Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80911.t1 | KEH21585.1 | 90.9 | 920 | 79 | 3 | 1 | 916 | 1 | 919 | 0.00E+00 | 1260.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80911.t1 | A0A072U6U7 | 90.9 | 920 | 79 | 3 | 1 | 916 | 1 | 919 | 0.0e+00 | 1260.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene80911 | 0.804223 | 2.39E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene80911 | 0.866222 | 3.34E-65 | -1.69E-46 |
| MS.gene050838 | MS.gene80911 | 0.829311 | 5.53E-55 | -1.69E-46 |
| MS.gene051102 | MS.gene80911 | 0.854219 | 1.42E-61 | -1.69E-46 |
| MS.gene051885 | MS.gene80911 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene80911 | 0.810686 | 1.02E-50 | -1.69E-46 |
| MS.gene052397 | MS.gene80911 | 0.8315 | 1.61E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene80911 | 0.823814 | 1.13E-53 | -1.69E-46 |
| MS.gene052732 | MS.gene80911 | 0.828769 | 7.48E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene80911 | 0.803424 | 3.51E-49 | -1.69E-46 |
| MS.gene053174 | MS.gene80911 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene80911 | 0.803745 | 3.01E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene80911 | 0.808201 | 3.48E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene80911 | 0.806839 | 6.77E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene80911 | 0.848443 | 6.11E-60 | -1.69E-46 |
| MS.gene055891 | MS.gene80911 | 0.828826 | 7.25E-55 | -1.69E-46 |
| MS.gene056432 | MS.gene80911 | 0.814987 | 1.16E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene80911 | 0.847282 | 1.28E-59 | -1.69E-46 |
| MS.gene058906 | MS.gene80911 | 0.803896 | 2.80E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene80911 | 0.85845 | 8.17E-63 | -1.69E-46 |
| MS.gene059937 | MS.gene80911 | 0.805587 | 1.24E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene80911 | 0.813981 | 1.94E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80911.t1 | MTR_7g007880 | 94.457 | 920 | 46 | 3 | 1 | 916 | 1 | 919 | 0.0 | 1712 |
| MS.gene80911.t1 | MTR_4g100530 | 31.752 | 274 | 130 | 7 | 27 | 293 | 33 | 256 | 4.50e-27 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80911.t1 | AT3G60380 | 35.211 | 284 | 122 | 13 | 47 | 320 | 51 | 282 | 1.39e-28 | 123 |
| MS.gene80911.t1 | AT4G16790 | 46.018 | 113 | 39 | 4 | 17 | 110 | 9 | 118 | 1.01e-17 | 87.8 |
Find 188 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAATTCTGATGATAATTT+TGG | 0.153084 | 7.3:+89733652 | MS.gene80911:CDS |
| GGTAAATATTTCAATGAAAA+TGG | 0.170433 | 7.3:+89733874 | MS.gene80911:CDS |
| GTGAGTGAAGATAGGGAATT+TGG | 0.171279 | 7.3:+89733943 | MS.gene80911:CDS |
| TTTCTCATCCTTCGCATTTC+AGG | 0.172291 | 7.3:+89735000 | MS.gene80911:CDS |
| CAAATTAGGCTTCAGAAAAT+TGG | 0.181564 | 7.3:+89735857 | MS.gene80911:CDS |
| CTCCCATAACTTGGTGAGTA+TGG | 0.203790 | 7.3:-89733350 | None:intergenic |
| ATTGGCATTGTTGTTGCTTA+TGG | 0.216714 | 7.3:+89733391 | MS.gene80911:CDS |
| GGATATGGATCCTTCGAATT+TGG | 0.219322 | 7.3:+89733966 | MS.gene80911:CDS |
| GGAAACATGCTGCACATTTA+AGG | 0.232974 | 7.3:+89734535 | MS.gene80911:CDS |
| TCCACACTCTTTGATGGTTC+TGG | 0.237883 | 7.3:-89735701 | None:intergenic |
| CGGTTTCCAAGTGGAAGATT+TGG | 0.247884 | 7.3:+89734848 | MS.gene80911:CDS |
| AATGGAAGTGATTCGAGTTT+AGG | 0.267445 | 7.3:+89733892 | MS.gene80911:CDS |
| ACCGGTTCGAAGTTTGAAAT+TGG | 0.270312 | 7.3:+89733828 | MS.gene80911:CDS |
| AATCCGCTGCAGGAAGGTTT+AGG | 0.273976 | 7.3:+89735155 | MS.gene80911:CDS |
| TGAGTTTCATCAACAGATAT+TGG | 0.296093 | 7.3:-89735023 | None:intergenic |
| ATGGAAAGGGAGAAAGTTTA+TGG | 0.296203 | 7.3:+89734072 | MS.gene80911:CDS |
| TCTGAATATGTCAATGATTC+AGG | 0.303389 | 7.3:+89735779 | MS.gene80911:CDS |
| AAGATTTCTCAGGTGTCTTC+AGG | 0.307288 | 7.3:+89734939 | MS.gene80911:CDS |
| AAGTCTTCCACACTCTTTGA+TGG | 0.315244 | 7.3:-89735707 | None:intergenic |
| AGATAGGGAATTTGGGGATA+TGG | 0.328683 | 7.3:+89733951 | MS.gene80911:CDS |
| AGAGCCAGTGGATTGCCTTC+AGG | 0.329099 | 7.3:+89735467 | MS.gene80911:CDS |
| TGAGTGAAGATAGGGAATTT+GGG | 0.332634 | 7.3:+89733944 | MS.gene80911:CDS |
| GAATTTCCATGAGATGGATT+TGG | 0.336254 | 7.3:+89734911 | MS.gene80911:CDS |
| AAAGTTTATGGCAATGATAA+TGG | 0.342619 | 7.3:+89734084 | MS.gene80911:CDS |
| TTCGCAGTTTAGGCCTCTTT+CGG | 0.342647 | 7.3:+89734110 | MS.gene80911:CDS |
| AAATTCATATCTTCAGAAAA+AGG | 0.344657 | 7.3:-89734894 | None:intergenic |
| AGGATTCAAAGAAGAGATTC+GGG | 0.347970 | 7.3:+89734459 | MS.gene80911:CDS |
| GGTTGGATGTGAGTGAAGAT+AGG | 0.353006 | 7.3:+89733935 | MS.gene80911:CDS |
| CACCTTCATCTTCGGCTAGA+AGG | 0.353682 | 7.3:+89735234 | MS.gene80911:CDS |
| AACGAAACCTCATCATGATT+TGG | 0.365971 | 7.3:-89735653 | None:intergenic |
