Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81279.t1 | XP_003617886.2 | 94.1 | 304 | 17 | 1 | 1 | 303 | 1 | 304 | 2.30E-161 | 578.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81279.t1 | Q5WVQ1 | 28.8 | 160 | 95 | 3 | 136 | 295 | 4 | 144 | 8.6e-08 | 59.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81279.t1 | G7K4S5 | 94.1 | 304 | 17 | 1 | 1 | 303 | 1 | 304 | 1.6e-161 | 578.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050330 | MS.gene81279 | -0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene81279 | 0.814504 | 1.49E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene81279 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene81279 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene81279 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene052376 | MS.gene81279 | 0.822608 | 2.16E-53 | -1.69E-46 |
| MS.gene052856 | MS.gene81279 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene052858 | MS.gene81279 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene81279 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene81279 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene055133 | MS.gene81279 | 0.802979 | 4.34E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene81279 | -0.813871 | 2.06E-51 | -1.69E-46 |
| MS.gene057057 | MS.gene81279 | 0.806689 | 7.28E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene81279 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene81279 | 0.832049 | 1.18E-55 | -1.69E-46 |
| MS.gene060476 | MS.gene81279 | 0.825068 | 5.73E-54 | -1.69E-46 |
| MS.gene060619 | MS.gene81279 | 0.815488 | 9.01E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81279.t1 | MTR_5g096560 | 94.079 | 304 | 17 | 1 | 1 | 303 | 1 | 304 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81279.t1 | AT3G13226 | 42.915 | 247 | 118 | 6 | 72 | 296 | 132 | 377 | 6.23e-60 | 196 |
Find 61 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATAAATGATGGGAAAAT+TGG | 0.155313 | 5.2:-80943654 | MS.gene81279:CDS |
| GGAGAAGAGAAGTCAATTAT+TGG | 0.244523 | 5.2:-80938622 | MS.gene81279:CDS |
| ATCACTGCCTCCACTGCATT+AGG | 0.286004 | 5.2:+80941170 | None:intergenic |
| TTAGTTCGTGTGTTGGTGTT+AGG | 0.315723 | 5.2:-80943752 | MS.gene81279:CDS |
| TCACTGCCTCCACTGCATTA+GGG | 0.318334 | 5.2:+80941171 | None:intergenic |
| TTAGGAACATTTGGAAGTTT+CGG | 0.323492 | 5.2:-80943800 | MS.gene81279:intron |
| GTATGAACTTCATCTGGATT+TGG | 0.326325 | 5.2:+80943600 | None:intergenic |
| CTTGATTTCCTTGTCTCCTT+CGG | 0.343399 | 5.2:+80938529 | None:intergenic |
| AAGGACAACAATGATTGTTC+TGG | 0.357621 | 5.2:-80938643 | MS.gene81279:CDS |
| ACCTTTGAACCACTGCTTTG+AGG | 0.360986 | 5.2:+80938561 | None:intergenic |
| GGTTGGAGATTCTTGTGAAC+AGG | 0.371729 | 5.2:-80942187 | MS.gene81279:CDS |
| CTAGATGGTCTTCGTCTACT+TGG | 0.373265 | 5.2:-80939110 | MS.gene81279:CDS |
| AGCCGATTGTTCAGCATCAT+TGG | 0.373844 | 5.2:+80942140 | None:intergenic |
| CATTGATCATCTTTATGTTC+AGG | 0.374786 | 5.2:-80938584 | MS.gene81279:CDS |
| TTCACCCTGCATGATGTGTT+AGG | 0.382312 | 5.2:+80943723 | None:intergenic |
| TCAGAGGGTTCATCAATGAT+AGG | 0.382601 | 5.2:-80939158 | MS.gene81279:intron |
| AAATTGAAATTAGGAACATT+TGG | 0.383207 | 5.2:-80943809 | MS.gene81279:intron |
| CAAAGCTACAATACTCCAAA+TGG | 0.386271 | 5.2:+80943694 | None:intergenic |
| CTGTCAAATTACTTGCATCT+AGG | 0.394839 | 5.2:-80942119 | MS.gene81279:intron |
| CAGGGTGAAAATTCCCCATT+TGG | 0.401072 | 5.2:-80943709 | MS.gene81279:CDS |
| AACTCAGTATGAACTTCATC+TGG | 0.406135 | 5.2:+80943594 | None:intergenic |
| CTTACCTGTTTGATCCGTCT+TGG | 0.409978 | 5.2:+80939084 | None:intergenic |
| AGATAAATGATGGGAAAATT+GGG | 0.425380 | 5.2:-80943653 | MS.gene81279:CDS |
| GATTCTAGGTTCTGAACAAA+TGG | 0.438649 | 5.2:-80942214 | MS.gene81279:intron |
| TCATAGTAAACAAACTAGAT+AGG | 0.439290 | 5.2:-80938456 | MS.gene81279:CDS |
| CTCTTTGATGATAGTGAAGA+AGG | 0.444371 | 5.2:-80943570 | MS.gene81279:intron |
| TAGATGGTCTTCGTCTACTT+GGG | 0.452942 | 5.2:-80939109 | MS.gene81279:CDS |
| AAAGCTACAATACTCCAAAT+GGG | 0.474481 | 5.2:+80943695 | None:intergenic |
| TACCAATGATGCTGAACAAT+CGG | 0.477064 | 5.2:-80942142 | MS.gene81279:CDS |
| AATCATATTCTCAATCTAGA+TGG | 0.477303 | 5.2:-80939125 | MS.gene81279:CDS |
| AGTTAGCTACATACTGTCTC+TGG | 0.482116 | 5.2:+80941138 | None:intergenic |
| AGTGTAATCAAGATAAATGA+TGG | 0.484873 | 5.2:-80943663 | MS.gene81279:CDS |
| GGGGCCAAGACGGATCAAAC+AGG | 0.494987 | 5.2:-80939088 | MS.gene81279:intron |
| CACTGCCTCCACTGCATTAG+GGG | 0.499282 | 5.2:+80941172 | None:intergenic |
| CGAAGGAGACAAGGAAATCA+AGG | 0.508111 | 5.2:-80938528 | MS.gene81279:CDS |
| GCCTCAAAGCAGTGGTTCAA+AGG | 0.522041 | 5.2:-80938562 | MS.gene81279:CDS |
| AGAGACTTTAGTTCGTGTGT+TGG | 0.535118 | 5.2:-80943759 | MS.gene81279:CDS |
| AGAAGTTTAGCGGGAAACAT+TGG | 0.537917 | 5.2:-80944433 | MS.gene81279:CDS |
| AGATGGTCTTCGTCTACTTG+GGG | 0.547146 | 5.2:-80939108 | MS.gene81279:CDS |
| CTGAACATAAAGATGATCAA+TGG | 0.547886 | 5.2:+80938585 | None:intergenic |
| AGGTTCTGAACAAATGGAAG+AGG | 0.550123 | 5.2:-80942208 | MS.gene81279:CDS |
| TCTGAACAAATGGAAGAGGT+TGG | 0.556064 | 5.2:-80942204 | MS.gene81279:CDS |
