AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82880.t1 MTR_6g005760 95.126 595 29 0 28 622 10 604 0.0 1138
MS.gene82880.t1 MTR_6g005760 96.218 476 18 0 147 622 1 476 0.0 942
MS.gene82880.t1 MTR_4g077880 73.239 568 151 1 55 621 43 610 0.0 835
MS.gene82880.t1 MTR_6g005760 94.159 428 25 0 28 455 10 437 0.0 810
MS.gene82880.t1 MTR_5g020530 60.862 580 211 5 50 618 50 624 0.0 677
MS.gene82880.t1 MTR_4g077880 68.080 401 128 0 55 455 43 443 0.0 546
MS.gene82880.t1 MTR_8g099065 28.502 207 118 5 380 581 570 751 1.03e-15 81.3
MS.gene82880.t1 MTR_3g112260 33.553 152 93 5 380 524 172 322 2.70e-15 78.6
MS.gene82880.t1 MTR_3g092080 34.868 152 92 5 379 525 120 269 3.06e-15 78.2
MS.gene82880.t1 MTR_3g089100 30.622 209 111 6 380 581 968 1149 3.08e-15 80.1
MS.gene82880.t1 MTR_3g089100 30.622 209 111 6 380 581 939 1120 3.19e-15 80.1
MS.gene82880.t1 MTR_3g089100 30.622 209 111 6 380 581 934 1115 3.32e-15 80.1
MS.gene82880.t1 MTR_3g092080 34.868 152 92 5 379 525 120 269 3.42e-15 78.2
MS.gene82880.t1 MTR_3g117230 33.553 152 93 5 380 524 175 325 4.85e-15 77.8
MS.gene82880.t1 MTR_7g101870 29.577 213 116 8 375 579 510 696 5.62e-15 79.0
MS.gene82880.t1 MTR_7g101870 30.872 149 98 4 380 524 242 389 6.84e-14 75.5
MS.gene82880.t1 MTR_1g088730 29.665 209 113 6 380 581 969 1150 6.74e-15 79.0
MS.gene82880.t1 MTR_1g101870 35.714 154 91 4 380 527 594 745 8.10e-15 78.6
MS.gene82880.t1 MTR_1g101870 35.714 154 91 4 380 527 542 693 8.45e-15 78.6
MS.gene82880.t1 MTR_1g088750 29.665 209 113 6 380 581 926 1107 8.92e-15 78.6
MS.gene82880.t1 MTR_1g063380 29.245 212 118 8 375 579 509 695 8.98e-15 78.2
MS.gene82880.t1 MTR_1g063380 30.872 149 98 4 380 524 241 388 1.90e-13 73.9
MS.gene82880.t1 MTR_1g088750 29.665 209 113 6 380 581 975 1156 9.77e-15 78.6
MS.gene82880.t1 MTR_4g053350 28.019 207 121 5 380 582 162 344 1.53e-14 76.6
MS.gene82880.t1 MTR_5g009840 28.502 207 118 5 380 581 552 733 1.56e-14 77.8
MS.gene82880.t1 MTR_4g053350 28.019 207 121 5 380 582 162 344 1.63e-14 76.6
MS.gene82880.t1 MTR_2g095210 31.875 160 101 5 375 527 437 595 1.74e-14 77.4
MS.gene82880.t1 MTR_2g024440 33.766 154 97 4 382 532 260 411 1.82e-14 76.6
MS.gene82880.t1 MTR_4g094270 31.683 202 105 8 382 575 194 370 1.83e-14 76.3
MS.gene82880.t1 MTR_2g024440 33.766 154 97 4 382 532 343 494 1.87e-14 77.0
MS.gene82880.t1 MTR_3g092070 32.911 158 87 4 379 525 117 266 1.91e-14 75.9
MS.gene82880.t1 MTR_2g024440 33.766 154 97 4 382 532 342 493 1.96e-14 77.0
MS.gene82880.t1 MTR_6g033740 32.468 154 96 4 380 527 536 687 3.04e-14 76.6
MS.gene82880.t1 MTR_1g083330 35.032 157 94 5 375 524 198 353 3.22e-14 75.5
MS.gene82880.t1 MTR_2g086160 27.363 201 118 5 380 576 167 343 3.48e-14 74.7
MS.gene82880.t1 MTR_4g033235 35.032 157 94 5 375 524 199 354 4.16e-14 75.1
MS.gene82880.t1 MTR_2g086160 27.053 207 123 5 380 582 167 349 5.45e-14 75.1
MS.gene82880.t1 MTR_3g092070 33.766 154 91 4 379 525 117 266 6.72e-14 73.6
MS.gene82880.t1 MTR_4g011810 27.488 211 117 6 380 579 277 462 7.70e-14 74.7
MS.gene82880.t1 MTR_1g099480 33.333 153 96 4 380 527 505 656 3.44e-13 73.2
MS.gene82880.t1 MTR_2g095320 30.201 149 99 4 380 524 185 332 4.54e-13 72.8
MS.gene82880.t1 MTR_8g056860 31.847 157 89 4 382 524 507 659 2.67e-12 70.5
MS.gene82880.t1 MTR_6g023875 28.436 211 114 8 378 579 415 597 3.02e-12 70.1
MS.gene82880.t1 MTR_8g099065 32.308 130 82 3 380 504 570 698 5.02e-12 69.3
MS.gene82880.t1 MTR_7g089040 27.830 212 122 7 374 579 715 901 8.48e-12 68.9
MS.gene82880.t1 MTR_7g075520 26.872 227 147 6 380 589 247 471 2.42e-11 66.6
MS.gene82880.t1 MTR_8g099605 31.515 165 97 5 375 524 434 597 3.57e-11 67.0
MS.gene82880.t1 MTR_2g007010 33.537 164 97 7 380 534 273 433 4.22e-11 66.6
MS.gene82880.t1 MTR_8g099605 31.515 165 97 5 375 524 193 356 4.52e-11 66.2
MS.gene82880.t1 MTR_7g010800 28.641 206 113 7 382 579 243 422 5.07e-11 66.2
MS.gene82880.t1 MTR_7g088830 27.652 264 149 12 366 618 684 916 5.64e-11 66.2
MS.gene82880.t1 MTR_3g023890 27.315 216 138 7 385 596 426 626 7.08e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82880.t1 AT3G03060 74.653 576 140 3 48 620 54 626 0.0 890
MS.gene82880.t1 AT5G16930 71.026 604 163 4 28 620 36 638 0.0 879
MS.gene82880.t1 AT2G18330 63.558 579 202 5 46 617 52 628 0.0 697
MS.gene82880.t1 AT4G36580 61.082 573 216 4 50 618 54 623 0.0 680
MS.gene82880.t1 AT3G19740 31.481 216 109 9 380 587 738 922 9.52e-19 91.3
MS.gene82880.t1 AT1G50140 30.841 214 113 7 380 587 748 932 2.24e-18 90.1
MS.gene82880.t1 AT1G50140 30.841 214 113 7 380 587 748 932 2.24e-18 90.1
MS.gene82880.t1 AT1G50140 30.841 214 113 7 380 587 748 932 2.24e-18 90.1
MS.gene82880.t1 AT1G50140 30.841 214 113 7 380 587 726 910 2.45e-18 90.1
MS.gene82880.t1 AT1G50140 30.841 214 113 7 380 587 726 910 2.45e-18 90.1
MS.gene82880.t1 AT5G19990 32.673 202 103 8 382 575 196 372 6.06e-16 80.9
MS.gene82880.t1 AT5G19990 32.673 202 103 8 382 575 196 372 6.06e-16 80.9
MS.gene82880.t1 AT5G19990 32.673 202 103 8 382 575 138 314 7.46e-16 80.1
MS.gene82880.t1 AT5G20000 32.673 202 103 8 382 575 196 372 8.22e-16 80.5
MS.gene82880.t1 AT3G53230 30.047 213 115 9 375 579 509 695 1.11e-15 81.3