| TTCGGAAAATATGAATTTCC+AGG | 0.367259 | 7.3:+89734734 | MS.gene80911:CDS |
| TCATAAACCTCTCGGATTAC+CGG | 0.367581 | 7.3:+89733810 | MS.gene80911:CDS |
| ATCCGCTGCAGGAAGGTTTA+GGG | 0.369848 | 7.3:+89735156 | MS.gene80911:CDS |
| GGTTTCCAAGTGGAAGATTT+GGG | 0.381927 | 7.3:+89734849 | MS.gene80911:CDS |
| TTCAAGTTCACCTTCATCTT+CGG | 0.382503 | 7.3:+89735226 | MS.gene80911:CDS |
| CCAGGTTCAAAGCTCAAATT+AGG | 0.386811 | 7.3:+89735843 | MS.gene80911:CDS |
| ATAATGGTTCTTCGCAGTTT+AGG | 0.387328 | 7.3:+89734100 | MS.gene80911:CDS |
| AAGGATTCAAAGAAGAGATT+CGG | 0.388441 | 7.3:+89734458 | MS.gene80911:CDS |
| AGAATAAGATGATGCATTGT+TGG | 0.390686 | 7.3:+89733554 | MS.gene80911:CDS |
| GGATTCCTATGTGCCTGCTT+TGG | 0.394775 | 7.3:+89734335 | MS.gene80911:CDS |
| CTTCTCCTTCGCCTATTGAC+TGG | 0.400771 | 7.3:+89734031 | MS.gene80911:CDS |
| ACCAATTTCAAACTTCGAAC+CGG | 0.402025 | 7.3:-89733829 | None:intergenic |
| TCTTTGGTGACAACAATGTT+AGG | 0.406561 | 7.3:+89735909 | MS.gene80911:CDS |
| AACCCATACTCACCAAGTTA+TGG | 0.407274 | 7.3:+89733347 | MS.gene80911:CDS |
| AATGAAACGATTGAACTTAG+AGG | 0.411541 | 7.3:+89734963 | MS.gene80911:CDS |
| AAATGGCTGCAATGAAGTTT+CGG | 0.412708 | 7.3:-89735261 | None:intergenic |
| ACCCATACTCACCAAGTTAT+GGG | 0.418982 | 7.3:+89733348 | MS.gene80911:CDS |
| GAATTTCCAAGAGGAAGATA+TGG | 0.421942 | 7.3:+89734785 | MS.gene80911:CDS |
| TGTGCTCCATATCTTCCTCT+TGG | 0.423735 | 7.3:-89734791 | None:intergenic |
| GAACTAATGTGATTCAATCT+TGG | 0.427598 | 7.3:+89733707 | MS.gene80911:CDS |
| TTTGTTCCACAACTTCCTCT+TGG | 0.428444 | 7.3:-89734689 | None:intergenic |
| CGCCTATTGACTGGAATTCG+AGG | 0.430155 | 7.3:+89734040 | MS.gene80911:CDS |
| GGTGATGCTTGGTTTGCATT+CGG | 0.430156 | 7.3:+89735382 | MS.gene80911:CDS |
| GAGCCAGTGGATTGCCTTCA+GGG | 0.430324 | 7.3:+89735468 | MS.gene80911:CDS |
| GACTTCCCCTTTGCATACTT+CGG | 0.437419 | 7.3:+89734716 | MS.gene80911:CDS |
| TTTAATGATGCTGCTGTTGA+TGG | 0.438444 | 7.3:+89733997 | MS.gene80911:CDS |
| TAATCTGAATGATGGCTTCA+AGG | 0.444395 | 7.3:+89735313 | MS.gene80911:CDS |
| TTCACGGTCTTTGCAGTCTG+TGG | 0.446276 | 7.3:+89735061 | MS.gene80911:CDS |
| GTTGATGAGACTAAGTTTGA+AGG | 0.446350 | 7.3:+89734132 | MS.gene80911:CDS |
| ACCGCAGGCGAGGATCCACC+TGG | 0.451847 | 7.3:+89735347 | MS.gene80911:CDS |
| CATTCAACATTACCAAAGTA+AGG | 0.454251 | 7.3:-89733772 | None:intergenic |
| AACTTGAATCACGTATTTCA+CGG | 0.455012 | 7.3:+89735045 | MS.gene80911:CDS |
| AACAGAAGAATGGGTACTAA+AGG | 0.456756 | 7.3:+89734513 | MS.gene80911:CDS |
| GTCTAGCAAAAGCTCTATCA+AGG | 0.459498 | 7.3:+89735423 | MS.gene80911:CDS |
| ATTGACTGGAATTCGAGGTT+TGG | 0.461403 | 7.3:+89734045 | MS.gene80911:CDS |
| ATCAAAGAGTGTGGAAGACT+TGG | 0.462435 | 7.3:+89735709 | MS.gene80911:CDS |
| GAGGCGTTCTTCTAAGAGGT+TGG | 0.470996 | 7.3:+89733918 | MS.gene80911:CDS |
| CCTAATTTGAGCTTTGAACC+TGG | 0.471755 | 7.3:-89735843 | None:intergenic |
| AAAGGTTGTTGTAAAGAAGC+TGG | 0.475609 | 7.3:+89735532 | MS.gene80911:CDS |
| TTCTTCTGTTTCTTAAAGAA+CGG | 0.479257 | 7.3:-89734500 | None:intergenic |
| AACAAAGAGTCGGTGATGCT+TGG | 0.482803 | 7.3:+89735371 | MS.gene80911:CDS |
| ACAGAAGAATGGGTACTAAA+GGG | 0.484475 | 7.3:+89734514 | MS.gene80911:CDS |
| GGATCAATTGAAAGATCAAA+AGG | 0.485031 | 7.3:+89735878 | MS.gene80911:CDS |
| GTTGTTGCTCAACCTTACTT+TGG | 0.489447 | 7.3:+89733760 | MS.gene80911:CDS |
| AATCAGATCTTCTATTCAAA+GGG | 0.490078 | 7.3:+89735600 | MS.gene80911:CDS |
| GAATTCGAGGTTTGGAAGGA+TGG | 0.490098 | 7.3:+89734053 | MS.gene80911:CDS |
| GTGAAGAAGCTCCCATAACT+TGG | 0.491959 | 7.3:-89733359 | None:intergenic |
| TTCTGATGAAACAGAATCTA+CGG | 0.492039 | 7.3:-89735126 | None:intergenic |
| AGATATGAATTTCCATGAGA+TGG | 0.492777 | 7.3:+89734905 | MS.gene80911:CDS |
| GAGACTAAGTTTGAAGGACT+TGG | 0.494783 | 7.3:+89734138 | MS.gene80911:CDS |
| TCACAGTCTTTCCAGTCGAC+AGG | 0.495798 | 7.3:+89734600 | MS.gene80911:CDS |
| GTGATTCGAGTTTAGGTTCG+AGG | 0.496075 | 7.3:+89733899 | MS.gene80911:CDS |
| TTAGTCTCATCAACCGAAAG+AGG | 0.499913 | 7.3:-89734123 | None:intergenic |
| AAGTATGCATATCTTCCTCC+TGG | 0.500568 | 7.3:-89734752 | None:intergenic |
| GTTGGATGTGAGTGAAGATA+GGG | 0.500698 | 7.3:+89733936 | MS.gene80911:CDS |
| CAACAATGCCAATGAAAAGA+AGG | 0.500909 | 7.3:-89733381 | None:intergenic |
| TCTTTAAGAAACAGAAGAAT+GGG | 0.500933 | 7.3:+89734504 | MS.gene80911:CDS |
| AATTGTTTCTCCAAATTCGA+AGG | 0.501586 | 7.3:-89733976 | None:intergenic |
| TTCTTTAAGAAACAGAAGAA+TGG | 0.502989 | 7.3:+89734503 | MS.gene80911:CDS |
| GTTGAATGTGGCGAGGTTGT+TGG | 0.503026 | 7.3:+89733787 | MS.gene80911:CDS |
| GAGGTTTGGAAGGATGGAAA+GGG | 0.503693 | 7.3:+89734059 | MS.gene80911:CDS |
| AAGAAGAGATTCGGGGAAGA+AGG | 0.503884 | 7.3:+89734467 | MS.gene80911:CDS |