| TGGCAGGCACTGTTCAAGAA+AGG | 0.558497 | 5.2:-80938709 | MS.gene81279:intron |
| AACATGGCAAGAAGTTTAGC+GGG | 0.560092 | 5.2:-80944442 | MS.gene81279:CDS |
| ACATTCCTAACACATCATGC+AGG | 0.560654 | 5.2:-80943728 | MS.gene81279:CDS |
| GGAAATCAAGGATTATTCGA+TGG | 0.569098 | 5.2:-80938516 | MS.gene81279:CDS |
| ATGTTCAGGCCTCAAAGCAG+TGG | 0.582693 | 5.2:-80938570 | MS.gene81279:CDS |
| GAGTATTGTAGCTTTGCTGA+TGG | 0.583649 | 5.2:-80943687 | MS.gene81279:CDS |
| ATTCGATGGCTTCAATATCG+TGG | 0.583859 | 5.2:-80938502 | MS.gene81279:CDS |
| TTCGGATTGAATGCTTCAAG+AGG | 0.601314 | 5.2:-80943782 | MS.gene81279:CDS |
| GTCCCAGTTGTGCACTATGG+AGG | 0.603930 | 5.2:+80938421 | None:intergenic |
| GAACATGGCAAGAAGTTTAG+CGG | 0.604379 | 5.2:-80944443 | MS.gene81279:CDS |
| AGAATGTTCCGAAGGAGACA+AGG | 0.604609 | 5.2:-80938537 | MS.gene81279:CDS |
| GTGTAATCAAGATAAATGAT+GGG | 0.609791 | 5.2:-80943662 | MS.gene81279:CDS |
| GAAATTCTCCCCTAATGCAG+TGG | 0.612114 | 5.2:-80941180 | MS.gene81279:CDS |
| ATTCTCCCCTAATGCAGTGG+AGG | 0.636527 | 5.2:-80941177 | MS.gene81279:CDS |
| CAAAGGTCAGAATGTTCCGA+AGG | 0.644420 | 5.2:-80938545 | MS.gene81279:CDS |
| GATGGTCTTCGTCTACTTGG+GGG | 0.660488 | 5.2:-80939107 | MS.gene81279:CDS |
| CATTCCTAACACATCATGCA+GGG | 0.662603 | 5.2:-80943727 | MS.gene81279:CDS |
| AAGCTACAATACTCCAAATG+GGG | 0.674118 | 5.2:+80943696 | None:intergenic |
| TTTGGAGAAGTTTCACAATG+CGG | 0.677880 | 5.2:+80943618 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTGAAATTGAAATT+AGG | - | chr5.2:80939062-80939081 | MS.gene81279:intron | 10.0% |
| !!! | TAAAATTTTAAAAGGTAAAT+TGG | + | chr5.2:80940475-80940494 | None:intergenic | 10.0% |
| !! | AATATTCAACATGATTATAA+GGG | + | chr5.2:80942029-80942048 | None:intergenic | 15.0% |
| !! | AATTTCAGAAAAAAATACAA+TGG | + | chr5.2:80941126-80941145 | None:intergenic | 15.0% |
| !! | AGACAATAATACTATATAAA+CGG | - | chr5.2:80942856-80942875 | MS.gene81279:intron | 15.0% |
| !! | TCTAGAAAATTATTAAGATT+TGG | + | chr5.2:80942433-80942452 | None:intergenic | 15.0% |
| !!! | AAAAATTTGATAATGTTATG+GGG | - | chr5.2:80940297-80940316 | MS.gene81279:intron | 15.0% |
| !!! | AAAATACAATGGATTTTTTA+AGG | + | chr5.2:80941115-80941134 | None:intergenic | 15.0% |
| !!! | ACAAAAATTTGATAATGTTA+TGG | - | chr5.2:80940295-80940314 | MS.gene81279:intron | 15.0% |
| !!! | ACTAGATATATATCTAATTT+TGG | - | chr5.2:80942884-80942903 | MS.gene81279:intron | 15.0% |
| !!! | ATTCTTATATTTGTTGAAAA+AGG | + | chr5.2:80942646-80942665 | None:intergenic | 15.0% |
| !!! | ATTTTAACTTATGTAGTATT+AGG | - | chr5.2:80943918-80943937 | MS.gene81279:intron | 15.0% |
| !!! | CAAAAATTTGATAATGTTAT+GGG | - | chr5.2:80940296-80940315 | MS.gene81279:intron | 15.0% |
| !!! | CATAATTTTTTTGAGATAAA+TGG | + | chr5.2:80938543-80938562 | None:intergenic | 15.0% |
| !!! | CTAGATATATATCTAATTTT+GGG | - | chr5.2:80942885-80942904 | MS.gene81279:intron | 15.0% |
| !!! | CTTAATGCTAAAATTTTAAA+AGG | + | chr5.2:80940483-80940502 | None:intergenic | 15.0% |
| !!! | GTTACATTATTTATTTTACT+GGG | + | chr5.2:80941826-80941845 | None:intergenic | 15.0% |
| !!! | TACAAATAATGCTTATTTTT+AGG | + | chr5.2:80942695-80942714 | None:intergenic | 15.0% |
| !!! | TGAATTTTAATACATTCTTT+GGG | - | chr5.2:80943664-80943683 | MS.gene81279:CDS | 15.0% |
| !!! | TGTTACATTATTTATTTTAC+TGG | + | chr5.2:80941827-80941846 | None:intergenic | 15.0% |
| !!! | TTTCAGCTTTTAATTAATAA+CGG | - | chr5.2:80938739-80938758 | MS.gene81279:intron | 15.0% |
| !! | AAAGATATACAAAGAAATGT+AGG | + | chr5.2:80941493-80941512 | None:intergenic | 20.0% |
| !! | AAATAAGTTGTTTATCCAAA+CGG | - | chr5.2:80938964-80938983 | MS.gene81279:intron | 20.0% |
| !! | AAATTGAAATTAGGAACATT+TGG | - | chr5.2:80939071-80939090 | MS.gene81279:intron | 20.0% |
| !! | AAGCATCAAATTTAATTACA+AGG | + | chr5.2:80939753-80939772 | None:intergenic | 20.0% |
| !! | AATTTAATTCTTGACTGATT+TGG | - | chr5.2:80943538-80943557 | MS.gene81279:intron | 20.0% |
| !! | ATAAAATAGAATGATGTCAT+AGG | + | chr5.2:80939458-80939477 | None:intergenic | 20.0% |
| !! | ATATAAAATAGTAGTTACCT+GGG | + | chr5.2:80938516-80938535 | None:intergenic | 20.0% |
| !! | ATATTCAACATGATTATAAG+GGG | + | chr5.2:80942028-80942047 | None:intergenic | 20.0% |
| !! | ATATTCATACATGATCAAAT+TGG | + | chr5.2:80943472-80943491 | None:intergenic | 20.0% |
| !! | ATCCTAGATATTAATGATTA+AGG | + | chr5.2:80940400-80940419 | None:intergenic | 20.0% |
| !! | ATGTAAACTTTCGAAAAATT+TGG | + | chr5.2:80943446-80943465 | None:intergenic | 20.0% |
| !! | ATTCAACTTATCAAATACAA+TGG | + | chr5.2:80940260-80940279 | None:intergenic | 20.0% |
| !! | GAATATTCAACATGATTATA+AGG | + | chr5.2:80942030-80942049 | None:intergenic | 20.0% |
| !! | GACAAAAACATTACAAAATA+TGG | + | chr5.2:80938992-80939011 | None:intergenic | 20.0% |
| !! | GACAATAATACTATATAAAC+GGG | - | chr5.2:80942857-80942876 | MS.gene81279:intron | 20.0% |
| !! | TAACTTCATATCAAAATTGT+TGG | - | chr5.2:80941760-80941779 | MS.gene81279:intron | 20.0% |
| !! | TACATTTCTTTGTATATCTT+TGG | - | chr5.2:80941492-80941511 | MS.gene81279:intron | 20.0% |
| !! | TATATAAAATAGTAGTTACC+TGG | + | chr5.2:80938517-80938536 | None:intergenic | 20.0% |
