Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051626.t1 | XP_003589026.1 | 96 | 531 | 14 | 1 | 1 | 531 | 1 | 524 | 3.50E-266 | 927.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051626.t1 | P48731 | 59.1 | 286 | 102 | 4 | 221 | 505 | 175 | 446 | 6.6e-80 | 299.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051626.t1 | G7IB93 | 96.0 | 531 | 14 | 1 | 1 | 531 | 1 | 524 | 2.5e-266 | 927.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051626.t1 | TF | HB-BELL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049382 | MS.gene051626 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene051626 | 0.803364 | 3.61E-49 | -1.69E-46 |
| MS.gene050584 | MS.gene051626 | 0.800413 | 1.46E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene051626 | 0.801637 | 8.20E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene051789 | 0.870612 | 1.28E-66 | -1.69E-46 |
| MS.gene051626 | MS.gene052967 | 0.857955 | 1.15E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene053074 | 0.877874 | 4.43E-69 | -1.69E-46 |
| MS.gene051626 | MS.gene053204 | 0.803283 | 3.75E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene053630 | 0.810568 | 1.08E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene054184 | 0.85321 | 2.78E-61 | -1.69E-46 |
| MS.gene051626 | MS.gene054185 | 0.857583 | 1.48E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene05456 | 0.830563 | 2.74E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene054596 | 0.857582 | 1.48E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene055207 | 0.823502 | 1.34E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene057754 | 0.80613 | 9.55E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene058168 | 0.856244 | 3.67E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene058906 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene059006 | 0.872612 | 2.78E-67 | -1.69E-46 |
| MS.gene051626 | MS.gene060476 | 0.844544 | 7.08E-59 | -1.69E-46 |
| MS.gene051626 | MS.gene061362 | 0.842681 | 2.23E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene061879 | 0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene061893 | 0.814336 | 1.62E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene062354 | 0.8313 | 1.81E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene062429 | 0.864186 | 1.46E-64 | -1.69E-46 |
| MS.gene051626 | MS.gene06339 | 0.842081 | 3.22E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene063807 | 0.808089 | 3.67E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene064944 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene065378 | 0.805177 | 1.51E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene06594 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene066856 | 0.823709 | 1.20E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene067073 | 0.804011 | 2.65E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene067305 | 0.846928 | 1.60E-59 | -1.69E-46 |
| MS.gene051626 | MS.gene067380 | 0.823263 | 1.52E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene067461 | 0.803455 | 3.46E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene06806 | 0.812558 | 3.99E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene068614 | 0.813667 | 2.28E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene069147 | 0.809937 | 1.48E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene069359 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene070405 | 0.812335 | 4.47E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene070594 | 0.808802 | 2.59E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene070595 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene070597 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene070876 | 0.81269 | 3.73E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene070898 | 0.821833 | 3.27E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene07115 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene073309 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene074616 | 0.818312 | 2.09E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene074617 | 0.819461 | 1.15E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene07942 | 0.875459 | 3.03E-68 | -1.69E-46 |
| MS.gene051626 | MS.gene07948 | 0.833203 | 6.10E-56 | -1.69E-46 |
| MS.gene051626 | MS.gene08514 | 0.832114 | 1.14E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene20359 | 0.809563 | 1.78E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene22560 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene22587 | 0.830993 | 2.15E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene22856 | 0.803312 | 3.70E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene23012 | 0.866944 | 1.97E-65 | -1.69E-46 |
| MS.gene051626 | MS.gene23105 | 0.802314 | 5.95E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene23251 | 0.805196 | 1.50E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene24039 | 0.857956 | 1.15E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene24114 | 0.844917 | 5.62E-59 | -1.69E-46 |