| GAATCAGATCTTCTATTCAA+AGG | 0.504619 | 7.3:+89735599 | MS.gene80911:CDS |
| TTTGTCCCAAATCTTCCACT+TGG | 0.505382 | 7.3:-89734854 | None:intergenic |
| ATGATGCATTGTTGGAATGA+TGG | 0.506708 | 7.3:+89733562 | MS.gene80911:CDS |
| TTTGGCGACGAAGATTTCTC+AGG | 0.507356 | 7.3:+89734929 | MS.gene80911:CDS |
| CAATCACAAAACCCCATTTG+CGG | 0.508858 | 7.3:+89733200 | MS.gene80911:CDS |
| AAATCATGATGAGGTTTCGT+TGG | 0.512566 | 7.3:+89735655 | MS.gene80911:CDS |
| AGAAAATATGAATCCGCTGC+AGG | 0.514221 | 7.3:+89735145 | MS.gene80911:CDS |
| TCGTGTAGCAAGCTAACAAA+TGG | 0.514352 | 7.3:-89735278 | None:intergenic |
| TCACGGTCTTTGCAGTCTGT+GGG | 0.516041 | 7.3:+89735062 | MS.gene80911:CDS |
| TAGCAAGCAAGCCGATGAAA+AGG | 0.516544 | 7.3:+89735514 | MS.gene80911:CDS |
| CGAGGTTTGGAAGGATGGAA+AGG | 0.516878 | 7.3:+89734058 | MS.gene80911:CDS |
| TAACAAGCTTGAGAGCCTCC+AGG | 0.518168 | 7.3:+89735733 | MS.gene80911:CDS |
| GCATCGGATAATATCAATAC+GGG | 0.522599 | 7.3:+89734279 | MS.gene80911:CDS |
| GTTTGCATTCGGACTCAGAC+AGG | 0.524794 | 7.3:+89735393 | MS.gene80911:CDS |
| AATCTGAATGATGGCTTCAA+GGG | 0.525413 | 7.3:+89735314 | MS.gene80911:CDS |
| TCGTCGCCAAATCCATCTCA+TGG | 0.527693 | 7.3:-89734917 | None:intergenic |
| GTTCGAGGCGTTCTTCTAAG+AGG | 0.528027 | 7.3:+89733914 | MS.gene80911:CDS |
| GGGGAAAAGAAGAGCTTGCA+TGG | 0.528358 | 7.3:+89735176 | MS.gene80911:CDS |
| TTCGTTTGATTCGATTGCAT+CGG | 0.529575 | 7.3:+89734263 | MS.gene80911:CDS |
| TCCCATAACTTGGTGAGTAT+GGG | 0.529608 | 7.3:-89733349 | None:intergenic |
| GATGGCTTCAAGGGTAAAAG+TGG | 0.530296 | 7.3:+89735323 | MS.gene80911:CDS |
| TGAGTTTCATCAACAGACAT+TGG | 0.534052 | 7.3:-89734558 | None:intergenic |
| AAGCTAGTGAATTTATCGCC+AGG | 0.536727 | 7.3:+89735825 | MS.gene80911:CDS |
| TCCCCTAAACCTTCCTGCAG+CGG | 0.539101 | 7.3:-89735158 | None:intergenic |
| TGCATCGGATAATATCAATA+CGG | 0.539163 | 7.3:+89734278 | MS.gene80911:CDS |
| TGAAGAAGACGAAGAAGAAG+AGG | 0.540768 | 7.3:-89735207 | None:intergenic |
| AACCTCGAATTCCAGTCAAT+AGG | 0.541599 | 7.3:-89734042 | None:intergenic |
| ATCACCGACTCTTTGTTCCC+AGG | 0.542274 | 7.3:-89735365 | None:intergenic |
| ACTGGAATTCGAGGTTTGGA+AGG | 0.548857 | 7.3:+89734049 | MS.gene80911:CDS |
| GTTGTTGGTCATAAACCTCT+CGG | 0.552677 | 7.3:+89733802 | MS.gene80911:CDS |
| CGTCCCTGAAGGCAATCCAC+TGG | 0.554415 | 7.3:-89735471 | None:intergenic |
| TTGCATGCTTCAGAAAATGT+CGG | 0.555563 | 7.3:+89734828 | MS.gene80911:CDS |
| TGGAATGATGGGTCTAATGA+GGG | 0.558146 | 7.3:+89733574 | MS.gene80911:CDS |
| GTTTCTTAAAGAACGGCCCT+CGG | 0.558308 | 7.3:-89734493 | None:intergenic |
| ATAACTTGGTGAGTATGGGT+TGG | 0.559562 | 7.3:-89733345 | None:intergenic |
| CGCGAGAATGTATTCTTCGA+TGG | 0.559797 | 7.3:+89734638 | MS.gene80911:CDS |
| ATGAAACGATTGAACTTAGA+GGG | 0.560005 | 7.3:+89734964 | MS.gene80911:CDS |
| TGATGCATTGTTGGAATGAT+GGG | 0.560209 | 7.3:+89733563 | MS.gene80911:CDS |
| AAGGGTAAAAGTGGGACCGC+AGG | 0.562026 | 7.3:+89735332 | MS.gene80911:CDS |
| GAAATTGGTTGAAAGAGAAG+TGG | 0.570222 | 7.3:+89733843 | MS.gene80911:CDS |
| TCAACTTTCATCGTCCCTGA+AGG | 0.578610 | 7.3:-89735482 | None:intergenic |
| GGTGGTAATAGTAGTACTGT+TGG | 0.578659 | 7.3:+89733595 | MS.gene80911:CDS |
| CATCTTCATCTGAGCTACCC+TGG | 0.581301 | 7.3:-89735751 | None:intergenic |
| TTCCTTCTAGCCGAAGATGA+AGG | 0.582847 | 7.3:-89735236 | None:intergenic |
| ATGAAGAGTAATCTGAATGA+TGG | 0.584563 | 7.3:+89735305 | MS.gene80911:CDS |
| CGAAGAATACATTCTCGCGT+TGG | 0.584770 | 7.3:-89734634 | None:intergenic |
| GATGCTGCTGTTGATGGTGG+TGG | 0.584949 | 7.3:+89734003 | MS.gene80911:CDS |
| GAGTGAAGATAGGGAATTTG+GGG | 0.586049 | 7.3:+89733945 | MS.gene80911:CDS |
| AACAAGCTTGAGAGCCTCCA+GGG | 0.587449 | 7.3:+89735734 | MS.gene80911:CDS |
| GTTAGAACAAGAAGAGCCAG+TGG | 0.587680 | 7.3:+89735455 | MS.gene80911:CDS |
| ATATGTCAATGATTCAGGAC+TGG | 0.587716 | 7.3:+89735784 | MS.gene80911:CDS |
| TTGGAATGATGGGTCTAATG+AGG | 0.593162 | 7.3:+89733573 | MS.gene80911:CDS |
| AATGATGCTGCTGTTGATGG+TGG | 0.595623 | 7.3:+89734000 | MS.gene80911:CDS |
| AGAAAATATGAATTTCCAAG+AGG | 0.598753 | 7.3:+89734776 | MS.gene80911:CDS |
| TCTAGCAAAAGCTCTATCAA+GGG | 0.599294 | 7.3:+89735424 | MS.gene80911:CDS |
| TCCGCTGCAGGAAGGTTTAG+GGG | 0.600140 | 7.3:+89735157 | MS.gene80911:CDS |
| ACCAGAACCATCAAAGAGTG+TGG | 0.601044 | 7.3:+89735700 | MS.gene80911:CDS |
| TTCGAGACAACAGTGTGAGA+CGG | 0.605971 | 7.3:+89734370 | MS.gene80911:CDS |
| TACTTTGGTAATGTTGAATG+TGG | 0.608205 | 7.3:+89733775 | MS.gene80911:CDS |
| GTGAAATTGAGAATTCATGT+GGG | 0.608726 | 7.3:+89733524 | MS.gene80911:CDS |
| TTTGGTTGGATCCGCAAATG+GGG | 0.609216 | 7.3:-89733211 | None:intergenic |
| TGCAATCGAATCAAACGAAG+AGG | 0.612298 | 7.3:-89734259 | None:intergenic |