| !! | TATCAAAACATTTAATTACC+TGG | - | chr5.2:80941266-80941285 | MS.gene81279:intron | 20.0% |
| !! | TGATAATAATAGCAAGTATA+TGG | + | chr5.2:80944114-80944133 | None:intergenic | 20.0% |
| !! | TGGAATGAATTATAACTATT+TGG | - | chr5.2:80941206-80941225 | MS.gene81279:CDS | 20.0% |
| !! | TTAAAAATACAATACACATG+TGG | - | chr5.2:80942908-80942927 | MS.gene81279:intron | 20.0% |
| !! | TTAATCATTAATATCTAGGA+TGG | - | chr5.2:80940399-80940418 | MS.gene81279:intron | 20.0% |
| !! | TTGTAATTAAATTTGATGCT+TGG | - | chr5.2:80939752-80939771 | MS.gene81279:intron | 20.0% |
| !!! | AAAATTTGATAATGTTATGG+GGG | - | chr5.2:80940298-80940317 | MS.gene81279:intron | 20.0% |
| !!! | AAATATTGTTAGAGTTTGTT+AGG | + | chr5.2:80941976-80941995 | None:intergenic | 20.0% |
| !!! | ACCTTTATAAGATTTTTAAC+TGG | - | chr5.2:80943211-80943230 | MS.gene81279:intron | 20.0% |
| !!! | ATCCAGAAATTTTAATAAGT+GGG | - | chr5.2:80942270-80942289 | MS.gene81279:intron | 20.0% |
| !!! | CCTTTATAAGATTTTTAACT+GGG | - | chr5.2:80943212-80943231 | MS.gene81279:intron | 20.0% |
| !!! | CTGAATTTTAATACATTCTT+TGG | - | chr5.2:80943663-80943682 | MS.gene81279:CDS | 20.0% |
| !!! | TTATTTGAACAACCATTTTT+GGG | + | chr5.2:80941534-80941553 | None:intergenic | 20.0% |
| !!! | TTTTGTATATGTATAAAGAC+TGG | - | chr5.2:80940177-80940196 | MS.gene81279:intron | 20.0% |
| ! | AAATAACCGACCTATAATAA+AGG | - | chr5.2:80939574-80939593 | MS.gene81279:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+GGG | - | chr5.2:80938965-80938984 | MS.gene81279:intron | 25.0% |
| ! | AATCATATTCTCAATCTAGA+TGG | - | chr5.2:80943755-80943774 | MS.gene81279:CDS | 25.0% |
| ! | AATCATGACCAAAAACATTA+TGG | + | chr5.2:80939021-80939040 | None:intergenic | 25.0% |
| ! | AATTGGTTGCATTGTAATAT+GGG | - | chr5.2:80938781-80938800 | MS.gene81279:intron | 25.0% |
| ! | ACAAACTCTAACAATATTTC+TGG | - | chr5.2:80941977-80941996 | MS.gene81279:intron | 25.0% |
| ! | ACATTAATACTACCAATTCA+TGG | - | chr5.2:80939694-80939713 | MS.gene81279:intron | 25.0% |
| ! | ACTTCATATTCTCTTCAATT+TGG | + | chr5.2:80940859-80940878 | None:intergenic | 25.0% |
| ! | AGAATAGGGAAAAAAAGAAA+TGG | - | chr5.2:80943315-80943334 | MS.gene81279:intron | 25.0% |
| ! | AGTGTAATCAAGATAAATGA+TGG | - | chr5.2:80939217-80939236 | MS.gene81279:intron | 25.0% |
| ! | ATATTACAATGCAACCAATT+GGG | + | chr5.2:80938781-80938800 | None:intergenic | 25.0% |
| ! | ATTAATACTACCAATTCATG+GGG | - | chr5.2:80939696-80939715 | MS.gene81279:intron | 25.0% |
| ! | ATTGGAAAAACAAATGAACA+TGG | + | chr5.2:80940457-80940476 | None:intergenic | 25.0% |
| ! | CAACGTGTAAAAAATATTAG+AGG | + | chr5.2:80941561-80941580 | None:intergenic | 25.0% |
| ! | CATTAATACTACCAATTCAT+GGG | - | chr5.2:80939695-80939714 | MS.gene81279:intron | 25.0% |
| ! | CCCAGTTAAAAATCTTATAA+AGG | + | chr5.2:80943215-80943234 | None:intergenic | 25.0% |
| ! | CTCCTTAATCATTAATATCT+AGG | - | chr5.2:80940395-80940414 | MS.gene81279:intron | 25.0% |
| ! | CTCTAGTATTGTAAAGTAAT+AGG | + | chr5.2:80944031-80944050 | None:intergenic | 25.0% |
| ! | CTGAAATTTCAACTTGATTT+GGG | - | chr5.2:80941138-80941157 | MS.gene81279:intron | 25.0% |
| ! | GAAGTTATAACTTATCTATG+TGG | - | chr5.2:80939855-80939874 | MS.gene81279:intron | 25.0% |
| ! | GAATAGAACATGATAAAAAC+TGG | + | chr5.2:80942173-80942192 | None:intergenic | 25.0% |
| ! | GAGAACATTCTCTAAATAAA+TGG | + | chr5.2:80940209-80940228 | None:intergenic | 25.0% |
| ! | GCTTGTAAGTTATTAACAAA+GGG | - | chr5.2:80941299-80941318 | MS.gene81279:intron | 25.0% |
| ! | GGAAAAACAGTATTATCTTA+TGG | - | chr5.2:80940335-80940354 | MS.gene81279:intron | 25.0% |
| ! | GTGTAATCAAGATAAATGAT+GGG | - | chr5.2:80939218-80939237 | MS.gene81279:intron | 25.0% |
| ! | TATAAAATAGTAGTTACCTG+GGG | + | chr5.2:80938515-80938534 | None:intergenic | 25.0% |
| ! | TCATAGTAAACAAACTAGAT+AGG | - | chr5.2:80944424-80944443 | MS.gene81279:CDS | 25.0% |
| ! | TCGGTTAATCATAGTTTAAA+TGG | + | chr5.2:80940137-80940156 | None:intergenic | 25.0% |
| ! | TGCTTGTAAGTTATTAACAA+AGG | - | chr5.2:80941298-80941317 | MS.gene81279:intron | 25.0% |
| ! | TTCAACTATAGCAAACAAAT+GGG | + | chr5.2:80938567-80938586 | None:intergenic | 25.0% |
| ! | TTCTAATTTAGATACCCAAT+TGG | - | chr5.2:80938640-80938659 | MS.gene81279:CDS | 25.0% |
| ! | TTTCAACTATAGCAAACAAA+TGG | + | chr5.2:80938568-80938587 | None:intergenic | 25.0% |
| !! | AAACACGGATTTTATCATTT+TGG | - | chr5.2:80939640-80939659 | MS.gene81279:intron | 25.0% |
| !! | AACACGGATTTTATCATTTT+GGG | - | chr5.2:80939641-80939660 | MS.gene81279:intron | 25.0% |
| !! | AAGATAAATGATGGGAAAAT+TGG | - | chr5.2:80939226-80939245 | MS.gene81279:intron | 25.0% |
| !! | AATCAAACTTTTCAGTGATT+TGG | + | chr5.2:80938593-80938612 | None:intergenic | 25.0% |
| !! | AGATAAATGATGGGAAAATT+GGG | - | chr5.2:80939227-80939246 | MS.gene81279:intron | 25.0% |
| !! | ATCAGAACAACTTTATTTCT+TGG | + | chr5.2:80940632-80940651 | None:intergenic | 25.0% |
| !! | GATTTTTCTTGCACTAAATT+AGG | + | chr5.2:80940892-80940911 | None:intergenic | 25.0% |
| !! | GTTATTTGAACAACCATTTT+TGG | + | chr5.2:80941535-80941554 | None:intergenic | 25.0% |