| MS.gene051626 | MS.gene24118 | 0.829106 | 6.20E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene24546 | 0.93654 | 1.47E-97 | -1.69E-46 |
| MS.gene051626 | MS.gene25229 | 0.809337 | 1.99E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene26235 | 0.803393 | 3.56E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene26752 | 0.807911 | 4.01E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene27095 | 0.82431 | 8.65E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene27991 | 0.801942 | 7.10E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene28341 | 0.82744 | 1.56E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene28929 | 0.80287 | 4.57E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene29146 | 0.814251 | 1.69E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene29822 | 0.838143 | 3.43E-57 | -1.69E-46 |
| MS.gene051626 | MS.gene31358 | 0.82839 | 9.23E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene31359 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene31604 | 0.817221 | 3.69E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene32978 | 0.931938 | 1.80E-94 | -1.69E-46 |
| MS.gene051626 | MS.gene34106 | 0.838646 | 2.54E-57 | -1.69E-46 |
| MS.gene051626 | MS.gene35428 | 0.866915 | 2.01E-65 | -1.69E-46 |
| MS.gene051626 | MS.gene35590 | 0.817459 | 3.26E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene35592 | 0.845249 | 4.57E-59 | -1.69E-46 |
| MS.gene051626 | MS.gene35695 | 0.872413 | 3.24E-67 | -1.69E-46 |
| MS.gene051626 | MS.gene38528 | 0.840366 | 9.08E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene38772 | 0.846853 | 1.67E-59 | -1.69E-46 |
| MS.gene051626 | MS.gene39152 | 0.812355 | 4.42E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene39341 | 0.81382 | 2.11E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene39658 | 0.843778 | 1.14E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene40106 | 0.82089 | 5.40E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene40950 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene41839 | 0.829646 | 4.58E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene41915 | 0.850106 | 2.10E-60 | -1.69E-46 |
| MS.gene051626 | MS.gene42101 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene44274 | 0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene45085 | 0.854832 | 9.47E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene45439 | 0.850498 | 1.63E-60 | -1.69E-46 |
| MS.gene051626 | MS.gene47283 | 0.861591 | 9.21E-64 | -1.69E-46 |
| MS.gene051626 | MS.gene47338 | 0.819162 | 1.34E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene47339 | 0.820667 | 6.08E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene47340 | 0.819065 | 1.41E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene47955 | 0.803287 | 3.75E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene48835 | 0.805754 | 1.15E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene49203 | 0.814572 | 1.44E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene49839 | 0.821355 | 4.22E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene52365 | 0.820953 | 5.22E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene53305 | 0.825799 | 3.85E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene53586 | 0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene54020 | 0.821672 | 3.56E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene54407 | 0.829149 | 6.05E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene55625 | 0.821237 | 4.49E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene55887 | 0.803873 | 2.83E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene55988 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene56179 | 0.820256 | 7.55E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene56555 | 0.820903 | 5.36E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene57222 | 0.945505 | 2.69E-104 | -1.69E-46 |
| MS.gene051626 | MS.gene58532 | 0.823206 | 1.57E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene59372 | 0.831409 | 1.70E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene59876 | 0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene61586 | 0.822334 | 2.50E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene62594 | 0.83069 | 2.55E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene62720 | 0.889908 | 1.59E-73 | -1.69E-46 |
| MS.gene051626 | MS.gene63818 | 0.82541 | 4.76E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene63819 | 0.81589 | 7.33E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene63902 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene64051 | 0.840985 | 6.25E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene64101 | 0.809123 | 2.21E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene64425 | 0.839458 | 1.57E-57 | -1.69E-46 |