| AAGAGGAAGGGATGGAACAA+AGG | 0.613436 | 7.3:+89734439 | MS.gene80911:CDS |
| TGATTCAGGACTGGATTCTG+AGG | 0.613653 | 7.3:+89735793 | MS.gene80911:CDS |
| CCCAGGTGGATCCTCGCCTG+CGG | 0.615664 | 7.3:-89735348 | None:intergenic |
| CGAAGAAATGAGACAACAGA+AGG | 0.615667 | 7.3:+89734311 | MS.gene80911:CDS |
| AGAAATGAGACAACAGAAGG+AGG | 0.616109 | 7.3:+89734314 | MS.gene80911:CDS |
| TAAAAGTGGGACCGCAGGCG+AGG | 0.618491 | 7.3:+89735337 | MS.gene80911:CDS |
| ACCGACTCTTTGTTCCCAGG+TGG | 0.618912 | 7.3:-89735362 | None:intergenic |
| AGACTTCCAAGAGGAAGTTG+TGG | 0.620957 | 7.3:+89734683 | MS.gene80911:CDS |
| AATATGAATCCGCTGCAGGA+AGG | 0.621708 | 7.3:+89735149 | MS.gene80911:CDS |
| GAAAGAGAAGTGGATGGTGT+TGG | 0.626607 | 7.3:+89733853 | MS.gene80911:CDS |
| GAATTCCAGTCAATAGGCGA+AGG | 0.627295 | 7.3:-89734036 | None:intergenic |
| TTCGGGGAAGAAGGTATCCG+AGG | 0.630086 | 7.3:+89734476 | MS.gene80911:CDS |
| TTCAGGACTGGATTCTGAGG+TGG | 0.631137 | 7.3:+89735796 | MS.gene80911:CDS |
| TGTGAAATTGAGAATTCATG+TGG | 0.631268 | 7.3:+89733523 | MS.gene80911:CDS |
| GATATTGGCCTGAAATGCGA+AGG | 0.633118 | 7.3:-89735008 | None:intergenic |
| CTAGCAAAAGCTCTATCAAG+GGG | 0.633511 | 7.3:+89735425 | MS.gene80911:CDS |
| TCGGGGAAGAAGGTATCCGA+GGG | 0.635783 | 7.3:+89734477 | MS.gene80911:CDS |
| AGAAAATGTCGGTTTCCAAG+TGG | 0.639123 | 7.3:+89734839 | MS.gene80911:CDS |
| GGGTAGCTCAGATGAAGATG+TGG | 0.647307 | 7.3:+89735754 | MS.gene80911:CDS |
| AATGATGGGTCTAATGAGGG+TGG | 0.648862 | 7.3:+89733577 | MS.gene80911:CDS |
| TCCACCTGGGAACAAAGAGT+CGG | 0.658869 | 7.3:+89735361 | MS.gene80911:CDS |
| ATGGCTTCAAGGGTAAAAGT+GGG | 0.660908 | 7.3:+89735324 | MS.gene80911:CDS |
| CCGCAGGCGAGGATCCACCT+GGG | 0.665123 | 7.3:+89735348 | MS.gene80911:CDS |
| AAACGAAGAAGAATACATAC+CGG | 0.666042 | 7.3:-89734202 | None:intergenic |
| GGAAAATATGAATTTCCAGG+AGG | 0.667610 | 7.3:+89734737 | MS.gene80911:CDS |
| GAGACAACAGTGTGAGACGG+AGG | 0.678381 | 7.3:+89734373 | MS.gene80911:CDS |
| TTGGTTGAAAGAGAAGTGGA+TGG | 0.691598 | 7.3:+89733847 | MS.gene80911:CDS |
| TGGTAATGTTGAATGTGGCG+AGG | 0.695118 | 7.3:+89733780 | MS.gene80911:CDS |
| CTTCGAACCGGTAATCCGAG+AGG | 0.707153 | 7.3:-89733817 | None:intergenic |
| ACGTCGTTCTCTTCTCACGC+CGG | 0.709362 | 7.3:+89734183 | MS.gene80911:CDS |
| CTTCATCTGAGCTACCCTGG+AGG | 0.713788 | 7.3:-89735748 | None:intergenic |
| AGACACTATAGACTTCCAAG+AGG | 0.725110 | 7.3:+89734674 | MS.gene80911:CDS |
| GGATTCAAAGAAGAGATTCG+GGG | 0.744273 | 7.3:+89734460 | MS.gene80911:CDS |
| TAGCAAAAGCTCTATCAAGG+GGG | 0.752717 | 7.3:+89735426 | MS.gene80911:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATATCTTCAGAAAA+AGG | - | chr7.3:89734897-89734916 | None:intergenic | 20.0% |
| !! | GGTAAATATTTCAATGAAAA+TGG | + | chr7.3:89733874-89733893 | MS.gene80911:CDS | 20.0% |
| ! | AAAGTTTATGGCAATGATAA+TGG | + | chr7.3:89734084-89734103 | MS.gene80911:CDS | 25.0% |
| ! | AATCAGATCTTCTATTCAAA+GGG | + | chr7.3:89735600-89735619 | MS.gene80911:CDS | 25.0% |
| ! | AGAAAATATGAATTTCCAAG+AGG | + | chr7.3:89734776-89734795 | MS.gene80911:CDS | 25.0% |
| ! | TCAAAAGGTCAAAAAATCTT+TGG | + | chr7.3:89735893-89735912 | MS.gene80911:CDS | 25.0% |
| !! | AGAAAATATGATTTTCGAAG+AGG | + | chr7.3:89734422-89734441 | MS.gene80911:CDS | 25.0% |
| !! | ATCAGAATTCGACAATTTTT+CGG | - | chr7.3:89733644-89733663 | None:intergenic | 25.0% |
| !! | TCGAATTCTGATGATAATTT+TGG | + | chr7.3:89733652-89733671 | MS.gene80911:CDS | 25.0% |
| !! | TCTTTAAGAAACAGAAGAAT+GGG | + | chr7.3:89734504-89734523 | MS.gene80911:CDS | 25.0% |
| !! | TTCTTCTGTTTCTTAAAGAA+CGG | - | chr7.3:89734503-89734522 | None:intergenic | 25.0% |
| !! | TTCTTTAAGAAACAGAAGAA+TGG | + | chr7.3:89734503-89734522 | MS.gene80911:CDS | 25.0% |
| !!! | GATAATTTTGGTTATTCAGT+TGG | + | chr7.3:89733664-89733683 | MS.gene80911:CDS | 25.0% |
| !!! | TTACCTTTTTTGATTGGTTT+TGG | - | chr7.3:89733232-89733251 | None:intergenic | 25.0% |
| AAACGAAGAAGAATACATAC+CGG | - | chr7.3:89734205-89734224 | None:intergenic | 30.0% | |
| AACTTGAATCACGTATTTCA+CGG | + | chr7.3:89735045-89735064 | MS.gene80911:CDS | 30.0% | |
| AAGGATTCAAAGAAGAGATT+CGG | + | chr7.3:89734458-89734477 | MS.gene80911:CDS | 30.0% | |
| AATGAAACGATTGAACTTAG+AGG | + | chr7.3:89734963-89734982 | MS.gene80911:CDS | 30.0% | |
| AGAATAAGATGATGCATTGT+TGG | + | chr7.3:89733554-89733573 | MS.gene80911:CDS | 30.0% | |
| AGATATGAATTTCCATGAGA+TGG | + | chr7.3:89734905-89734924 | MS.gene80911:CDS | 30.0% | |
| ATGAAACGATTGAACTTAGA+GGG | + | chr7.3:89734964-89734983 | MS.gene80911:CDS | 30.0% | |
| ATGAAGAGTAATCTGAATGA+TGG | + | chr7.3:89735305-89735324 | MS.gene80911:CDS | 30.0% | |