MS.gene82880.t1 AT3G53230 30.872 149 98 4 380 524 241 388 1.11e-13 75.1
MS.gene82880.t1 AT1G45000 33.553 152 93 5 380 524 172 322 1.35e-15 79.7
MS.gene82880.t1 AT4G04180 36.601 153 79 5 382 524 362 506 1.58e-15 80.5
MS.gene82880.t1 AT4G04180 36.601 153 79 5 382 524 357 501 1.64e-15 80.5
MS.gene82880.t1 AT5G03340 30.516 213 114 9 375 579 508 694 4.62e-15 79.3
MS.gene82880.t1 AT5G03340 30.872 149 98 4 380 524 240 387 2.60e-13 73.6
MS.gene82880.t1 AT5G53540 35.065 154 89 4 379 525 120 269 6.07e-15 77.8
MS.gene82880.t1 AT1G02890 29.665 209 113 6 380 581 978 1159 6.16e-15 79.3
MS.gene82880.t1 AT1G53750 27.799 259 151 10 290 524 105 351 6.41e-15 77.8
MS.gene82880.t1 AT5G43010 32.895 152 94 5 380 524 172 322 8.03e-15 77.4
MS.gene82880.t1 AT4G28000 32.692 156 93 4 380 527 553 704 8.56e-15 78.6
MS.gene82880.t1 AT4G28000 32.692 156 93 4 380 527 551 702 9.14e-15 78.6
MS.gene82880.t1 AT4G28000 32.692 156 93 4 380 527 553 704 9.31e-15 78.6
MS.gene82880.t1 AT1G53780 34.810 158 95 5 374 524 367 523 1.40e-14 77.4
MS.gene82880.t1 AT1G53780 34.810 158 95 5 374 524 367 523 1.40e-14 77.4
MS.gene82880.t1 AT3G09840 29.577 213 117 9 375 579 508 695 1.41e-14 77.8
MS.gene82880.t1 AT3G09840 30.872 149 98 4 380 524 240 387 2.51e-13 73.9
MS.gene82880.t1 AT1G53780 34.810 158 95 5 374 524 388 544 1.55e-14 77.4
MS.gene82880.t1 AT1G53780 34.810 158 95 5 374 524 366 522 1.68e-14 77.4
MS.gene82880.t1 AT1G64110 32.051 156 94 4 380 527 554 705 1.73e-14 77.4
MS.gene82880.t1 AT1G64110 32.051 156 94 4 380 527 554 705 1.73e-14 77.4
MS.gene82880.t1 AT1G64110 32.051 156 94 4 380 527 549 700 1.91e-14 77.4
MS.gene82880.t1 AT1G64110 32.051 156 94 4 380 527 552 703 1.99e-14 77.4
MS.gene82880.t1 AT1G64110 32.051 156 94 4 380 527 552 703 1.99e-14 77.4
MS.gene82880.t1 AT4G02480 29.665 209 113 6 380 581 997 1178 2.25e-14 77.4
MS.gene82880.t1 AT4G27680 36.129 155 86 6 379 525 117 266 2.54e-14 75.9
MS.gene82880.t1 AT5G52882 33.117 154 95 4 380 527 550 701 2.76e-14 77.0
MS.gene82880.t1 AT1G09100 35.032 157 94 5 375 524 198 353 1.12e-13 73.9
MS.gene82880.t1 AT3G05530 34.395 157 95 5 375 524 199 354 2.67e-13 72.8
MS.gene82880.t1 AT2G27600 26.570 207 124 5 380 582 164 346 3.07e-13 72.8
MS.gene82880.t1 AT4G24860 28.708 209 115 6 380 581 852 1033 3.42e-13 73.6
MS.gene82880.t1 AT4G24860 28.708 209 115 6 380 581 854 1035 3.48e-13 73.6
MS.gene82880.t1 AT1G80350 27.488 211 117 6 380 579 271 456 3.94e-13 72.8
MS.gene82880.t1 AT4G24860 28.708 209 115 6 380 581 850 1031 4.12e-13 73.2
MS.gene82880.t1 AT4G24860 28.708 209 115 6 380 581 827 1008 4.31e-13 73.2
MS.gene82880.t1 AT1G79560 26.073 303 169 12 344 619 485 759 5.49e-13 72.8
MS.gene82880.t1 AT1G79560 26.073 303 169 12 344 619 485 759 6.42e-13 72.8
MS.gene82880.t1 AT1G79560 26.073 303 169 12 344 619 485 759 6.89e-13 72.4
MS.gene82880.t1 AT3G02450 34.228 149 91 5 382 525 368 514 1.21e-12 71.2
MS.gene82880.t1 AT1G62130 29.064 203 110 6 380 581 780 949 2.42e-12 70.9
MS.gene82880.t1 AT1G62130 29.064 203 110 6 380 581 787 956 2.45e-12 70.9
MS.gene82880.t1 AT3G27120 28.436 211 114 7 378 579 433 615 2.98e-12 70.1
MS.gene82880.t1 AT3G56690 28.155 206 118 7 380 580 417 597 4.32e-11 66.6

Find 148 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGGAATTACATCGATTT+TGG 0.148803 6.1:+1591838 MS.gene82880:CDS
GCCATTGTCTTCCCTGTTCC+TGG 0.205135 6.1:-1596289 None:intergenic
TCAAATAATGGAAAGGGTTT+TGG 0.219162 6.1:+1596154 MS.gene82880:CDS
GGGAAGGTGCACGGGTTATT+TGG 0.224243 6.1:+1596002 MS.gene82880:intron
GGGATATGTTGATAGAATAT+TGG 0.232274 6.1:+1596024 MS.gene82880:CDS
CCAGAATCTGTTTCAAATAA+TGG 0.246142 6.1:+1596142 MS.gene82880:CDS
GCCATTCCTTCTTCATCTTC+TGG 0.246429 6.1:+1592637 MS.gene82880:CDS
GGAAGGTGCACGGGTTATTT+GGG 0.252159 6.1:+1596003 MS.gene82880:CDS
CCATTATTTGAAACAGATTC+TGG 0.258534 6.1:-1596142 None:intergenic
TGCTTCATCATATGCTAAAA+AGG 0.263247 6.1:+1592765 MS.gene82880:CDS
AATACTACCTTTGACCATAT+TGG 0.291759 6.1:+1595304 MS.gene82880:CDS
CCACAAAAGATAGAGATTAA+AGG 0.293367 6.1:+1597585 MS.gene82880:CDS
CCGTGAAGTTGTAGATTATA+AGG 0.298092 6.1:+1597743 MS.gene82880:CDS
TAAACCCCTATTGGACTTCT+TGG 0.299729 6.1:-1597044 None:intergenic
GTCCTAGAATTTCCCTTGCC+TGG 0.304734 6.1:+1597462 MS.gene82880:CDS
AATCCAAGGAGTGCTTCTTC+TGG 0.327589 6.1:+1592691 MS.gene82880:CDS
GCTCTTGGTTCCTTACTCTA+TGG 0.329815 6.1:-1595033 None:intergenic
GCATCAACAAAGAATAAAAT+TGG 0.330618 6.1:+1597773 MS.gene82880:CDS
GGCGGTGGTGGCGGCGGTTA+AGG 0.332054 6.1:-1592593 None:intergenic
CCCCAGGCAAGGGAAATTCT+AGG 0.335721 6.1:-1597464 None:intergenic
CAGTTTCGCTATTTCCCTTC+CGG 0.338361 6.1:-1597658 None:intergenic
GGAAACAAGGCAAGCTGAAT+TGG 0.344892 6.1:+1592986 MS.gene82880:CDS
GATCCTGAACCTCTTGAAAA+AGG 0.346940 6.1:+1592718 MS.gene82880:CDS
GGATATGTTGATAGAATATT+GGG 0.347459 6.1:+1596025 MS.gene82880:CDS
GGAGTGACTGCTCTGGCAGC+CGG 0.356065 6.1:+1595740 MS.gene82880:CDS
TGATTTCATGGAGGTGAGTT+GGG 0.372960 6.1:+1591821 None:intergenic
AGAGACGGTGGCGGTGGTGG+CGG 0.374239 6.1:-1592602 None:intergenic
CAAGCTGGATCAAGAAAATC+TGG 0.381037 6.1:+1597537 MS.gene82880:CDS
