Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81975.t1 | RHN69578.1 | 95 | 218 | 4 | 3 | 1 | 211 | 1 | 218 | 9.50E-86 | 326.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81975.t1 | Q8LGD5 | 44.4 | 189 | 76 | 6 | 11 | 194 | 16 | 180 | 1.8e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81975.t1 | G7J659 | 95.0 | 218 | 4 | 3 | 1 | 211 | 1 | 218 | 6.8e-86 | 326.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene81975 | 0.834232 | 3.38E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene81975 | 0.806518 | 7.91E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene81975 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene81975 | 0.805234 | 1.47E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene81975 | 0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene053561 | MS.gene81975 | 0.838113 | 3.49E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene81975 | 0.812296 | 4.55E-51 | -1.69E-46 |
| MS.gene057289 | MS.gene81975 | -0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene81975 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene81975 | 0.842364 | 2.71E-58 | -1.69E-46 |
| MS.gene059694 | MS.gene81975 | 0.804024 | 2.63E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene81975 | 0.808631 | 2.82E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81975.t1 | MTR_3g090350 | 96.774 | 248 | 1 | 3 | 1 | 241 | 1 | 248 | 2.86e-169 | 466 |
| MS.gene81975.t1 | MTR_1g028910 | 44.583 | 240 | 81 | 7 | 6 | 239 | 6 | 199 | 6.75e-41 | 139 |
| MS.gene81975.t1 | MTR_8g093390 | 40.323 | 248 | 97 | 12 | 5 | 239 | 4 | 213 | 8.71e-38 | 131 |
| MS.gene81975.t1 | MTR_8g093335 | 40.323 | 248 | 97 | 12 | 5 | 239 | 4 | 213 | 8.71e-38 | 131 |
| MS.gene81975.t1 | MTR_1g028920 | 57.831 | 83 | 24 | 3 | 4 | 82 | 3 | 78 | 4.47e-21 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81975.t1 | AT1G21326 | 37.008 | 254 | 116 | 8 | 11 | 240 | 4 | 237 | 2.80e-26 | 102 |
| MS.gene81975.t1 | AT3G18690 | 39.367 | 221 | 87 | 8 | 14 | 229 | 19 | 197 | 1.05e-23 | 95.5 |
| MS.gene81975.t1 | AT1G21320 | 36.098 | 205 | 84 | 6 | 11 | 184 | 4 | 192 | 1.81e-18 | 83.6 |
| MS.gene81975.t1 | AT1G21320 | 36.098 | 205 | 84 | 6 | 11 | 184 | 4 | 192 | 2.85e-18 | 83.6 |
Find 72 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTATTCAACTATTTCTT+AGG | 0.112026 | 3.2:+76501279 | MS.gene81975:CDS |
| TCACTAGTAATACTTGTTAT+TGG | 0.246006 | 3.2:-76500973 | None:intergenic |
| GAGACGGTGTAGATTATAAT+TGG | 0.248090 | 3.2:-76500742 | None:intergenic |
| GAGAAAGCTATGTCTCCTTT+AGG | 0.288459 | 3.2:+76500922 | MS.gene81975:CDS |