| CAAATTAGGCTTCAGAAAAT+TGG | + | chr7.3:89735857-89735876 | MS.gene80911:CDS | 30.0% | |
| CAACCAAAACCAATCAAAAA+AGG | + | chr7.3:89733226-89733245 | MS.gene80911:CDS | 30.0% | |
| CATTCAACATTACCAAAGTA+AGG | - | chr7.3:89733775-89733794 | None:intergenic | 30.0% | |
| GAACTAATGTGATTCAATCT+TGG | + | chr7.3:89733707-89733726 | MS.gene80911:CDS | 30.0% | |
| GAATCAGATCTTCTATTCAA+AGG | + | chr7.3:89735599-89735618 | MS.gene80911:CDS | 30.0% | |
| GGATCAATTGAAAGATCAAA+AGG | + | chr7.3:89735878-89735897 | MS.gene80911:CDS | 30.0% | |
| GTGAAATTGAGAATTCATGT+GGG | + | chr7.3:89733524-89733543 | MS.gene80911:CDS | 30.0% | |
| TCTGAATATGTCAATGATTC+AGG | + | chr7.3:89735779-89735798 | MS.gene80911:CDS | 30.0% | |
| TGAGTTTCATCAACAGATAT+TGG | - | chr7.3:89735026-89735045 | None:intergenic | 30.0% | |
| TGCATCGGATAATATCAATA+CGG | + | chr7.3:89734278-89734297 | MS.gene80911:CDS | 30.0% | |
| TGTGAAATTGAGAATTCATG+TGG | + | chr7.3:89733523-89733542 | MS.gene80911:CDS | 30.0% | |
| TTCGGAAAATATGAATTTCC+AGG | + | chr7.3:89734734-89734753 | MS.gene80911:CDS | 30.0% | |
| TTCTGATGAAACAGAATCTA+CGG | - | chr7.3:89735129-89735148 | None:intergenic | 30.0% | |
| ! | AAAATCATATTTTCTCGAGC+AGG | - | chr7.3:89734417-89734436 | None:intergenic | 30.0% |
| ! | AAATTCTTCTTTTCCAAAGC+AGG | - | chr7.3:89734351-89734370 | None:intergenic | 30.0% |
| ! | AATATGATTTTCGAAGAGGA+AGG | + | chr7.3:89734426-89734445 | MS.gene80911:CDS | 30.0% |
| ! | AATTGTTTCTCCAAATTCGA+AGG | - | chr7.3:89733979-89733998 | None:intergenic | 30.0% |
| ! | ATATGATTTTCGAAGAGGAA+GGG | + | chr7.3:89734427-89734446 | MS.gene80911:CDS | 30.0% |
| ! | ATATTTTCCGAAGTATGCAA+AGG | - | chr7.3:89734726-89734745 | None:intergenic | 30.0% |
| ! | CTATTTTCCAAATCATGATG+AGG | + | chr7.3:89735646-89735665 | MS.gene80911:CDS | 30.0% |
| ! | CTTTACAACAACCTTTTCAT+CGG | - | chr7.3:89735528-89735547 | None:intergenic | 30.0% |
| ! | TATTTTCCGAAGTATGCAAA+GGG | - | chr7.3:89734725-89734744 | None:intergenic | 30.0% |
| ! | TTTCCTGCTTCAACTATTTT+TGG | + | chr7.3:89733493-89733512 | MS.gene80911:CDS | 30.0% |
| !! | TACTTTGGTAATGTTGAATG+TGG | + | chr7.3:89733775-89733794 | MS.gene80911:CDS | 30.0% |
| !!! | ATTTTCTGAAGCATGCAAAT+AGG | - | chr7.3:89734826-89734845 | None:intergenic | 30.0% |
| !!! | CAAGAGTTACCTTTTTTGAT+TGG | - | chr7.3:89733238-89733257 | None:intergenic | 30.0% |
| !!! | CTTTTTTGATTGGTTTTGGT+TGG | - | chr7.3:89733228-89733247 | None:intergenic | 30.0% |
| AAAAATTCAGGAGCTTGTGA+AGG | - | chr7.3:89733322-89733341 | None:intergenic | 35.0% | |
| AAAGGTTGTTGTAAAGAAGC+TGG | + | chr7.3:89735532-89735551 | MS.gene80911:CDS | 35.0% | |
| AAATCATGATGAGGTTTCGT+TGG | + | chr7.3:89735655-89735674 | MS.gene80911:CDS | 35.0% | |
| AAATGGCTGCAATGAAGTTT+CGG | - | chr7.3:89735264-89735283 | None:intergenic | 35.0% | |
| AACAGAAGAATGGGTACTAA+AGG | + | chr7.3:89734513-89734532 | MS.gene80911:CDS | 35.0% | |
| AACGAAACCTCATCATGATT+TGG | - | chr7.3:89735656-89735675 | None:intergenic | 35.0% | |
| AATCTGAATGATGGCTTCAA+GGG | + | chr7.3:89735314-89735333 | MS.gene80911:CDS | 35.0% | |
| ACAGAAGAATGGGTACTAAA+GGG | + | chr7.3:89734514-89734533 | MS.gene80911:CDS | 35.0% | |
| ACCAATTTCAAACTTCGAAC+CGG | - | chr7.3:89733832-89733851 | None:intergenic | 35.0% | |
| AGGATTCAAAGAAGAGATTC+GGG | + | chr7.3:89734459-89734478 | MS.gene80911:CDS | 35.0% | |
| ATAATGGTTCTTCGCAGTTT+AGG | + | chr7.3:89734100-89734119 | MS.gene80911:CDS | 35.0% | |
| ATATGTCAATGATTCAGGAC+TGG | + | chr7.3:89735784-89735803 | MS.gene80911:CDS | 35.0% | |
| ATGATGCATTGTTGGAATGA+TGG | + | chr7.3:89733562-89733581 | MS.gene80911:CDS | 35.0% | |
| ATGGAAAGGGAGAAAGTTTA+TGG | + | chr7.3:89734072-89734091 | MS.gene80911:CDS | 35.0% | |
| CAACAATGCCAATGAAAAGA+AGG | - | chr7.3:89733384-89733403 | None:intergenic | 35.0% | |
| GAAATTGGTTGAAAGAGAAG+TGG | + | chr7.3:89733843-89733862 | MS.gene80911:CDS | 35.0% | |
| GAATTTCCAAGAGGAAGATA+TGG | + | chr7.3:89734785-89734804 | MS.gene80911:CDS | 35.0% | |
| GCATCGGATAATATCAATAC+GGG | + | chr7.3:89734279-89734298 | MS.gene80911:CDS | 35.0% | |
| GGAAAATATGAATTTCCAGG+AGG | + | chr7.3:89734737-89734756 | MS.gene80911:CDS | 35.0% | |
| TAATCTGAATGATGGCTTCA+AGG | + | chr7.3:89735313-89735332 | MS.gene80911:CDS | 35.0% | |
| TCACCAAAAATAGTTGAAGC+AGG | - | chr7.3:89733499-89733518 | None:intergenic | 35.0% | |
| TCTAGCAAAAGCTCTATCAA+GGG | + | chr7.3:89735424-89735443 | MS.gene80911:CDS | 35.0% | |
| TGAGTGAAGATAGGGAATTT+GGG | + | chr7.3:89733944-89733963 | MS.gene80911:CDS | 35.0% | |
| TGAGTTTCATCAACAGACAT+TGG | - | chr7.3:89734561-89734580 | None:intergenic | 35.0% | |
| TGATGCATTGTTGGAATGAT+GGG | + | chr7.3:89733563-89733582 | MS.gene80911:CDS | 35.0% | |