| MS.gene051626 | MS.gene64740 | 0.802026 | 6.82E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene65399 | 0.841301 | 5.16E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene65661 | 0.811791 | 5.87E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene66736 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene67002 | 0.80295 | 4.40E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene67384 | 0.826997 | 2.00E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene68877 | 0.800349 | 1.50E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene68959 | 0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene70819 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene71333 | 0.812894 | 3.37E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene72203 | 0.81919 | 1.32E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene72268 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene72718 | 0.802003 | 6.89E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene73257 | 0.827952 | 1.18E-54 | -1.69E-46 |
| MS.gene051626 | MS.gene74084 | 0.814267 | 1.68E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene74980 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene75321 | 0.875794 | 2.33E-68 | -1.69E-46 |
| MS.gene051626 | MS.gene75655 | 0.805596 | 1.24E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene76705 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene77547 | 0.800871 | 1.18E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene80283 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene80842 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene80996 | 0.829009 | 6.54E-55 | -1.69E-46 |
| MS.gene051626 | MS.gene81279 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene82214 | 0.845518 | 3.86E-59 | -1.69E-46 |
| MS.gene051626 | MS.gene82571 | 0.8105 | 1.12E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene82810 | 0.849405 | 3.30E-60 | -1.69E-46 |
| MS.gene051626 | MS.gene84086 | 0.804871 | 1.75E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene84833 | 0.848115 | 7.53E-60 | -1.69E-46 |
| MS.gene051626 | MS.gene86114 | 0.850074 | 2.15E-60 | -1.69E-46 |
| MS.gene051626 | MS.gene86678 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene86987 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene87037 | 0.818134 | 2.30E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene87771 | 0.805702 | 1.18E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene87804 | 0.83941 | 1.61E-57 | -1.69E-46 |
| MS.gene051626 | MS.gene87897 | 0.809917 | 1.49E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene88243 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene88788 | 0.837413 | 5.28E-57 | -1.69E-46 |
| MS.gene051626 | MS.gene88960 | 0.854062 | 1.58E-61 | -1.69E-46 |
| MS.gene051626 | MS.gene89326 | 0.820944 | 5.25E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene90151 | 0.802532 | 5.37E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene91762 | 0.834221 | 3.40E-56 | -1.69E-46 |
| MS.gene051626 | MS.gene92590 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene94662 | 0.832899 | 7.26E-56 | -1.69E-46 |
| MS.gene051626 | MS.gene95236 | 0.81364 | 2.31E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene95739 | 0.805539 | 1.27E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene96503 | 0.834096 | 3.65E-56 | -1.69E-46 |
| MS.gene051626 | MS.gene96507 | 0.821334 | 4.27E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene96810 | 0.816473 | 5.43E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene97857 | 0.843228 | 1.59E-58 | -1.69E-46 |
| MS.gene051626 | MS.gene97858 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene98318 | 0.851193 | 1.04E-60 | -1.69E-46 |
| MS.gene051626 | MS.gene99735 | 0.821051 | 4.96E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051626 | MS.gene034624 | PPI |
| MS.gene051626 | MS.gene39202 | PPI |
| MS.gene051626 | MS.gene46486 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051626.t1 | MTR_1g016490 | 96.987 | 531 | 9 | 1 | 1 | 531 | 1 | 524 | 0.0 | 1058 |
| MS.gene051626.t1 | MTR_4g051532 | 35.739 | 291 | 157 | 7 | 250 | 523 | 217 | 494 | 9.67e-48 | 177 |
| MS.gene051626.t1 | MTR_3g112300 | 38.462 | 260 | 150 | 5 | 247 | 500 | 159 | 414 | 2.58e-44 | 164 |
| MS.gene051626.t1 | MTR_3g112300 | 38.462 | 260 | 150 | 5 | 247 | 500 | 159 | 414 | 5.59e-44 | 164 |
| MS.gene051626.t1 | MTR_1g023050 | 37.548 | 261 | 144 | 5 | 252 | 500 | 172 | 425 | 9.91e-44 | 164 |
| MS.gene051626.t1 | MTR_7g106320 | 43.005 | 193 | 96 | 4 | 318 | 500 | 239 | 427 | 5.75e-43 | 162 |
| MS.gene051626.t1 | MTR_8g078480 | 38.739 | 222 | 120 | 5 | 306 | 517 | 447 | 662 | 1.04e-41 | 160 |
| MS.gene051626.t1 | MTR_1g057790 | 35.915 | 284 | 152 | 5 | 251 | 517 | 162 | 432 | 3.79e-41 | 157 |
| MS.gene051626.t1 | MTR_3g112290 | 36.842 | 266 | 146 | 7 | 247 | 500 | 162 | 417 | 8.37e-41 | 153 |
| MS.gene051626.t1 | MTR_5g018860 | 38.739 | 222 | 117 | 6 | 306 | 518 | 394 | 605 | 3.54e-40 | 155 |
| MS.gene051626.t1 | MTR_8g098815 | 41.899 | 179 | 95 | 4 | 325 | 494 | 254 | 432 | 7.26e-39 | 150 |
| MS.gene051626.t1 | MTR_4g019450 | 31.541 | 279 | 167 | 7 | 247 | 522 | 193 | 450 | 6.51e-37 | 144 |
| MS.gene051626.t1 | MTR_7g065050 | 37.624 | 202 | 117 | 5 | 329 | 525 | 200 | 397 | 2.27e-36 | 142 |
| MS.gene051626.t1 | MTR_2g095050 | 36.923 | 195 | 105 | 3 | 322 | 498 | 312 | 506 | 1.18e-33 | 135 |