| GGACCTTGAAGTTCTCTTCT+TGG | 0.290039 | 3.2:-76500616 | None:intergenic |
| GATCTTCCTGTAGGAATGTC+TGG | 0.350042 | 3.2:-76500592 | None:intergenic |
| AAATCAATAGAAGGAGTAAT+AGG | 0.360331 | 3.2:-76501261 | None:intergenic |
| AGGAAGTTGTTGAACATGTT+TGG | 0.384511 | 3.2:-76501147 | None:intergenic |
| AGAAAGCTATGTCTCCTTTA+GGG | 0.426920 | 3.2:+76500923 | MS.gene81975:CDS |
| ATTTATTCAACTATTTCTTA+GGG | 0.435993 | 3.2:+76501280 | MS.gene81975:CDS |
| ATAGGTGAAACAAAATTAGA+AGG | 0.438530 | 3.2:-76501243 | None:intergenic |
| GGTGTGGTGTGGATTACCTT+AGG | 0.449367 | 3.2:-76500766 | None:intergenic |
| CTTCTTGGTGATCTTCCTGT+AGG | 0.456063 | 3.2:-76500601 | None:intergenic |
| CGAGGAGGTGGACGAGGAGG+AGG | 0.458285 | 3.2:-76500827 | None:intergenic |
| TGTTGCTGCTGCGGCGCCAA+TGG | 0.459417 | 3.2:-76500691 | None:intergenic |
| CAAACACAATTGATGAATCA+TGG | 0.462976 | 3.2:+76501024 | MS.gene81975:CDS |
| TAGTTGAATAAATCAATAGA+AGG | 0.468934 | 3.2:-76501270 | None:intergenic |
| GGAGATAGTGAAGCCGGTCC+CGG | 0.477212 | 3.2:-76501087 | None:intergenic |
| AACCTCGTCCAACGTCTCAC+TGG | 0.478033 | 3.2:+76500802 | MS.gene81975:CDS |
| AGAGGAAACATGATGTTTCA+AGG | 0.483946 | 3.2:+76501054 | MS.gene81975:CDS |
| GTGTGGTGTGGATTACCTTA+GGG | 0.486154 | 3.2:-76500765 | None:intergenic |
| ATTGATCCTTTCCGCGGGGA+TGG | 0.486778 | 3.2:+76500865 | MS.gene81975:CDS |
| ATGGTGGCATAACGCGCCGC+GGG | 0.509887 | 3.2:-76500898 | None:intergenic |
| TCACCAAGAAGAGAACTTCA+AGG | 0.519379 | 3.2:+76500613 | MS.gene81975:CDS |
| TGCTGCTGCGGCGCCAATGG+TGG | 0.524978 | 3.2:-76500688 | None:intergenic |
| GAGTCTTTGTGTATTCTAAG+AGG | 0.532916 | 3.2:-76500649 | None:intergenic |
| TTGTGTATTCTAAGAGGTGT+AGG | 0.534406 | 3.2:-76500643 | None:intergenic |
| TTTCTACCACTATGAAGTGC+AGG | 0.535371 | 3.2:-76501183 | None:intergenic |
| CAATTCCCAGACATTCCTAC+AGG | 0.536016 | 3.2:+76500586 | MS.gene81975:CDS |
| TGAAGACGAGGAGGTGGACG+AGG | 0.538450 | 3.2:-76500833 | None:intergenic |
| AACATGTTTGGATCCGAAGA+TGG | 0.542342 | 3.2:-76501135 | None:intergenic |
| GACGAGGTTCATGAAGTCAC+CGG | 0.543564 | 3.2:-76500788 | None:intergenic |
| CAAATATTGATCCTTTCCGC+GGG | 0.544079 | 3.2:+76500860 | MS.gene81975:CDS |
| GTTCATGAAGTCACCGGGTG+TGG | 0.544703 | 3.2:-76500782 | None:intergenic |
| TGATGATGAAGACGAGGAGG+TGG | 0.545268 | 3.2:-76500839 | None:intergenic |
| TTAAGTCCTGCACTTCATAG+TGG | 0.549789 | 3.2:+76501177 | MS.gene81975:CDS |
| ATCTTCCTGTAGGAATGTCT+GGG | 0.550841 | 3.2:-76500591 | None:intergenic |
| ATGAATCATGGAGTAGAGAG+AGG | 0.552023 | 3.2:+76501036 | MS.gene81975:CDS |
| GAAACAAAATTAGAAGGACT+TGG | 0.555617 | 3.2:-76501237 | None:intergenic |