AAGTCGAGAAAGGGTGCTTT+TGG 0.394444 6.1:-1596113 None:intergenic
TTGGGTTGAAATCAGGTTAA+GGG 0.399695 6.1:+1591857 MS.gene82880:CDS
GAGTGACTGCTCTGGCAGCC+GGG 0.400139 6.1:+1595741 MS.gene82880:CDS
TAATCGAATGAAAGCACAAT+TGG 0.409012 6.1:+1593028 MS.gene82880:CDS
TCCTAGAATTTCCCTTGCCT+GGG 0.409654 6.1:+1597463 MS.gene82880:CDS
ATTGGGCCAAGAAGTCCAAT+AGG 0.417609 6.1:+1597038 MS.gene82880:CDS
CTTATTACGATCTGTTAGAA+TGG 0.422073 6.1:-1595699 None:intergenic
GATACACGAGTTGTTTGATT+GGG 0.423129 6.1:+1597021 MS.gene82880:CDS
GAAAGAGACGGTGGCGGTGG+TGG 0.423161 6.1:-1592605 None:intergenic
TTTGGGTTGAAATCAGGTTA+AGG 0.423578 6.1:+1591856 MS.gene82880:CDS
GACGGTGGCGGTGGTGGCGG+CGG 0.424736 6.1:-1592599 None:intergenic
ATTTCCCTTGCCTGGGGAAG+AGG 0.433738 6.1:+1597470 MS.gene82880:CDS
AGTGTCCAAGCTGCCGTGTA+TGG 0.437138 6.1:+1597687 MS.gene82880:CDS
ACAGCACTTGCAAAAGCAAA+AGG 0.438572 6.1:+1595187 MS.gene82880:CDS
CAGAGAGTTGGCTTACAAAT+CGG 0.447484 6.1:+1596315 MS.gene82880:CDS
TTGGGCCAAGAAGTCCAATA+GGG 0.448894 6.1:+1597039 MS.gene82880:CDS
CAAGGACTATGTCTTTAGAT+TGG 0.454660 6.1:-1597380 None:intergenic
TCTGTTTCAAATAATGGAAA+GGG 0.454708 6.1:+1596148 MS.gene82880:CDS
GTGATTTCATGGAGGTGAGT+TGG 0.455330 6.1:+1591820 None:intergenic
CCTTATAATCTACAACTTCA+CGG 0.459905 6.1:-1597743 None:intergenic
CTGGTTTAGCAAGTCGAGAA+AGG 0.462717 6.1:-1596123 None:intergenic
AGATACACGAGTTGTTTGAT+TGG 0.464111 6.1:+1597020 MS.gene82880:CDS
TCGAGAAAACGTGCCAGACC+AGG 0.465385 6.1:-1596089 None:intergenic
AGACCAGGGGTATTTCCCTC+TGG 0.471013 6.1:-1596074 None:intergenic
ATTGAGCGATGATATCATAA+AGG 0.472275 6.1:+1597608 MS.gene82880:CDS
GCCCTTGCGACGAACCGTCC+TGG 0.475674 6.1:+1597402 MS.gene82880:CDS
ATCTCAGATGGCTAAATATG+AGG 0.478813 6.1:+1594885 MS.gene82880:CDS
CTAAATCACCCTTCTCAAGT+TGG 0.479623 6.1:-1595255 None:intergenic
AGGATGAGTTGGCAAGGAAG+AGG 0.479629 6.1:+1594905 MS.gene82880:CDS
CACCAGGACGGTTCGTCGCA+AGG 0.481861 6.1:-1597404 None:intergenic
CGCTTCCATACACGGCAGCT+TGG 0.482291 6.1:-1597692 None:intergenic
ACCCACTTTCGAAGATGAAT+CGG 0.488735 6.1:-1592662 None:intergenic
TGTTGCTCCACTCGGATCAC+AGG 0.494047 6.1:+1596988 MS.gene82880:CDS
AAAATGAGTACCATAGAGTA+AGG 0.494834 6.1:+1595023 MS.gene82880:CDS
TTGTCTTCCCTGTTCCTGGA+GGG 0.498774 6.1:-1596285 None:intergenic
GGCTAAATATGAGGATGAGT+TGG 0.500126 6.1:+1594894 MS.gene82880:CDS
AGAGGGAAATACCCCTGGTC+TGG 0.500897 6.1:+1596076 MS.gene82880:CDS
TGAAAACACAAAATTACATC+AGG 0.504750 6.1:+1596234 MS.gene82880:CDS
CGCTCCTCTTCCCCAGGCAA+GGG 0.507955 6.1:-1597474 None:intergenic
GACGGTTCGTCGCAAGGGCA+AGG 0.508323 6.1:-1597398 None:intergenic
TGAAGAAGGAATGGCGCCAT+CGG 0.514941 6.1:-1592629 None:intergenic
GCAAGCTGAATTGGCTGCTA+AGG 0.515586 6.1:+1592995 MS.gene82880:CDS
ATTTCCCTCTGGAGGACTCT+CGG 0.515937 6.1:-1596063 None:intergenic
ATCTGTTTCAAATAATGGAA+AGG 0.518634 6.1:+1596147 MS.gene82880:CDS
ACTACGAAAGCAAACTATAG+AGG 0.520051 6.1:+1595129 MS.gene82880:CDS
AATCCAGAAGAAGCACTCCT+TGG 0.521894 6.1:-1592694 None:intergenic
CGATTTGTAAGCCAACTCTC+TGG 0.521968 6.1:-1596314 None:intergenic
GACAAGTACATAGCTCAAGC+TGG 0.523738 6.1:+1597522 MS.gene82880:CDS
TGGTTTAGCAAGTCGAGAAA+GGG 0.525545 6.1:-1596122 None:intergenic
ACGCTCCTCTTCCCCAGGCA+AGG 0.527101 6.1:-1597475 None:intergenic
TCTAACAGATCGTAATAAGT+TGG 0.527875 6.1:+1595703 MS.gene82880:CDS
GAGGACTCTCGGATCAATGA+TGG 0.530746 6.1:-1596052 None:intergenic
CTTGAGCTATGTACTTGTCT+AGG 0.530944 6.1:-1597518 None:intergenic
GGAGAAAGAGACGGTGGCGG+TGG 0.532338 6.1:-1592608 None:intergenic
ACCAGGACGGTTCGTCGCAA+GGG 0.533090 6.1:-1597403 None:intergenic
GAAGGTGCACGGGTTATTTG+GGG 0.534601 6.1:+1596004 MS.gene82880:CDS
TTGGATTATGCATTGATGAC+TGG 0.537644 6.1:+1596959 MS.gene82880:CDS
TTCCCTTCCGGAAAATCCAT+CGG 0.538043 6.1:-1597646 None:intergenic
CCTCCAGAGGGAAATACCCC+TGG 0.539942 6.1:+1596071 MS.gene82880:CDS
CTAATGTAGGGAAGGTGCAC+GGG 0.540661 6.1:+1595994 MS.gene82880:intron
AACCGATTCATCTTCGAAAG+TGG 0.541785 6.1:+1592660 MS.gene82880:CDS
AAGTTGGTCGTAACAGTTGG+TGG 0.542001 6.1:+1595719 MS.gene82880:CDS
TGAGATATTGAAGAAACAAG+AGG 0.542015 6.1:+1592965 MS.gene82880:CDS
ACTACCTTTGACCATATTGG+AGG 0.546392 6.1:+1595307 MS.gene82880:CDS
TTAAAACGCTCCTCTTCCCC+AGG 0.548339 6.1:-1597480 None:intergenic
GACAATGGCTGCCAGAGAGT+TGG 0.552771 6.1:+1596303 MS.gene82880:CDS
TAGTAAGAGAATTGAGCAGC+TGG 0.554062 6.1:+1596201 MS.gene82880:CDS
CCTAATGTAGGGAAGGTGCA+CGG 0.555109 6.1:+1595993 MS.gene82880:intron
CAGGAGAAACCAACTTGAGA+AGG 0.557237 6.1:+1595246 MS.gene82880:CDS
AATGCCCTTCTCTTTCGTAC+CGG 0.559914 6.1:+1597354 MS.gene82880:CDS
ATTGTCTTCCCTGTTCCTGG+AGG 0.560179 6.1:-1596286 None:intergenic
AAAGCAAACTATAGAGGAGA+AGG 0.564579 6.1:+1595135 MS.gene82880:CDS
GTTGGCAAGGAAGAGGATGC+AGG 0.565436 6.1:+1594912 MS.gene82880:CDS
AGAAGATTCATCAATCAGAC+TGG 0.565440 6.1:+1595069 MS.gene82880:CDS
GGAGGAGATGTTGCTCCACT+CGG 0.565757 6.1:+1596980 MS.gene82880:CDS
ATTCTAGGACCTCATCAATA+CGG 0.565931 6.1:-1597449 None:intergenic
GCCACCGTCTCTTTCTCCGA+TGG 0.566191 6.1:+1592613 MS.gene82880:CDS
AGTGACTGCTCTGGCAGCCG+GGG 0.566373 6.1:+1595742 MS.gene82880:CDS
GGTCTGCTACAGCTGAATCA+AGG 0.566819 6.1:-1597428 None:intergenic