| MS.gene051626.t1 | MTR_3g112300 | 34.874 | 238 | 145 | 5 | 247 | 478 | 159 | 392 | 2.02e-29 | 120 |
| MS.gene051626.t1 | MTR_3g112300 | 31.797 | 217 | 138 | 5 | 247 | 457 | 159 | 371 | 1.61e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051626.t1 | AT4G32980 | 58.228 | 316 | 110 | 6 | 191 | 505 | 152 | 446 | 2.93e-110 | 337 |
| MS.gene051626.t1 | AT4G32980 | 58.228 | 316 | 110 | 6 | 191 | 505 | 152 | 446 | 2.93e-110 | 337 |
| MS.gene051626.t1 | AT2G16400 | 36.918 | 279 | 149 | 7 | 247 | 517 | 111 | 370 | 2.31e-43 | 161 |
| MS.gene051626.t1 | AT2G27220 | 41.622 | 185 | 82 | 5 | 324 | 500 | 131 | 297 | 4.34e-42 | 156 |
| MS.gene051626.t1 | AT2G27220 | 41.622 | 185 | 82 | 5 | 324 | 500 | 131 | 297 | 4.34e-42 | 156 |
| MS.gene051626.t1 | AT1G19700 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.46e-42 | 157 |
| MS.gene051626.t1 | AT1G19700 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.46e-42 | 157 |
| MS.gene051626.t1 | AT1G19700 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.46e-42 | 157 |
| MS.gene051626.t1 | AT1G19700 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.46e-42 | 157 |
| MS.gene051626.t1 | AT1G19700 | 34.799 | 273 | 145 | 7 | 247 | 500 | 162 | 420 | 7.46e-42 | 157 |
| MS.gene051626.t1 | AT4G34610 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.14e-41 | 157 |
| MS.gene051626.t1 | AT4G34610 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.14e-41 | 157 |
| MS.gene051626.t1 | AT4G34610 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.14e-41 | 157 |
| MS.gene051626.t1 | AT4G34610 | 32.873 | 362 | 199 | 12 | 149 | 500 | 56 | 383 | 1.14e-41 | 157 |
| MS.gene051626.t1 | AT1G75410 | 35.632 | 261 | 152 | 6 | 247 | 500 | 164 | 415 | 2.38e-41 | 156 |
| MS.gene051626.t1 | AT1G75410 | 35.632 | 261 | 152 | 6 | 247 | 500 | 164 | 415 | 2.38e-41 | 156 |
| MS.gene051626.t1 | AT2G27220 | 42.941 | 170 | 71 | 5 | 339 | 500 | 164 | 315 | 1.55e-38 | 147 |
| MS.gene051626.t1 | AT1G75430 | 40.314 | 191 | 99 | 3 | 323 | 500 | 83 | 271 | 4.45e-38 | 142 |
| MS.gene051626.t1 | AT4G36870 | 36.538 | 208 | 114 | 4 | 305 | 500 | 366 | 567 | 2.32e-37 | 147 |
| MS.gene051626.t1 | AT4G36870 | 36.538 | 208 | 114 | 4 | 305 | 500 | 366 | 567 | 2.32e-37 | 147 |
| MS.gene051626.t1 | AT2G23760 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.14e-36 | 142 |
| MS.gene051626.t1 | AT2G23760 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.14e-36 | 142 |
| MS.gene051626.t1 | AT2G23760 | 37.255 | 204 | 110 | 4 | 307 | 498 | 294 | 491 | 4.14e-36 | 142 |
| MS.gene051626.t1 | AT5G41410 | 39.899 | 198 | 105 | 5 | 319 | 503 | 267 | 463 | 1.96e-35 | 140 |
| MS.gene051626.t1 | AT2G27990 | 40.462 | 173 | 99 | 3 | 328 | 499 | 323 | 492 | 1.48e-34 | 137 |
| MS.gene051626.t1 | AT2G35940 | 29.064 | 406 | 239 | 10 | 126 | 492 | 51 | 446 | 6.13e-34 | 136 |
| MS.gene051626.t1 | AT2G35940 | 29.064 | 406 | 239 | 10 | 126 | 492 | 51 | 446 | 6.13e-34 | 136 |
| MS.gene051626.t1 | AT2G35940 | 29.064 | 406 | 239 | 10 | 126 | 492 | 51 | 446 | 6.13e-34 | 136 |
| MS.gene051626.t1 | AT5G02030 | 36.813 | 182 | 100 | 3 | 332 | 498 | 234 | 415 | 9.52e-30 | 123 |
| MS.gene051626.t1 | AT2G23760 | 29.688 | 256 | 110 | 5 | 307 | 498 | 294 | 543 | 1.08e-27 | 117 |
| MS.gene051626.t1 | AT1G75410 | 30.962 | 239 | 149 | 6 | 247 | 478 | 164 | 393 | 1.00e-25 | 109 |
| MS.gene051626.t1 | AT4G36870 | 31.551 | 187 | 110 | 4 | 305 | 479 | 366 | 546 | 9.54e-23 | 102 |
| MS.gene051626.t1 | AT4G36870 | 30.811 | 185 | 110 | 4 | 305 | 477 | 366 | 544 | 1.03e-21 | 99.4 |
| MS.gene051626.t1 | AT1G75430 | 31.081 | 148 | 87 | 3 | 323 | 457 | 83 | 228 | 1.39e-13 | 72.0 |
| MS.gene051626.t1 | AT2G27990 | 32.824 | 131 | 84 | 3 | 328 | 457 | 323 | 450 | 1.02e-12 | 70.9 |
Find 91 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATACATATTCAATAAT+TGG | 0.188620 | 1.3:-5740477 | MS.gene051626:CDS |
| AATGGAATTCCAATACTTTC+TGG | 0.223215 | 1.3:-5740682 | MS.gene051626:CDS |
| ATCTTTCTGGCAAGCCCCTT+TGG | 0.227378 | 1.3:+5738889 | None:intergenic |
| AACCAAAACAACATCATAAA+TGG | 0.230798 | 1.3:-5740700 | MS.gene051626:CDS |
| ATGGAACTTTCTATGAGTTT+AGG | 0.232674 | 1.3:-5740124 | MS.gene051626:CDS |
| TCTTTCTGGCAAGCCCCTTT+GGG | 0.243439 | 1.3:+5738890 | None:intergenic |
| AAATGCTTCTCTGCATCTTT+AGG | 0.274049 | 1.3:+5738582 | None:intergenic |
| TCTTGATGAGATAAACTATT+CGG | 0.288114 | 1.3:-5739999 | MS.gene051626:CDS |
| TTCCATTTATGATGTTGTTT+TGG | 0.288436 | 1.3:+5740698 | None:intergenic |
| TGGAACTTTCTATGAGTTTA+GGG | 0.292728 | 1.3:-5740123 | MS.gene051626:CDS |
| AACGGTTTCTCGACTATATA+AGG | 0.297571 | 1.3:-5739069 | MS.gene051626:CDS |
| CTGTTTCCGTTCTACGTGAT+TGG | 0.305984 | 1.3:-5738866 | MS.gene051626:CDS |
| AACCCCTTGTGTGCAACTTT+TGG | 0.320504 | 1.3:-5740436 | MS.gene051626:CDS |
| TATTCGGGTTCTGGTGTTAG+AGG | 0.338538 | 1.3:-5739983 | MS.gene051626:CDS |
| GAGATAAACTATTCGGGTTC+TGG | 0.339602 | 1.3:-5739992 | MS.gene051626:CDS |
| ACAAGCCTCATGTAGTAGTA+TGG | 0.375487 | 1.3:-5740143 | MS.gene051626:CDS |
| GAATGGAACAAGATCGGGTT+TGG | 0.377735 | 1.3:-5740167 | MS.gene051626:CDS |