| !! | GTTCTAATAATGGTAATGTT+AGG | + | chr5.2:80942129-80942148 | None:intergenic | 25.0% |
| !! | TCATGATTCCATAATGTTTT+TGG | - | chr5.2:80939010-80939029 | MS.gene81279:intron | 25.0% |
| !! | TCTGAAATTTCAACTTGATT+TGG | - | chr5.2:80941137-80941156 | MS.gene81279:intron | 25.0% |
| !! | TGTTTTCAAAACTGAATGAA+TGG | + | chr5.2:80939625-80939644 | None:intergenic | 25.0% |
| !!! | AGATATTTGTTTTATCTCAC+GGG | - | chr5.2:80939987-80940006 | MS.gene81279:intron | 25.0% |
| !!! | CTCTAATATTTTTTACACGT+TGG | - | chr5.2:80941559-80941578 | MS.gene81279:intron | 25.0% |
| !!! | GAGATATTTGTTTTATCTCA+CGG | - | chr5.2:80939986-80940005 | MS.gene81279:intron | 25.0% |
| !!! | GATCCAGAAATTTTAATAAG+TGG | - | chr5.2:80942269-80942288 | MS.gene81279:intron | 25.0% |
| !!! | GCTCTAGAGAAAATTAATAA+TGG | + | chr5.2:80940365-80940384 | None:intergenic | 25.0% |
| !!! | TAATACATTCTTTGGGATTA+TGG | - | chr5.2:80943671-80943690 | MS.gene81279:CDS | 25.0% |
| !!! | TAGTTCGGTTTTTAAAACAT+TGG | + | chr5.2:80939481-80939500 | None:intergenic | 25.0% |
| !!! | TCAGCTAATATTTTGAGAAA+TGG | - | chr5.2:80941345-80941364 | MS.gene81279:intron | 25.0% |
| !!! | TCCAGAAATTTTAATAAGTG+GGG | - | chr5.2:80942271-80942290 | MS.gene81279:intron | 25.0% |
| !!! | TTACCATTTTAACTTTGATG+CGG | - | chr5.2:80943146-80943165 | MS.gene81279:intron | 25.0% |
| !!! | TTCATTCAGTTTTGAAAACA+CGG | - | chr5.2:80939625-80939644 | MS.gene81279:intron | 25.0% |
| AAAAGAAATAACAAACCCGT+GGG | + | chr5.2:80942491-80942510 | None:intergenic | 30.0% | |
| AAAATACAATACACATGTGG+AGG | - | chr5.2:80942911-80942930 | MS.gene81279:intron | 30.0% | |
| AAAGCTACAATACTCCAAAT+GGG | + | chr5.2:80939188-80939207 | None:intergenic | 30.0% | |
| AACATATTCATGACTACACA+GGG | + | chr5.2:80943119-80943138 | None:intergenic | 30.0% | |
| AACCTAAAAGATAAACTGAC+AGG | + | chr5.2:80942576-80942595 | None:intergenic | 30.0% | |
| ACAGATCAAGTGTATAAACT+AGG | + | chr5.2:80939940-80939959 | None:intergenic | 30.0% | |
| ACCCCACTTATTAAAATTTC+TGG | + | chr5.2:80942275-80942294 | None:intergenic | 30.0% | |
| ACGGAAAAAGAAAAGATAAC+CGG | - | chr5.2:80941899-80941918 | MS.gene81279:intron | 30.0% | |
| AGAATAGTAGCTAGATAATC+AGG | - | chr5.2:80943052-80943071 | MS.gene81279:intron | 30.0% | |
| AGCTAACTTAAAATCAGTTG+CGG | - | chr5.2:80943019-80943038 | MS.gene81279:intron | 30.0% | |
| AGTTTATACACTTGATCTGT+AGG | - | chr5.2:80939940-80939959 | MS.gene81279:intron | 30.0% | |
| ATAAGTTGTTTATCCAAACG+GGG | - | chr5.2:80938966-80938985 | MS.gene81279:intron | 30.0% | |
| ATAATGTTATGGGGGAAATT+GGG | - | chr5.2:80940306-80940325 | MS.gene81279:intron | 30.0% | |
| ATACAAAGAAATGTAGGTAG+TGG | + | chr5.2:80941487-80941506 | None:intergenic | 30.0% | |
| ATCTATGTGGTGAGTTTATT+AGG | - | chr5.2:80939868-80939887 | MS.gene81279:intron | 30.0% | |
| ATTAAATTTGATGCTTGGCA+CGG | - | chr5.2:80939757-80939776 | MS.gene81279:intron | 30.0% | |
| ATTGGAAAGCAAAAAGTAAG+AGG | + | chr5.2:80943848-80943867 | None:intergenic | 30.0% | |
| CAATTGGTTGCATTGTAATA+TGG | - | chr5.2:80938780-80938799 | MS.gene81279:intron | 30.0% | |
| CAGATCAAGTGTATAAACTA+GGG | + | chr5.2:80939939-80939958 | None:intergenic | 30.0% | |
| CATATTACAATGCAACCAAT+TGG | + | chr5.2:80938782-80938801 | None:intergenic | 30.0% | |
| CATTGATCATCTTTATGTTC+AGG | - | chr5.2:80944296-80944315 | MS.gene81279:intron | 30.0% | |
| CCAAACTTGGATTAACTTAA+TGG | + | chr5.2:80939435-80939454 | None:intergenic | 30.0% | |
| CCATTAAGTTAATCCAAGTT+TGG | - | chr5.2:80939432-80939451 | MS.gene81279:intron | 30.0% | |
| CTATCAGATACATTTGGAAA+TGG | + | chr5.2:80941801-80941820 | None:intergenic | 30.0% | |
| CTATTTAACAGTTTAGCACT+CGG | + | chr5.2:80940156-80940175 | None:intergenic | 30.0% | |
| CTGAACATAAAGATGATCAA+TGG | + | chr5.2:80944298-80944317 | None:intergenic | 30.0% | |
| GAAGTTAAATGAGCTAAAAC+AGG | + | chr5.2:80940519-80940538 | None:intergenic | 30.0% | |
| GGAAAATAGTCAACTTTCTA+GGG | + | chr5.2:80940116-80940135 | None:intergenic | 30.0% | |
| TCTGCAATAACAGATACAAA+TGG | - | chr5.2:80942225-80942244 | MS.gene81279:intron | 30.0% | |
| TGGAAAATAGTCAACTTTCT+AGG | + | chr5.2:80940117-80940136 | None:intergenic | 30.0% | |
| TTACAAGCAATAACAAATCC+AGG | + | chr5.2:80941287-80941306 | None:intergenic | 30.0% | |
| TTAGGAACATTTGGAAGTTT+CGG | - | chr5.2:80939080-80939099 | MS.gene81279:intron | 30.0% | |
| TTATCTAGCTACTATTCTCA+TGG | + | chr5.2:80943050-80943069 | None:intergenic | 30.0% | |
| TTCAAATTTAGCTACCCAAT+TGG | - | chr5.2:80938764-80938783 | MS.gene81279:intron | 30.0% | |
| TTGCAGATCACTATATCAAA+GGG | - | chr5.2:80941173-80941192 | MS.gene81279:CDS | 30.0% | |
| TTGCATTGAATGTATATGCA+CGG | + | chr5.2:80941593-80941612 | None:intergenic | 30.0% | |
| TTTGCAGATCACTATATCAA+AGG | - | chr5.2:80941172-80941191 | MS.gene81279:CDS | 30.0% | |
| ! | AACCTGTCAGTTTATCTTTT+AGG | - | chr5.2:80942571-80942590 | MS.gene81279:intron | 30.0% |
| ! | AATAATGGTAATGTTAGGAG+CGG | + | chr5.2:80942124-80942143 | None:intergenic | 30.0% |
| ! | ACACGGATTTTATCATTTTG+GGG | - | chr5.2:80939642-80939661 | MS.gene81279:intron | 30.0% |
| ! | GCAAGCAAAAGTTCTAATAA+TGG | + | chr5.2:80942139-80942158 | None:intergenic | 30.0% |