TCCAGAAGATGAAGAAGGAA+TGG 0.573025 6.1:-1592638 None:intergenic
TCAATTCTCTTACTAAGAGA+AGG 0.575379 6.1:-1596193 None:intergenic
TTTACCTCCAATATGGTCAA+AGG 0.577286 6.1:-1595311 None:intergenic
CAGCACTTGCAAAAGCAAAA+GGG 0.577360 6.1:+1595188 MS.gene82880:CDS
AGTTGGTGGAGTGACTGCTC+TGG 0.577512 6.1:+1595733 MS.gene82880:CDS
TGAAGAAACAAGAGGAAACA+AGG 0.578075 6.1:+1592973 MS.gene82880:CDS
TCGGTTCCAGAAGATGAAGA+AGG 0.579097 6.1:-1592643 None:intergenic
AATAAGTTGGTCGTAACAGT+TGG 0.580574 6.1:+1595716 MS.gene82880:CDS
ACAGTTGTCGCTTCCATACA+CGG 0.583469 6.1:-1597700 None:intergenic
CGAGAAAACGTGCCAGACCA+GGG 0.583981 6.1:-1596088 None:intergenic
ACCGATTCATCTTCGAAAGT+GGG 0.593218 6.1:+1592661 MS.gene82880:CDS
ATACCTTGTTGTGTAGACCC+CGG 0.606322 6.1:-1595759 None:intergenic
GGTCACCGGTACGAAAGAGA+AGG 0.606869 6.1:-1597359 None:intergenic
AGGAGAAACCAACTTGAGAA+GGG 0.608125 6.1:+1595247 MS.gene82880:CDS
GGCACAAACAAAATCTCAGA+TGG 0.613066 6.1:+1594873 MS.gene82880:CDS
AATATGAGGATGAGTTGGCA+AGG 0.615642 6.1:+1594899 MS.gene82880:CDS
CACGGAACAAGCTTGCGTCA+AGG 0.619585 6.1:-1597725 None:intergenic
CAGCCGGGGTCTACACAACA+AGG 0.619731 6.1:+1595756 MS.gene82880:CDS
GAAGCCGCAGCTAAAACCGA+TGG 0.622294 6.1:+1597630 MS.gene82880:CDS
CTACGAAGACGACATGGTGA+AGG 0.628592 6.1:+1591885 MS.gene82880:CDS
TATGTCTTTAGATTGGTCAC+CGG 0.628772 6.1:-1597373 None:intergenic
AAGTGGGTAACGATAATCCA+AGG 0.629175 6.1:+1592677 MS.gene82880:CDS
GTCACCGGTACGAAAGAGAA+GGG 0.632116 6.1:-1597358 None:intergenic
ATCGGAGAAAGAGACGGTGG+CGG 0.632706 6.1:-1592611 None:intergenic
TTTATGGCCCTCCAGGAACA+GGG 0.634037 6.1:+1596278 MS.gene82880:CDS
ACAGCTGAATCAAGGTCACC+AGG 0.637144 6.1:-1597420 None:intergenic
AAGGGAAATAGCGAAACTGA+TGG 0.642775 6.1:+1597662 MS.gene82880:CDS
CCTAGAATTTCCCTTGCCTG+GGG 0.646412 6.1:+1597464 MS.gene82880:CDS
GTTACAGCCTGTGATCCGAG+TGG 0.647718 6.1:-1596995 None:intergenic
GTGAAGCTACGAAGACGACA+TGG 0.648528 6.1:+1591879 MS.gene82880:CDS
CTGAATCAAGGTCACCAGGA+CGG 0.653067 6.1:-1597416 None:intergenic
GGCGCCATCGGAGAAAGAGA+CGG 0.665134 6.1:-1592617 None:intergenic
TGTAGCAGACCGTATTGATG+AGG 0.665500 6.1:+1597440 MS.gene82880:CDS
TGGGCCAAGAAGTCCAATAG+GGG 0.667815 6.1:+1597040 MS.gene82880:CDS
GATTATGCATTGATGACTGG+AGG 0.668224 6.1:+1596962 MS.gene82880:CDS
TCCAGGAACAGGGAAGACAA+TGG 0.668408 6.1:+1596288 MS.gene82880:CDS
CCAGGGGTATTTCCCTCTGG+AGG 0.673340 6.1:-1596071 None:intergenic
TGATCCGAGAGTCCTCCAGA+GGG 0.678628 6.1:+1596059 MS.gene82880:CDS
TTGATCCGAGAGTCCTCCAG+AGG 0.688066 6.1:+1596058 MS.gene82880:CDS
GAGAAAACGTGCCAGACCAG+GGG 0.697208 6.1:-1596087 None:intergenic
GCCATCGGAGAAAGAGACGG+TGG 0.704426 6.1:-1592614 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATATTAAATATAAAA+TGG + chr6.1:1596792-1596811 MS.gene82880:intron 0.0%
!!! TTTTTTTATATATATATTTT+CGG + chr6.1:1594076-1594095 MS.gene82880:intron 0.0%
!! TACAATAATAAAAATTTGAT+AGG - chr6.1:1594526-1594545 None:intergenic 10.0%
!!! CTCTTTATTTTTTTTTTTTT+GGG - chr6.1:1592028-1592047 None:intergenic 10.0%
!!! TATGTTTAATATTTTATTTG+TGG + chr6.1:1592914-1592933 MS.gene82880:intron 10.0%
!! ATAATAATATATGAAAAGCA+TGG - chr6.1:1597129-1597148 None:intergenic 15.0%
!! ATTAAACTAATAGAACATTA+TGG - chr6.1:1594624-1594643 None:intergenic 15.0%
!! CCAAAAAAAAAAAAATAAAG+AGG + chr6.1:1592026-1592045 MS.gene82880:intron 15.0%
!! TAATAACATGCAAATTTATT+TGG - chr6.1:1593609-1593628 None:intergenic 15.0%
!! TATAAAAAATCTGAAAAATG+AGG - chr6.1:1596528-1596547 None:intergenic 15.0%
!!! AAAATATCATTTTATCTAGA+AGG - chr6.1:1596905-1596924 None:intergenic 15.0%
!!! AACATGAAACATATTTTTTT+TGG - chr6.1:1596397-1596416 None:intergenic 15.0%
!!! CATCTTTTTTTTTTTTTGAA+TGG + chr6.1:1596760-1596779 MS.gene82880:intron 15.0%
!!! CCTCTTTATTTTTTTTTTTT+TGG - chr6.1:1592029-1592048 None:intergenic 15.0%
!!! CTTTTGATAAAAAAAAAGTA+GGG - chr6.1:1592279-1592298 None:intergenic 15.0%
!!! TTGTTTTCAATTTAAATTCA+GGG + chr6.1:1596935-1596954 MS.gene82880:intron 15.0%
!!! TTTGTTTTCAATTTAAATTC+AGG + chr6.1:1596934-1596953 MS.gene82880:intron 15.0%
!!! TTTTGATAAAAAAAAAGTAG+GGG - chr6.1:1592278-1592297 None:intergenic 15.0%
!!! TTTTGTTTTTGTTTTTTTGA+AGG + chr6.1:1592938-1592957 MS.gene82880:intron 15.0%
!! AAAAAAATGATGAGCAAATA+AGG - chr6.1:1596868-1596887 None:intergenic 20.0%
!! ATATTCCTCTTTATAATTTC+TGG + chr6.1:1596547-1596566 MS.gene82880:intron 20.0%
!! ATTCATTATTATACACATGT+TGG + chr6.1:1593675-1593694 MS.gene82880:intron 20.0%
!! ATTGAATTTAGAAAGACAAT+TGG - chr6.1:1596650-1596669 None:intergenic 20.0%
!! TAAAAAATTTACCTCCAATA+TGG - chr6.1:1595321-1595340 None:intergenic 20.0%
!! TATAAATTGTCCATAAAGTT+TGG + chr6.1:1595779-1595798 MS.gene82880:intron 20.0%
!! TCATATATTATTATCCAACT+CGG + chr6.1:1597135-1597154 MS.gene82880:intron 20.0%
!! TTCATTATTATACACATGTT+GGG + chr6.1:1593676-1593695 MS.gene82880:intron 20.0%
!! TTGTTTCATATAAGATGATA+GGG - chr6.1:1592098-1592117 None:intergenic 20.0%
!! TTTGTTTCATATAAGATGAT+AGG - chr6.1:1592099-1592118 None:intergenic 20.0%
!!! AGTTGTATATTCTCTAAAAA+TGG - chr6.1:1595871-1595890 None:intergenic 20.0%