| TTTGATGATTGCCATCCATT+TGG | 0.383458 | 1.3:+5740319 | None:intergenic |
| AAGATACCTTGCTGTAATTC+AGG | 0.388861 | 1.3:-5740059 | MS.gene051626:CDS |
| GGTTTATAAATGCGCGTGTT+CGG | 0.404462 | 1.3:-5738193 | MS.gene051626:CDS |
| AAGTTCATTGCTACAATTTG+AGG | 0.409458 | 1.3:+5740264 | None:intergenic |
| CTTGATGAGATAAACTATTC+GGG | 0.413238 | 1.3:-5739998 | MS.gene051626:CDS |
| AGAACGGAAACAGATCTTTC+TGG | 0.415143 | 1.3:+5738876 | None:intergenic |
| TAAATGCGCGTGTTCGGCTA+TGG | 0.423300 | 1.3:-5738187 | MS.gene051626:CDS |
| TTCATTCATTCAAAAGCAAT+GGG | 0.425095 | 1.3:-5738952 | MS.gene051626:CDS |
| TATCTTGATCCTAATATTGC+CGG | 0.425897 | 1.3:+5740076 | None:intergenic |
| TGCCAATTATTGAATATGTA+TGG | 0.427184 | 1.3:+5740475 | None:intergenic |
| GCATACATTTCCTCAATCAA+TGG | 0.431572 | 1.3:+5738161 | None:intergenic |
| AAATGTTTAATATGAATTGA+AGG | 0.435021 | 1.3:-5738058 | None:intergenic |
| CTTGCAACATCACCAACTTC+AGG | 0.442716 | 1.3:-5740232 | MS.gene051626:CDS |
| TAGCAAACATATTCTTTCCA+TGG | 0.443732 | 1.3:-5739030 | MS.gene051626:CDS |
| GGGCTCTTCAACAGTTGAAA+AGG | 0.453231 | 1.3:-5738932 | MS.gene051626:CDS |
| CAGTCAATATAGTCAATGTT+TGG | 0.454449 | 1.3:-5739171 | MS.gene051626:CDS |
| TTATTAACAATGAGATTTGA+GGG | 0.454533 | 1.3:+5740556 | None:intergenic |
| TGCACACTTTGCTGTCAAAA+CGG | 0.454758 | 1.3:-5739087 | MS.gene051626:CDS |
| TGAAAAGGAAAGATCAGTTA+TGG | 0.458634 | 1.3:-5738917 | MS.gene051626:CDS |
| GTTATTAACAATGAGATTTG+AGG | 0.462088 | 1.3:+5740555 | None:intergenic |
| CTTCATTCATTCAAAAGCAA+TGG | 0.463764 | 1.3:-5738953 | MS.gene051626:CDS |
| TGTTCTCCACCAGAAAGTAT+TGG | 0.466176 | 1.3:+5740673 | None:intergenic |
| GCAAAGTGTGCATGTATTTG+TGG | 0.466187 | 1.3:+5739098 | None:intergenic |
| AGCATGAATGGAACAAGATC+GGG | 0.483225 | 1.3:-5740172 | MS.gene051626:CDS |
| AAAGCTCAAGAGAGTAATGT+TGG | 0.486264 | 1.3:-5740382 | MS.gene051626:CDS |
| ATTTATTCCTATCCTTCGCT+TGG | 0.489525 | 1.3:+5739928 | None:intergenic |
| TTCATGGTCAGAAGAGGATA+AGG | 0.491594 | 1.3:-5738991 | MS.gene051626:CDS |
| AGCAAACATATTCTTTCCAT+GGG | 0.494717 | 1.3:-5739029 | MS.gene051626:CDS |
| TCAGCATAAGCCTCTGACAT+AGG | 0.495314 | 1.3:+5739893 | None:intergenic |
| ACTGTTAAAATTTGATCCCA+TGG | 0.497477 | 1.3:+5739013 | None:intergenic |
| GACTTAACTCATAGCATGAA+TGG | 0.499550 | 1.3:-5740184 | MS.gene051626:CDS |
| ATGAGAGCAGTGAAAGAAGC+AGG | 0.499804 | 1.3:-5738097 | MS.gene051626:CDS |
| GGTTCTGGTGTTAGAGGCCG+AGG | 0.503924 | 1.3:-5739977 | MS.gene051626:CDS |
| TGGTTGTGTAGGTATCAAAC+TGG | 0.504145 | 1.3:-5738214 | MS.gene051626:intron |
| AAGTGGGTTGACTAGAAGTC+AGG | 0.504398 | 1.3:-5738547 | MS.gene051626:intron |
| AACAAATGAATTATCAGCTA+TGG | 0.505083 | 1.3:+5740612 | None:intergenic |
| TCTTGAAGACCAATTCTAGC+AGG | 0.505334 | 1.3:+5740517 | None:intergenic |
| AGAAAAGCTTGTCGAAATGA+AGG | 0.508701 | 1.3:-5738125 | MS.gene051626:CDS |
| ATCAGTTATGGAGGCCCCAA+AGG | 0.509828 | 1.3:-5738905 | MS.gene051626:CDS |
| CTTTCTGGCAAGCCCCTTTG+GGG | 0.514861 | 1.3:+5738891 | None:intergenic |
| TCAGTTATGGAGGCCCCAAA+GGG | 0.515348 | 1.3:-5738904 | MS.gene051626:CDS |
| TCATGTCATATTCGCCGATA+GGG | 0.529853 | 1.3:-5740351 | MS.gene051626:CDS |
| ATAGGGAACATCGATCCAAA+TGG | 0.530007 | 1.3:-5740334 | MS.gene051626:CDS |
| TAGCATGAATGGAACAAGAT+CGG | 0.530199 | 1.3:-5740173 | MS.gene051626:CDS |
| ACAAAGTTGATTTATTTCCT+CGG | 0.530630 | 1.3:+5739960 | None:intergenic |
| GGTCAATGCTCAGAGATTAG+TGG | 0.536668 | 1.3:-5740211 | MS.gene051626:CDS |
| ATGCTGATTCTTCATTGCAA+AGG | 0.542693 | 1.3:-5739877 | MS.gene051626:CDS |
| GCTATGGAAACCATTGATTG+AGG | 0.555071 | 1.3:-5738171 | MS.gene051626:CDS |
| ATCACCAAAAGTTGCACACA+AGG | 0.561105 | 1.3:+5740432 | None:intergenic |
| TCTGAGCATTGACCTGAAGT+TGG | 0.571861 | 1.3:+5740220 | None:intergenic |
| CACCAAAAGTTGCACACAAG+GGG | 0.572833 | 1.3:+5740434 | None:intergenic |
| TAACAGTTCATGGTCAGAAG+AGG | 0.576067 | 1.3:-5738997 | MS.gene051626:CDS |
| GGAATTCCAATACTTTCTGG+TGG | 0.576914 | 1.3:-5740679 | MS.gene051626:CDS |
| ACTCTTGATGCTTCTACAGA+TGG | 0.577737 | 1.3:-5739828 | MS.gene051626:intron |
| ACTGCTCAAATGAACATGGC+TGG | 0.584941 | 1.3:-5740802 | MS.gene051626:CDS |
| AACACAACCAAGCGAAGGAT+AGG | 0.588145 | 1.3:-5739935 | MS.gene051626:CDS |
| TTGTTACATCACAACATGGA+AGG | 0.589701 | 1.3:-5740594 | MS.gene051626:CDS |
| AATGAATAGCAATGAATGAG+TGG | 0.594918 | 1.3:+5740733 | None:intergenic |
| AAACATCCAATCACGTAGAA+CGG | 0.600137 | 1.3:+5738860 | None:intergenic |
| TTCATGTCATATTCGCCGAT+AGG | 0.602007 | 1.3:-5740352 | MS.gene051626:CDS |
| ACAACATGGAAGGACTATTG+TGG | 0.614360 | 1.3:-5740584 | MS.gene051626:CDS |
| TTTGGATCGATGTTCCCTAT+CGG | 0.616890 | 1.3:+5740337 | None:intergenic |
| TAGATAATACTTACGGATGG+AGG | 0.617974 | 1.3:+5738829 | None:intergenic |
| TATATAAGGACTTGAGAGAG+AGG | 0.620065 | 1.3:-5739055 | MS.gene051626:CDS |
| AAGTTCCATACTACTACATG+AGG | 0.620943 | 1.3:+5740138 | None:intergenic |
| GGAACATCGATCCAAATGGA+TGG | 0.633164 | 1.3:-5740330 | MS.gene051626:CDS |
| CGATGAGAGTCCTATGTCAG+AGG | 0.633802 | 1.3:-5739903 | MS.gene051626:CDS |
| TCACCAAAAGTTGCACACAA+GGG | 0.650888 | 1.3:+5740433 | None:intergenic |
