Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82797.t1 | XP_013450730.1 | 87.6 | 573 | 66 | 3 | 1 | 569 | 1 | 572 | 5.10E-247 | 863.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82797.t1 | Q9RB36 | 48.6 | 222 | 105 | 2 | 350 | 564 | 9 | 228 | 1.1e-51 | 206.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82797.t1 | A0A072U4X6 | 87.6 | 573 | 66 | 3 | 1 | 569 | 1 | 572 | 3.7e-247 | 863.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene82797 | 0.809361 | 1.97E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene82797 | 0.80895 | 2.41E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene82797 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene82797 | 0.800976 | 1.12E-48 | -1.69E-46 |
| MS.gene050516 | MS.gene82797 | 0.805479 | 1.31E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene82797 | 0.836893 | 7.17E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene82797 | 0.833131 | 6.36E-56 | -1.69E-46 |
| MS.gene050787 | MS.gene82797 | 0.810328 | 1.22E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene82797 | 0.812131 | 4.95E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene82797 | 0.817844 | 2.67E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene82797 | 0.823839 | 1.12E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene82797 | 0.803558 | 3.29E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene82797 | 0.822939 | 1.81E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene82797 | 0.803902 | 2.79E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene82797 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene82797 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene82797 | 0.831819 | 1.34E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene82797 | 0.825414 | 4.75E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene82797 | 0.867044 | 1.83E-65 | -1.69E-46 |
| MS.gene060559 | MS.gene82797 | 0.810449 | 1.15E-50 | -1.69E-46 |
| MS.gene061071 | MS.gene82797 | 0.802128 | 6.50E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82797.t1 | MTR_6g004400 | 96.335 | 573 | 16 | 3 | 1 | 569 | 1 | 572 | 0.0 | 1132 |
| MS.gene82797.t1 | MTR_6g004400 | 95.423 | 437 | 15 | 3 | 1 | 433 | 1 | 436 | 0.0 | 849 |
| MS.gene82797.t1 | MTR_4g074160 | 30.729 | 192 | 99 | 5 | 352 | 543 | 89 | 246 | 2.52e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82797.t1 | AT5G14460 | 56.711 | 596 | 165 | 11 | 1 | 569 | 11 | 540 | 0.0 | 598 |
| MS.gene82797.t1 | AT3G57150 | 32.812 | 192 | 95 | 5 | 352 | 543 | 82 | 239 | 4.15e-19 | 91.3 |
Find 140 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATCACTCTGTGCGGATTT+TGG | 0.099638 | 6.1:-476828 | MS.gene82797:CDS |
| TCGCCTTGTCAAAGTGAAAA+AGG | 0.292477 | 6.1:-479932 | MS.gene82797:intron |
| TTAGCGGTTCGAGTGGGTTT+GGG | 0.298631 | 6.1:+482033 | None:intergenic |
| TCGAGTGGGTTTGGGGAGAT+TGG | 0.300053 | 6.1:+482041 | None:intergenic |
| GAAAGATAAGCATTATAAAA+TGG | 0.301531 | 6.1:-481704 | MS.gene82797:CDS |
| GGACGGGACTTCCTCATGTT+TGG | 0.332155 | 6.1:-481174 | MS.gene82797:CDS |
| GATAAGTTAAAGATAAGTTT+TGG | 0.332339 | 6.1:+476504 | None:intergenic |
| GAGAAAAGGAAAAGGGGAAG+AGG | 0.335131 | 6.1:-481303 | MS.gene82797:CDS |
| CTAATTCGAATGCGAATACT+AGG | 0.339685 | 6.1:-481576 | MS.gene82797:CDS |
| TTTAGCGGTTCGAGTGGGTT+TGG | 0.343333 | 6.1:+482032 | None:intergenic |
| CGAGTGGGTTTGGGGAGATT+GGG | 0.352164 | 6.1:+482042 | None:intergenic |
| AAGAGGTTGTTGTTAGGAAA+TGG | 0.356970 | 6.1:+482148 | None:intergenic |
| AGAAAAGGAAAAGGGGAAGA+GGG | 0.361980 | 6.1:-481302 | MS.gene82797:CDS |
| AAAACTCCTCCCTCCAATCC+TGG | 0.362557 | 6.1:-481990 | MS.gene82797:CDS |
| AGCTACGCTCTATGTCAAAT+TGG | 0.367629 | 6.1:+477783 | None:intergenic |
| GACGGGACTTCCTCATGTTT+GGG | 0.381101 | 6.1:-481173 | MS.gene82797:CDS |
| CGTTGGCAAGTCAACAAAAC+TGG | 0.388637 | 6.1:-479785 | MS.gene82797:CDS |
| ATCTGGAAGAGGTTGTTGTT+AGG | 0.388752 | 6.1:+482142 | None:intergenic |
| GGAGAATGGGTTGAAGAATC+TGG | 0.390566 | 6.1:+482125 | None:intergenic |
| GAACCGGGTCGGTTTAATTC+CGG | 0.390958 | 6.1:+481943 | None:intergenic |
| TCCTAATCAGTGTTTGGATC+AGG | 0.395285 | 6.1:-481656 | MS.gene82797:CDS |
| GTCCTCAACTCCACAACTTC+CGG | 0.401195 | 6.1:+481784 | None:intergenic |
| TGGACTTCATTCACAGTTTG+TGG | 0.401629 | 6.1:-479964 | MS.gene82797:CDS |
| AAGAGGAGGAAGAGAATGTA+TGG | 0.412854 | 6.1:-481862 | MS.gene82797:CDS |
| TTGAAGAGGGTATGGGGTTG+TGG | 0.418510 | 6.1:+482086 | None:intergenic |
| AGATATCAAGGGATGGTTAA+GGG | 0.418833 | 6.1:-479614 | MS.gene82797:CDS |
| CGATAAATTAACCACTGAAC+CGG | 0.422132 | 6.1:-481962 | MS.gene82797:CDS |
| TTAGAGTGACTTGTTCTAAA+GGG | 0.422161 | 6.1:-476860 | MS.gene82797:CDS |
| TGGGTTAGAGATACAGATAT+TGG | 0.425385 | 6.1:+482177 | None:intergenic |
| AGGAAACGGAGAGTGGAGAA+TGG | 0.425542 | 6.1:+482111 | None:intergenic |
| CAGATATCAAGGGATGGTTA+AGG | 0.429332 | 6.1:-479615 | MS.gene82797:CDS |
| TAAAGATGTTAGTGAGAAGA+AGG | 0.432499 | 6.1:-481269 | MS.gene82797:CDS |
| ATGGGGTTGTGGAGAGGAAA+CGG | 0.438870 | 6.1:+482097 | None:intergenic |
| AGTTCGTATTGAAGAGGGTA+TGG | 0.440279 | 6.1:+482078 | None:intergenic |
| ACTTACCAATTGAATCTCTT+CGG | 0.441065 | 6.1:+476661 | None:intergenic |
| GTGGAAAGAGAAAAGGAAAA+GGG | 0.446810 | 6.1:-481310 | MS.gene82797:CDS |
| TCGTCGTAACGAGGAACAAT+TGG | 0.452320 | 6.1:-481818 | MS.gene82797:CDS |
| GGAAACGGAGAGTGGAGAAT+GGG | 0.454803 | 6.1:+482112 | None:intergenic |
| AGCCATTGGATCAAGAGTTC+CGG | 0.455220 | 6.1:+479828 | None:intergenic |
| TAAGGGTTTGAATGTGAAGA+AGG | 0.455393 | 6.1:-481233 | MS.gene82797:CDS |
| GCCTGATCCAAACACTGATT+AGG | 0.455892 | 6.1:+481655 | None:intergenic |
| ATTTATCGTTGGCCCAGGAT+TGG | 0.458959 | 6.1:+481977 | None:intergenic |
| AGTTGAGGACTTTGCATAAG+AGG | 0.461084 | 6.1:-481771 | MS.gene82797:CDS |
| ACTCTTGATCCAATGGCTAC+TGG | 0.468893 | 6.1:-479823 | MS.gene82797:CDS |
| CGAATGCGAATACTAGGGTT+AGG | 0.473200 | 6.1:-481570 | MS.gene82797:CDS |
| GGAAAAGGGGAAGAGGGGTG+TGG | 0.481574 | 6.1:-481296 | MS.gene82797:CDS |
| GGTTGTTGATGATGATAAGT+TGG | 0.482315 | 6.1:-481512 | MS.gene82797:CDS |
| TTTAGAGTGACTTGTTCTAA+AGG | 0.482622 | 6.1:-476861 | MS.gene82797:CDS |
| TTCAGTGGTTAATTTATCGT+TGG | 0.484449 | 6.1:+481966 | None:intergenic |
| CGAATGAGAATGCGAATGCT+AGG | 0.484868 | 6.1:-481435 | MS.gene82797:CDS |
| TGGAAGATTGAAATTCGTCT+TGG | 0.489018 | 6.1:+477803 | None:intergenic |
| GAAAGGTGTGGAAAGAGAAA+AGG | 0.489304 | 6.1:-481317 | MS.gene82797:CDS |
| TGTTAGTGAGAAGAAGGTAG+AGG | 0.489533 | 6.1:-481263 | MS.gene82797:CDS |
| GGGATGGTTAAGGGTTATAG+TGG | 0.489732 | 6.1:-479605 | MS.gene82797:CDS |