| TTGCATGCTTCAGAAAATGT+CGG | + | chr7.3:89734828-89734847 | MS.gene80911:CDS | 35.0% | |
| TTTAATGATGCTGCTGTTGA+TGG | + | chr7.3:89733997-89734016 | MS.gene80911:CDS | 35.0% | |
| ! | AATGGAAGTGATTCGAGTTT+AGG | + | chr7.3:89733892-89733911 | MS.gene80911:CDS | 35.0% |
| ! | ATTGGCATTGTTGTTGCTTA+TGG | + | chr7.3:89733391-89733410 | MS.gene80911:CDS | 35.0% |
| ! | ATTTTCCGAAGTATGCAAAG+GGG | - | chr7.3:89734724-89734743 | None:intergenic | 35.0% |
| ! | CTTCTTCACCTTCTTTTCAT+TGG | + | chr7.3:89733373-89733392 | MS.gene80911:CDS | 35.0% |
| ! | GAATTTCCATGAGATGGATT+TGG | + | chr7.3:89734911-89734930 | MS.gene80911:CDS | 35.0% |
| ! | GTTGATGAGACTAAGTTTGA+AGG | + | chr7.3:89734132-89734151 | MS.gene80911:CDS | 35.0% |
| ! | TCTTTGGTGACAACAATGTT+AGG | + | chr7.3:89735909-89735928 | MS.gene80911:CDS | 35.0% |
| ! | TTCAAGTTCACCTTCATCTT+CGG | + | chr7.3:89735226-89735245 | MS.gene80911:CDS | 35.0% |
| ! | TTCGTTTGATTCGATTGCAT+CGG | + | chr7.3:89734218-89734237 | MS.gene80911:CDS | 35.0% |
| !! | ATGGGTTGGTTCAAAAATTC+AGG | - | chr7.3:89733334-89733353 | None:intergenic | 35.0% |
| !!! | GGTTATTCAGTTGGTTTTGA+TGG | + | chr7.3:89733673-89733692 | MS.gene80911:CDS | 35.0% |
| !!! | TATTCAGTTGGTTTTGATGG+TGG | + | chr7.3:89733676-89733695 | MS.gene80911:CDS | 35.0% |
| AACCCATACTCACCAAGTTA+TGG | + | chr7.3:89733347-89733366 | MS.gene80911:CDS | 40.0% | |
| AACCTCGAATTCCAGTCAAT+AGG | - | chr7.3:89734045-89734064 | None:intergenic | 40.0% | |
| AAGATTTCTCAGGTGTCTTC+AGG | + | chr7.3:89734939-89734958 | MS.gene80911:CDS | 40.0% | |
| AAGCTAGTGAATTTATCGCC+AGG | + | chr7.3:89735825-89735844 | MS.gene80911:CDS | 40.0% | |
| AAGTATGCATATCTTCCTCC+TGG | - | chr7.3:89734755-89734774 | None:intergenic | 40.0% | |
| AAGTCTTCCACACTCTTTGA+TGG | - | chr7.3:89735710-89735729 | None:intergenic | 40.0% | |
| ACCCATACTCACCAAGTTAT+GGG | + | chr7.3:89733348-89733367 | MS.gene80911:CDS | 40.0% | |
| AGAAAATATGAATCCGCTGC+AGG | + | chr7.3:89735145-89735164 | MS.gene80911:CDS | 40.0% | |
| AGAAATGAGACAACAGAAGG+AGG | + | chr7.3:89734314-89734333 | MS.gene80911:CDS | 40.0% | |
| AGACACTATAGACTTCCAAG+AGG | + | chr7.3:89734674-89734693 | MS.gene80911:CDS | 40.0% | |
| AGATAGGGAATTTGGGGATA+TGG | + | chr7.3:89733951-89733970 | MS.gene80911:CDS | 40.0% | |
| ATGGCTTCAAGGGTAAAAGT+GGG | + | chr7.3:89735324-89735343 | MS.gene80911:CDS | 40.0% | |
| ATTGACTGGAATTCGAGGTT+TGG | + | chr7.3:89734045-89734064 | MS.gene80911:CDS | 40.0% | |
| CAATCACAAAACCCCATTTG+CGG | + | chr7.3:89733200-89733219 | MS.gene80911:CDS | 40.0% | |
| CCAGGTTCAAAGCTCAAATT+AGG | + | chr7.3:89735843-89735862 | MS.gene80911:CDS | 40.0% | |
| CGAAGAAATGAGACAACAGA+AGG | + | chr7.3:89734311-89734330 | MS.gene80911:CDS | 40.0% | |
| CTAGCAAAAGCTCTATCAAG+GGG | + | chr7.3:89735425-89735444 | MS.gene80911:CDS | 40.0% | |
| GAGACTAAGTTTGAAGGACT+TGG | + | chr7.3:89734138-89734157 | MS.gene80911:CDS | 40.0% | |
| GAGTGAAGATAGGGAATTTG+GGG | + | chr7.3:89733945-89733964 | MS.gene80911:CDS | 40.0% | |
| GGAAACATGCTGCACATTTA+AGG | + | chr7.3:89734535-89734554 | MS.gene80911:CDS | 40.0% | |
| GGATATGGATCCTTCGAATT+TGG | + | chr7.3:89733966-89733985 | MS.gene80911:CDS | 40.0% | |
| GGATTCAAAGAAGAGATTCG+GGG | + | chr7.3:89734460-89734479 | MS.gene80911:CDS | 40.0% | |
| GGTGGTAATAGTAGTACTGT+TGG | + | chr7.3:89733595-89733614 | MS.gene80911:CDS | 40.0% | |
| GGTTTCCAAGTGGAAGATTT+GGG | + | chr7.3:89734849-89734868 | MS.gene80911:CDS | 40.0% | |
| GTCTAGCAAAAGCTCTATCA+AGG | + | chr7.3:89735423-89735442 | MS.gene80911:CDS | 40.0% | |
| GTGAGTGAAGATAGGGAATT+TGG | + | chr7.3:89733943-89733962 | MS.gene80911:CDS | 40.0% | |
| GTTGGATGTGAGTGAAGATA+GGG | + | chr7.3:89733936-89733955 | MS.gene80911:CDS | 40.0% | |
| GTTGTTGCTCAACCTTACTT+TGG | + | chr7.3:89733760-89733779 | MS.gene80911:CDS | 40.0% | |
| GTTGTTGGTCATAAACCTCT+CGG | + | chr7.3:89733802-89733821 | MS.gene80911:CDS | 40.0% | |
| TAGCAAAAGCTCTATCAAGG+GGG | + | chr7.3:89735426-89735445 | MS.gene80911:CDS | 40.0% | |
| TCATAAACCTCTCGGATTAC+CGG | + | chr7.3:89733810-89733829 | MS.gene80911:CDS | 40.0% | |
| TCGTGTAGCAAGCTAACAAA+TGG | - | chr7.3:89735281-89735300 | None:intergenic | 40.0% | |
| TGAAGAAGACGAAGAAGAAG+AGG | - | chr7.3:89735210-89735229 | None:intergenic | 40.0% | |
| TGCAATCGAATCAAACGAAG+AGG | - | chr7.3:89734217-89734236 | None:intergenic | 40.0% | |
| TTAGTCTCATCAACCGAAAG+AGG | - | chr7.3:89734126-89734145 | None:intergenic | 40.0% | |
| TTGGTTGAAAGAGAAGTGGA+TGG | + | chr7.3:89733847-89733866 | MS.gene80911:CDS | 40.0% | |
| TTTCTCATCCTTCGCATTTC+AGG | + | chr7.3:89735000-89735019 | MS.gene80911:CDS | 40.0% | |
| TTTGTCCCAAATCTTCCACT+TGG | - | chr7.3:89734857-89734876 | None:intergenic | 40.0% | |