| CGGTGTAGATTATAATTGGT+TGG | 0.555935 | 3.2:-76500738 | None:intergenic |
| GAGGAAACATGATGTTTCAA+GGG | 0.560217 | 3.2:+76501055 | MS.gene81975:CDS |
| TGTTGTTGTTGTTGCTGCTG+CGG | 0.561130 | 3.2:-76500700 | None:intergenic |
| ATCCAGTGAGACGTTGGACG+AGG | 0.565433 | 3.2:-76500804 | None:intergenic |
| GGAATTGGAGATAGTGAAGC+CGG | 0.565624 | 3.2:-76501093 | None:intergenic |
| AATCTACACCGTCTCCCCTA+AGG | 0.567138 | 3.2:+76500750 | MS.gene81975:CDS |
| AAGGTAATCCACACCACACC+CGG | 0.567522 | 3.2:+76500769 | MS.gene81975:CDS |
| ATGTAATAAGTGACATGGAA+GGG | 0.573767 | 3.2:+76500995 | MS.gene81975:CDS |
| TCAAATATTGATCCTTTCCG+CGG | 0.581682 | 3.2:+76500859 | MS.gene81975:CDS |
| GTGCAGGACTTAAATCATGA+AGG | 0.587314 | 3.2:-76501167 | None:intergenic |
| TGAAGTCACCGGGTGTGGTG+TGG | 0.588782 | 3.2:-76500777 | None:intergenic |
| CAAAATCAAGAAACCACCAT+TGG | 0.593308 | 3.2:+76500675 | MS.gene81975:CDS |
| ATTGTTCCATCCCCGCGGAA+AGG | 0.594293 | 3.2:-76500871 | None:intergenic |
| GTGGATTACCTTAGGGGAGA+CGG | 0.596921 | 3.2:-76500758 | None:intergenic |
| AGGAGGATCCAGTGAGACGT+TGG | 0.603439 | 3.2:-76500810 | None:intergenic |
| CATGGTGGCATAACGCGCCG+CGG | 0.605256 | 3.2:-76500899 | None:intergenic |
| ATTCTAAGAGGTGTAGGACG+TGG | 0.611632 | 3.2:-76500637 | None:intergenic |
| GATGTAATAAGTGACATGGA+AGG | 0.613311 | 3.2:+76500994 | MS.gene81975:CDS |
| TGGTGGCATAACGCGCCGCG+GGG | 0.623818 | 3.2:-76500897 | None:intergenic |
| AGACGAGGAGGTGGACGAGG+AGG | 0.631145 | 3.2:-76500830 | None:intergenic |
| ACGAGGTTCATGAAGTCACC+GGG | 0.632122 | 3.2:-76500787 | None:intergenic |
| TAGATTATAATTGGTTGGCG+CGG | 0.634687 | 3.2:-76500733 | None:intergenic |
| GGTGGCATAACGCGCCGCGG+GGG | 0.638082 | 3.2:-76500896 | None:intergenic |
| TAGTGATGTAATAAGTGACA+TGG | 0.644199 | 3.2:+76500990 | MS.gene81975:CDS |
| ATGTTTGGATCCGAAGATGG+TGG | 0.647910 | 3.2:-76501132 | None:intergenic |
| CGCGGCGCGTTATGCCACCA+TGG | 0.654579 | 3.2:+76500900 | MS.gene81975:CDS |
| AGGAGACATAGCTTTCTCCA+TGG | 0.670650 | 3.2:-76500917 | None:intergenic |
| ATTTGATGATGAAGACGAGG+AGG | 0.673773 | 3.2:-76500842 | None:intergenic |
| TGTGGTGTGGATTACCTTAG+GGG | 0.679590 | 3.2:-76500764 | None:intergenic |
| AGACATAGCTTTCTCCATGG+TGG | 0.695038 | 3.2:-76500914 | None:intergenic |
| AATATTTGATGATGAAGACG+AGG | 0.706902 | 3.2:-76500845 | None:intergenic |
| AAATATTGATCCTTTCCGCG+GGG | 0.729506 | 3.2:+76500861 | MS.gene81975:CDS |
| GGGATATTGTTCCATCCCCG+CGG | 0.741668 | 3.2:-76500876 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTCAACTATTTCTTA+GGG | + | chr3.2:76501280-76501299 | MS.gene81975:CDS | 15.0% |