| TCGTCTTTGATGTGCTCCCA+TGG | 0.493556 | 6.1:+478242 | None:intergenic |
| ATCAATAAACCAGTAGCCAT+TGG | 0.493847 | 6.1:+479814 | None:intergenic |
| GAAAAGGAAAAGGGGAAGAG+GGG | 0.496709 | 6.1:-481301 | MS.gene82797:CDS |
| TTGCCAAATCTCCCCACAAA+AGG | 0.497675 | 6.1:+478196 | None:intergenic |
| TGTGGAAAGAGAAAAGGAAA+AGG | 0.500002 | 6.1:-481311 | MS.gene82797:CDS |
| TGGGGTTGGTTCGCGTTTAG+CGG | 0.502102 | 6.1:+482017 | None:intergenic |
| AAAAGTTGTATGAGAAAGCA+AGG | 0.502196 | 6.1:-477850 | MS.gene82797:CDS |
| TAGAGCGTAGCTTGGATGAC+AGG | 0.504180 | 6.1:-477772 | MS.gene82797:intron |
| TATTTACAGGTTGGGCATGC+CGG | 0.506776 | 6.1:-479847 | MS.gene82797:intron |
| CATGTTTGGGATAGTTCGCA+TGG | 0.508231 | 6.1:-481160 | MS.gene82797:CDS |
| GGTCATTCAGCGTGAGCCAT+GGG | 0.508339 | 6.1:-478258 | MS.gene82797:CDS |
| TATCGTTGGCCCAGGATTGG+AGG | 0.513364 | 6.1:+481980 | None:intergenic |
| AATCTCTTCGGAGAGCCGTT+AGG | 0.515298 | 6.1:+476673 | None:intergenic |
| TGCATGGGACTTTCAAGAGC+TGG | 0.515938 | 6.1:-476539 | MS.gene82797:CDS |
| TGTATGAGAAAGCAAGGAGA+GGG | 0.517131 | 6.1:-477844 | MS.gene82797:CDS |
| AGGGGAGGCCACTTCAACAT+GGG | 0.517443 | 6.1:-479570 | MS.gene82797:CDS |
| TGTGGAGAGGAAACGGAGAG+TGG | 0.518712 | 6.1:+482104 | None:intergenic |
| CTCTTCGGAGAGCCGTTAGG+TGG | 0.519359 | 6.1:+476676 | None:intergenic |
| ATTTGACATAGAGCGTAGCT+TGG | 0.526109 | 6.1:-477780 | MS.gene82797:CDS |
| TCGGTTTAATTCCGGTTCAG+TGG | 0.528374 | 6.1:+481951 | None:intergenic |
| TTATAAAATGGTGTATCAGT+TGG | 0.530647 | 6.1:-481692 | MS.gene82797:CDS |
| TAATGCTTATCTTTCTCCCA+AGG | 0.531868 | 6.1:+481712 | None:intergenic |
| TTGTTAGGAAATGGAGATGG+TGG | 0.532437 | 6.1:+482157 | None:intergenic |
| AAACTCCTCCCTCCAATCCT+GGG | 0.533078 | 6.1:-481989 | MS.gene82797:CDS |
| TGGGTTTGGGGAGATTGGGA+CGG | 0.536973 | 6.1:+482046 | None:intergenic |
| TTCGTATTGAAGAGGGTATG+GGG | 0.538366 | 6.1:+482080 | None:intergenic |
| AATATTCAGCAGATGATGCA+TGG | 0.539686 | 6.1:-476555 | MS.gene82797:CDS |
| AGTCAACAAAACTGGTGGAC+AGG | 0.543352 | 6.1:-479777 | MS.gene82797:intron |
| GTTCGTATTGAAGAGGGTAT+GGG | 0.543371 | 6.1:+482079 | None:intergenic |
| TGGGTTGAAGAATCTGGAAG+AGG | 0.545479 | 6.1:+482131 | None:intergenic |
| TAGCGGTTCGAGTGGGTTTG+GGG | 0.545535 | 6.1:+482034 | None:intergenic |
| ATCGTTGGCCCAGGATTGGA+GGG | 0.545981 | 6.1:+481981 | None:intergenic |
| GGTTAATTTATCGTTGGCCC+AGG | 0.546253 | 6.1:+481972 | None:intergenic |
| TGCCGGAACTCTTGATCCAA+TGG | 0.547199 | 6.1:-479830 | MS.gene82797:CDS |
| GGTTTATTGATTGTTTGCGT+TGG | 0.547808 | 6.1:-479802 | MS.gene82797:CDS |
| GGATGGTTAAGGGTTATAGT+GGG | 0.548141 | 6.1:-479604 | MS.gene82797:CDS |
| GCTCTCCGAAGAGATTCAAT+TGG | 0.548644 | 6.1:-476666 | MS.gene82797:intron |
| GAGGGTATGGGGTTGTGGAG+AGG | 0.558727 | 6.1:+482091 | None:intergenic |
| GTTGAGGACTTTGCATAAGA+GGG | 0.560674 | 6.1:-481770 | MS.gene82797:CDS |
| TCGTAACGAGGAACAATTGG+TGG | 0.561729 | 6.1:-481815 | MS.gene82797:CDS |
| TGAGGAGAATGAGAAAGGTG+TGG | 0.562921 | 6.1:-481329 | MS.gene82797:CDS |
| TGATGAGTTCGTATTGAAGA+GGG | 0.563092 | 6.1:+482073 | None:intergenic |
| ATCAGCATCCCATGTTGAAG+TGG | 0.564060 | 6.1:+479562 | None:intergenic |
| GACTTTGCATAAGAGGGAAG+AGG | 0.565594 | 6.1:-481764 | MS.gene82797:CDS |
| TTGTAGTTGCGCCCACCTAA+CGG | 0.568022 | 6.1:-476688 | MS.gene82797:intron |
| ACTTTAATAGCAGAGAACAT+AGG | 0.569137 | 6.1:+478167 | None:intergenic |
| AAGAAAGATGAGGTTGGTGA+TGG | 0.572721 | 6.1:-481373 | MS.gene82797:CDS |
| GGACTTTCAAGAGCTGGAAG+AGG | 0.574710 | 6.1:-476533 | MS.gene82797:CDS |
| TACCGGAAGTTGTGGAGTTG+AGG | 0.577640 | 6.1:-481786 | MS.gene82797:CDS |
| GGGTTTGAATGTGAAGAAGG+AGG | 0.578103 | 6.1:-481230 | MS.gene82797:CDS |
| TGTTAGGAAATGGAGATGGT+GGG | 0.579033 | 6.1:+482158 | None:intergenic |
| AGGTCATTCAGCGTGAGCCA+TGG | 0.580500 | 6.1:-478259 | MS.gene82797:CDS |
| ATGATGAGTTCGTATTGAAG+AGG | 0.580778 | 6.1:+482072 | None:intergenic |
| ACAATTGGTGGAGATGATAC+CGG | 0.583536 | 6.1:-481803 | MS.gene82797:CDS |
| TGGAAAGAGAAAAGGAAAAG+GGG | 0.584024 | 6.1:-481309 | MS.gene82797:CDS |
| AGGGTTAGGAACATGAAAGT+TGG | 0.586439 | 6.1:-481556 | MS.gene82797:CDS |
| TCGCGTTTAGCGGTTCGAGT+GGG | 0.588228 | 6.1:+482027 | None:intergenic |
| GTATGAGAAAGCAAGGAGAG+GGG | 0.588760 | 6.1:-477843 | MS.gene82797:CDS |
| TAGGGGAGGCCACTTCAACA+TGG | 0.592944 | 6.1:-479571 | MS.gene82797:CDS |
| AGGGTTAAGAGCAAGAAAGT+TGG | 0.594240 | 6.1:-481415 | MS.gene82797:CDS |
| GAAAATACTATAACAAGAGG+AGG | 0.597987 | 6.1:-481876 | MS.gene82797:CDS |
| AGAGAAAATACTATAACAAG+AGG | 0.602328 | 6.1:-481879 | MS.gene82797:CDS |
| GGAGATGATACCGGAAGTTG+TGG | 0.602422 | 6.1:-481794 | MS.gene82797:CDS |
| ATATTCAGCAGATGATGCAT+GGG | 0.609401 | 6.1:-476554 | MS.gene82797:CDS |
| ATGCTTCAGATATCAAGGGA+TGG | 0.611716 | 6.1:-479621 | MS.gene82797:intron |
| TCTTCGGAGAGCCGTTAGGT+GGG | 0.612060 | 6.1:+476677 | None:intergenic |
| TATGAACAATTAGATTGACC+AGG | 0.612218 | 6.1:+481622 | None:intergenic |
| GAATGAGAATGCGAATGCTA+GGG | 0.615270 | 6.1:-481434 | MS.gene82797:CDS |
| TTCGCGTTTAGCGGTTCGAG+TGG | 0.615988 | 6.1:+482026 | None:intergenic |
| ATGTTTGGGATAGTTCGCAT+GGG | 0.626322 | 6.1:-481159 | MS.gene82797:CDS |
| GATGGTTAAGGGTTATAGTG+GGG | 0.629063 | 6.1:-479603 | MS.gene82797:CDS |
| TGGCAAGTCAACAAAACTGG+TGG | 0.632066 | 6.1:-479782 | MS.gene82797:CDS |
| TTGTATGAGAAAGCAAGGAG+AGG | 0.634679 | 6.1:-477845 | MS.gene82797:CDS |
| TGATGATCATCGTCGTAACG+AGG | 0.638024 | 6.1:-481827 | MS.gene82797:CDS |
| TAATTCGAATGCGAATACTA+GGG | 0.653259 | 6.1:-481575 | MS.gene82797:CDS |
| AGAGGAGGAAGAGAATGTAT+GGG | 0.662464 | 6.1:-481861 | MS.gene82797:CDS |
| GTTACGACGATGATCATCAT+CGG | 0.663156 | 6.1:+481831 | None:intergenic |
| TTAATAGCAGAGAACATAGG+TGG | 0.666040 | 6.1:+478170 | None:intergenic |
| TTGAAGTGGCCTCCCCTAAG+CGG | 0.669019 | 6.1:+479576 | None:intergenic |
| TTGTTGTTAGGAAATGGAGA+TGG | 0.672758 | 6.1:+482154 | None:intergenic |
| GAACCGGAATTAAACCGACC+CGG | 0.676094 | 6.1:-481946 | MS.gene82797:CDS |
| TGCGAACTATCCCAAACATG+AGG | 0.676995 | 6.1:+481163 | None:intergenic |
| GTTGGCCCAGGATTGGAGGG+AGG | 0.700888 | 6.1:+481984 | None:intergenic |
| AATCTCCCCACAAAAGGACA+AGG | 0.707724 | 6.1:+478202 | None:intergenic |
| ATGGGAGCACATCAAAGACG+AGG | 0.727299 | 6.1:-478240 | MS.gene82797:CDS |
| ATATATTCGATCACTCTGTG+CGG | 0.736006 | 6.1:-476835 | MS.gene82797:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr6.1:479367-479348 | None:intergenic | 0.0% |