!!! ATAATTGAGTTTTCAGATTT+GGG - chr6.1:1595658-1595677 None:intergenic 20.0%
!!! ATTAAACCTTTTGAAACTTT+GGG + chr6.1:1594941-1594960 MS.gene82880:intron 20.0%
!!! CCTACTTTTTTTTTATCAAA+AGG + chr6.1:1592277-1592296 MS.gene82880:intron 20.0%
!!! CCTTTTGATAAAAAAAAAGT+AGG - chr6.1:1592280-1592299 None:intergenic 20.0%
!!! CTATTTTCTCAAATTATCAA+AGG - chr6.1:1593869-1593888 None:intergenic 20.0%
!!! GTTGTATATTCTCTAAAAAT+GGG - chr6.1:1595870-1595889 None:intergenic 20.0%
!!! TATATTTTCAGACAATGAAA+TGG - chr6.1:1593994-1594013 None:intergenic 20.0%
!!! TCTAAAATCATCTTTCTTAA+AGG + chr6.1:1596607-1596626 MS.gene82880:intron 20.0%
!!! TTGTATATTCTCTAAAAATG+GGG - chr6.1:1595869-1595888 None:intergenic 20.0%
! AAAAGTAATGAAATTGCATC+AGG - chr6.1:1597193-1597212 None:intergenic 25.0%
! AAAGTCAGAGTTTGAAAATA+CGG - chr6.1:1594326-1594345 None:intergenic 25.0%
! AACAATAATGACAATGTTTC+AGG + chr6.1:1594480-1594499 MS.gene82880:intron 25.0%
! AATAGTTCATCATGAATGAA+TGG + chr6.1:1594129-1594148 MS.gene82880:intron 25.0%
! AATTGGAACAAGAAGATAAA+TGG - chr6.1:1596358-1596377 None:intergenic 25.0%
! ACAATAATGACAATGTTTCA+GGG + chr6.1:1594481-1594500 MS.gene82880:intron 25.0%
! AGAAATAGTCTGATAAATAG+AGG - chr6.1:1595906-1595925 None:intergenic 25.0%
! ATCAATTACTAACAACTTCA+AGG + chr6.1:1594414-1594433 MS.gene82880:intron 25.0%
! ATTGAATAGCACGATTAAAA+CGG + chr6.1:1591931-1591950 MS.gene82880:intron 25.0%
! CACATATCTTCAATTGTTTA+AGG - chr6.1:1594721-1594740 None:intergenic 25.0%
! CATAATATATAGTTCGTATC+TGG - chr6.1:1595344-1595363 None:intergenic 25.0%
! GAAATAGTCTGATAAATAGA+GGG - chr6.1:1595905-1595924 None:intergenic 25.0%
! GACATTGAAAAACATCAAAT+TGG - chr6.1:1596375-1596394 None:intergenic 25.0%
! GATGATAGACTAACTTATAA+AGG - chr6.1:1592252-1592271 None:intergenic 25.0%
! GCATCAACAAAGAATAAAAT+TGG + chr6.1:1597773-1597792 MS.gene82880:CDS 25.0%
! TAAAAATTTGATAGGCAGTA+TGG - chr6.1:1594518-1594537 None:intergenic 25.0%
! TGAAAACACAAAATTACATC+AGG + chr6.1:1596234-1596253 MS.gene82880:CDS 25.0%
! TGATCACTTCTACTTAATAT+AGG - chr6.1:1596485-1596504 None:intergenic 25.0%
! TGATTAAATGTAACATCTGT+TGG + chr6.1:1593892-1593911 MS.gene82880:intron 25.0%
! TGTTTCATATAAGATGATAG+GGG - chr6.1:1592097-1592116 None:intergenic 25.0%
! TTCAATTTAAATTCAGGGAT+TGG + chr6.1:1596940-1596959 MS.gene82880:intron 25.0%
!! AAAACTCAATTATCTTTTGC+AGG + chr6.1:1595665-1595684 MS.gene82880:intron 25.0%
!! AAACTCAATTATCTTTTGCA+GGG + chr6.1:1595666-1595685 MS.gene82880:intron 25.0%
!! AATATATGAAAAGCATGGAA+TGG - chr6.1:1597124-1597143 None:intergenic 25.0%
!! ATCTGTTTCAAATAATGGAA+AGG + chr6.1:1596147-1596166 MS.gene82880:CDS 25.0%
!! ATTCTCACATTTTTATTGTC+AGG + chr6.1:1594997-1595016 MS.gene82880:intron 25.0%
!! CGTTTGAATTTTATCCAATT+GGG + chr6.1:1594214-1594233 MS.gene82880:intron 25.0%
!! CTTTAATCTCTATCTTTTGT+GGG - chr6.1:1597587-1597606 None:intergenic 25.0%
!! GATAATTGAGTTTTCAGATT+TGG - chr6.1:1595659-1595678 None:intergenic 25.0%
!! GGATATGTTGATAGAATATT+GGG + chr6.1:1596025-1596044 MS.gene82880:CDS 25.0%
!! GTGAAGCATTATATCTTAAT+TGG + chr6.1:1595575-1595594 MS.gene82880:intron 25.0%
!! GTTTGAATTTTATCCAATTG+GGG + chr6.1:1594215-1594234 MS.gene82880:intron 25.0%
!! TAAAAAACCCATTTCGTTTT+CGG + chr6.1:1592476-1592495 MS.gene82880:intron 25.0%
!! TAATTGAGTTTTCAGATTTG+GGG - chr6.1:1595657-1595676 None:intergenic 25.0%
!! TATCATCTGAGTTCTAATTA+CGG - chr6.1:1593483-1593502 None:intergenic 25.0%
!! TATTTTCGGTATTAGATAGA+TGG + chr6.1:1594090-1594109 MS.gene82880:intron 25.0%
!! TCGTTTGAATTTTATCCAAT+TGG + chr6.1:1594213-1594232 MS.gene82880:intron 25.0%
!! TCTGACAACTTTCTTTTTAT+TGG + chr6.1:1593216-1593235 MS.gene82880:intron 25.0%
!! TCTGTTTCAAATAATGGAAA+GGG + chr6.1:1596148-1596167 MS.gene82880:CDS 25.0%
!! TTTTATTGCAAGTACAAGTT+TGG + chr6.1:1594695-1594714 MS.gene82880:intron 25.0%
!!! AACGAAATGGGTTTTTTATT+CGG - chr6.1:1592474-1592493 None:intergenic 25.0%
!!! ACAATTTTACAGCCATTTTT+CGG - chr6.1:1593298-1593317 None:intergenic 25.0%
!!! ACTCAATCAATATTTTTGCT+TGG + chr6.1:1595605-1595624 MS.gene82880:intron 25.0%
!!! CATTAAACCTTTTGAAACTT+TGG + chr6.1:1594940-1594959 MS.gene82880:intron 25.0%
!!! TATTTTGTGTTTTGGTTTTC+CGG + chr6.1:1594776-1594795 MS.gene82880:intron 25.0%
!!! TTTTAATCGTGCTATTCAAT+TGG - chr6.1:1591931-1591950 None:intergenic 25.0%
AAAATGAGTACCATAGAGTA+AGG + chr6.1:1595023-1595042 MS.gene82880:CDS 30.0%
AAGAAAACCAATTGATAAGC+CGG - chr6.1:1594798-1594817 None:intergenic 30.0%
AATACTACCTTTGACCATAT+TGG + chr6.1:1595304-1595323 MS.gene82880:CDS 30.0%
ACTCAGATGATAAAAGATTG+CGG + chr6.1:1593491-1593510 MS.gene82880:intron 30.0%
ACTGACAACATAAGAATTTC+TGG - chr6.1:1593070-1593089 None:intergenic 30.0%
AGACAGTAATGTCCTAATTA+TGG - chr6.1:1594258-1594277 None:intergenic 30.0%
ATATGACGAAGAAAAAAAGC+TGG + chr6.1:1594840-1594859 MS.gene82880:CDS 30.0%
ATTCAGATTGTACCTAATGT+AGG + chr6.1:1595981-1596000 MS.gene82880:intron 30.0%
ATTGAGCGATGATATCATAA+AGG + chr6.1:1597608-1597627 MS.gene82880:CDS 30.0%
CAAAAACCCAAAGTTTCAAA+AGG - chr6.1:1594950-1594969 None:intergenic 30.0%
CAATAATGACAATGTTTCAG+GGG + chr6.1:1594482-1594501 MS.gene82880:intron 30.0%