| TCATTTGTTACATCACAACA+TGG | 0.664816 | 1.3:-5740598 | MS.gene051626:CDS |
| AAAGGAAAGATCAGTTATGG+AGG | 0.667219 | 1.3:-5738914 | MS.gene051626:CDS |
| TGTCGAACACAACCAAGCGA+AGG | 0.672572 | 1.3:-5739940 | MS.gene051626:CDS |
| GTACACTGCTCAAATGAACA+TGG | 0.673477 | 1.3:-5740806 | MS.gene051626:CDS |
| GTATTTCCTGAATTACAGCA+AGG | 0.683112 | 1.3:+5740053 | None:intergenic |
| CAGTTATGGAGGCCCCAAAG+GGG | 0.731077 | 1.3:-5738903 | MS.gene051626:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATCTTATTATTATAGATAA+AGG | + | chr1.3:5740230-5740249 | None:intergenic | 15.0% |
| !! | TGAATTTAATGTAATCTAAA+TGG | + | chr1.3:5739090-5739109 | None:intergenic | 15.0% |
| !!! | TAACCAAAGTTTTAATATAA+AGG | - | chr1.3:5740087-5740106 | MS.gene051626:CDS | 15.0% |
| !!! | TAATAACTTTTATACGATAA+GGG | + | chr1.3:5740605-5740624 | None:intergenic | 15.0% |
| !!! | TTAATAACTTTTATACGATA+AGG | + | chr1.3:5740606-5740625 | None:intergenic | 15.0% |
| !! | AGACCTTTATATTAAAACTT+TGG | + | chr1.3:5740093-5740112 | None:intergenic | 20.0% |
| !! | AGTGATTAGAGTTATATTTA+TGG | - | chr1.3:5740643-5740662 | MS.gene051626:CDS | 20.0% |
| !! | ATTAGAGTTATATTTATGGT+TGG | - | chr1.3:5740647-5740666 | MS.gene051626:CDS | 20.0% |
| !! | ATTTACTTGCAATAAAAAGT+GGG | - | chr1.3:5740318-5740337 | MS.gene051626:CDS | 20.0% |
| !! | TCGATTATAGATAATACTTA+CGG | + | chr1.3:5740062-5740081 | None:intergenic | 20.0% |
| !! | TTATTAACAATGAGATTTGA+GGG | + | chr1.3:5738328-5738347 | None:intergenic | 20.0% |
| !! | TTCCATACATATTCAATAAT+TGG | - | chr1.3:5738404-5738423 | MS.gene051626:intron | 20.0% |
| !! | TTTCAACTGATAAATAATCT+TGG | + | chr1.3:5740503-5740522 | None:intergenic | 20.0% |
| !!! | ACTTTTCCAAGTAAAATTTA+TGG | - | chr1.3:5739466-5739485 | MS.gene051626:intron | 20.0% |
| !!! | CATGTAAATTGATTTATGTT+TGG | + | chr1.3:5739342-5739361 | None:intergenic | 20.0% |
| !!! | TTAAAACTGATTTTGGTATT+TGG | - | chr1.3:5740446-5740465 | MS.gene051626:CDS | 20.0% |
| ! | AACAAATGAATTATCAGCTA+TGG | + | chr1.3:5738272-5738291 | None:intergenic | 25.0% |
| ! | AACCAAAACAACATCATAAA+TGG | - | chr1.3:5738181-5738200 | MS.gene051626:CDS | 25.0% |
| ! | ATTTATCAGTTGAAAACATG+TGG | - | chr1.3:5740508-5740527 | MS.gene051626:CDS | 25.0% |
| ! | CATTTACTTGCAATAAAAAG+TGG | - | chr1.3:5740317-5740336 | MS.gene051626:CDS | 25.0% |
| ! | GTTATTAACAATGAGATTTG+AGG | + | chr1.3:5738329-5738348 | None:intergenic | 25.0% |
| ! | TCTTGATGAGATAAACTATT+CGG | - | chr1.3:5738882-5738901 | MS.gene051626:CDS | 25.0% |
| ! | TGCCAATTATTGAATATGTA+TGG | + | chr1.3:5738409-5738428 | None:intergenic | 25.0% |
| ! | TTATAGATAATACTTACGGA+TGG | + | chr1.3:5740058-5740077 | None:intergenic | 25.0% |
| ! | TTCATTCATTCAAAAGCAAT+GGG | - | chr1.3:5739929-5739948 | MS.gene051626:CDS | 25.0% |
| ! | TTCCAAGTAAAATTTATGGA+TGG | - | chr1.3:5739470-5739489 | MS.gene051626:intron | 25.0% |
| ! | TTGATTTCTGATGTTTAGAA+TGG | - | chr1.3:5739188-5739207 | MS.gene051626:intron | 25.0% |
| !! | AACCATCCATAAATTTTACT+TGG | + | chr1.3:5739475-5739494 | None:intergenic | 25.0% |
| !! | ACAAAGTTGATTTATTTCCT+CGG | + | chr1.3:5738924-5738943 | None:intergenic | 25.0% |
| !!! | AGAATGGATTTTGACATTTT+TGG | - | chr1.3:5739204-5739223 | MS.gene051626:intron | 25.0% |
| !!! | GATCAAATTTTAACAGTTCA+TGG | - | chr1.3:5739874-5739893 | MS.gene051626:CDS | 25.0% |
| !!! | GTCACATACATATTTTGATT+CGG | - | chr1.3:5740366-5740385 | MS.gene051626:CDS | 25.0% |
| !!! | TAGTAGTCTTTATTTTACTC+AGG | - | chr1.3:5739683-5739702 | MS.gene051626:intron | 25.0% |
| !!! | TTCCATTTATGATGTTGTTT+TGG | + | chr1.3:5738186-5738205 | None:intergenic | 25.0% |
| AAACATACACTAATTCGATC+AGG | + | chr1.3:5739140-5739159 | None:intergenic | 30.0% | |
| AAGTTCATTGCTACAATTTG+AGG | + | chr1.3:5738620-5738639 | None:intergenic | 30.0% | |
| AATGAATAGCAATGAATGAG+TGG | + | chr1.3:5738151-5738170 | None:intergenic | 30.0% | |
| AATGGAATTCCAATACTTTC+TGG | - | chr1.3:5738199-5738218 | MS.gene051626:CDS | 30.0% | |
| ACTGTTAAAATTTGATCCCA+TGG | + | chr1.3:5739871-5739890 | None:intergenic | 30.0% | |
| AGCAAACATATTCTTTCCAT+GGG | - | chr1.3:5739852-5739871 | MS.gene051626:CDS | 30.0% | |
| AGGCTAAAAATCAATTGTAG+AGG | + | chr1.3:5739282-5739301 | None:intergenic | 30.0% | |
| ATGGAACTTTCTATGAGTTT+AGG | - | chr1.3:5738757-5738776 | MS.gene051626:intron | 30.0% | |
| CAAGGATTAAGTTATGTCTA+CGG | + | chr1.3:5740544-5740563 | None:intergenic | 30.0% | |
| CAGTCAATATAGTCAATGTT+TGG | - | chr1.3:5739710-5739729 | MS.gene051626:intron | 30.0% | |
| CTTCATTCATTCAAAAGCAA+TGG | - | chr1.3:5739928-5739947 | MS.gene051626:CDS | 30.0% | |
| CTTGATGAGATAAACTATTC+GGG | - | chr1.3:5738883-5738902 | MS.gene051626:CDS | 30.0% | |
| GATAAAAAACCTTGATACTG+TGG | + | chr1.3:5740132-5740151 | None:intergenic | 30.0% | |
| GCAAATTGTATGATGTTGAA+TGG | - | chr1.3:5739533-5739552 | MS.gene051626:intron | 30.0% | |
| TAGCAAACATATTCTTTCCA+TGG | - | chr1.3:5739851-5739870 | MS.gene051626:CDS | 30.0% | |
| TATCTTGATCCTAATATTGC+CGG | + | chr1.3:5738808-5738827 | None:intergenic | 30.0% | |
| TGAAAAGGAAAGATCAGTTA+TGG | - | chr1.3:5739964-5739983 | MS.gene051626:CDS | 30.0% | |