| !! | ATAATTTATTAATCCATTAA+AGG | - | chr6.1:479556-479575 | MS.gene82797:CDS | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr6.1:478198-478217 | MS.gene82797:CDS | 10.0% |
| !!! | GAATTTTTACAAAAAAATAT+TGG | - | chr6.1:479888-479907 | MS.gene82797:intron | 10.0% |
| !!! | TATTTAATATATGCAAATTT+TGG | - | chr6.1:478372-478391 | MS.gene82797:intron | 10.0% |
| !!! | TTAAAGTATTAATTATTTAC+AGG | - | chr6.1:478836-478855 | MS.gene82797:intron | 10.0% |
| !!! | TTTAATTAAAATTTTTGATC+TGG | - | chr6.1:479020-479039 | MS.gene82797:intron | 10.0% |
| !!! | TTTCAAACATAATTTTTATA+AGG | + | chr6.1:481733-481752 | None:intergenic | 10.0% |
| !! | AAAGTATAACAAATAAATCA+GGG | + | chr6.1:481796-481815 | None:intergenic | 15.0% |
| !! | ATAAATTATCTTTGACAAAA+TGG | + | chr6.1:479545-479564 | None:intergenic | 15.0% |
| !! | ATATAAAATAATAATGATGG+TGG | - | chr6.1:481051-481070 | MS.gene82797:intron | 15.0% |
| !! | TATAAAATAATAATGATGGT+GGG | - | chr6.1:481052-481071 | MS.gene82797:intron | 15.0% |
| !! | TATCATATTAATAAACACAT+AGG | + | chr6.1:480143-480162 | None:intergenic | 15.0% |
| !! | TATTAATATGATTTGATGTT+TGG | - | chr6.1:480177-480196 | MS.gene82797:intron | 15.0% |
| !! | TTTCTACCATTTAATTATTT+AGG | + | chr6.1:481231-481250 | None:intergenic | 15.0% |
| !!! | AAAAGTATAACAAATAAATC+AGG | + | chr6.1:481797-481816 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr6.1:478302-478321 | MS.gene82797:intron | 15.0% |
| !!! | TATATATTTTTTCAAACTAG+TGG | + | chr6.1:481036-481055 | None:intergenic | 15.0% |
| !!! | TTGATTTTAACTTCTATTAA+TGG | + | chr6.1:481011-481030 | None:intergenic | 15.0% |
| !! | AAAAATTAAGTGTGAATTTG+TGG | - | chr6.1:478704-478723 | MS.gene82797:intron | 20.0% |
| !! | AAAATTAAATGGTTCAAGAA+TGG | + | chr6.1:480566-480585 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr6.1:478164-478183 | MS.gene82797:intron | 20.0% |
| !! | AAGTTTATGTAATAAAGATG+GGG | - | chr6.1:481409-481428 | MS.gene82797:CDS | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr6.1:478165-478184 | None:intergenic | 20.0% |
| !! | ACAAGTTTATGTAATAAAGA+TGG | - | chr6.1:481407-481426 | MS.gene82797:CDS | 20.0% |
| !! | ACGAAACTATGAAAATTAAA+TGG | + | chr6.1:480577-480596 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr6.1:478262-478281 | MS.gene82797:intron | 20.0% |
| !! | AGTATTAATTATTTACAGGT+TGG | - | chr6.1:478840-478859 | MS.gene82797:intron | 20.0% |
| !! | CAACATTATGTTCTTAAATA+TGG | - | chr6.1:478630-478649 | MS.gene82797:intron | 20.0% |
| !! | CAAGTTTATGTAATAAAGAT+GGG | - | chr6.1:481408-481427 | MS.gene82797:CDS | 20.0% |
| !! | CACATTATATAATTAGCTAT+TGG | - | chr6.1:479200-479219 | MS.gene82797:intron | 20.0% |
| !! | CATACACAAGTATTATTTAT+TGG | - | chr6.1:480254-480273 | MS.gene82797:intron | 20.0% |
| !! | GAAAGATAAGCATTATAAAA+TGG | - | chr6.1:476992-477011 | MS.gene82797:intron | 20.0% |
| !! | GTATTAATTATTTACAGGTT+GGG | - | chr6.1:478841-478860 | MS.gene82797:intron | 20.0% |
| !! | TCATGTCCTAAATAATTAAA+TGG | - | chr6.1:481222-481241 | MS.gene82797:CDS | 20.0% |
| !! | TTATATAATTAGCTATTGGT+TGG | - | chr6.1:479204-479223 | MS.gene82797:intron | 20.0% |
| !!! | AAATCTTTGTTTTTTTTGTG+TGG | - | chr6.1:478570-478589 | MS.gene82797:intron | 20.0% |
| !!! | AAGAAAAATGTTGATTACAT+AGG | + | chr6.1:480701-480720 | None:intergenic | 20.0% |
| !!! | ACACTTAATTTTTACTTTCA+TGG | + | chr6.1:478697-478716 | None:intergenic | 20.0% |
| !!! | ATACTTAATAGTGTTTCTTT+TGG | - | chr6.1:478662-478681 | MS.gene82797:intron | 20.0% |
| !!! | TAAATATGTCATTTCAGAAA+TGG | - | chr6.1:480646-480665 | MS.gene82797:intron | 20.0% |
| !!! | TACTTAATAGTGTTTCTTTT+GGG | - | chr6.1:478663-478682 | MS.gene82797:intron | 20.0% |
| !!! | TCTAAAAATCAAATTTTGTC+TGG | + | chr6.1:481821-481840 | None:intergenic | 20.0% |
| ! | AAACAAAAACTGTACTATAG+TGG | + | chr6.1:479002-479021 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr6.1:478174-478193 | None:intergenic | 25.0% |
| ! | AGAGAAAATACTATAACAAG+AGG | - | chr6.1:476817-476836 | MS.gene82797:CDS | 25.0% |
| ! | ATATATATATATATGGCGCT+AGG | + | chr6.1:479341-479360 | None:intergenic | 25.0% |
| ! | CAACTTAAATCATGATTCAA+AGG | + | chr6.1:480987-481006 | None:intergenic | 25.0% |
| ! | CATACAATAAACACAAGATT+AGG | - | chr6.1:481336-481355 | MS.gene82797:CDS | 25.0% |
| ! | CATTTCTCAAAATAAATGGA+GGG | + | chr6.1:481079-481098 | None:intergenic | 25.0% |
| ! | CGGTTTCAATATATTGAAAT+TGG | - | chr6.1:480208-480227 | MS.gene82797:intron | 25.0% |
| ! | GCTATTTACATTTCTTATTG+TGG | - | chr6.1:477599-477618 | MS.gene82797:intron | 25.0% |
| ! | TCTCCATTTCTCAAAATAAA+TGG | + | chr6.1:481083-481102 | None:intergenic | 25.0% |
| ! | TCTTGTGTTTATTGTATGTT+TGG | + | chr6.1:481334-481353 | None:intergenic | 25.0% |
| ! | TGAAATATATATGTGTACTG+TGG | + | chr6.1:478797-478816 | None:intergenic | 25.0% |
| ! | TGATCAATGAAAATGAAATC+AGG | + | chr6.1:478529-478548 | None:intergenic | 25.0% |
| ! | TGGTTTATTCTTCATTGAAA+CGG | + | chr6.1:481608-481627 | None:intergenic | 25.0% |
| ! | TTATAAAATGGTGTATCAGT+TGG | - | chr6.1:477004-477023 | MS.gene82797:intron | 25.0% |
| ! | TTGAAATTTGAATTGGGTTT+GGG | - | chr6.1:479980-479999 | MS.gene82797:intron | 25.0% |
| ! | TTGATTCATTCATCAACAAT+TGG | - | chr6.1:481130-481149 | MS.gene82797:intron | 25.0% |
| ! | TTTCATTGATCACATAATGT+AGG | - | chr6.1:478537-478556 | MS.gene82797:intron | 25.0% |
| ! | TTTCGTTAAAGTTATGAAGT+TGG | - | chr6.1:480591-480610 | MS.gene82797:intron | 25.0% |
| !! | AATTATTTAGGACATGAGAA+GGG | + | chr6.1:481219-481238 | None:intergenic | 25.0% |
| !! | GTAACAGAGTATTAATTGAA+GGG | - | chr6.1:478228-478247 | MS.gene82797:CDS | 25.0% |
| !! | GTTTGTCATTTATAAAGACT+TGG | - | chr6.1:480767-480786 | MS.gene82797:intron | 25.0% |
| !! | TAATTATTTAGGACATGAGA+AGG | + | chr6.1:481220-481239 | None:intergenic | 25.0% |
| !! | TATAAAGACTTGGTTTCTTA+TGG | - | chr6.1:480777-480796 | MS.gene82797:intron | 25.0% |
| !! | TGTAACAGAGTATTAATTGA+AGG | - | chr6.1:478227-478246 | MS.gene82797:CDS | 25.0% |
| !! | TTTGAAATTTGAATTGGGTT+TGG | - | chr6.1:479979-479998 | MS.gene82797:intron | 25.0% |
| !! | TTTTATGCTTCAGATATCAA+GGG | - | chr6.1:479071-479090 | MS.gene82797:intron | 25.0% |
| !! | TTTTTATGCTTCAGATATCA+AGG | - | chr6.1:479070-479089 | MS.gene82797:intron | 25.0% |
| !!! | AATCATCACTGCTTTTTTAT+AGG | - | chr6.1:480814-480833 | MS.gene82797:intron | 25.0% |
| !!! | ATCATGACTTTAAAATAGAG+AGG | - | chr6.1:479455-479474 | MS.gene82797:intron | 25.0% |
| !!! | CTCTATTTTAAAGTCATGAT+AGG | + | chr6.1:479455-479474 | None:intergenic | 25.0% |
| !!! | CTTGTTATAGTATTTTCTCT+TGG | + | chr6.1:476817-476836 | None:intergenic | 25.0% |