| ! | GGAGATATGCTTATAGTTTT+TGG | + | chr5.2:80939918-80939937 | None:intergenic | 30.0% |
| ! | GTTCTGATCATCTTAATTTG+TGG | - | chr5.2:80940644-80940663 | MS.gene81279:intron | 30.0% |
| ! | TTACAATACTAGAGAGCATA+TGG | - | chr5.2:80944037-80944056 | MS.gene81279:intron | 30.0% |
| ! | TTATGGCTGACTATACATTT+TGG | - | chr5.2:80940063-80940082 | MS.gene81279:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5.2:80938866-80938885 | MS.gene81279:intron | 30.0% |
| !! | ATTTTATCCCTTTGTTTCAG+AGG | - | chr5.2:80943706-80943725 | MS.gene81279:CDS | 30.0% |
| !! | CATCTTAATTTGTGGATTCT+AGG | - | chr5.2:80940652-80940671 | MS.gene81279:intron | 30.0% |
| !! | GATTTTAAGTCATCTTCATC+AGG | + | chr5.2:80942981-80943000 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5.2:80938867-80938886 | MS.gene81279:intron | 30.0% |
| !! | TTTTATCCCTTTGTTTCAGA+GGG | - | chr5.2:80943707-80943726 | MS.gene81279:CDS | 30.0% |
| !!! | AATTTTCTCTAGAGCTTGAT+AGG | - | chr5.2:80940370-80940389 | MS.gene81279:intron | 30.0% |
| !!! | ATTTTTTACACGTTGGACTT+GGG | - | chr5.2:80941566-80941585 | MS.gene81279:intron | 30.0% |
| !!! | TATTTTTTACACGTTGGACT+TGG | - | chr5.2:80941565-80941584 | MS.gene81279:intron | 30.0% |
| !!! | TTATAGGTCGGTTATTTTTG+CGG | + | chr5.2:80939571-80939590 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTATTTCAGCCCA+CGG | - | chr5.2:80942472-80942491 | MS.gene81279:intron | 30.0% |
| AAAGTAAGAGGATGAACAGA+AGG | + | chr5.2:80943836-80943855 | None:intergenic | 35.0% | |
| AACCGACCTATAATAAAGGT+CGG | - | chr5.2:80939578-80939597 | MS.gene81279:intron | 35.0% | |
| AACCGACCTTTATTATAGGT+CGG | + | chr5.2:80939583-80939602 | None:intergenic | 35.0% | |
| AACTAAAGACAGCAAAGTGT+TGG | + | chr5.2:80943877-80943896 | None:intergenic | 35.0% | |
| AACTCAGTATGAACTTCATC+TGG | + | chr5.2:80939289-80939308 | None:intergenic | 35.0% | |
| AACTGAATGAATGGATCAAC+CGG | + | chr5.2:80939616-80939635 | None:intergenic | 35.0% | |
| AAGCTACAATACTCCAAATG+GGG | + | chr5.2:80939187-80939206 | None:intergenic | 35.0% | |
| AAGGACAACAATGATTGTTC+TGG | - | chr5.2:80944237-80944256 | MS.gene81279:intron | 35.0% | |
| AAGTAAGAGGATGAACAGAA+GGG | + | chr5.2:80943835-80943854 | None:intergenic | 35.0% | |
| AGACACACATAGATAACCAT+CGG | - | chr5.2:80940032-80940051 | MS.gene81279:intron | 35.0% | |
| ATGTTTAGACAGTGGAGAAT+AGG | - | chr5.2:80943300-80943319 | MS.gene81279:intron | 35.0% | |
| CAAAAGAAATAACAAACCCG+TGG | + | chr5.2:80942492-80942511 | None:intergenic | 35.0% | |
| CAAAGCTACAATACTCCAAA+TGG | + | chr5.2:80939189-80939208 | None:intergenic | 35.0% | |
| CAACCGCATCAAAGTTAAAA+TGG | + | chr5.2:80943152-80943171 | None:intergenic | 35.0% | |
| CCAATTGGTTGCATTGTAAT+GGG | - | chr5.2:80938655-80938674 | MS.gene81279:CDS | 35.0% | |
| CCATTACAATGCAACCAATT+GGG | + | chr5.2:80938657-80938676 | None:intergenic | 35.0% | |
| CTAACTTAAAATCAGTTGCG+GGG | - | chr5.2:80943021-80943040 | MS.gene81279:intron | 35.0% | |
| CTGTCAAATTACTTGCATCT+AGG | - | chr5.2:80940761-80940780 | MS.gene81279:intron | 35.0% | |
| CTTGAACCGACCTTTATTAT+AGG | + | chr5.2:80939587-80939606 | None:intergenic | 35.0% | |
| GAACATATTCATGACTACAC+AGG | + | chr5.2:80943120-80943139 | None:intergenic | 35.0% | |
| GATAATGTTATGGGGGAAAT+TGG | - | chr5.2:80940305-80940324 | MS.gene81279:intron | 35.0% | |
| GATGTAACATGTTTAGACAG+TGG | - | chr5.2:80943292-80943311 | MS.gene81279:intron | 35.0% | |
| GCATCACTTGTTCTTAACAT+CGG | - | chr5.2:80940953-80940972 | MS.gene81279:intron | 35.0% | |
| GCTAACTTAAAATCAGTTGC+GGG | - | chr5.2:80943020-80943039 | MS.gene81279:intron | 35.0% | |
| GGAAATCAAGGATTATTCGA+TGG | - | chr5.2:80944364-80944383 | MS.gene81279:intron | 35.0% | |
| GGAGAAGAGAAGTCAATTAT+TGG | - | chr5.2:80944258-80944277 | MS.gene81279:intron | 35.0% | |
| GTATGAACTTCATCTGGATT+TGG | + | chr5.2:80939283-80939302 | None:intergenic | 35.0% | |
| TACCAATGATGCTGAACAAT+CGG | - | chr5.2:80940738-80940757 | MS.gene81279:intron | 35.0% | |
| TATCAAAGGGTGAGATAATG+TGG | - | chr5.2:80941186-80941205 | MS.gene81279:CDS | 35.0% | |
| TCCATAAGTTGTCCCAAAAA+TGG | - | chr5.2:80941519-80941538 | MS.gene81279:intron | 35.0% | |
| TCCTATTCAGCCCATTTATT+AGG | - | chr5.2:80942086-80942105 | MS.gene81279:intron | 35.0% | |
| TCCTCTCTTTCACACAAAAA+CGG | + | chr5.2:80943270-80943289 | None:intergenic | 35.0% | |
| TCTCACAAAACTTATGAGAG+TGG | + | chr5.2:80938861-80938880 | None:intergenic | 35.0% | |
| TGGACCTATGCCTAATAAAT+GGG | + | chr5.2:80942099-80942118 | None:intergenic | 35.0% | |
| TGGGTTCTATCAGATACATT+TGG | + | chr5.2:80941807-80941826 | None:intergenic | 35.0% | |
| TGTTTAGACAGTGGAGAATA+GGG | - | chr5.2:80943301-80943320 | MS.gene81279:intron | 35.0% | |
| TTAAATTTGATGCTTGGCAC+GGG | - | chr5.2:80939758-80939777 | MS.gene81279:intron | 35.0% | |
| TTCAACATGATTATAAGGGG+TGG | + | chr5.2:80942025-80942044 | None:intergenic | 35.0% | |
| TTGGACCTATGCCTAATAAA+TGG | + | chr5.2:80942100-80942119 | None:intergenic | 35.0% | |
| TTTGGAGAAGTTTCACAATG+CGG | + | chr5.2:80939265-80939284 | None:intergenic | 35.0% | |