| TTTGTTCCACAACTTCCTCT+TGG | - | chr7.3:89734692-89734711 | None:intergenic | 40.0% | |
| ! | AGAGCTTTTGCTAGACTTGT+TGG | - | chr7.3:89735419-89735438 | None:intergenic | 40.0% |
| ! | ATAACTTGGTGAGTATGGGT+TGG | - | chr7.3:89733348-89733367 | None:intergenic | 40.0% |
| ! | ATCAAAGAGTGTGGAAGACT+TGG | + | chr7.3:89735709-89735728 | MS.gene80911:CDS | 40.0% |
| ! | TCCCATAACTTGGTGAGTAT+GGG | - | chr7.3:89733352-89733371 | None:intergenic | 40.0% |
| !! | ACCGGTTCGAAGTTTGAAAT+TGG | + | chr7.3:89733828-89733847 | MS.gene80911:CDS | 40.0% |
| !! | AGAAAATGTCGGTTTCCAAG+TGG | + | chr7.3:89734839-89734858 | MS.gene80911:CDS | 40.0% |
| !! | CCTAATTTGAGCTTTGAACC+TGG | - | chr7.3:89735846-89735865 | None:intergenic | 40.0% |
| !! | GCAAATGGGGTTTTGTGATT+GGG | - | chr7.3:89733201-89733220 | None:intergenic | 40.0% |
| !! | TGGAATGATGGGTCTAATGA+GGG | + | chr7.3:89733574-89733593 | MS.gene80911:CDS | 40.0% |
| !! | TTGGAATGATGGGTCTAATG+AGG | + | chr7.3:89733573-89733592 | MS.gene80911:CDS | 40.0% |
| !! | TTTTGGTTGGATCCGCAAAT+GGG | - | chr7.3:89733215-89733234 | None:intergenic | 40.0% |
| !!! | GGTTTTGATGGTGGAAATGA+TGG | + | chr7.3:89733685-89733704 | MS.gene80911:CDS | 40.0% |
| AACAAAGAGTCGGTGATGCT+TGG | + | chr7.3:89735371-89735390 | MS.gene80911:CDS | 45.0% | |
| AAGAAGAGATTCGGGGAAGA+AGG | + | chr7.3:89734467-89734486 | MS.gene80911:CDS | 45.0% | |
| AAGAGGAAGGGATGGAACAA+AGG | + | chr7.3:89734439-89734458 | MS.gene80911:CDS | 45.0% | |
| AATATGAATCCGCTGCAGGA+AGG | + | chr7.3:89735149-89735168 | MS.gene80911:CDS | 45.0% | |
| ACCAGAACCATCAAAGAGTG+TGG | + | chr7.3:89735700-89735719 | MS.gene80911:CDS | 45.0% | |
| ACTGGAATTCGAGGTTTGGA+AGG | + | chr7.3:89734049-89734068 | MS.gene80911:CDS | 45.0% | |
| AGACTTCCAAGAGGAAGTTG+TGG | + | chr7.3:89734683-89734702 | MS.gene80911:CDS | 45.0% | |
| CAGAAAAAGATCCTGTCGAC+TGG | - | chr7.3:89734614-89734633 | None:intergenic | 45.0% | |
| CGAAGAATACATTCTCGCGT+TGG | - | chr7.3:89734637-89734656 | None:intergenic | 45.0% | |
| CGCGAGAATGTATTCTTCGA+TGG | + | chr7.3:89734638-89734657 | MS.gene80911:CDS | 45.0% | |
| CGGTTTCCAAGTGGAAGATT+TGG | + | chr7.3:89734848-89734867 | MS.gene80911:CDS | 45.0% | |
| GAAAGAGAAGTGGATGGTGT+TGG | + | chr7.3:89733853-89733872 | MS.gene80911:CDS | 45.0% | |
| GAATTCCAGTCAATAGGCGA+AGG | - | chr7.3:89734039-89734058 | None:intergenic | 45.0% | |
| GAATTCGAGGTTTGGAAGGA+TGG | + | chr7.3:89734053-89734072 | MS.gene80911:CDS | 45.0% | |
| GACTTCCCCTTTGCATACTT+CGG | + | chr7.3:89734716-89734735 | MS.gene80911:CDS | 45.0% | |
| GAGGTTTGGAAGGATGGAAA+GGG | + | chr7.3:89734059-89734078 | MS.gene80911:CDS | 45.0% | |
| GATGGCTTCAAGGGTAAAAG+TGG | + | chr7.3:89735323-89735342 | MS.gene80911:CDS | 45.0% | |
| GGAGCTTGTGAAGGAAAAAG+TGG | - | chr7.3:89733313-89733332 | None:intergenic | 45.0% | |
| GGTTGGATGTGAGTGAAGAT+AGG | + | chr7.3:89733935-89733954 | MS.gene80911:CDS | 45.0% | |
| GTGAAGAAGCTCCCATAACT+TGG | - | chr7.3:89733362-89733381 | None:intergenic | 45.0% | |
| GTTAGAACAAGAAGAGCCAG+TGG | + | chr7.3:89735455-89735474 | MS.gene80911:CDS | 45.0% | |
| GTTTCTTAAAGAACGGCCCT+CGG | - | chr7.3:89734496-89734515 | None:intergenic | 45.0% | |
| TAGCAAGCAAGCCGATGAAA+AGG | + | chr7.3:89735514-89735533 | MS.gene80911:CDS | 45.0% | |
| TCAACTTTCATCGTCCCTGA+AGG | - | chr7.3:89735485-89735504 | None:intergenic | 45.0% | |
| TGATTCAGGACTGGATTCTG+AGG | + | chr7.3:89735793-89735812 | MS.gene80911:CDS | 45.0% | |
| TGTGCTCCATATCTTCCTCT+TGG | - | chr7.3:89734794-89734813 | None:intergenic | 45.0% | |
| TTCCTTCTAGCCGAAGATGA+AGG | - | chr7.3:89735239-89735258 | None:intergenic | 45.0% | |
| TTCGAGACAACAGTGTGAGA+CGG | + | chr7.3:89734370-89734389 | MS.gene80911:CDS | 45.0% | |
| TTCGCAGTTTAGGCCTCTTT+CGG | + | chr7.3:89734110-89734129 | MS.gene80911:CDS | 45.0% | |
| TTTGGCGACGAAGATTTCTC+AGG | + | chr7.3:89734929-89734948 | MS.gene80911:CDS | 45.0% | |
| TTTGGTTGGATCCGCAAATG+GGG | - | chr7.3:89733214-89733233 | None:intergenic | 45.0% | |
| ! | AATGATGCTGCTGTTGATGG+TGG | + | chr7.3:89734000-89734019 | MS.gene80911:CDS | 45.0% |
| ! | CTCCCATAACTTGGTGAGTA+TGG | - | chr7.3:89733353-89733372 | None:intergenic | 45.0% |
| ! | CTTTTCCAAAGCAGGCACAT+AGG | - | chr7.3:89734343-89734362 | None:intergenic | 45.0% |
| ! | GATATTGGCCTGAAATGCGA+AGG | - | chr7.3:89735011-89735030 | None:intergenic | 45.0% |
| ! | GATTTTCGAAGAGGAAGGGA+TGG | + | chr7.3:89734431-89734450 | MS.gene80911:CDS | 45.0% |
| ! | GTGATTCGAGTTTAGGTTCG+AGG | + | chr7.3:89733899-89733918 | MS.gene80911:CDS | 45.0% |
| ! | TCCACACTCTTTGATGGTTC+TGG | - | chr7.3:89735704-89735723 | None:intergenic | 45.0% |