| !!! | CTTTTGATTAACAAACCTAA+AGG | - | chr6.1:477566-477585 | MS.gene82797:intron | 25.0% |
| !!! | TGATAAGTTGATGTTTTTTG+AGG | - | chr6.1:477349-477368 | MS.gene82797:intron | 25.0% |
| !!! | TGTAGTTGATTTGTTCATTT+TGG | - | chr6.1:481770-481789 | MS.gene82797:CDS | 25.0% |
| !!! | TTGCATGTTGATTTACTTTT+GGG | - | chr6.1:478035-478054 | MS.gene82797:intron | 25.0% |
| AAAAGTTGTATGAGAAAGCA+AGG | - | chr6.1:480846-480865 | MS.gene82797:intron | 30.0% | |
| AAGAAATGTAAATAGCGAAG+TGG | + | chr6.1:477595-477614 | None:intergenic | 30.0% | |
| ACTTACCAATTGAATCTCTT+CGG | + | chr6.1:482038-482057 | None:intergenic | 30.0% | |
| ACTTTAATAGCAGAGAACAT+AGG | + | chr6.1:480532-480551 | None:intergenic | 30.0% | |
| AGAAAAACAGATTAACTCAC+TGG | + | chr6.1:479163-479182 | None:intergenic | 30.0% | |
| AGCTAATTGCACACATATTA+AGG | - | chr6.1:478103-478122 | MS.gene82797:intron | 30.0% | |
| ATAAACACAAGATTAGGAGA+TGG | - | chr6.1:481342-481361 | MS.gene82797:CDS | 30.0% | |
| ATCATGATTCAAAGGCAAAA+AGG | + | chr6.1:480979-480998 | None:intergenic | 30.0% | |
| CAAGTTTACAAACTAATGGT+TGG | + | chr6.1:481472-481491 | None:intergenic | 30.0% | |
| CAGTTTATGTTTCATGAGTA+CGG | + | chr6.1:481110-481129 | None:intergenic | 30.0% | |
| CCATTTCTCAAAATAAATGG+AGG | + | chr6.1:481080-481099 | None:intergenic | 30.0% | |
| CTAAGTTAGTTATTGTCTGT+AGG | - | chr6.1:481501-481520 | MS.gene82797:CDS | 30.0% | |
| CTCACAAGTTTACAAACTAA+TGG | + | chr6.1:481476-481495 | None:intergenic | 30.0% | |
| GAAAATACTATAACAAGAGG+AGG | - | chr6.1:476820-476839 | MS.gene82797:CDS | 30.0% | |
| GAATTGAATTGAAGGTCAAT+GGG | + | chr6.1:482068-482087 | None:intergenic | 30.0% | |
| GATCTGTTGAATTTGTAAGA+TGG | - | chr6.1:480064-480083 | MS.gene82797:intron | 30.0% | |
| GTCTAACTATGATCTATCTA+CGG | + | chr6.1:479523-479542 | None:intergenic | 30.0% | |
| TAAAGATGTTAGTGAGAAGA+AGG | - | chr6.1:477427-477446 | MS.gene82797:intron | 30.0% | |
| TAATTCGAATGCGAATACTA+GGG | - | chr6.1:477121-477140 | MS.gene82797:intron | 30.0% | |
| TATCTCAGAGAAATTAAACG+TGG | + | chr6.1:481628-481647 | None:intergenic | 30.0% | |
| TATGAACAATTAGATTGACC+AGG | + | chr6.1:477077-477096 | None:intergenic | 30.0% | |
| TCACTCTTGAATTGAATTGA+AGG | + | chr6.1:482076-482095 | None:intergenic | 30.0% | |
| TCATGATTCAAAGGCAAAAA+GGG | + | chr6.1:480978-480997 | None:intergenic | 30.0% | |
| TGAATTGAATTGAAGGTCAA+TGG | + | chr6.1:482069-482088 | None:intergenic | 30.0% | |
| TGAGTCACATTACAATGATT+TGG | + | chr6.1:480317-480336 | None:intergenic | 30.0% | |
| TTCAGTGGTTAATTTATCGT+TGG | + | chr6.1:476733-476752 | None:intergenic | 30.0% | |
| TTGCATTGCTTCAAATGTAA+AGG | - | chr6.1:479235-479254 | MS.gene82797:intron | 30.0% | |
| ! | AAACCTATTTTGCATTGTAG+CGG | - | chr6.1:477806-477825 | MS.gene82797:CDS | 30.0% |
| ! | ATTATTTAGGACATGAGAAG+GGG | + | chr6.1:481218-481237 | None:intergenic | 30.0% |
| ! | ATTTGATTTCTCACTGATTG+CGG | - | chr6.1:479484-479503 | MS.gene82797:intron | 30.0% |
| ! | GGGTGTTTGAAATTTGAATT+GGG | - | chr6.1:479974-479993 | MS.gene82797:intron | 30.0% |
| ! | GTATTTTCCTAATCAGTGTT+TGG | - | chr6.1:477034-477053 | MS.gene82797:intron | 30.0% |
| ! | TACATTTGAAGCAATGCAAT+AGG | + | chr6.1:479234-479253 | None:intergenic | 30.0% |
| ! | TAGAACTATTCTGAGAACTA+TGG | + | chr6.1:479382-479401 | None:intergenic | 30.0% |
| ! | TCTTGCAGATTTCTTTTGTT+TGG | - | chr6.1:479953-479972 | MS.gene82797:CDS | 30.0% |
| ! | TGGGTGTTTGAAATTTGAAT+TGG | - | chr6.1:479973-479992 | MS.gene82797:intron | 30.0% |
| ! | TTTTTATGCGGGTTTTTGAT+AGG | - | chr6.1:481367-481386 | MS.gene82797:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr6.1:478328-478347 | MS.gene82797:intron | 30.0% |
| !! | AAGTTCAAATTTTGACGAAC+CGG | + | chr6.1:476772-476791 | None:intergenic | 30.0% |
| !! | ATAGGAGAAAGTGTTATTTC+AGG | + | chr6.1:479437-479456 | None:intergenic | 30.0% |
| !! | ATGATGCTTTTTGTTATCCT+TGG | - | chr6.1:476967-476986 | MS.gene82797:intron | 30.0% |
| !! | CTTGCAGATTTCTTTTGTTT+GGG | - | chr6.1:479954-479973 | MS.gene82797:CDS | 30.0% |
| !! | GGTTTTGTAATATCTGCTAA+TGG | - | chr6.1:481286-481305 | MS.gene82797:CDS | 30.0% |
| !! | GTTTAATTTCTCTGAGATAC+TGG | - | chr6.1:481629-481648 | MS.gene82797:CDS | 30.0% |
| !! | TAACCTTTTTCACTTTGACA+AGG | + | chr6.1:478770-478789 | None:intergenic | 30.0% |
| !! | TGATGCTTTTTGTTATCCTT+GGG | - | chr6.1:476968-476987 | MS.gene82797:intron | 30.0% |
| !! | TTAGAGTGACTTGTTCTAAA+GGG | - | chr6.1:481836-481855 | MS.gene82797:CDS | 30.0% |
| !! | TTGTCTTATTTGTTCGTACT+TGG | - | chr6.1:479845-479864 | MS.gene82797:intron | 30.0% |
| !! | TTTAGAGTGACTTGTTCTAA+AGG | - | chr6.1:481835-481854 | MS.gene82797:CDS | 30.0% |
| !!! | AAGGTAGAGGAGTTTTTTAA+GGG | - | chr6.1:477446-477465 | MS.gene82797:intron | 30.0% |
| !!! | AAGTTGGGATTTTTTGTTGT+TGG | - | chr6.1:481265-481284 | MS.gene82797:CDS | 30.0% |
| !!! | ACATGAAAGTTGGTGTTTTT+AGG | - | chr6.1:477150-477169 | MS.gene82797:intron | 30.0% |
| !!! | ATCACTGCTTTTTTATAGGT+TGG | - | chr6.1:480818-480837 | MS.gene82797:intron | 30.0% |
| !!! | CATGAAAGTTGGTGTTTTTA+GGG | - | chr6.1:477151-477170 | MS.gene82797:intron | 30.0% |
| !!! | CATGCAATTTTTTCACTCAT+AGG | - | chr6.1:480400-480419 | MS.gene82797:intron | 30.0% |
| !!! | CCTCCATTTATTTTGAGAAA+TGG | - | chr6.1:481077-481096 | MS.gene82797:intron | 30.0% |
| !!! | CTTGCATGTTGATTTACTTT+TGG | - | chr6.1:478034-478053 | MS.gene82797:intron | 30.0% |
| !!! | TAGGAGATGGATTTTTTATG+CGG | - | chr6.1:481355-481374 | MS.gene82797:CDS | 30.0% |
| !!! | TGGTGTTTTTTGATGAGAAT+GGG | - | chr6.1:477204-477223 | MS.gene82797:intron | 30.0% |
| !!! | TTGGTGTTTTTTGATGAGAA+TGG | - | chr6.1:477203-477222 | MS.gene82797:intron | 30.0% |
| !!! | TTTTTTGAGGAGAATGAGAA+AGG | - | chr6.1:477362-477381 | MS.gene82797:intron | 30.0% |
| AACTCCTCAATGTAGAAAGT+TGG | - | chr6.1:481249-481268 | MS.gene82797:CDS | 35.0% | |
| AATATTCAGCAGATGATGCA+TGG | - | chr6.1:482141-482160 | MS.gene82797:CDS | 35.0% | |
| AATCCCAACTTTCTACATTG+AGG | + | chr6.1:481256-481275 | None:intergenic | 35.0% | |
| ACTCCTCAATGTAGAAAGTT+GGG | - | chr6.1:481250-481269 | MS.gene82797:CDS | 35.0% | |
| AGATATCAAGGGATGGTTAA+GGG | - | chr6.1:479082-479101 | MS.gene82797:intron | 35.0% | |
| AGTTAGTTATTGTCTGTAGG+AGG | - | chr6.1:481504-481523 | MS.gene82797:CDS | 35.0% | |
| ATATATTCGATCACTCTGTG+CGG | - | chr6.1:481861-481880 | MS.gene82797:CDS | 35.0% | |
| ATATTCAGCAGATGATGCAT+GGG | - | chr6.1:482142-482161 | MS.gene82797:CDS | 35.0% | |
| ATCAATAAACCAGTAGCCAT+TGG | + | chr6.1:478885-478904 | None:intergenic | 35.0% | |