| ! | AATAGTCAACTTTCTAGGGA+TGG | + | chr5.2:80940112-80940131 | None:intergenic | 35.0% |
| ! | AGCAGTTGAAGTGGTTTTTA+AGG | - | chr5.2:80944218-80944237 | MS.gene81279:intron | 35.0% |
| ! | ATAATGGTAATGTTAGGAGC+GGG | + | chr5.2:80942123-80942142 | None:intergenic | 35.0% |
| ! | CATACTGGTACTTTGGTAAT+TGG | + | chr5.2:80939827-80939846 | None:intergenic | 35.0% |
| ! | CTATAATAAAGGTCGGTTCA+AGG | - | chr5.2:80939585-80939604 | MS.gene81279:intron | 35.0% |
| ! | CTCTTTGATGATAGTGAAGA+AGG | - | chr5.2:80939310-80939329 | MS.gene81279:intron | 35.0% |
| ! | GTCACATTTCTGAAGAAAAC+TGG | - | chr5.2:80941017-80941036 | MS.gene81279:intron | 35.0% |
| ! | TACTAGAGAGCATATGGATA+AGG | - | chr5.2:80944043-80944062 | MS.gene81279:intron | 35.0% |
| ! | TGCATTGTAATATGGGTTGA+TGG | - | chr5.2:80938788-80938807 | MS.gene81279:intron | 35.0% |
| ! | TTCTTTTCAAACTGCAGAGA+AGG | + | chr5.2:80943568-80943587 | None:intergenic | 35.0% |
| ! | TTTTTGTGTGAAAGAGAGGA+TGG | - | chr5.2:80943270-80943289 | MS.gene81279:intron | 35.0% |
| !! | GATTCTAGGTTCTGAACAAA+TGG | - | chr5.2:80940666-80940685 | MS.gene81279:intron | 35.0% |
| !! | GTGATGGACTTTAATTCTTG+TGG | - | chr5.2:80944151-80944170 | MS.gene81279:intron | 35.0% |
| !!! | ACCATTTTTGGGACAACTTA+TGG | + | chr5.2:80941523-80941542 | None:intergenic | 35.0% |
| !!! | GCTTTTAGTTCGCTTATTTG+AGG | - | chr5.2:80938831-80938850 | MS.gene81279:intron | 35.0% |
| !!! | TTCAATATCGTGGTTTTGAC+TGG | - | chr5.2:80944388-80944407 | MS.gene81279:CDS | 35.0% |
| !!! | TTTGTTTTATTTCAGCCCAC+GGG | - | chr5.2:80942473-80942492 | MS.gene81279:intron | 35.0% |
| AAAAGTAGATGCACACTGCT+AGG | + | chr5.2:80943986-80944005 | None:intergenic | 40.0% | |
| AACATGGCAAGAAGTTTAGC+GGG | - | chr5.2:80938438-80938457 | MS.gene81279:CDS | 40.0% | |
| AACCATCGGAGCTTACTTTA+TGG | - | chr5.2:80940046-80940065 | MS.gene81279:intron | 40.0% | |
| ACATTCCTAACACATCATGC+AGG | - | chr5.2:80939152-80939171 | MS.gene81279:CDS | 40.0% | |
| ACTTATGCTTCACTTCACAG+AGG | - | chr5.2:80939667-80939686 | MS.gene81279:intron | 40.0% | |
| ACTTTCTCTCTCTATTGCTC+TGG | - | chr5.2:80941453-80941472 | MS.gene81279:intron | 40.0% | |
| AGAACATTATGCAGCCTAAG+AGG | - | chr5.2:80942522-80942541 | MS.gene81279:intron | 40.0% | |
| AGAAGTTTAGCGGGAAACAT+TGG | - | chr5.2:80938447-80938466 | MS.gene81279:CDS | 40.0% | |
| AGACTGTTTGGGAGAACTTA+TGG | - | chr5.2:80938878-80938897 | MS.gene81279:intron | 40.0% | |
| AGTCTAGATACCCCATGAAT+TGG | + | chr5.2:80939709-80939728 | None:intergenic | 40.0% | |
| AGTTAGCTACATACTGTCTC+TGG | + | chr5.2:80941745-80941764 | None:intergenic | 40.0% | |
| ATATTCATGACTACACAGGG+TGG | + | chr5.2:80943116-80943135 | None:intergenic | 40.0% | |
| ATGATGTCATAGGCCAAACT+TGG | + | chr5.2:80939448-80939467 | None:intergenic | 40.0% | |
| ATGTTACAAGTTCGAGACGA+GGG | + | chr5.2:80940793-80940812 | None:intergenic | 40.0% | |
| ATTCGATGGCTTCAATATCG+TGG | - | chr5.2:80944378-80944397 | MS.gene81279:intron | 40.0% | |
| CAACGAAAATATGCGTGTGA+TGG | - | chr5.2:80944135-80944154 | MS.gene81279:intron | 40.0% | |
| CAGAGGCTTCATTATAGTTG+AGG | - | chr5.2:80940233-80940252 | MS.gene81279:intron | 40.0% | |
| CATTCCTAACACATCATGCA+GGG | - | chr5.2:80939153-80939172 | MS.gene81279:CDS | 40.0% | |
| CCCAATTGGTTGCATTGTAA+TGG | - | chr5.2:80938654-80938673 | MS.gene81279:CDS | 40.0% | |
| CCCATTACAATGCAACCAAT+TGG | + | chr5.2:80938658-80938677 | None:intergenic | 40.0% | |
| CTAGGATGGATGATCATGAT+AGG | - | chr5.2:80940413-80940432 | MS.gene81279:intron | 40.0% | |
| CTTGATTTCCTTGTCTCCTT+CGG | + | chr5.2:80944354-80944373 | None:intergenic | 40.0% | |
| GAACATGGCAAGAAGTTTAG+CGG | - | chr5.2:80938437-80938456 | MS.gene81279:CDS | 40.0% | |
| GGGATCGGTTACTTAAAGTA+CGG | - | chr5.2:80939778-80939797 | MS.gene81279:intron | 40.0% | |
| GTGCTCTTAGAACACTCATT+AGG | - | chr5.2:80942784-80942803 | MS.gene81279:intron | 40.0% | |
| GTTTATTAGGATACACCTGC+AGG | - | chr5.2:80939881-80939900 | MS.gene81279:intron | 40.0% | |
| TAACTTCACCTACAGCATAC+TGG | + | chr5.2:80939842-80939861 | None:intergenic | 40.0% | |
| TAAGTCATCTTCATCAGGCA+CGG | + | chr5.2:80942976-80942995 | None:intergenic | 40.0% | |
| TAGATGGTCTTCGTCTACTT+GGG | - | chr5.2:80943771-80943790 | MS.gene81279:CDS | 40.0% | |
| TATGTTACAAGTTCGAGACG+AGG | + | chr5.2:80940794-80940813 | None:intergenic | 40.0% | |
| TCAGAGGGTTCATCAATGAT+AGG | - | chr5.2:80943722-80943741 | MS.gene81279:CDS | 40.0% | |
| TCAGCCCATTTATTAGGCAT+AGG | - | chr5.2:80942092-80942111 | MS.gene81279:intron | 40.0% | |
| TCTCTTTCACACAAAAACGG+AGG | + | chr5.2:80943267-80943286 | None:intergenic | 40.0% | |
| TCTGAACAAATGGAAGAGGT+TGG | - | chr5.2:80940676-80940695 | MS.gene81279:intron | 40.0% | |
| TGAACTCAAGAGCTCTACAA+TGG | - | chr5.2:80941871-80941890 | MS.gene81279:intron | 40.0% | |
| TGCTGAAAAAGCAGTTGAAG+TGG | - | chr5.2:80944209-80944228 | MS.gene81279:intron | 40.0% | |
| TGGACTTTAATTCTTGTGGC+AGG | - | chr5.2:80944155-80944174 | MS.gene81279:intron | 40.0% | |
| TGGCTGATATAGCAATCAGT+TGG | + | chr5.2:80942052-80942071 | None:intergenic | 40.0% | |
| TTACAAAATATGGCCCCGTT+TGG | + | chr5.2:80938982-80939001 | None:intergenic | 40.0% | |