| TGGAACTTTCTATGAGTTTA+GGG | - | chr1.3:5738758-5738777 | MS.gene051626:intron | 30.0% | |
| TTGATTGAGCGATAAATTCA+AGG | + | chr1.3:5739302-5739321 | None:intergenic | 30.0% | |
| ! | AAGTGAACAATTTTGCATCT+AGG | + | chr1.3:5739437-5739456 | None:intergenic | 30.0% |
| ! | ATATTTATGGTTGGTTGTGT+AGG | - | chr1.3:5740656-5740675 | MS.gene051626:CDS | 30.0% |
| ! | CCTGACTATTAATTTGGAAT+CGG | + | chr1.3:5740416-5740435 | None:intergenic | 30.0% |
| ! | GATAAGGGCTACATTTTTAA+TGG | + | chr1.3:5740590-5740609 | None:intergenic | 30.0% |
| ! | GTCATTAATTTGAGATCGAA+TGG | + | chr1.3:5740481-5740500 | None:intergenic | 30.0% |
| ! | TCATTTGTTACATCACAACA+TGG | - | chr1.3:5738283-5738302 | MS.gene051626:intron | 30.0% |
| ! | TCGAATTAGTGTATGTTTTC+TGG | - | chr1.3:5739142-5739161 | MS.gene051626:CDS | 30.0% |
| !!! | TAGTCTTTATTTTACTCAGG+TGG | - | chr1.3:5739686-5739705 | MS.gene051626:intron | 30.0% |
| !!! | TGATGTTGTTTTGGTTGTTA+AGG | + | chr1.3:5738177-5738196 | None:intergenic | 30.0% |
| AAACATCCAATCACGTAGAA+CGG | + | chr1.3:5740024-5740043 | None:intergenic | 35.0% | |
| AAAGCTCAAGAGAGTAATGT+TGG | - | chr1.3:5738499-5738518 | MS.gene051626:intron | 35.0% | |
| AAAGGAAAGATCAGTTATGG+AGG | - | chr1.3:5739967-5739986 | MS.gene051626:CDS | 35.0% | |
| AAATGCTTCTCTGCATCTTT+AGG | + | chr1.3:5740302-5740321 | None:intergenic | 35.0% | |
| AACGGTTTCTCGACTATATA+AGG | - | chr1.3:5739812-5739831 | MS.gene051626:intron | 35.0% | |
| AAGTTACACACAAGGATCAA+AGG | - | chr1.3:5739603-5739622 | MS.gene051626:intron | 35.0% | |
| AAGTTCCATACTACTACATG+AGG | + | chr1.3:5738746-5738765 | None:intergenic | 35.0% | |
| AATTCGATCAGGACTATGAA+CGG | + | chr1.3:5739129-5739148 | None:intergenic | 35.0% | |
| ACAATGATGTGATGCATTTC+AGG | - | chr1.3:5740273-5740292 | MS.gene051626:CDS | 35.0% | |
| ACATTCCAAAGTTACACACA+AGG | - | chr1.3:5739595-5739614 | MS.gene051626:intron | 35.0% | |
| AGAAAAGCTTGTCGAAATGA+AGG | - | chr1.3:5740756-5740775 | MS.gene051626:CDS | 35.0% | |
| AGATCATTGATGAATGCATG+TGG | - | chr1.3:5740245-5740264 | MS.gene051626:CDS | 35.0% | |
| ATTAATAGTCAGGTCAGGAT+CGG | - | chr1.3:5740423-5740442 | MS.gene051626:CDS | 35.0% | |
| ATTTATTCCTATCCTTCGCT+TGG | + | chr1.3:5738956-5738975 | None:intergenic | 35.0% | |
| CCGATTCCAAATTAATAGTC+AGG | - | chr1.3:5740413-5740432 | MS.gene051626:CDS | 35.0% | |
| GACTTAACTCATAGCATGAA+TGG | - | chr1.3:5738697-5738716 | MS.gene051626:intron | 35.0% | |
| GCATACATTTCCTCAATCAA+TGG | + | chr1.3:5740723-5740742 | None:intergenic | 35.0% | |
| GTATTTCCTGAATTACAGCA+AGG | + | chr1.3:5738831-5738850 | None:intergenic | 35.0% | |
| TAGATAATACTTACGGATGG+AGG | + | chr1.3:5740055-5740074 | None:intergenic | 35.0% | |
| TAGCATGAATGGAACAAGAT+CGG | - | chr1.3:5738708-5738727 | MS.gene051626:intron | 35.0% | |
| TATATAAGGACTTGAGAGAG+AGG | - | chr1.3:5739826-5739845 | MS.gene051626:intron | 35.0% | |
| TCCAAATTAATAGTCAGGTC+AGG | - | chr1.3:5740418-5740437 | MS.gene051626:CDS | 35.0% | |
| TCCTGACCTGACTATTAATT+TGG | + | chr1.3:5740422-5740441 | None:intergenic | 35.0% | |
| TTAAGTTATGTCTACGGATC+CGG | + | chr1.3:5740538-5740557 | None:intergenic | 35.0% | |
| TTGATCCTTGTGTGTAACTT+TGG | + | chr1.3:5739603-5739622 | None:intergenic | 35.0% | |
| TTGTTACATCACAACATGGA+AGG | - | chr1.3:5738287-5738306 | MS.gene051626:intron | 35.0% | |
| TTTACATGCAACACACTCTT+AGG | - | chr1.3:5739354-5739373 | MS.gene051626:intron | 35.0% | |
| ! | AAGATACCTTGCTGTAATTC+AGG | - | chr1.3:5738822-5738841 | MS.gene051626:intron | 35.0% |
| ! | GTTGAAAACATGTGGTTTTC+CGG | - | chr1.3:5740516-5740535 | MS.gene051626:CDS | 35.0% |
| ! | TAAACATGTCAAGTTTTCGC+CGG | - | chr1.3:5738786-5738805 | MS.gene051626:intron | 35.0% |
| ! | TCTGGTTTCATTCTTGAACA+TGG | - | chr1.3:5739160-5739179 | MS.gene051626:CDS | 35.0% |
| ! | TTTGATGATTGCCATCCATT+TGG | + | chr1.3:5738565-5738584 | None:intergenic | 35.0% |
| ! | TTTTCAGTTCCTGCTAGAAT+TGG | - | chr1.3:5738355-5738374 | MS.gene051626:intron | 35.0% |
| !! | ATGCTGATTCTTCATTGCAA+AGG | - | chr1.3:5739004-5739023 | MS.gene051626:CDS | 35.0% |
| !! | GGATCGGTTAAAACTGATTT+TGG | - | chr1.3:5740439-5740458 | MS.gene051626:CDS | 35.0% |
| !!! | AGGTTTTTTATCCCCAATTC+CGG | - | chr1.3:5740140-5740159 | MS.gene051626:CDS | 35.0% |
| !!! | TAATCCTTGCTTGTTTTGAG+AGG | - | chr1.3:5740555-5740574 | MS.gene051626:CDS | 35.0% |
| ACAACATGGAAGGACTATTG+TGG | - | chr1.3:5738297-5738316 | MS.gene051626:intron | 40.0% | |
| ACAAGCCTCATGTAGTAGTA+TGG | - | chr1.3:5738738-5738757 | MS.gene051626:intron | 40.0% | |
| ACTCTTGATGCTTCTACAGA+TGG | - | chr1.3:5739053-5739072 | MS.gene051626:CDS | 40.0% | |
| AGAACGGAAACAGATCTTTC+TGG | + | chr1.3:5740008-5740027 | None:intergenic | 40.0% | |
| AGCATGAATGGAACAAGATC+GGG | - | chr1.3:5738709-5738728 | MS.gene051626:intron | 40.0% | |
| AGTTCCTCTCAAAACAAGCA+AGG | + | chr1.3:5740562-5740581 | None:intergenic | 40.0% | |
| ATAGGGAACATCGATCCAAA+TGG | - | chr1.3:5738547-5738566 | MS.gene051626:intron | 40.0% | |
| ATCACCAAAAGTTGCACACA+AGG | + | chr1.3:5738452-5738471 | None:intergenic | 40.0% | |
| GCAAAGTGTGCATGTATTTG+TGG | + | chr1.3:5739786-5739805 | None:intergenic | 40.0% | |