CATTCATGATGAACTATTCA+AGG - chr6.1:1594127-1594146 None:intergenic 30.0%
CCACAAAAGATAGAGATTAA+AGG + chr6.1:1597585-1597604 MS.gene82880:CDS 30.0%
CCAGAATCTGTTTCAAATAA+TGG + chr6.1:1596142-1596161 MS.gene82880:CDS 30.0%
CCTTATAATCTACAACTTCA+CGG - chr6.1:1597746-1597765 None:intergenic 30.0%
CTTATTACGATCTGTTAGAA+TGG - chr6.1:1595702-1595721 None:intergenic 30.0%
CTTGTTGGAAAAGTGAAATT+CGG + chr6.1:1592434-1592453 MS.gene82880:intron 30.0%
GACAGTAATGTCCTAATTAT+GGG - chr6.1:1594257-1594276 None:intergenic 30.0%
GAGACATTTAATATGATCAG+GGG + chr6.1:1593513-1593532 MS.gene82880:intron 30.0%
GGAGACATTTAATATGATCA+GGG + chr6.1:1593512-1593531 MS.gene82880:intron 30.0%
GTGATTTAGATCGAGAAAAA+TGG + chr6.1:1595269-1595288 MS.gene82880:CDS 30.0%
TAAGTGTAATCGCATGTTAT+CGG + chr6.1:1593455-1593474 MS.gene82880:intron 30.0%
TAATTAGGACATTACTGTCT+AGG + chr6.1:1594258-1594277 MS.gene82880:intron 30.0%
TCAATTCTCTTACTAAGAGA+AGG - chr6.1:1596196-1596215 None:intergenic 30.0%
TCTAACAGATCGTAATAAGT+TGG + chr6.1:1595703-1595722 MS.gene82880:CDS 30.0%
TGAGAATTGTCTGAGTAAAT+TGG + chr6.1:1597275-1597294 MS.gene82880:intron 30.0%
TGAGATATTGAAGAAACAAG+AGG + chr6.1:1592965-1592984 MS.gene82880:CDS 30.0%
TGCTTCATCATATGCTAAAA+AGG + chr6.1:1592765-1592784 MS.gene82880:CDS 30.0%
TTCAGATTGTACCTAATGTA+GGG + chr6.1:1595982-1596001 MS.gene82880:intron 30.0%
TTGTTGGAAAAGTGAAATTC+GGG + chr6.1:1592435-1592454 MS.gene82880:intron 30.0%
TTTACATGAGTCTGTATCAT+GGG + chr6.1:1594163-1594182 MS.gene82880:intron 30.0%
! AACTCAATTATCTTTTGCAG+GGG + chr6.1:1595667-1595686 MS.gene82880:intron 30.0%
! AGCATTTTTGTATGCGAAAT+AGG + chr6.1:1593154-1593173 MS.gene82880:intron 30.0%
! ATCATCTGAGTTCTAATTAC+GGG - chr6.1:1593482-1593501 None:intergenic 30.0%
! CCATTATTTGAAACAGATTC+TGG - chr6.1:1596145-1596164 None:intergenic 30.0%
! CCTTTAATCTCTATCTTTTG+TGG - chr6.1:1597588-1597607 None:intergenic 30.0%
! GGGATATGTTGATAGAATAT+TGG + chr6.1:1596024-1596043 MS.gene82880:CDS 30.0%
! GTAAATTGGATGAATTTTGC+AGG + chr6.1:1597289-1597308 MS.gene82880:intron 30.0%
! TAAAAAAGCACGTTTCTGAA+TGG - chr6.1:1596262-1596281 None:intergenic 30.0%
! TAATCGAATGAAAGCACAAT+TGG + chr6.1:1593028-1593047 MS.gene82880:CDS 30.0%
! TCAGCATAATTGTAGTTTGT+TGG + chr6.1:1595504-1595523 MS.gene82880:intron 30.0%
! TCTGTGTGTATTTTGTGTTT+TGG + chr6.1:1594768-1594787 MS.gene82880:intron 30.0%
!! AATCAATATTTTTGCTTGGC+TGG + chr6.1:1595609-1595628 MS.gene82880:intron 30.0%
!! ATCAATATTTTTGCTTGGCT+GGG + chr6.1:1595610-1595629 MS.gene82880:intron 30.0%
!! CATCGTGAATTCGTTTTTAA+AGG - chr6.1:1595426-1595445 None:intergenic 30.0%
!! TCAAATAATGGAAAGGGTTT+TGG + chr6.1:1596154-1596173 MS.gene82880:CDS 30.0%
!! TGCAACTTTTACTCACTTTT+TGG - chr6.1:1597232-1597251 None:intergenic 30.0%
!!! TATGTAGTTTTGTAGCTTGA+AGG + chr6.1:1593776-1593795 MS.gene82880:intron 30.0%
!!! TTCAGAAACGTGCTTTTTTA+TGG + chr6.1:1596262-1596281 MS.gene82880:CDS 30.0%
!!! TTGGGAATTACATCGATTTT+GGG + chr6.1:1591839-1591858 MS.gene82880:CDS 30.0%
AAAAAGCAGTAAACCCCTAT+TGG - chr6.1:1597056-1597075 None:intergenic 35.0%
AAAGCAAACTATAGAGGAGA+AGG + chr6.1:1595135-1595154 MS.gene82880:CDS 35.0%
AATGTTCAGGATACACTTCA+AGG - chr6.1:1596842-1596861 None:intergenic 35.0%
ACACAAAATACACACAGAAC+AGG - chr6.1:1594766-1594785 None:intergenic 35.0%
ACTACGAAAGCAAACTATAG+AGG + chr6.1:1595129-1595148 MS.gene82880:CDS 35.0%
AGAAGATTCATCAATCAGAC+TGG + chr6.1:1595069-1595088 MS.gene82880:CDS 35.0%
AGAGACAGTTATCCGAAAAA+TGG + chr6.1:1593283-1593302 MS.gene82880:intron 35.0%
AGATACACGAGTTGTTTGAT+TGG + chr6.1:1597020-1597039 MS.gene82880:CDS 35.0%
AGTTTCTCAGATTATAACCG+AGG - chr6.1:1592823-1592842 None:intergenic 35.0%
ATCTCAGATGGCTAAATATG+AGG + chr6.1:1594885-1594904 MS.gene82880:CDS 35.0%
ATTATGGCGTAATTTGATCC+AGG - chr6.1:1594608-1594627 None:intergenic 35.0%
ATTTGATAGGCAGTATGGAA+AGG - chr6.1:1594513-1594532 None:intergenic 35.0%
CAAGGACTATGTCTTTAGAT+TGG - chr6.1:1597383-1597402 None:intergenic 35.0%
CACAAAAACCTCTTCTTCAA+TGG + chr6.1:1592540-1592559 MS.gene82880:intron 35.0%
CATAAGTAGAACTCAAGAGA+TGG + chr6.1:1593331-1593350 MS.gene82880:intron 35.0%
CCGTGAAGTTGTAGATTATA+AGG + chr6.1:1597743-1597762 MS.gene82880:CDS 35.0%
CGGAGACATTTAATATGATC+AGG + chr6.1:1593511-1593530 MS.gene82880:intron 35.0%
CGTAAGTAGAACTCAAATTG+CGG + chr6.1:1593092-1593111 MS.gene82880:intron 35.0%
CTTTACATGAGTCTGTATCA+TGG + chr6.1:1594162-1594181 MS.gene82880:intron 35.0%
GATACACGAGTTGTTTGATT+GGG + chr6.1:1597021-1597040 MS.gene82880:CDS 35.0%
GCAAATAAGGTCAAATGTTC+AGG - chr6.1:1596855-1596874 None:intergenic 35.0%
GTAGAGACAATTGATATGCT+GGG + chr6.1:1593363-1593382 MS.gene82880:intron 35.0%
GTAGCTCATTCCAAACTTTA+TGG - chr6.1:1595792-1595811 None:intergenic 35.0%
GTCAACGTGTCAAATAAGTA+GGG + chr6.1:1596431-1596450 MS.gene82880:intron 35.0%
GTCAGCCAGAAATTATAAAG+AGG - chr6.1:1596555-1596574 None:intergenic 35.0%
GTGTCAAATAAGTAGGGAAT+TGG + chr6.1:1596437-1596456 MS.gene82880:intron 35.0%
GTGTTTCATCTCCCATAATT+AGG + chr6.1:1594243-1594262 MS.gene82880:intron 35.0%
TCAGAGTTTGAAAATACGGT+CGG - chr6.1:1594322-1594341 None:intergenic 35.0%