| ATGATGAGTTCGTATTGAAG+AGG | + | chr6.1:476627-476646 | None:intergenic | 35.0% | |
| ATGATTTGATGTTTGGACCT+TGG | - | chr6.1:480184-480203 | MS.gene82797:intron | 35.0% | |
| ATTAAGTGTGAATTTGTGGC+AGG | - | chr6.1:478708-478727 | MS.gene82797:intron | 35.0% | |
| ATTCCGCTACAATGCAAAAT+AGG | + | chr6.1:477812-477831 | None:intergenic | 35.0% | |
| ATTTGTTCGTACTTGGCTAT+TGG | - | chr6.1:479852-479871 | MS.gene82797:intron | 35.0% | |
| CATGATTCAAAGGCAAAAAG+GGG | + | chr6.1:480977-480996 | None:intergenic | 35.0% | |
| CCAGTACTTAGTACTCAAAT+GGG | + | chr6.1:478971-478990 | None:intergenic | 35.0% | |
| CGATAAATTAACCACTGAAC+CGG | - | chr6.1:476734-476753 | MS.gene82797:intron | 35.0% | |
| CTAATTCGAATGCGAATACT+AGG | - | chr6.1:477120-477139 | MS.gene82797:intron | 35.0% | |
| CTGTAATGAAATTCTTCTCC+AGG | - | chr6.1:482116-482135 | MS.gene82797:CDS | 35.0% | |
| GAATGACCTACATATTAAGC+TGG | + | chr6.1:480426-480445 | None:intergenic | 35.0% | |
| GATGTCATTCTCATTGAAAG+TGG | + | chr6.1:478443-478462 | None:intergenic | 35.0% | |
| GTGCTATAGTTATTGTGACA+GGG | - | chr6.1:481435-481454 | MS.gene82797:CDS | 35.0% | |
| GTGGAAAGAGAAAAGGAAAA+GGG | - | chr6.1:477386-477405 | MS.gene82797:intron | 35.0% | |
| GTTGAATTTGTAAGATGGTG+AGG | - | chr6.1:480069-480088 | MS.gene82797:intron | 35.0% | |
| TAACAGCTTTGCGCTTATAA+TGG | - | chr6.1:481654-481673 | MS.gene82797:CDS | 35.0% | |
| TAAGGGTTTGAATGTGAAGA+AGG | - | chr6.1:477463-477482 | MS.gene82797:intron | 35.0% | |
| TAATGCTTATCTTTCTCCCA+AGG | + | chr6.1:476987-477006 | None:intergenic | 35.0% | |
| TAGCTACTATTTGACAACAC+TGG | + | chr6.1:477649-477668 | None:intergenic | 35.0% | |
| TCCAGTACTTAGTACTCAAA+TGG | + | chr6.1:478972-478991 | None:intergenic | 35.0% | |
| TGATGAGTTCGTATTGAAGA+GGG | + | chr6.1:476626-476645 | None:intergenic | 35.0% | |
| TGATTTGATGTTTGGACCTT+GGG | - | chr6.1:480185-480204 | MS.gene82797:intron | 35.0% | |
| TGGAAAGAGAAAAGGAAAAG+GGG | - | chr6.1:477387-477406 | MS.gene82797:intron | 35.0% | |
| TGGAAGATTGAAATTCGTCT+TGG | + | chr6.1:480896-480915 | None:intergenic | 35.0% | |
| TGTGACTCATAAGCAGAATT+AGG | - | chr6.1:480328-480347 | MS.gene82797:intron | 35.0% | |
| TGTGCTATAGTTATTGTGAC+AGG | - | chr6.1:481434-481453 | MS.gene82797:CDS | 35.0% | |
| TGTGGAAAGAGAAAAGGAAA+AGG | - | chr6.1:477385-477404 | MS.gene82797:intron | 35.0% | |
| TTAATAGCAGAGAACATAGG+TGG | + | chr6.1:480529-480548 | None:intergenic | 35.0% | |
| TTCAACAGATCAAATTCAGC+CGG | + | chr6.1:480055-480074 | None:intergenic | 35.0% | |
| TTGTTTAATAGCTGCTATCG+TGG | - | chr6.1:477748-477767 | MS.gene82797:intron | 35.0% | |
| TTTCCTGCTTCATTAGTTGT+GGG | - | chr6.1:480015-480034 | MS.gene82797:intron | 35.0% | |
| TTTGCACTCATTTGCAAAGT+TGG | - | chr6.1:477931-477950 | MS.gene82797:intron | 35.0% | |
| ! | AAACTGTACTATAGTGGAAC+AGG | + | chr6.1:478996-479015 | None:intergenic | 35.0% |
| ! | AAGAGGTTGTTGTTAGGAAA+TGG | + | chr6.1:476551-476570 | None:intergenic | 35.0% |
| ! | GGTTTATTGATTGTTTGCGT+TGG | - | chr6.1:478894-478913 | MS.gene82797:intron | 35.0% |
| ! | TGATTTGGATGCATTTATCC+AGG | + | chr6.1:480302-480321 | None:intergenic | 35.0% |
| ! | TGGGTTAGAGATACAGATAT+TGG | + | chr6.1:476522-476541 | None:intergenic | 35.0% |
| ! | TTGTTGTTAGGAAATGGAGA+TGG | + | chr6.1:476545-476564 | None:intergenic | 35.0% |
| ! | TTTGATTTCTCACTGATTGC+GGG | - | chr6.1:479485-479504 | MS.gene82797:intron | 35.0% |
| ! | TTTTCCTGCTTCATTAGTTG+TGG | - | chr6.1:480014-480033 | MS.gene82797:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr6.1:478082-478101 | None:intergenic | 35.0% |
| !! | AGTTCAAATTTTGACGAACC+GGG | + | chr6.1:476771-476790 | None:intergenic | 35.0% |
| !! | ATGGAATGATTGTTAGCCTT+TGG | - | chr6.1:481305-481324 | MS.gene82797:CDS | 35.0% |
| !! | GAAAAGTATCAATTCAAGCC+TGG | - | chr6.1:480281-480300 | MS.gene82797:intron | 35.0% |
| !! | GGTTGTTGATGATGATAAGT+TGG | - | chr6.1:477184-477203 | MS.gene82797:intron | 35.0% |
| !! | TGGAATGATTGTTAGCCTTT+GGG | - | chr6.1:481306-481325 | MS.gene82797:CDS | 35.0% |
| !!! | AAAGTTGGTGTTTTTGGTGT+TGG | - | chr6.1:477296-477315 | MS.gene82797:intron | 35.0% |
| !!! | AAGTTGGTGTTTTTGGTGTT+GGG | - | chr6.1:477297-477316 | MS.gene82797:intron | 35.0% |
| !!! | ACTGCTTTTTTATAGGTTGG+AGG | - | chr6.1:480821-480840 | MS.gene82797:intron | 35.0% |
| !!! | AGCAAGAAAGTTGGTGTTTT+TGG | - | chr6.1:477290-477309 | MS.gene82797:intron | 35.0% |
| !!! | AGGAGATGGATTTTTTATGC+GGG | - | chr6.1:481356-481375 | MS.gene82797:CDS | 35.0% |
| !!! | ATTCAGCCGGTTTTAGTTAT+TGG | + | chr6.1:480042-480061 | None:intergenic | 35.0% |
| !!! | GAAGGTAGAGGAGTTTTTTA+AGG | - | chr6.1:477445-477464 | MS.gene82797:intron | 35.0% |
| !!! | TGGTGTTTTTAGGGAGAATA+AGG | - | chr6.1:477160-477179 | MS.gene82797:intron | 35.0% |
| !!! | TGTTTTTAGGGAGAATAAGG+AGG | - | chr6.1:477163-477182 | MS.gene82797:intron | 35.0% |
| AACACATAGGCCTCATCAAA+TGG | + | chr6.1:480130-480149 | None:intergenic | 40.0% | |
| AAGAGGAGGAAGAGAATGTA+TGG | - | chr6.1:476834-476853 | MS.gene82797:CDS | 40.0% | |
| AAGCAAAACGAAGCAAAGCA+AGG | + | chr6.1:478017-478036 | None:intergenic | 40.0% | |
| ACAATTGGTGGAGATGATAC+CGG | - | chr6.1:476893-476912 | MS.gene82797:intron | 40.0% | |
| ACACATAGGCCTCATCAAAT+GGG | + | chr6.1:480129-480148 | None:intergenic | 40.0% | |
| ACACGAACAAAATTGGAGCA+TGG | + | chr6.1:479657-479676 | None:intergenic | 40.0% | |
| AGAAAAGGAAAAGGGGAAGA+GGG | - | chr6.1:477394-477413 | MS.gene82797:intron | 40.0% | |
| AGACAAATGAGCTCACACTA+TGG | - | chr6.1:479314-479333 | MS.gene82797:intron | 40.0% | |
| AGAGGAGGAAGAGAATGTAT+GGG | - | chr6.1:476835-476854 | MS.gene82797:CDS | 40.0% | |
| AGCTACGCTCTATGTCAAAT+TGG | + | chr6.1:480916-480935 | None:intergenic | 40.0% | |
| AGGGTTAAGAGCAAGAAAGT+TGG | - | chr6.1:477281-477300 | MS.gene82797:intron | 40.0% | |
| AGGGTTAGGAACATGAAAGT+TGG | - | chr6.1:477140-477159 | MS.gene82797:intron | 40.0% | |
| AGTTCGTATTGAAGAGGGTA+TGG | + | chr6.1:476621-476640 | None:intergenic | 40.0% | |
| AGTTGAGGACTTTGCATAAG+AGG | - | chr6.1:476925-476944 | MS.gene82797:intron | 40.0% | |
| ATCTGCAAGAACCAGTGTTT+CGG | + | chr6.1:479943-479962 | None:intergenic | 40.0% | |
| ATGAGTGCAAAACACGAAGT+TGG | + | chr6.1:477922-477941 | None:intergenic | 40.0% | |
| ATGCTTCAGATATCAAGGGA+TGG | - | chr6.1:479075-479094 | MS.gene82797:intron | 40.0% | |
| ATTGAAACGGTGATATCACC+AGG | + | chr6.1:481595-481614 | None:intergenic | 40.0% | |
| ATTTGACATAGAGCGTAGCT+TGG | - | chr6.1:480916-480935 | MS.gene82797:intron | 40.0% | |
| CAATATATTGAAACCGCCCA+AGG | + | chr6.1:480204-480223 | None:intergenic | 40.0% | |