| TTCGGATTGAATGCTTCAAG+AGG | - | chr5.2:80939098-80939117 | MS.gene81279:CDS | 40.0% | |
| TTGGTTACATTCAATCCTGC+AGG | + | chr5.2:80939899-80939918 | None:intergenic | 40.0% | |
| TTGTTAGGAGAGTTTCTCTC+TGG | + | chr5.2:80941961-80941980 | None:intergenic | 40.0% | |
| ! | AGAGACTTTAGTTCGTGTGT+TGG | - | chr5.2:80939121-80939140 | MS.gene81279:CDS | 40.0% |
| ! | GAGTATTGTAGCTTTGCTGA+TGG | - | chr5.2:80939193-80939212 | MS.gene81279:intron | 40.0% |
| ! | TCTGTGTGAAACAGAGTGTT+TGG | - | chr5.2:80943510-80943529 | MS.gene81279:intron | 40.0% |
| ! | TTAGTTCGTGTGTTGGTGTT+AGG | - | chr5.2:80939128-80939147 | MS.gene81279:CDS | 40.0% |
| !! | AGGTTCTGAACAAATGGAAG+AGG | - | chr5.2:80940672-80940691 | MS.gene81279:intron | 40.0% |
| !! | CCTATCAAAAAGTGCCTCTT+AGG | + | chr5.2:80942539-80942558 | None:intergenic | 40.0% |
| !! | GAAATGATCGTTTAGCTCTG+TGG | + | chr5.2:80941053-80941072 | None:intergenic | 40.0% |
| !! | GATGAACCCTCTGAAACAAA+GGG | + | chr5.2:80943716-80943735 | None:intergenic | 40.0% |
| !! | GCCTAATAAATGGGCTGAAT+AGG | + | chr5.2:80942090-80942109 | None:intergenic | 40.0% |
| !! | TCCGTTTTTGTGTGAAAGAG+AGG | - | chr5.2:80943266-80943285 | MS.gene81279:intron | 40.0% |
| !! | TGATGAACCCTCTGAAACAA+AGG | + | chr5.2:80943717-80943736 | None:intergenic | 40.0% |
| !! | TTGTTTTATCTCACGGGTCA+GGG | - | chr5.2:80939993-80940012 | MS.gene81279:intron | 40.0% |
| !!! | CCTAAGAGGCACTTTTTGAT+AGG | - | chr5.2:80942536-80942555 | MS.gene81279:intron | 40.0% |
| !!! | TTTGTTTTATCTCACGGGTC+AGG | - | chr5.2:80939992-80940011 | MS.gene81279:intron | 40.0% |
| AATACACATGTGGAGGCAAG+TGG | - | chr5.2:80942918-80942937 | MS.gene81279:intron | 45.0% | |
| ACCTTTGAACCACTGCTTTG+AGG | + | chr5.2:80944322-80944341 | None:intergenic | 45.0% | |
| ACTCAAGAGCTCTACAATGG+TGG | - | chr5.2:80941874-80941893 | MS.gene81279:intron | 45.0% | |
| AGAATGTTCCGAAGGAGACA+AGG | - | chr5.2:80944343-80944362 | MS.gene81279:intron | 45.0% | |
| AGAGAATGTTCTCGCTTCAG+AGG | - | chr5.2:80940216-80940235 | MS.gene81279:intron | 45.0% | |
| AGATGGTCTTCGTCTACTTG+GGG | - | chr5.2:80943772-80943791 | MS.gene81279:CDS | 45.0% | |
| AGCCATAAAGTAAGCTCCGA+TGG | + | chr5.2:80940051-80940070 | None:intergenic | 45.0% | |
| AGCCGATTGTTCAGCATCAT+TGG | + | chr5.2:80940743-80940762 | None:intergenic | 45.0% | |
| ATAAGGGGTGGAAGTAAGAG+AGG | + | chr5.2:80942013-80942032 | None:intergenic | 45.0% | |
| ATACACATGTGGAGGCAAGT+GGG | - | chr5.2:80942919-80942938 | MS.gene81279:intron | 45.0% | |
| ATGGGGGAAATTGGGAAGAA+AGG | - | chr5.2:80940314-80940333 | MS.gene81279:intron | 45.0% | |
| CAAAGGTCAGAATGTTCCGA+AGG | - | chr5.2:80944335-80944354 | MS.gene81279:intron | 45.0% | |
| CAGGGTGAAAATTCCCCATT+TGG | - | chr5.2:80939171-80939190 | MS.gene81279:intron | 45.0% | |
| CCTACAGCATACTGGTACTT+TGG | + | chr5.2:80939834-80939853 | None:intergenic | 45.0% | |
| CGAAGGAGACAAGGAAATCA+AGG | - | chr5.2:80944352-80944371 | MS.gene81279:intron | 45.0% | |
| CTAGATGGTCTTCGTCTACT+TGG | - | chr5.2:80943770-80943789 | MS.gene81279:CDS | 45.0% | |
| CTGGGGATTGAAAAAATGCG+AGG | + | chr5.2:80938498-80938517 | None:intergenic | 45.0% | |
| CTTACCTGTTTGATCCGTCT+TGG | + | chr5.2:80943799-80943818 | None:intergenic | 45.0% | |
| GAAATTCTCCCCTAATGCAG+TGG | - | chr5.2:80941700-80941719 | MS.gene81279:intron | 45.0% | |
| GACAATTGCATTGCCTCAGT+AGG | + | chr5.2:80941000-80941019 | None:intergenic | 45.0% | |
| GGTTAGGAGTTCTTGAACTC+CGG | + | chr5.2:80941921-80941940 | None:intergenic | 45.0% | |
| GGTTGGAGATTCTTGTGAAC+AGG | - | chr5.2:80940693-80940712 | MS.gene81279:intron | 45.0% | |
| GGTTTAAGCCAGTTGAACCA+TGG | + | chr5.2:80939530-80939549 | None:intergenic | 45.0% | |
| TAAGAGGATGAACAGAAGGG+CGG | + | chr5.2:80943832-80943851 | None:intergenic | 45.0% | |
| TAAGGGGTGGAAGTAAGAGA+GGG | + | chr5.2:80942012-80942031 | None:intergenic | 45.0% | |
| TAGGAGAGTTTCTCTCTGGT+AGG | + | chr5.2:80941957-80941976 | None:intergenic | 45.0% | |
| TGTGACTGACTGACGCAATA+CGG | + | chr5.2:80942622-80942641 | None:intergenic | 45.0% | |
| TTCACCCTGCATGATGTGTT+AGG | + | chr5.2:80939160-80939179 | None:intergenic | 45.0% | |
| ! | AGGAGCATATTGCTCTGGTT+AGG | + | chr5.2:80941937-80941956 | None:intergenic | 45.0% |
| ! | CCAAAGTACCAGTATGCTGT+AGG | - | chr5.2:80939831-80939850 | MS.gene81279:intron | 45.0% |
| ! | GAGAGCATATGGATAAGGCA+TGG | - | chr5.2:80944048-80944067 | MS.gene81279:intron | 45.0% |
| ! | GAGCTCTACAATGGTGGAAA+CGG | - | chr5.2:80941880-80941899 | MS.gene81279:intron | 45.0% |
| ! | GGTCAGCGACATTGTTTTCA+TGG | - | chr5.2:80944069-80944088 | MS.gene81279:intron | 45.0% |
| ! | TGTTTTATCTCACGGGTCAG+GGG | - | chr5.2:80939994-80940013 | MS.gene81279:intron | 45.0% |
| !! | GCAAAGTGTTGGCAGTGTAT+TGG | + | chr5.2:80943866-80943885 | None:intergenic | 45.0% |
| !!! | CTCGCATTTTTTCAATCCCC+AGG | - | chr5.2:80938496-80938515 | MS.gene81279:CDS | 45.0% |
| !! | TAAAAATTATAAAACAAAAA+AGG | + | chr5.2:80942812-80942831 | None:intergenic | 5.0% |
| ACACATAGCGTCAGTGATGC+AGG | - | chr5.2:80942368-80942387 | MS.gene81279:intron | 50.0% | |
| ATAGCGTCAGTGATGCAGGA+GGG | - | chr5.2:80942372-80942391 | MS.gene81279:intron | 50.0% | |