| ! | TGGTAATGTTGAATGTGGCG+AGG | + | chr7.3:89733780-89733799 | MS.gene80911:CDS | 45.0% |
| !! | AATGATGGGTCTAATGAGGG+TGG | + | chr7.3:89733577-89733596 | MS.gene80911:CDS | 45.0% |
| !! | CGCAAATGGGGTTTTGTGAT+TGG | - | chr7.3:89733202-89733221 | None:intergenic | 45.0% |
| !! | GGTGATGCTTGGTTTGCATT+CGG | + | chr7.3:89735382-89735401 | MS.gene80911:CDS | 45.0% |
| !! | TGGGGTTTTGTGATTGGGAT+TGG | - | chr7.3:89733196-89733215 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTGGATCCGCAAA+TGG | - | chr7.3:89733216-89733235 | None:intergenic | 45.0% |
| AACAAGCTTGAGAGCCTCCA+GGG | + | chr7.3:89735734-89735753 | MS.gene80911:CDS | 50.0% | |
| AATCCGCTGCAGGAAGGTTT+AGG | + | chr7.3:89735155-89735174 | MS.gene80911:CDS | 50.0% | |
| ATCCGCTGCAGGAAGGTTTA+GGG | + | chr7.3:89735156-89735175 | MS.gene80911:CDS | 50.0% | |
| CACCTTCATCTTCGGCTAGA+AGG | + | chr7.3:89735234-89735253 | MS.gene80911:CDS | 50.0% | |
| CATCTTCATCTGAGCTACCC+TGG | - | chr7.3:89735754-89735773 | None:intergenic | 50.0% | |
| CGAGGTTTGGAAGGATGGAA+AGG | + | chr7.3:89734058-89734077 | MS.gene80911:CDS | 50.0% | |
| CTTCTCCTTCGCCTATTGAC+TGG | + | chr7.3:89734031-89734050 | MS.gene80911:CDS | 50.0% | |
| GGATTCCTATGTGCCTGCTT+TGG | + | chr7.3:89734335-89734354 | MS.gene80911:CDS | 50.0% | |
| GGGGAAAAGAAGAGCTTGCA+TGG | + | chr7.3:89735176-89735195 | MS.gene80911:CDS | 50.0% | |
| GGGTAGCTCAGATGAAGATG+TGG | + | chr7.3:89735754-89735773 | MS.gene80911:CDS | 50.0% | |
| GTTGAATGTGGCGAGGTTGT+TGG | + | chr7.3:89733787-89733806 | MS.gene80911:CDS | 50.0% | |
| GTTTGCATTCGGACTCAGAC+AGG | + | chr7.3:89735393-89735412 | MS.gene80911:CDS | 50.0% | |
| TAACAAGCTTGAGAGCCTCC+AGG | + | chr7.3:89735733-89735752 | MS.gene80911:CDS | 50.0% | |
| TCACAGTCTTTCCAGTCGAC+AGG | + | chr7.3:89734600-89734619 | MS.gene80911:CDS | 50.0% | |
| TCACGGTCTTTGCAGTCTGT+GGG | + | chr7.3:89735062-89735081 | MS.gene80911:CDS | 50.0% | |
| TCCACCTGGGAACAAAGAGT+CGG | + | chr7.3:89735361-89735380 | MS.gene80911:CDS | 50.0% | |
| TCGTCGCCAAATCCATCTCA+TGG | - | chr7.3:89734920-89734939 | None:intergenic | 50.0% | |
| TTCACGGTCTTTGCAGTCTG+TGG | + | chr7.3:89735061-89735080 | MS.gene80911:CDS | 50.0% | |
| ! | CGCCTATTGACTGGAATTCG+AGG | + | chr7.3:89734040-89734059 | MS.gene80911:CDS | 50.0% |
| ! | GAGGCGTTCTTCTAAGAGGT+TGG | + | chr7.3:89733918-89733937 | MS.gene80911:CDS | 50.0% |
| ! | GTTCGAGGCGTTCTTCTAAG+AGG | + | chr7.3:89733914-89733933 | MS.gene80911:CDS | 50.0% |
| ! | TTCAGGACTGGATTCTGAGG+TGG | + | chr7.3:89735796-89735815 | MS.gene80911:CDS | 50.0% |
| !! | ATCACCGACTCTTTGTTCCC+AGG | - | chr7.3:89735368-89735387 | None:intergenic | 50.0% |
| AAGGGTAAAAGTGGGACCGC+AGG | + | chr7.3:89735332-89735351 | MS.gene80911:CDS | 55.0% | |
| ACGTCGTTCTCTTCTCACGC+CGG | + | chr7.3:89734183-89734202 | MS.gene80911:CDS | 55.0% | |
| CTTCATCTGAGCTACCCTGG+AGG | - | chr7.3:89735751-89735770 | None:intergenic | 55.0% | |
| CTTCGAACCGGTAATCCGAG+AGG | - | chr7.3:89733820-89733839 | None:intergenic | 55.0% | |
| GAGACAACAGTGTGAGACGG+AGG | + | chr7.3:89734373-89734392 | MS.gene80911:CDS | 55.0% | |
| TCCCCTAAACCTTCCTGCAG+CGG | - | chr7.3:89735161-89735180 | None:intergenic | 55.0% | |
| TCCGCTGCAGGAAGGTTTAG+GGG | + | chr7.3:89735157-89735176 | MS.gene80911:CDS | 55.0% | |
| ! | ACCGACTCTTTGTTCCCAGG+TGG | - | chr7.3:89735365-89735384 | None:intergenic | 55.0% |
| !! | AGAGCCAGTGGATTGCCTTC+AGG | + | chr7.3:89735467-89735486 | MS.gene80911:CDS | 55.0% |
| !! | GAGCCAGTGGATTGCCTTCA+GGG | + | chr7.3:89735468-89735487 | MS.gene80911:CDS | 55.0% |
| !! | GATGCTGCTGTTGATGGTGG+TGG | + | chr7.3:89734003-89734022 | MS.gene80911:CDS | 55.0% |
| !! | TCGGGGAAGAAGGTATCCGA+GGG | + | chr7.3:89734477-89734496 | MS.gene80911:CDS | 55.0% |
| !! | TTCGGGGAAGAAGGTATCCG+AGG | + | chr7.3:89734476-89734495 | MS.gene80911:CDS | 55.0% |
| CGTCCCTGAAGGCAATCCAC+TGG | - | chr7.3:89735474-89735493 | None:intergenic | 60.0% | |
| TAAAAGTGGGACCGCAGGCG+AGG | + | chr7.3:89735337-89735356 | MS.gene80911:CDS | 60.0% | |
| ACCGCAGGCGAGGATCCACC+TGG | + | chr7.3:89735347-89735366 | MS.gene80911:CDS | 70.0% | |
| CCCAGGTGGATCCTCGCCTG+CGG | - | chr7.3:89735351-89735370 | None:intergenic | 70.0% | |
| CCGCAGGCGAGGATCCACCT+GGG | + | chr7.3:89735348-89735367 | MS.gene80911:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 89733184 | 89735934 | 89733184 | ID=MS.gene80911 |
| chr7.3 | mRNA | 89733184 | 89735934 | 89733184 | ID=MS.gene80911.t1;Parent=MS.gene80911 |
| chr7.3 | exon | 89733184 | 89735934 | 89733184 | ID=MS.gene80911.t1.exon1;Parent=MS.gene80911.t1 |
| chr7.3 | CDS | 89733184 | 89735934 | 89733184 | ID=cds.MS.gene80911.t1;Parent=MS.gene80911.t1 |
| Gene Sequence |
| Protein sequence |