| CAGATATCAAGGGATGGTTA+AGG | - | chr6.1:479081-479100 | MS.gene82797:intron | 40.0% | |
| CATAGGCCAGCTTAATATGT+AGG | - | chr6.1:480417-480436 | MS.gene82797:intron | 40.0% | |
| CCCATTTGAGTACTAAGTAC+TGG | - | chr6.1:478968-478987 | MS.gene82797:intron | 40.0% | |
| CGAAAATTGCCCATTTGATG+AGG | - | chr6.1:480117-480136 | MS.gene82797:intron | 40.0% | |
| CTGCCAAACACGAACAAAAT+TGG | + | chr6.1:479664-479683 | None:intergenic | 40.0% | |
| GAATGAGAATGCGAATGCTA+GGG | - | chr6.1:477262-477281 | MS.gene82797:intron | 40.0% | |
| GATGGTTAAGGGTTATAGTG+GGG | - | chr6.1:479093-479112 | MS.gene82797:intron | 40.0% | |
| GGATGGTTAAGGGTTATAGT+GGG | - | chr6.1:479092-479111 | MS.gene82797:intron | 40.0% | |
| GGGGAAAAGGGTTAAAGATT+AGG | + | chr6.1:481199-481218 | None:intergenic | 40.0% | |
| GTCCTCCTCGAACTAAAAAA+CGG | + | chr6.1:477506-477525 | None:intergenic | 40.0% | |
| GTGGGTCCAATAACTAAAAC+CGG | - | chr6.1:480033-480052 | MS.gene82797:intron | 40.0% | |
| GTTACGACGATGATCATCAT+CGG | + | chr6.1:476868-476887 | None:intergenic | 40.0% | |
| GTTGAGGACTTTGCATAAGA+GGG | - | chr6.1:476926-476945 | MS.gene82797:intron | 40.0% | |
| TATTGTCTGTAGGAGGAACT+TGG | - | chr6.1:481511-481530 | MS.gene82797:CDS | 40.0% | |
| TCATCTGCTGAATATTGTCC+TGG | + | chr6.1:482137-482156 | None:intergenic | 40.0% | |
| TCCTAATCAGTGTTTGGATC+AGG | - | chr6.1:477040-477059 | MS.gene82797:intron | 40.0% | |
| TCGCCTTGTCAAAGTGAAAA+AGG | - | chr6.1:478764-478783 | MS.gene82797:intron | 40.0% | |
| TGGACTTCATTCACAGTTTG+TGG | - | chr6.1:478732-478751 | MS.gene82797:intron | 40.0% | |
| TGGATGACAGGTAACTTTCT+GGG | - | chr6.1:480936-480955 | MS.gene82797:intron | 40.0% | |
| TGTATGAGAAAGCAAGGAGA+GGG | - | chr6.1:480852-480871 | MS.gene82797:intron | 40.0% | |
| TGTTAGGAAATGGAGATGGT+GGG | + | chr6.1:476541-476560 | None:intergenic | 40.0% | |
| TGTTAGTGAGAAGAAGGTAG+AGG | - | chr6.1:477433-477452 | MS.gene82797:intron | 40.0% | |
| TTACTGAGTGGTTAACCTGA+TGG | - | chr6.1:477984-478003 | MS.gene82797:intron | 40.0% | |
| TTGAAACGGTGATATCACCA+GGG | + | chr6.1:481594-481613 | None:intergenic | 40.0% | |
| TTGGATGACAGGTAACTTTC+TGG | - | chr6.1:480935-480954 | MS.gene82797:intron | 40.0% | |
| TTGTATGAGAAAGCAAGGAG+AGG | - | chr6.1:480851-480870 | MS.gene82797:intron | 40.0% | |
| TTGTTAGGAAATGGAGATGG+TGG | + | chr6.1:476542-476561 | None:intergenic | 40.0% | |
| TTTACTGCAGCACTAAGTGA+CGG | - | chr6.1:478476-478495 | MS.gene82797:intron | 40.0% | |
| ! | AACTAATGGTTGGTTCAGCT+TGG | + | chr6.1:481462-481481 | None:intergenic | 40.0% |
| ! | ACTAATGGTTGGTTCAGCTT+GGG | + | chr6.1:481461-481480 | None:intergenic | 40.0% |
| ! | AGTGCTGCAGTAAAAGCATA+TGG | + | chr6.1:478470-478489 | None:intergenic | 40.0% |
| ! | ATCTGGAAGAGGTTGTTGTT+AGG | + | chr6.1:476557-476576 | None:intergenic | 40.0% |
| ! | ATGCGGGTTTTTGATAGGAA+GGG | - | chr6.1:481372-481391 | MS.gene82797:CDS | 40.0% |
| ! | ATGTTTGGGATAGTTCGCAT+GGG | - | chr6.1:477537-477556 | MS.gene82797:intron | 40.0% |
| ! | ATTGTATGTTTGGAGCCCAA+AGG | + | chr6.1:481324-481343 | None:intergenic | 40.0% |
| ! | GAAAGGTGTGGAAAGAGAAA+AGG | - | chr6.1:477379-477398 | MS.gene82797:intron | 40.0% |
| ! | GCTCCAATTTTGTTCGTGTT+TGG | - | chr6.1:479658-479677 | MS.gene82797:intron | 40.0% |
| ! | GTTCGTATTGAAGAGGGTAT+GGG | + | chr6.1:476620-476639 | None:intergenic | 40.0% |
| ! | TATGCGGGTTTTTGATAGGA+AGG | - | chr6.1:481371-481390 | MS.gene82797:CDS | 40.0% |
| ! | TCAAATGGGCAATTTTCGCA+TGG | + | chr6.1:480115-480134 | None:intergenic | 40.0% |
| ! | TTCGTATTGAAGAGGGTATG+GGG | + | chr6.1:476619-476638 | None:intergenic | 40.0% |
| !! | AAAGTGCCTTGTCCTTTTGT+GGG | - | chr6.1:480488-480507 | MS.gene82797:intron | 40.0% |
| !! | AAGAAAGATGAGGTTGGTGA+TGG | - | chr6.1:477323-477342 | MS.gene82797:intron | 40.0% |
| !! | AGTGACGGTTTAGGTTGTAT+TGG | - | chr6.1:478491-478510 | MS.gene82797:intron | 40.0% |
| !! | ATCACGCATCGCTTGTTATT+GGG | - | chr6.1:481698-481717 | MS.gene82797:CDS | 40.0% |
| !! | TATCACGCATCGCTTGTTAT+TGG | - | chr6.1:481697-481716 | MS.gene82797:CDS | 40.0% |
| !!! | AAAAGTGCCTTGTCCTTTTG+TGG | - | chr6.1:480487-480506 | MS.gene82797:intron | 40.0% |
| !!! | AGTTGGTGTTTTTGGTGTTG+GGG | - | chr6.1:477298-477317 | MS.gene82797:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr6.1:478332-478351 | MS.gene82797:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr6.1:478351-478332 | None:intergenic | 40.0% |
| !!! | GATCAGGCTTTTTTGAAACC+TGG | - | chr6.1:477056-477075 | MS.gene82797:intron | 40.0% |
| !!! | GTTTTTTAGTTCGAGGAGGA+CGG | - | chr6.1:477505-477524 | MS.gene82797:intron | 40.0% |
| !!! | TTGAGCCGTTTTTTAGTTCG+AGG | - | chr6.1:477498-477517 | MS.gene82797:intron | 40.0% |
| !!! | TTTTTTAGTTCGAGGAGGAC+GGG | - | chr6.1:477506-477525 | MS.gene82797:intron | 40.0% |
| AAAATTGGAGCATGGACCGT+CGG | + | chr6.1:479649-479668 | None:intergenic | 45.0% | |
| AATCTCCCCACAAAAGGACA+AGG | + | chr6.1:480497-480516 | None:intergenic | 45.0% | |
| ACTCTTGATCCAATGGCTAC+TGG | - | chr6.1:478873-478892 | MS.gene82797:intron | 45.0% | |
| AGAACCAGTGTTTCGGGAAA+AGG | + | chr6.1:479936-479955 | None:intergenic | 45.0% | |
| AGCCATTGGATCAAGAGTTC+CGG | + | chr6.1:478871-478890 | None:intergenic | 45.0% | |
| AGGACATGAGAAGGGGAAAA+GGG | + | chr6.1:481211-481230 | None:intergenic | 45.0% | |
| AGTAACGCAGTCTCAGCATT+CGG | + | chr6.1:477969-477988 | None:intergenic | 45.0% | |
| AGTGTGAATTTGTGGCAGGT+TGG | - | chr6.1:478712-478731 | MS.gene82797:intron | 45.0% | |
| AGTTGGAACACAGACCATCT+AGG | + | chr6.1:477905-477924 | None:intergenic | 45.0% | |
| ATAGCGAAGTGGCTACCTTT+AGG | + | chr6.1:477584-477603 | None:intergenic | 45.0% | |
| ATCAGCATCCCATGTTGAAG+TGG | + | chr6.1:479137-479156 | None:intergenic | 45.0% | |
| ATTTATCGTTGGCCCAGGAT+TGG | + | chr6.1:476722-476741 | None:intergenic | 45.0% | |
| CACATCGTACAGAGGTTGAA+GGG | + | chr6.1:479583-479602 | None:intergenic | 45.0% | |
| CAGAGAATCAAACAGAGCAG+AGG | + | chr6.1:479760-479779 | None:intergenic | 45.0% | |
| CAGGGATATTCGACAGACTA+GGG | + | chr6.1:481576-481595 | None:intergenic | 45.0% | |
| CGAATGAGAATGCGAATGCT+AGG | - | chr6.1:477261-477280 | MS.gene82797:intron | 45.0% | |
| CGAATGCGAATACTAGGGTT+AGG | - | chr6.1:477126-477145 | MS.gene82797:intron | 45.0% | |
| CGTTGGCAAGTCAACAAAAC+TGG | - | chr6.1:478911-478930 | MS.gene82797:intron | 45.0% | |
| GAAAAGGAAAAGGGGAAGAG+GGG | - | chr6.1:477395-477414 | MS.gene82797:intron | 45.0% | |
| GACTTTGCATAAGAGGGAAG+AGG | - | chr6.1:476932-476951 | MS.gene82797:intron | 45.0% | |
