA+TGG | + | chr4.2:80694843-80694862 | MS.gene78812:CDS | 50.0% |
| ! | GGCGTTTTCCAATAAGGCCT+TGG | - | chr4.2:80696288-80696307 | None:intergenic | 50.0% |
| ! | GGTTGTGGCCTTGATACGTA+TGG | + | chr4.2:80693545-80693564 | MS.gene78812:intron | 50.0% |
| ! | GTGGCCTTGATACGTATGGT+TGG | + | chr4.2:80693549-80693568 | MS.gene78812:intron | 50.0% |
| ! | TCAATCGAGTTGTGTGGTGG+GGG | + | chr4.2:80693198-80693217 | MS.gene78812:CDS | 50.0% |
| AGCGGAGATGGCCAAACAAG+AGG | - | chr4.2:80696236-80696255 | None:intergenic | 55.0% | |
| AGCTGCAAATGGTCGGATCG+AGG | + | chr4.2:80693369-80693388 | MS.gene78812:CDS | 55.0% | |
| CATCAGCCGCACCTCTTGTT+TGG | + | chr4.2:80696222-80696241 | MS.gene78812:CDS | 55.0% | |
| GTGCTTCAACCGGTGGATAC+GGG | + | chr4.2:80695393-80695412 | MS.gene78812:CDS | 55.0% | |
| TGCTTGCTTGGGGAGCAGAT+AGG | + | chr4.2:80695570-80695589 | MS.gene78812:CDS | 55.0% | |
| ! | AACAAGAGGTGCGGCTGATG+AGG | - | chr4.2:80696222-80696241 | None:intergenic | 55.0% |
| ! | ACAAGAGGTGCGGCTGATGA+GGG | - | chr4.2:80696221-80696240 | None:intergenic | 55.0% |
| ! | CAAACACACGCTTGGACTGG+CGG | - | chr4.2:80694067-80694086 | None:intergenic | 55.0% |
| ! | GTGGTTCTGTGGACTGTGTC+CGG | + | chr4.2:80695543-80695562 | MS.gene78812:CDS | 55.0% |
| ! | TGTCCGGATGCTGCTTGCTT+GGG | + | chr4.2:80695559-80695578 | MS.gene78812:CDS | 55.0% |
| !! | CAGCCATTGGCTCATTCGGA+AGG | + | chr4.2:80696833-80696852 | MS.gene78812:CDS | 55.0% |
| !! | GCTTGGACTGGCGGAAATCA+CGG | - | chr4.2:80694058-80694077 | None:intergenic | 55.0% |
| AACTGGTCCGGTGGTGCAAC+CGG | - | chr4.2:80696665-80696684 | None:intergenic | 60.0% | |
| CCACGAGCCGCCATATGTAG+CGG | - | chr4.2:80695524-80695543 | None:intergenic | 60.0% | |
| CTACATATGGCGGCTCGTGG+TGG | + | chr4.2:80695524-80695543 | MS.gene78812:CDS | 60.0% | |
| CTCCCCAAGCAAGCAGCATC+CGG | - | chr4.2:80695565-80695584 | None:intergenic | 60.0% | |
| GCCGTCTATGACGAGCAGCA+AGG | - | chr4.2:80695331-80695350 | None:intergenic | 60.0% | |
| GGCTGATGAGGGATCGAGCA+GGG | - | chr4.2:80696210-80696229 | None:intergenic | 60.0% | |
| GTGCAACCGGTTGCAGGATC+AGG | - | chr4.2:80696652-80696671 | None:intergenic | 60.0% | |
| TGACGAGCAGCAAGGTGCAG+CGG | - | chr4.2:80695323-80695342 | None:intergenic | 60.0% | |
| ! | GTCCGGATGCTGCTTGCTTG+GGG | + | chr4.2:80695560-80695579 | MS.gene78812:CDS | 60.0% |
| ! | GTGTCCGGATGCTGCTTGCT+TGG | + | chr4.2:80695558-80695577 | MS.gene78812:CDS | 60.0% |
| CCGCTACATATGGCGGCTCG+TGG | + | chr4.2:80695521-80695540 | MS.gene78812:CDS | 65.0% | |
| CCTGCAACCGGTTGCACCAC+CGG | + | chr4.2:80696655-80696674 | MS.gene78812:CDS | 65.0% | |
| CGGCTGATGAGGGATCGAGC+AGG | - | chr4.2:80696211-80696230 | None:intergenic | 65.0% | |
| AGCAGCAAGGTGCAGCGGCG+TGG | - | chr4.2:80695318-80695337 | None:intergenic | 70.0% | |
| CCGGTGGTGCAACCGGTTGC+AGG | - | chr4.2:80696658-80696677 | None:intergenic | 70.0% | |
| ! | GGCGGCTCGTGGTGGTTCTG+TGG | + | chr4.2:80695532-80695551 | MS.gene78812:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 80693187 | 80696900 | 80693187 | ID=MS.gene78812 |
| chr4.2 | mRNA | 80693187 | 80696900 | 80693187 | ID=MS.gene78812.t1;Parent=MS.gene78812 |
| chr4.2 | exon | 80693187 | 80693390 | 80693187 | ID=MS.gene78812.t1.exon1;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80693187 | 80693390 | 80693187 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80694616 | 80694675 | 80694616 | ID=MS.gene78812.t1.exon2;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80694616 | 80694675 | 80694616 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80694820 | 80694891 | 80694820 | ID=MS.gene78812.t1.exon3;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80694820 | 80694891 | 80694820 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80695054 | 80695175 | 80695054 | ID=MS.gene78812.t1.exon4;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80695054 | 80695175 | 80695054 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80695274 | 80695414 | 80695274 | ID=MS.gene78812.t1.exon5;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80695274 | 80695414 | 80695274 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80695505 | 80695612 | 80695505 | ID=MS.gene78812.t1.exon6;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80695505 | 80695612 | 80695505 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80696157 | 80696418 | 80696157 | ID=MS.gene78812.t1.exon7;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80696157 | 80696418 | 80696157 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| chr4.2 | exon | 80696532 | 80696900 | 80696532 | ID=MS.gene78812.t1.exon8;Parent=MS.gene78812.t1 |
| chr4.2 | CDS | 80696532 | 80696900 | 80696532 | ID=cds.MS.gene78812.t1;Parent=MS.gene78812.t1 |
| Gene Sequence |
| Protein sequence |