| !! | TAGTTGAATAAATCAATAGA+AGG | - | chr3.2:76501273-76501292 | None:intergenic | 20.0% |
| !!! | GATTTATTCAACTATTTCTT+AGG | + | chr3.2:76501279-76501298 | MS.gene81975:CDS | 20.0% |
| ! | AAATCAATAGAAGGAGTAAT+AGG | - | chr3.2:76501264-76501283 | None:intergenic | 25.0% |
| ! | ATAGGTGAAACAAAATTAGA+AGG | - | chr3.2:76501246-76501265 | None:intergenic | 25.0% |
| ! | GAGAAAAAATTAGAAGGAAT+TGG | - | chr3.2:76501111-76501130 | None:intergenic | 25.0% |
| !! | TCATAGTGGTAGAAATTTTA+TGG | + | chr3.2:76501191-76501210 | MS.gene81975:CDS | 25.0% |
| !!! | TCACTAGTAATACTTGTTAT+TGG | - | chr3.2:76500976-76500995 | None:intergenic | 25.0% |
| ATGTAATAAGTGACATGGAA+GGG | + | chr3.2:76500995-76501014 | MS.gene81975:CDS | 30.0% | |
| CAAACACAATTGATGAATCA+TGG | + | chr3.2:76501024-76501043 | MS.gene81975:CDS | 30.0% | |
| GAAACAAAATTAGAAGGACT+TGG | - | chr3.2:76501240-76501259 | None:intergenic | 30.0% | |
| TAGTGATGTAATAAGTGACA+TGG | + | chr3.2:76500990-76501009 | MS.gene81975:CDS | 30.0% | |
| ! | AGTGGTAGAAATTTTATGGA+AGG | + | chr3.2:76501195-76501214 | MS.gene81975:CDS | 30.0% |
| !! | AATATTTGATGATGAAGACG+AGG | - | chr3.2:76500848-76500867 | None:intergenic | 30.0% |
| !!! | TGTTGTTGTTTTTTCCCTAA+AGG | - | chr3.2:76500940-76500959 | None:intergenic | 30.0% |
| AGAAAGCTATGTCTCCTTTA+GGG | + | chr3.2:76500923-76500942 | MS.gene81975:CDS | 35.0% | |
| AGAGGAAACATGATGTTTCA+AGG | + | chr3.2:76501054-76501073 | MS.gene81975:CDS | 35.0% | |
| AGGAAGTTGTTGAACATGTT+TGG | - | chr3.2:76501150-76501169 | None:intergenic | 35.0% | |
| CAAAATCAAGAAACCACCAT+TGG | + | chr3.2:76500675-76500694 | MS.gene81975:CDS | 35.0% | |
| CGGTGTAGATTATAATTGGT+TGG | - | chr3.2:76500741-76500760 | None:intergenic | 35.0% | |
| GAGACGGTGTAGATTATAAT+TGG | - | chr3.2:76500745-76500764 | None:intergenic | 35.0% | |
| GAGGAAACATGATGTTTCAA+GGG | + | chr3.2:76501055-76501074 | MS.gene81975:CDS | 35.0% | |
| GAGTCTTTGTGTATTCTAAG+AGG | - | chr3.2:76500652-76500671 | None:intergenic | 35.0% | |
| GATGTAATAAGTGACATGGA+AGG | + | chr3.2:76500994-76501013 | MS.gene81975:CDS | 35.0% | |
| TAGATTATAATTGGTTGGCG+CGG | - | chr3.2:76500736-76500755 | None:intergenic | 35.0% | |
| TCAAATATTGATCCTTTCCG+CGG | + | chr3.2:76500859-76500878 | MS.gene81975:CDS | 35.0% | |
| ! | GGTAGAAATTTTATGGAAGG+TGG | + | chr3.2:76501198-76501217 | MS.gene81975:CDS | 35.0% |
| ! | GTTTCAAGGGATTTTATCTC+CGG | + | chr3.2:76501068-76501087 | MS.gene81975:CDS | 35.0% |
| ! | TTGTGTATTCTAAGAGGTGT+AGG | - | chr3.2:76500646-76500665 | None:intergenic | 35.0% |
| ! | TTTCAAGGGATTTTATCTCC+GGG | + | chr3.2:76501069-76501088 | MS.gene81975:CDS | 35.0% |