TGAAGAAACAAGAGGAAACA+AGG + chr6.1:1592973-1592992 MS.gene82880:CDS 35.0%
TGAGAATAAACCGGATAAAG+TGG - chr6.1:1592572-1592591 None:intergenic 35.0%
TGTAGAGACAATTGATATGC+TGG + chr6.1:1593362-1593381 MS.gene82880:intron 35.0%
TGTCAACGTGTCAAATAAGT+AGG + chr6.1:1596430-1596449 MS.gene82880:intron 35.0%
TGTGAAGAATGGTGAAGAAA+AGG - chr6.1:1592524-1592543 None:intergenic 35.0%
TTACATGAGTCTGTATCATG+GGG + chr6.1:1594164-1594183 MS.gene82880:intron 35.0%
TTCAAGGAGATTTCTCTTGT+AGG - chr6.1:1596826-1596845 None:intergenic 35.0%
TTTACCTCCAATATGGTCAA+AGG - chr6.1:1595314-1595333 None:intergenic 35.0%
TTTCTTGGCAGGAAAAACAA+AGG + chr6.1:1594812-1594831 MS.gene82880:intron 35.0%
TTTGACACGTTGACAAAACA+AGG - chr6.1:1596425-1596444 None:intergenic 35.0%
TTTGAGTGTCCAAAACATGT+CGG - chr6.1:1593815-1593834 None:intergenic 35.0%
! AATTGGATGAATTTTGCAGG+CGG + chr6.1:1597292-1597311 MS.gene82880:intron 35.0%
! ACTCAATTATCTTTTGCAGG+GGG + chr6.1:1595668-1595687 MS.gene82880:intron 35.0%
! ATCAAAGGTGTATGCATTTC+TGG - chr6.1:1593854-1593873 None:intergenic 35.0%
! CAATGCAAGTTCTTTTTCTG+TGG + chr6.1:1596666-1596685 MS.gene82880:intron 35.0%
! CGAATTCACGATGATTTTTG+TGG + chr6.1:1595433-1595452 MS.gene82880:intron 35.0%
! CTTGCAATTTTACAAGCTCT+TGG - chr6.1:1595051-1595070 None:intergenic 35.0%
! GAAGAATCTAGCTAACTTGT+TGG + chr6.1:1592419-1592438 MS.gene82880:intron 35.0%
! GAAGAGGTTTTTGTGAAGAA+TGG - chr6.1:1592535-1592554 None:intergenic 35.0%
! GCAGTTATTAGCTTACAAGT+GGG + chr6.1:1596695-1596714 MS.gene82880:intron 35.0%
! TATGTCTTTAGATTGGTCAC+CGG - chr6.1:1597376-1597395 None:intergenic 35.0%
! TCAAAGGTGTATGCATTTCT+GGG - chr6.1:1593853-1593872 None:intergenic 35.0%
! TGCAGTTATTAGCTTACAAG+TGG + chr6.1:1596694-1596713 MS.gene82880:intron 35.0%
! TTGGATTATGCATTGATGAC+TGG + chr6.1:1596959-1596978 MS.gene82880:CDS 35.0%
!! AATAAGTTGGTCGTAACAGT+TGG + chr6.1:1595716-1595735 MS.gene82880:CDS 35.0%
!! ATTCTAGGACCTCATCAATA+CGG - chr6.1:1597452-1597471 None:intergenic 35.0%
!! ATTTTGTTTGTGCCTGATGT+TGG - chr6.1:1594867-1594886 None:intergenic 35.0%
!! TTGGGTTGAAATCAGGTTAA+GGG + chr6.1:1591857-1591876 MS.gene82880:CDS 35.0%
!! TTTGGGTTGAAATCAGGTTA+AGG + chr6.1:1591856-1591875 MS.gene82880:CDS 35.0%
!! TTTTGTTTGTGCCTGATGTT+GGG - chr6.1:1594866-1594885 None:intergenic 35.0%
!!! ATCGATTTTGGGTTGAAATC+AGG + chr6.1:1591850-1591869 MS.gene82880:CDS 35.0%
!!! GCTTTAAGACCTTTTTCAAG+AGG - chr6.1:1592730-1592749 None:intergenic 35.0%
!!! GGCTTATCAATTGGTTTTCT+TGG + chr6.1:1594797-1594816 MS.gene82880:intron 35.0%
!!! GGTTGAGTGTTATTTTTGCA+TGG + chr6.1:1595839-1595858 MS.gene82880:intron 35.0%
!!! GTTGGGAATTACATCGATTT+TGG + chr6.1:1591838-1591857 MS.gene82880:CDS 35.0%
!!! TATCAATTGGTTTTCTTGGC+AGG + chr6.1:1594801-1594820 MS.gene82880:intron 35.0%
AACAGAAGACTAACTCTAGC+TGG + chr6.1:1594447-1594466 MS.gene82880:intron 40.0%
AACAGCAATAACCAGAAGCA+TGG - chr6.1:1596730-1596749 None:intergenic 40.0%
AAGGGAAATAGCGAAACTGA+TGG + chr6.1:1597662-1597681 MS.gene82880:CDS 40.0%
AAGTGGGTAACGATAATCCA+AGG + chr6.1:1592677-1592696 MS.gene82880:CDS 40.0%
ACAGCACTTGCAAAAGCAAA+AGG + chr6.1:1595187-1595206 MS.gene82880:CDS 40.0%
ACCCACTTTCGAAGATGAAT+CGG - chr6.1:1592665-1592684 None:intergenic 40.0%
ACTACCTTTGACCATATTGG+AGG + chr6.1:1595307-1595326 MS.gene82880:CDS 40.0%
AGGAGAAACCAACTTGAGAA+GGG + chr6.1:1595247-1595266 MS.gene82880:CDS 40.0%
ATGGCGAAAACCACTTTATC+CGG + chr6.1:1592559-1592578 MS.gene82880:intron 40.0%
ATGGTGAAGAAAAGGTTCTG+AGG - chr6.1:1592516-1592535 None:intergenic 40.0%
ATTATCCAACTCGGTTCTTG+TGG + chr6.1:1597144-1597163 MS.gene82880:intron 40.0%
CAAGCTGGATCAAGAAAATC+TGG + chr6.1:1597537-1597556 MS.gene82880:CDS 40.0%
CAGAGAAGATAGAGTTTGAG+AGG + chr6.1:1593748-1593767 MS.gene82880:intron 40.0%
CAGAGTTTGAAAATACGGTC+GGG - chr6.1:1594321-1594340 None:intergenic 40.0%
CAGCACTTGCAAAAGCAAAA+GGG + chr6.1:1595188-1595207 MS.gene82880:CDS 40.0%
CATTTGATATGTCGAGGCAA+AGG + chr6.1:1593118-1593137 MS.gene82880:intron 40.0%
CGAAAAACGAAGAGATTGAC+AGG + chr6.1:1595227-1595246 MS.gene82880:CDS 40.0%
CTAAATCACCCTTCTCAAGT+TGG - chr6.1:1595258-1595277 None:intergenic 40.0%
CTACTATAAACGAGGAAGGA+GGG + chr6.1:1595808-1595827 MS.gene82880:intron 40.0%
CTTGAGCTATGTACTTGTCT+AGG - chr6.1:1597521-1597540 None:intergenic 40.0%
GATCCTGAACCTCTTGAAAA+AGG + chr6.1:1592718-1592737 MS.gene82880:CDS 40.0%
GATTGTACCTAATGTAGGGA+AGG + chr6.1:1595986-1596005 MS.gene82880:intron 40.0%
GGAATGAGCTACTATAAACG+AGG + chr6.1:1595800-1595819 MS.gene82880:intron 40.0%
GGCACAAACAAAATCTCAGA+TGG + chr6.1:1594873-1594892 MS.gene82880:CDS 40.0%
GGCTAAATATGAGGATGAGT+TGG + chr6.1:1594894-1594913 MS.gene82880:CDS 40.0%
GGTTAAGGCTGAGAATAAAC+CGG - chr6.1:1592581-1592600 None:intergenic 40.0%
TAAACCCCTATTGGACTTCT+TGG - chr6.1:1597047-1597066 None:intergenic 40.0%
TAGGGTTCCGAAAACGAAAT+GGG - chr6.1:1592486-1592505 None:intergenic 40.0%
TAGTAAGAGAATTGAGCAGC+TGG + chr6.1:1596201-1596220 MS.gene82880:CDS 40.0%
TCCAGAAGATGAAGAAGGAA+TGG - chr6.1:1592641-1592660 None:intergenic 40.0%
TCCAGGGTTTGAAGGAATTA+AGG - chr6.1:1594354-1594373 None:intergenic 40.0%