| GGAATTCCAATACTTTCTGG+TGG | - | chr1.3:5738202-5738221 | MS.gene051626:CDS | 40.0% | |
| GGTTTATAAATGCGCGTGTT+CGG | - | chr1.3:5740688-5740707 | MS.gene051626:CDS | 40.0% | |
| GTACACTGCTCAAATGAACA+TGG | - | chr1.3:5738075-5738094 | MS.gene051626:CDS | 40.0% | |
| TAACAGTTCATGGTCAGAAG+AGG | - | chr1.3:5739884-5739903 | MS.gene051626:CDS | 40.0% | |
| TCACCAAAAGTTGCACACAA+GGG | + | chr1.3:5738451-5738470 | None:intergenic | 40.0% | |
| TCATGTCATATTCGCCGATA+GGG | - | chr1.3:5738530-5738549 | MS.gene051626:intron | 40.0% | |
| TCTTGAAGACCAATTCTAGC+AGG | + | chr1.3:5738367-5738386 | None:intergenic | 40.0% | |
| TGGTTGTGTAGGTATCAAAC+TGG | - | chr1.3:5740667-5740686 | MS.gene051626:CDS | 40.0% | |
| TTCATGGTCAGAAGAGGATA+AGG | - | chr1.3:5739890-5739909 | MS.gene051626:CDS | 40.0% | |
| TTCATGTCATATTCGCCGAT+AGG | - | chr1.3:5738529-5738548 | MS.gene051626:intron | 40.0% | |
| TTTGGATCGATGTTCCCTAT+CGG | + | chr1.3:5738547-5738566 | None:intergenic | 40.0% | |
| ! | AAGTTTTCGCCGGCAATATT+AGG | - | chr1.3:5738796-5738815 | MS.gene051626:intron | 40.0% |
| ! | GAGATAAACTATTCGGGTTC+TGG | - | chr1.3:5738889-5738908 | MS.gene051626:CDS | 40.0% |
| ! | GCTATGGAAACCATTGATTG+AGG | - | chr1.3:5740710-5740729 | MS.gene051626:CDS | 40.0% |
| ! | TGCACACTTTGCTGTCAAAA+CGG | - | chr1.3:5739794-5739813 | MS.gene051626:intron | 40.0% |
| ! | TGTTCTCCACCAGAAAGTAT+TGG | + | chr1.3:5738211-5738230 | None:intergenic | 40.0% |
| AACACAACCAAGCGAAGGAT+AGG | - | chr1.3:5738946-5738965 | MS.gene051626:CDS | 45.0% | |
| ACTGCTCAAATGAACATGGC+TGG | - | chr1.3:5738079-5738098 | MS.gene051626:CDS | 45.0% | |
| ATGAGAGCAGTGAAAGAAGC+AGG | - | chr1.3:5740784-5740803 | MS.gene051626:CDS | 45.0% | |
| CACCAAAAGTTGCACACAAG+GGG | + | chr1.3:5738450-5738469 | None:intergenic | 45.0% | |
| CTGTTTCCGTTCTACGTGAT+TGG | - | chr1.3:5740015-5740034 | MS.gene051626:CDS | 45.0% | |
| CTTGCAACATCACCAACTTC+AGG | - | chr1.3:5738649-5738668 | MS.gene051626:intron | 45.0% | |
| GAATGGAACAAGATCGGGTT+TGG | - | chr1.3:5738714-5738733 | MS.gene051626:intron | 45.0% | |
| GGAACATCGATCCAAATGGA+TGG | - | chr1.3:5738551-5738570 | MS.gene051626:CDS | 45.0% | |
| GGGCTCTTCAACAGTTGAAA+AGG | - | chr1.3:5739949-5739968 | MS.gene051626:CDS | 45.0% | |
| GGTCAATGCTCAGAGATTAG+TGG | - | chr1.3:5738670-5738689 | MS.gene051626:intron | 45.0% | |
| TCAGCATAAGCCTCTGACAT+AGG | + | chr1.3:5738991-5739010 | None:intergenic | 45.0% | |
| ! | AACCCCTTGTGTGCAACTTT+TGG | - | chr1.3:5738445-5738464 | MS.gene051626:intron | 45.0% |
| ! | TATTCGGGTTCTGGTGTTAG+AGG | - | chr1.3:5738898-5738917 | MS.gene051626:CDS | 45.0% |
| !! | AAGTGGGTTGACTAGAAGTC+AGG | - | chr1.3:5740334-5740353 | MS.gene051626:CDS | 45.0% |
| !! | TCTGAGCATTGACCTGAAGT+TGG | + | chr1.3:5738664-5738683 | None:intergenic | 45.0% |
| ATCAGTTATGGAGGCCCCAA+AGG | - | chr1.3:5739976-5739995 | MS.gene051626:CDS | 50.0% | |
| CGATGAGAGTCCTATGTCAG+AGG | - | chr1.3:5738978-5738997 | MS.gene051626:CDS | 50.0% | |
| CGATTGCAGCCACAGTATCA+AGG | - | chr1.3:5740120-5740139 | MS.gene051626:CDS | 50.0% | |
| TAAATGCGCGTGTTCGGCTA+TGG | - | chr1.3:5740694-5740713 | MS.gene051626:CDS | 50.0% | |
| TCAGTTATGGAGGCCCCAAA+GGG | - | chr1.3:5739977-5739996 | MS.gene051626:CDS | 50.0% | |
| TGTCGAACACAACCAAGCGA+AGG | - | chr1.3:5738941-5738960 | MS.gene051626:CDS | 50.0% | |
| ! | ATCTTTCTGGCAAGCCCCTT+TGG | + | chr1.3:5739995-5740014 | None:intergenic | 50.0% |
| ! | TCTTTCTGGCAAGCCCCTTT+GGG | + | chr1.3:5739994-5740013 | None:intergenic | 50.0% |
| AGCTGATGCAGCCGGAATTG+GGG | + | chr1.3:5740154-5740173 | None:intergenic | 55.0% | |
| CAGCTGATGCAGCCGGAATT+GGG | + | chr1.3:5740155-5740174 | None:intergenic | 55.0% | |
| CAGTTATGGAGGCCCCAAAG+GGG | - | chr1.3:5739978-5739997 | MS.gene051626:CDS | 55.0% | |
| CGAAATGCAGCTGATGCAGC+CGG | + | chr1.3:5740162-5740181 | None:intergenic | 55.0% | |
| ! | CTTTCTGGCAAGCCCCTTTG+GGG | + | chr1.3:5739993-5740012 | None:intergenic | 55.0% |
| GCAGCTGATGCAGCCGGAAT+TGG | + | chr1.3:5740156-5740175 | None:intergenic | 60.0% | |
| ! | GGTTCTGGTGTTAGAGGCCG+AGG | - | chr1.3:5738904-5738923 | MS.gene051626:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5738061 | 5740842 | 5738061 | ID=MS.gene051626 |
| chr1.3 | mRNA | 5738061 | 5740842 | 5738061 | ID=MS.gene051626.t1;Parent=MS.gene051626 |
| chr1.3 | exon | 5739829 | 5740842 | 5739829 | ID=MS.gene051626.t1.exon1;Parent=MS.gene051626.t1 |
| chr1.3 | CDS | 5739829 | 5740842 | 5739829 | ID=cds.MS.gene051626.t1;Parent=MS.gene051626.t1 |
| chr1.3 | exon | 5738843 | 5739198 | 5738843 | ID=MS.gene051626.t1.exon2;Parent=MS.gene051626.t1 |
| chr1.3 | CDS | 5738843 | 5739198 | 5738843 | ID=cds.MS.gene051626.t1;Parent=MS.gene051626.t1 |
| chr1.3 | exon | 5738548 | 5738608 | 5738548 | ID=MS.gene051626.t1.exon3;Parent=MS.gene051626.t1 |
| chr1.3 | CDS | 5738548 | 5738608 | 5738548 | ID=cds.MS.gene051626.t1;Parent=MS.gene051626.t1 |
| chr1.3 | exon | 5738061 | 5738225 | 5738061 | ID=MS.gene051626.t1.exon4;Parent=MS.gene051626.t1 |
| chr1.3 | CDS | 5738061 | 5738225 | 5738061 | ID=cds.MS.gene051626.t1;Parent=MS.gene051626.t1 |
| Gene Sequence |
| Protein sequence |