| AAATATTGATCCTTTCCGCG+GGG | + | chr3.2:76500861-76500880 | MS.gene81975:CDS | 40.0% | |
| AACATGTTTGGATCCGAAGA+TGG | - | chr3.2:76501138-76501157 | None:intergenic | 40.0% | |
| ATCTTCCTGTAGGAATGTCT+GGG | - | chr3.2:76500594-76500613 | None:intergenic | 40.0% | |
| ATGAATCATGGAGTAGAGAG+AGG | + | chr3.2:76501036-76501055 | MS.gene81975:CDS | 40.0% | |
| CAAATATTGATCCTTTCCGC+GGG | + | chr3.2:76500860-76500879 | MS.gene81975:CDS | 40.0% | |
| GAGAAAGCTATGTCTCCTTT+AGG | + | chr3.2:76500922-76500941 | MS.gene81975:CDS | 40.0% | |
| GGTGGCGAGAAAAAATTAGA+AGG | - | chr3.2:76501117-76501136 | None:intergenic | 40.0% | |
| GTGCAGGACTTAAATCATGA+AGG | - | chr3.2:76501170-76501189 | None:intergenic | 40.0% | |
| TCACCAAGAAGAGAACTTCA+AGG | + | chr3.2:76500613-76500632 | MS.gene81975:CDS | 40.0% | |
| TTAAGTCCTGCACTTCATAG+TGG | + | chr3.2:76501177-76501196 | MS.gene81975:CDS | 40.0% | |
| TTTCTACCACTATGAAGTGC+AGG | - | chr3.2:76501186-76501205 | None:intergenic | 40.0% | |
| !! | ATTTGATGATGAAGACGAGG+AGG | - | chr3.2:76500845-76500864 | None:intergenic | 40.0% |
| !!! | TTTTTTCTCGCCACCATCTT+CGG | + | chr3.2:76501122-76501141 | MS.gene81975:CDS | 40.0% |
| AGACATAGCTTTCTCCATGG+TGG | - | chr3.2:76500917-76500936 | None:intergenic | 45.0% | |
| AGGAGACATAGCTTTCTCCA+TGG | - | chr3.2:76500920-76500939 | None:intergenic | 45.0% | |
| ATGTTTGGATCCGAAGATGG+TGG | - | chr3.2:76501135-76501154 | None:intergenic | 45.0% | |
| CAATTCCCAGACATTCCTAC+AGG | + | chr3.2:76500586-76500605 | MS.gene81975:CDS | 45.0% | |
| GATCTTCCTGTAGGAATGTC+TGG | - | chr3.2:76500595-76500614 | None:intergenic | 45.0% | |
| GGAATTGGAGATAGTGAAGC+CGG | - | chr3.2:76501096-76501115 | None:intergenic | 45.0% | |
| GGACCTTGAAGTTCTCTTCT+TGG | - | chr3.2:76500619-76500638 | None:intergenic | 45.0% | |
| ! | ATTCTAAGAGGTGTAGGACG+TGG | - | chr3.2:76500640-76500659 | None:intergenic | 45.0% |
| ! | CTTCTTGGTGATCTTCCTGT+AGG | - | chr3.2:76500604-76500623 | None:intergenic | 45.0% |
| ! | GTGTGGTGTGGATTACCTTA+GGG | - | chr3.2:76500768-76500787 | None:intergenic | 45.0% |
| ! | TGTGGTGTGGATTACCTTAG+GGG | - | chr3.2:76500767-76500786 | None:intergenic | 45.0% |
| ! | TGTTGTTGTTGTTGCTGCTG+CGG | - | chr3.2:76500703-76500722 | None:intergenic | 45.0% |
| AAGGTAATCCACACCACACC+CGG | + | chr3.2:76500769-76500788 | MS.gene81975:CDS | 50.0% | |
| AATCTACACCGTCTCCCCTA+AGG | + | chr3.2:76500750-76500769 | MS.gene81975:CDS | 50.0% | |
| ACGAGGTTCATGAAGTCACC+GGG | - | chr3.2:76500790-76500809 | None:intergenic | 50.0% | |
| GACGAGGTTCATGAAGTCAC+CGG | - | chr3.2:76500791-76500810 | None:intergenic | 50.0% | |