| GAGAAAAGGAAAAGGGGAAG+AGG | - | chr6.1:477393-477412 | MS.gene82797:intron | 45.0% | |
| GAGGTTGAAGGGTCCTTTAA+TGG | + | chr6.1:479572-479591 | None:intergenic | 45.0% | |
| GCTCTCCGAAGAGATTCAAT+TGG | - | chr6.1:482030-482049 | MS.gene82797:CDS | 45.0% | |
| GGGATGGTTAAGGGTTATAG+TGG | - | chr6.1:479091-479110 | MS.gene82797:intron | 45.0% | |
| GGGTTTGAATGTGAAGAAGG+AGG | - | chr6.1:477466-477485 | MS.gene82797:intron | 45.0% | |
| GGTTAATTTATCGTTGGCCC+AGG | + | chr6.1:476727-476746 | None:intergenic | 45.0% | |
| GTATGAGAAAGCAAGGAGAG+GGG | - | chr6.1:480853-480872 | MS.gene82797:intron | 45.0% | |
| GTTGAGGGTGAAGAGAAAGA+TGG | - | chr6.1:479810-479829 | MS.gene82797:CDS | 45.0% | |
| TAGACTACATTGCTGCAGTC+AGG | - | chr6.1:477861-477880 | MS.gene82797:CDS | 45.0% | |
| TAGGACATGAGAAGGGGAAA+AGG | + | chr6.1:481212-481231 | None:intergenic | 45.0% | |
| TCACATCGTACAGAGGTTGA+AGG | + | chr6.1:479584-479603 | None:intergenic | 45.0% | |
| TCGGTTTAATTCCGGTTCAG+TGG | + | chr6.1:476748-476767 | None:intergenic | 45.0% | |
| TCGTAACGAGGAACAATTGG+TGG | - | chr6.1:476881-476900 | MS.gene82797:intron | 45.0% | |
| TCGTCGTAACGAGGAACAAT+TGG | - | chr6.1:476878-476897 | MS.gene82797:intron | 45.0% | |
| TCTGCAAGAACCAGTGTTTC+GGG | + | chr6.1:479942-479961 | None:intergenic | 45.0% | |
| TGAGGAGAATGAGAAAGGTG+TGG | - | chr6.1:477367-477386 | MS.gene82797:intron | 45.0% | |
| TGATGATCATCGTCGTAACG+AGG | - | chr6.1:476869-476888 | MS.gene82797:CDS | 45.0% | |
| TGCGAACTATCCCAAACATG+AGG | + | chr6.1:477536-477555 | None:intergenic | 45.0% | |
| TGGCAAGTCAACAAAACTGG+TGG | - | chr6.1:478914-478933 | MS.gene82797:intron | 45.0% | |
| TTGCCAAATCTCCCCACAAA+AGG | + | chr6.1:480503-480522 | None:intergenic | 45.0% | |
| TTTGATGTTTGGACCTTGGG+CGG | - | chr6.1:480188-480207 | MS.gene82797:intron | 45.0% | |
| ! | AAGTGCCTTGTCCTTTTGTG+GGG | - | chr6.1:480489-480508 | MS.gene82797:intron | 45.0% |
| ! | AGTCAACAAAACTGGTGGAC+AGG | - | chr6.1:478919-478938 | MS.gene82797:intron | 45.0% |
| ! | CATGTTTGGGATAGTTCGCA+TGG | - | chr6.1:477536-477555 | MS.gene82797:intron | 45.0% |
| ! | GATCACTCTGTGCGGATTTT+GGG | - | chr6.1:481869-481888 | MS.gene82797:CDS | 45.0% |
| ! | GCCTGATCCAAACACTGATT+AGG | + | chr6.1:477044-477063 | None:intergenic | 45.0% |
| ! | GGAGGAACTTGGAGGATTTT+TGG | - | chr6.1:481522-481541 | MS.gene82797:CDS | 45.0% |
| ! | TATTTACAGGTTGGGCATGC+CGG | - | chr6.1:478849-478868 | MS.gene82797:intron | 45.0% |
| ! | TGGGTTGAAGAATCTGGAAG+AGG | + | chr6.1:476568-476587 | None:intergenic | 45.0% |
| ! | TGTCCTTTTGTGGGGAGATT+TGG | - | chr6.1:480497-480516 | MS.gene82797:intron | 45.0% |
| !! | ATAGTGGGGTTTTCCGCTTA+GGG | - | chr6.1:479107-479126 | MS.gene82797:intron | 45.0% |
| !! | CAAATTTTGACGAACCGGGT+CGG | + | chr6.1:476767-476786 | None:intergenic | 45.0% |
| !! | GGAGAATGGGTTGAAGAATC+TGG | + | chr6.1:476574-476593 | None:intergenic | 45.0% |
| !! | TATAGTGGGGTTTTCCGCTT+AGG | - | chr6.1:479106-479125 | MS.gene82797:intron | 45.0% |
| !! | TCACGCATCGCTTGTTATTG+GGG | - | chr6.1:481699-481718 | MS.gene82797:CDS | 45.0% |
| !!! | AGCCGTTTTTTAGTTCGAGG+AGG | - | chr6.1:477501-477520 | MS.gene82797:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr6.1:478331-478350 | MS.gene82797:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr6.1:478350-478331 | None:intergenic | 45.0% |
| !!! | GTTGGTGTTTTTGGTGTTGG+GGG | - | chr6.1:477299-477318 | MS.gene82797:intron | 45.0% |
| !!! | TTGGTGTTTTTGGTGTTGGG+GGG | - | chr6.1:477300-477319 | MS.gene82797:intron | 45.0% |
| !! | AATATATAAAATAATAATGA+TGG | - | chr6.1:481048-481067 | MS.gene82797:intron | 5.0% |
| AAAACTCCTCCCTCCAATCC+TGG | - | chr6.1:476706-476725 | MS.gene82797:intron | 50.0% | |
| AAACTCCTCCCTCCAATCCT+GGG | - | chr6.1:476707-476726 | MS.gene82797:intron | 50.0% | |
| AAATTGGAGCATGGACCGTC+GGG | + | chr6.1:479648-479667 | None:intergenic | 50.0% | |
| AAGCAAGGATTCCTGCCATC+AGG | + | chr6.1:478002-478021 | None:intergenic | 50.0% | |
| AATCTCTTCGGAGAGCCGTT+AGG | + | chr6.1:482026-482045 | None:intergenic | 50.0% | |
| AGGAAACGGAGAGTGGAGAA+TGG | + | chr6.1:476588-476607 | None:intergenic | 50.0% | |
| ATGGCAAGTTGCATTCTCGC+AGG | + | chr6.1:479689-479708 | None:intergenic | 50.0% | |
| ATGGGGTTGTGGAGAGGAAA+CGG | + | chr6.1:476602-476621 | None:intergenic | 50.0% | |
| CAGACAGCTGTTGACCTAGA+TGG | - | chr6.1:477888-477907 | MS.gene82797:intron | 50.0% | |
| CCAGGGATATTCGACAGACT+AGG | + | chr6.1:481577-481596 | None:intergenic | 50.0% | |
| CCTAGTCTGTCGAATATCCC+TGG | - | chr6.1:481574-481593 | MS.gene82797:CDS | 50.0% | |
| GAACCGGAATTAAACCGACC+CGG | - | chr6.1:476750-476769 | MS.gene82797:intron | 50.0% | |
| GAACTACGCACTGAAGAACG+TGG | + | chr6.1:479726-479745 | None:intergenic | 50.0% | |
| GACGGGACTTCCTCATGTTT+GGG | - | chr6.1:477523-477542 | MS.gene82797:intron | 50.0% | |
| GCAGCACTAAGTGACGGTTT+AGG | - | chr6.1:478482-478501 | MS.gene82797:intron | 50.0% | |
| GCTATGGCACTGTAGTGTAG+CGG | - | chr6.1:477772-477791 | MS.gene82797:intron | 50.0% | |
| GGAAACGGAGAGTGGAGAAT+GGG | + | chr6.1:476587-476606 | None:intergenic | 50.0% | |
| GGACCCACAACTAATGAAGC+AGG | + | chr6.1:480021-480040 | None:intergenic | 50.0% | |
| GGACTTTCAAGAGCTGGAAG+AGG | - | chr6.1:482163-482182 | MS.gene82797:CDS | 50.0% | |
| GGAGATGATACCGGAAGTTG+TGG | - | chr6.1:476902-476921 | MS.gene82797:intron | 50.0% | |
| GTCCTCAACTCCACAACTTC+CGG | + | chr6.1:476915-476934 | None:intergenic | 50.0% | |
| TACCGGAAGTTGTGGAGTTG+AGG | - | chr6.1:476910-476929 | MS.gene82797:intron | 50.0% | |
| TAGAGCGTAGCTTGGATGAC+AGG | - | chr6.1:480924-480943 | MS.gene82797:intron | 50.0% | |
| TAGCTGCTATCGTGGAGCTA+TGG | - | chr6.1:477756-477775 | MS.gene82797:intron | 50.0% | |
| TCGTCTTTGATGTGCTCCCA+TGG | + | chr6.1:480457-480476 | None:intergenic | 50.0% | |
| TGAGTGGTTAACCTGATGGC+AGG | - | chr6.1:477988-478007 | MS.gene82797:intron | 50.0% | |
| TGCATGGGACTTTCAAGAGC+TGG | - | chr6.1:482157-482176 | MS.gene82797:CDS | 50.0% | |
| TGCCGGAACTCTTGATCCAA+TGG | - | chr6.1:478866-478885 | MS.gene82797:intron | 50.0% | |
| TGGCAAGTTGCATTCTCGCA+GGG | + | chr6.1:479688-479707 | None:intergenic | 50.0% | |
| TGTCTGTAGGAGGAACTTGG+AGG | - | chr6.1:481514-481533 | MS.gene82797:CDS | 50.0% | |
| TGTTGGGGGGAAGAAAGATG+AGG | - | chr6.1:477313-477332 | MS.gene82797:intron | 50.0% | |
| TTGTAGTTGCGCCCACCTAA+CGG | - | chr6.1:482008-482027 | MS.gene82797:CDS | 50.0% | |
| ! | AGGCAAAAAGGGGCACAGAA+CGG | + | chr6.1:480967-480986 | None:intergenic | 50.0% |
| ! | ATGGGAGCACATCAAAGACG+AGG | - | chr6.1:480456-480475 | MS.gene82797:intron | 50.0% |