| ATCACTGCCTCCACTGCATT+AGG | + | chr5.2:80941713-80941732 | None:intergenic | 50.0% | |
| ATCAGGCACGGATCTAGTGT+GGG | + | chr5.2:80942964-80942983 | None:intergenic | 50.0% | |
| ATGTTCAGGCCTCAAAGCAG+TGG | - | chr5.2:80944310-80944329 | MS.gene81279:intron | 50.0% | |
| ATTCTCCCCTAATGCAGTGG+AGG | - | chr5.2:80941703-80941722 | MS.gene81279:intron | 50.0% | |
| CATTGCCTCAGTAGGAAGCA+CGG | + | chr5.2:80940992-80941011 | None:intergenic | 50.0% | |
| CGCGAGTTCAACGTCTAGTT+CGG | + | chr5.2:80939496-80939515 | None:intergenic | 50.0% | |
| CTATATCAGCCATCGCTCCA+CGG | - | chr5.2:80942060-80942079 | MS.gene81279:intron | 50.0% | |
| GATGGTCTTCGTCTACTTGG+GGG | - | chr5.2:80943773-80943792 | MS.gene81279:CDS | 50.0% | |
| GCCTATCTTCTTACTCCGCA+GGG | - | chr5.2:80941637-80941656 | MS.gene81279:intron | 50.0% | |
| GCCTCAAAGCAGTGGTTCAA+AGG | - | chr5.2:80944318-80944337 | MS.gene81279:intron | 50.0% | |
| GTTGAACTCGCGAGACTTCT+GGG | - | chr5.2:80939504-80939523 | MS.gene81279:intron | 50.0% | |
| TACACATGTGGAGGCAAGTG+GGG | - | chr5.2:80942920-80942939 | MS.gene81279:intron | 50.0% | |
| TATATCAGCCATCGCTCCAC+GGG | - | chr5.2:80942061-80942080 | MS.gene81279:intron | 50.0% | |
| TATCACCGTGCTTCCTACTG+AGG | - | chr5.2:80940984-80941003 | MS.gene81279:intron | 50.0% | |
| TCACTGCCTCCACTGCATTA+GGG | + | chr5.2:80941712-80941731 | None:intergenic | 50.0% | |
| TGCCTATCTTCTTACTCCGC+AGG | - | chr5.2:80941636-80941655 | MS.gene81279:intron | 50.0% | |
| TTTGATGCTTGGCACGGGAT+CGG | - | chr5.2:80939763-80939782 | MS.gene81279:intron | 50.0% | |
| ! | AGGTCGGTTCAAGGTTCAAC+CGG | - | chr5.2:80939594-80939613 | MS.gene81279:intron | 50.0% |
| ! | CTGGTAGGAGCATATTGCTC+TGG | + | chr5.2:80941942-80941961 | None:intergenic | 50.0% |
| ! | TGGCAGGCACTGTTCAAGAA+AGG | - | chr5.2:80944171-80944190 | MS.gene81279:intron | 50.0% |
| ! | TGGTAATGTTAGGAGCGGGT+TGG | + | chr5.2:80942119-80942138 | None:intergenic | 50.0% |
| ATAGGAAACCCGTGGAGCGA+TGG | + | chr5.2:80942072-80942091 | None:intergenic | 55.0% | |
| CACTGCCTCCACTGCATTAG+GGG | + | chr5.2:80941711-80941730 | None:intergenic | 55.0% | |
| CATAGCGTCAGTGATGCAGG+AGG | - | chr5.2:80942371-80942390 | MS.gene81279:intron | 55.0% | |
| CATCAGGCACGGATCTAGTG+TGG | + | chr5.2:80942965-80942984 | None:intergenic | 55.0% | |
| CGTTGAACTCGCGAGACTTC+TGG | - | chr5.2:80939503-80939522 | MS.gene81279:intron | 55.0% | |
| CTTCTGGGCCATGGTTCAAC+TGG | - | chr5.2:80939519-80939538 | MS.gene81279:intron | 55.0% | |
| GCCCTGCGGAGTAAGAAGAT+AGG | + | chr5.2:80941641-80941660 | None:intergenic | 55.0% | |
| GGATCTAGTGTGGGGGCAAT+GGG | + | chr5.2:80942955-80942974 | None:intergenic | 55.0% | |
| TCAGGCACGGATCTAGTGTG+GGG | + | chr5.2:80942963-80942982 | None:intergenic | 55.0% | |
| TGGGCTGAATAGGAAACCCG+TGG | + | chr5.2:80942080-80942099 | None:intergenic | 55.0% | |
| ! | ACTGGCTTAAACCGCTCGAG+CGG | - | chr5.2:80939537-80939556 | MS.gene81279:intron | 55.0% |
| ! | CTGACGCAATACGGAAGCGT+AGG | + | chr5.2:80942613-80942632 | None:intergenic | 55.0% |
| !! | CGGTTTTATCTCCGCTCGAG+CGG | + | chr5.2:80939551-80939570 | None:intergenic | 55.0% |
| CAGGCACGGATCTAGTGTGG+GGG | + | chr5.2:80942962-80942981 | None:intergenic | 60.0% | |
| CGGATCTAGTGTGGGGGCAA+TGG | + | chr5.2:80942956-80942975 | None:intergenic | 60.0% | |
| CGTCTACTTGGGGGCCAAGA+CGG | - | chr5.2:80943782-80943801 | MS.gene81279:CDS | 60.0% | |
| CTACTGCTGTGAGTGCCCTG+CGG | + | chr5.2:80941655-80941674 | None:intergenic | 60.0% | |
| GGGGCCAAGACGGATCAAAC+AGG | - | chr5.2:80943792-80943811 | MS.gene81279:CDS | 60.0% | |
| CTCGCGAGACTTCTGGGCCA+TGG | - | chr5.2:80939510-80939529 | MS.gene81279:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 80938435 | 80944467 | 80938435 | ID=MS.gene81279 |
| chr5.2 | mRNA | 80938435 | 80944467 | 80938435 | ID=MS.gene81279.t1;Parent=MS.gene81279 |
| chr5.2 | exon | 80944385 | 80944467 | 80944385 | ID=MS.gene81279.t1.exon1;Parent=MS.gene81279.t1 |
| chr5.2 | CDS | 80944385 | 80944467 | 80944385 | ID=cds.MS.gene81279.t1;Parent=MS.gene81279.t1 |
| chr5.2 | exon | 80943571 | 80943818 | 80943571 | ID=MS.gene81279.t1.exon2;Parent=MS.gene81279.t1 |
| chr5.2 | CDS | 80943571 | 80943818 | 80943571 | ID=cds.MS.gene81279.t1;Parent=MS.gene81279.t1 |
| chr5.2 | exon | 80942120 | 80942228 | 80942120 | ID=MS.gene81279.t1.exon3;Parent=MS.gene81279.t1 |
| chr5.2 | CDS | 80942120 | 80942228 | 80942120 | ID=cds.MS.gene81279.t1;Parent=MS.gene81279.t1 |
| chr5.2 | exon | 80941152 | 80941244 | 80941152 | ID=MS.gene81279.t1.exon4;Parent=MS.gene81279.t1 |
| chr5.2 | CDS | 80941152 | 80941244 | 80941152 | ID=cds.MS.gene81279.t1;Parent=MS.gene81279.t1 |
| chr5.2 | exon | 80939089 | 80939176 | 80939089 | ID=MS.gene81279.t1.exon5;Parent=MS.gene81279.t1 |
| chr5.2 | CDS | 80939089 | 80939176 | 80939089 | ID=cds.MS.gene81279.t1;Parent=MS.gene81279.t1 |
| chr5.2 | exon | 80938435 | 80938725 | 80938435 | ID=MS.gene81279.t1.exon6;Parent=MS.gene81279.t1 |
| chr5.2 | CDS | 80938435 | 80938725 | 80938435 | ID=cds.MS.gene81279.t1;Parent=MS.gene81279.t1 |
| Gene Sequence |
| Protein sequence |