| ! | AGGGATTTTATCTCCGGGAC+CGG | + | chr3.2:76501074-76501093 | MS.gene81975:CDS | 50.0% |
| ! | GGTGTGGTGTGGATTACCTT+AGG | - | chr3.2:76500769-76500788 | None:intergenic | 50.0% |
| ! | GTGGATTACCTTAGGGGAGA+CGG | - | chr3.2:76500761-76500780 | None:intergenic | 50.0% |
| ! | TGATGATGAAGACGAGGAGG+TGG | - | chr3.2:76500842-76500861 | None:intergenic | 50.0% |
| AACCTCGTCCAACGTCTCAC+TGG | + | chr3.2:76500802-76500821 | MS.gene81975:CDS | 55.0% | |
| AGGAGGATCCAGTGAGACGT+TGG | - | chr3.2:76500813-76500832 | None:intergenic | 55.0% | |
| ATCCAGTGAGACGTTGGACG+AGG | - | chr3.2:76500807-76500826 | None:intergenic | 55.0% | |
| ATTGATCCTTTCCGCGGGGA+TGG | + | chr3.2:76500865-76500884 | MS.gene81975:CDS | 55.0% | |
| ATTGTTCCATCCCCGCGGAA+AGG | - | chr3.2:76500874-76500893 | None:intergenic | 55.0% | |
| GGATGGAACAATATCCCCCG+CGG | + | chr3.2:76500882-76500901 | MS.gene81975:CDS | 55.0% | |
| GGGATATTGTTCCATCCCCG+CGG | - | chr3.2:76500879-76500898 | None:intergenic | 55.0% | |
| GTTCATGAAGTCACCGGGTG+TGG | - | chr3.2:76500785-76500804 | None:intergenic | 55.0% | |
| GGAGATAGTGAAGCCGGTCC+CGG | - | chr3.2:76501090-76501109 | None:intergenic | 60.0% | |
| TGAAGACGAGGAGGTGGACG+AGG | - | chr3.2:76500836-76500855 | None:intergenic | 60.0% | |
| TGAAGTCACCGGGTGTGGTG+TGG | - | chr3.2:76500780-76500799 | None:intergenic | 60.0% | |
| AGACGAGGAGGTGGACGAGG+AGG | - | chr3.2:76500833-76500852 | None:intergenic | 65.0% | |
| ATGGTGGCATAACGCGCCGC+GGG | - | chr3.2:76500901-76500920 | None:intergenic | 65.0% | |
| CATGGTGGCATAACGCGCCG+CGG | - | chr3.2:76500902-76500921 | None:intergenic | 65.0% | |
| TGTTGCTGCTGCGGCGCCAA+TGG | - | chr3.2:76500694-76500713 | None:intergenic | 65.0% | |
| CGAGGAGGTGGACGAGGAGG+AGG | - | chr3.2:76500830-76500849 | None:intergenic | 70.0% | |
| CGCGGCGCGTTATGCCACCA+TGG | + | chr3.2:76500900-76500919 | MS.gene81975:CDS | 70.0% | |
| TGCTGCTGCGGCGCCAATGG+TGG | - | chr3.2:76500691-76500710 | None:intergenic | 70.0% | |
| TGGTGGCATAACGCGCCGCG+GGG | - | chr3.2:76500900-76500919 | None:intergenic | 70.0% | |
| GGTGGCATAACGCGCCGCGG+GGG | - | chr3.2:76500899-76500918 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 76500580 | 76501305 | 76500580 | ID=MS.gene81975 |
| chr3.2 | mRNA | 76500580 | 76501305 | 76500580 | ID=MS.gene81975.t1;Parent=MS.gene81975 |
| chr3.2 | exon | 76500580 | 76501305 | 76500580 | ID=MS.gene81975.t1.exon1;Parent=MS.gene81975.t1 |
| chr3.2 | CDS | 76500580 | 76501305 | 76500580 | ID=cds.MS.gene81975.t1;Parent=MS.gene81975.t1 |
| Gene Sequence |
| Protein sequence |