| ! | CGATCACTCTGTGCGGATTT+TGG | - | chr6.1:481868-481887 | MS.gene82797:CDS | 50.0% |
| ! | GAACCGGGTCGGTTTAATTC+CGG | + | chr6.1:476756-476775 | None:intergenic | 50.0% |
| ! | GATTGGAGGGAGGAGTTTTG+AGG | + | chr6.1:476705-476724 | None:intergenic | 50.0% |
| ! | TAGTGGGGTTTTCCGCTTAG+GGG | - | chr6.1:479108-479127 | MS.gene82797:intron | 50.0% |
| ! | TGCACCTTTTCCCGAAACAC+TGG | - | chr6.1:479929-479948 | MS.gene82797:intron | 50.0% |
| ! | TTAGCGGTTCGAGTGGGTTT+GGG | + | chr6.1:476666-476685 | None:intergenic | 50.0% |
| ! | TTGAAGAGGGTATGGGGTTG+TGG | + | chr6.1:476613-476632 | None:intergenic | 50.0% |
| ! | TTTAGCGGTTCGAGTGGGTT+TGG | + | chr6.1:476667-476686 | None:intergenic | 50.0% |
| !! | ACTCTGTGCGGATTTTGGGA+AGG | - | chr6.1:481873-481892 | MS.gene82797:CDS | 50.0% |
| !! | ATTTTGGGAAGGCTCTTGGC+AGG | - | chr6.1:481884-481903 | MS.gene82797:CDS | 50.0% |
| AATTGGAGCATGGACCGTCG+GGG | + | chr6.1:479647-479666 | None:intergenic | 55.0% | |
| ACGCGAGTCACATCGTACAG+AGG | + | chr6.1:479591-479610 | None:intergenic | 55.0% | |
| ACTTCGTCTGTCATCCCCGA+CGG | - | chr6.1:479630-479649 | MS.gene82797:intron | 55.0% | |
| AGGGGAGGCCACTTCAACAT+GGG | - | chr6.1:479126-479145 | MS.gene82797:intron | 55.0% | |
| AGGTCATTCAGCGTGAGCCA+TGG | - | chr6.1:480437-480456 | MS.gene82797:intron | 55.0% | |
| ATCGTTGGCCCAGGATTGGA+GGG | + | chr6.1:476718-476737 | None:intergenic | 55.0% | |
| GACGAAGTCGCAGCATACAG+AGG | + | chr6.1:479618-479637 | None:intergenic | 55.0% | |
| GCTGAGACTGCGTTACTGAG+TGG | - | chr6.1:477972-477991 | MS.gene82797:intron | 55.0% | |
| GGACGGGACTTCCTCATGTT+TGG | - | chr6.1:477522-477541 | MS.gene82797:intron | 55.0% | |
| GGGGGGAAGAAAGATGAGGT+TGG | - | chr6.1:477317-477336 | MS.gene82797:intron | 55.0% | |
| GGTCATTCAGCGTGAGCCAT+GGG | - | chr6.1:480438-480457 | MS.gene82797:intron | 55.0% | |
| TAGGGGAGGCCACTTCAACA+TGG | - | chr6.1:479125-479144 | MS.gene82797:intron | 55.0% | |
| TATCGTTGGCCCAGGATTGG+AGG | + | chr6.1:476719-476738 | None:intergenic | 55.0% | |
| TCACCCTCAACCACACACAG+TGG | + | chr6.1:479801-479820 | None:intergenic | 55.0% | |
| TCGCGTTTAGCGGTTCGAGT+GGG | + | chr6.1:476672-476691 | None:intergenic | 55.0% | |
| TCTTCGGAGAGCCGTTAGGT+GGG | + | chr6.1:482022-482041 | None:intergenic | 55.0% | |
| TGGGTTTGGGGAGATTGGGA+CGG | + | chr6.1:476653-476672 | None:intergenic | 55.0% | |
| TGTGGAGAGGAAACGGAGAG+TGG | + | chr6.1:476595-476614 | None:intergenic | 55.0% | |
| TTCGCGTTTAGCGGTTCGAG+TGG | + | chr6.1:476673-476692 | None:intergenic | 55.0% | |
| TTGAAGTGGCCTCCCCTAAG+CGG | + | chr6.1:479123-479142 | None:intergenic | 55.0% | |
| ! | CAAAAAGGGGCACAGAACGG+AGG | + | chr6.1:480964-480983 | None:intergenic | 55.0% |
| ! | CGAGTGGGTTTGGGGAGATT+GGG | + | chr6.1:476657-476676 | None:intergenic | 55.0% |
| ! | TAGCGGTTCGAGTGGGTTTG+GGG | + | chr6.1:476665-476684 | None:intergenic | 55.0% |
| ! | TCGAGTGGGTTTGGGGAGAT+TGG | + | chr6.1:476658-476677 | None:intergenic | 55.0% |
| !! | GCGGATTTTGGGAAGGCTCT+TGG | - | chr6.1:481880-481899 | MS.gene82797:CDS | 55.0% |
| !! | TGGGGTTGGTTCGCGTTTAG+CGG | + | chr6.1:476682-476701 | None:intergenic | 55.0% |
| !!! | GAGGAGTTTTGAGGTGGGGT+TGG | + | chr6.1:476696-476715 | None:intergenic | 55.0% |
| !!! | GAGGGAGGAGTTTTGAGGTG+GGG | + | chr6.1:476700-476719 | None:intergenic | 55.0% |
| !!! | GGAGGGAGGAGTTTTGAGGT+GGG | + | chr6.1:476701-476720 | None:intergenic | 55.0% |
| !!! | TGGAGGGAGGAGTTTTGAGG+TGG | + | chr6.1:476702-476721 | None:intergenic | 55.0% |
| AGAACGTGGCAGAGGCAGAG+AGG | + | chr6.1:479712-479731 | None:intergenic | 60.0% | |
| CCCTCAACCACACACAGTGG+CGG | + | chr6.1:479798-479817 | None:intergenic | 60.0% | |
| CCGCCACTGTGTGTGGTTGA+GGG | - | chr6.1:479795-479814 | MS.gene82797:CDS | 60.0% | |
| CGCACTGAAGAACGTGGCAG+AGG | + | chr6.1:479720-479739 | None:intergenic | 60.0% | |
| CTCTGATCCGCCACTGTGTG+TGG | - | chr6.1:479788-479807 | MS.gene82797:CDS | 60.0% | |
| CTCTTCGGAGAGCCGTTAGG+TGG | + | chr6.1:482023-482042 | None:intergenic | 60.0% | |
| GGAAAAGGGGAAGAGGGGTG+TGG | - | chr6.1:477400-477419 | MS.gene82797:intron | 60.0% | |
| TCCGCCACTGTGTGTGGTTG+AGG | - | chr6.1:479794-479813 | MS.gene82797:CDS | 60.0% | |
| ! | GAGGGTATGGGGTTGTGGAG+AGG | + | chr6.1:476608-476627 | None:intergenic | 60.0% |
| ! | TGGGGTTTTCCGCTTAGGGG+AGG | - | chr6.1:479111-479130 | MS.gene82797:intron | 60.0% |
| !! | CACACACAGTGGCGGATCAG+AGG | + | chr6.1:479790-479809 | None:intergenic | 60.0% |
| CGTGGCAGAGGCAGAGAGGA+TGG | + | chr6.1:479708-479727 | None:intergenic | 65.0% | |
| GTTGGCCCAGGATTGGAGGG+AGG | + | chr6.1:476715-476734 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 476510 | 482208 | 476510 | ID=MS.gene82797 |
| chr6.1 | mRNA | 476510 | 482208 | 476510 | ID=MS.gene82797.t1;Parent=MS.gene82797 |
| chr6.1 | exon | 481131 | 482208 | 481131 | ID=MS.gene82797.t1.exon1;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 481131 | 482208 | 481131 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 479933 | 479988 | 479933 | ID=MS.gene82797.t1.exon2;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 479933 | 479988 | 479933 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 479778 | 479860 | 479778 | ID=MS.gene82797.t1.exon3;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 479778 | 479860 | 479778 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 479556 | 479634 | 479556 | ID=MS.gene82797.t1.exon4;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 479556 | 479634 | 479556 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 478169 | 478279 | 478169 | ID=MS.gene82797.t1.exon5;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 478169 | 478279 | 478169 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 477773 | 477882 | 477773 | ID=MS.gene82797.t1.exon6;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 477773 | 477882 | 477773 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 476813 | 476896 | 476813 | ID=MS.gene82797.t1.exon7;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 476813 | 476896 | 476813 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 476667 | 476704 | 476667 | ID=MS.gene82797.t1.exon8;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 476667 | 476704 | 476667 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| chr6.1 | exon | 476510 | 476580 | 476510 | ID=MS.gene82797.t1.exon9;Parent=MS.gene82797.t1 |
| chr6.1 | CDS | 476510 | 476580 | 476510 | ID=cds.MS.gene82797.t1;Parent=MS.gene82797.t1 |
| Gene Sequence |
| Protein sequence |