TCCTTAATTCCTTCAAACCC+TGG + chr6.1:1594350-1594369 MS.gene82880:intron 40.0%
TGAAACACATACACCCCAAT+TGG - chr6.1:1594231-1594250 None:intergenic 40.0%
TGAGCTACTATAAACGAGGA+AGG + chr6.1:1595804-1595823 MS.gene82880:intron 40.0%
TGTAGCTTGAAGGTTTGTGT+GGG + chr6.1:1593786-1593805 MS.gene82880:intron 40.0%
TTAGTAGTGTGCGTGAGTTT+CGG + chr6.1:1593559-1593578 MS.gene82880:intron 40.0%
TTGTAGCTTGAAGGTTTGTG+TGG + chr6.1:1593785-1593804 MS.gene82880:intron 40.0%
! AACAACTTCAAGGTACTCGT+AGG + chr6.1:1594424-1594443 MS.gene82880:intron 40.0%
! AACCGATTCATCTTCGAAAG+TGG + chr6.1:1592660-1592679 MS.gene82880:CDS 40.0%
! AATATGAGGATGAGTTGGCA+AGG + chr6.1:1594899-1594918 MS.gene82880:CDS 40.0%
! ACCGATTCATCTTCGAAAGT+GGG + chr6.1:1592661-1592680 MS.gene82880:CDS 40.0%
! CAGAGAGTTGGCTTACAAAT+CGG + chr6.1:1596315-1596334 MS.gene82880:CDS 40.0%
! CTTCATATTGAAGGTGTGTC+TGG - chr6.1:1593944-1593963 None:intergenic 40.0%
! GAGTTTTCAGATTTGGGGAT+TGG - chr6.1:1595652-1595671 None:intergenic 40.0%
! GATTATGCATTGATGACTGG+AGG + chr6.1:1596962-1596981 MS.gene82880:CDS 40.0%
! GCATTGGCACTTCATATTGA+AGG - chr6.1:1593953-1593972 None:intergenic 40.0%
! TATGAAGCACTTACAGTCCA+GGG - chr6.1:1594370-1594389 None:intergenic 40.0%
! TGGTGAAGAAAAGGTTCTGA+GGG - chr6.1:1592515-1592534 None:intergenic 40.0%
! TGGTTTTCCGGCTTATCAAT+TGG + chr6.1:1594788-1594807 MS.gene82880:intron 40.0%
!! AATTTCTGGCTGACAGTCTA+AGG + chr6.1:1596561-1596580 MS.gene82880:intron 40.0%
!! GCTAAAACCGATGGATTTTC+CGG + chr6.1:1597639-1597658 MS.gene82880:CDS 40.0%
!! TGCTAAAAAGGTACTGACAC+CGG + chr6.1:1592777-1592796 MS.gene82880:intron 40.0%
!!! AAATCCATCGGTTTTAGCTG+CGG - chr6.1:1597637-1597656 None:intergenic 40.0%
!!! AGAAAAGGTTCTGAGGGTTT+TGG - chr6.1:1592509-1592528 None:intergenic 40.0%
!!! AGACCTTTTTCAAGAGGTTC+AGG - chr6.1:1592724-1592743 None:intergenic 40.0%
AAAAAAGCTGGCCCAACATC+AGG + chr6.1:1594852-1594871 MS.gene82880:CDS 45.0%
AATGCCCTTCTCTTTCGTAC+CGG + chr6.1:1597354-1597373 MS.gene82880:CDS 45.0%
ACACAGAACAGGAGCAAAGA+AGG - chr6.1:1594755-1594774 None:intergenic 45.0%
ACATGGTGAAGGTGATTGGA+AGG + chr6.1:1591896-1591915 MS.gene82880:intron 45.0%
ACTTACAGTCCAGGGTTTGA+AGG - chr6.1:1594362-1594381 None:intergenic 45.0%
AGACATGTCAGTGTTGTGTC+CGG - chr6.1:1592799-1592818 None:intergenic 45.0%
ATTGGGCCAAGAAGTCCAAT+AGG + chr6.1:1597038-1597057 MS.gene82880:CDS 45.0%
CAGGAGAAACCAACTTGAGA+AGG + chr6.1:1595246-1595265 MS.gene82880:CDS 45.0%
CGAGGAAGGAGGGAAAAAAT+TGG + chr6.1:1595818-1595837 MS.gene82880:intron 45.0%
CGATTTGTAAGCCAACTCTC+TGG - chr6.1:1596317-1596336 None:intergenic 45.0%
CGGAGACATTTGATATGTCG+AGG + chr6.1:1593112-1593131 MS.gene82880:intron 45.0%
CTGGACTGTAAGTGCTTCAT+AGG + chr6.1:1594369-1594388 MS.gene82880:intron 45.0%
GACAAGTACATAGCTCAAGC+TGG + chr6.1:1597522-1597541 MS.gene82880:CDS 45.0%
GCCATTCCTTCTTCATCTTC+TGG + chr6.1:1592637-1592656 MS.gene82880:CDS 45.0%
GCTACTATAAACGAGGAAGG+AGG + chr6.1:1595807-1595826 MS.gene82880:intron 45.0%
GCTCTTGGTTCCTTACTCTA+TGG - chr6.1:1595036-1595055 None:intergenic 45.0%
GGAAACAAGGCAAGCTGAAT+TGG + chr6.1:1592986-1593005 MS.gene82880:CDS 45.0%
GGTATTCAGTACCATGCTTC+TGG + chr6.1:1596716-1596735 MS.gene82880:intron 45.0%
GTAGGGTTCCGAAAACGAAA+TGG - chr6.1:1592487-1592506 None:intergenic 45.0%
TCCTAGAATTTCCCTTGCCT+GGG + chr6.1:1597463-1597482 MS.gene82880:CDS 45.0%
TCGGTTCCAGAAGATGAAGA+AGG - chr6.1:1592646-1592665 None:intergenic 45.0%
TGTCAGATGCAATGTGGCAT+TGG - chr6.1:1593969-1593988 None:intergenic 45.0%
TTCCCTTCCGGAAAATCCAT+CGG - chr6.1:1597649-1597668 None:intergenic 45.0%
TTGGGCCAAGAAGTCCAATA+GGG + chr6.1:1597039-1597058 MS.gene82880:CDS 45.0%
TTTCCTCAGCGTGTTGAAGA+CGG + chr6.1:1594032-1594051 MS.gene82880:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG + chr6.1:1594575-1594594 MS.gene82880:intron 45.0%
! AAGTTGGTCGTAACAGTTGG+TGG + chr6.1:1595719-1595738 MS.gene82880:CDS 45.0%
! ACAGTTGTCGCTTCCATACA+CGG - chr6.1:1597703-1597722 None:intergenic 45.0%
! AGGTGTATGCATTTCTGGGT+CGG - chr6.1:1593849-1593868 None:intergenic 45.0%
! ATACCTTGTTGTGTAGACCC+CGG - chr6.1:1595762-1595781 None:intergenic 45.0%
! ATGGAGTGTCAGATGCAATG+TGG - chr6.1:1593975-1593994 None:intergenic 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG + chr6.1:1594574-1594593 MS.gene82880:intron 45.0%
! CAGTTTCGCTATTTCCCTTC+CGG - chr6.1:1597661-1597680 None:intergenic 45.0%
! CTATGAAGCACTTACAGTCC+AGG - chr6.1:1594371-1594390 None:intergenic 45.0%
! GGTTTTCGCCATTGAAGAAG+AGG - chr6.1:1592551-1592570 None:intergenic 45.0%
! TGTAGCAGACCGTATTGATG+AGG + chr6.1:1597440-1597459 MS.gene82880:CDS 45.0%
! TTCAGATTTGGGGATTGGTG+TGG - chr6.1:1595647-1595666 None:intergenic 45.0%
!! AAACCGATGGATTTTCCGGA+AGG + chr6.1:1597643-1597662 MS.gene82880:CDS 45.0%
!! AACCGATGGATTTTCCGGAA+GGG + chr6.1:1597644-1597663 MS.gene82880:CDS 45.0%
!! AATCCAAGGAGTGCTTCTTC+TGG + chr6.1:1592691-1592710 MS.gene82880:CDS 45.0%
!! AATCCAGAAGAAGCACTCCT+TGG - chr6.1:1592697-1592716 None:intergenic 45.0%
!!! AAGGTTCTGAGGGTTTTGGT+AGG - chr6.1:1592505-1592524 None:intergenic 45.0%
!!! AGGTTCTGAGGGTTTTGGTA+GGG - chr6.1:1592504-1592523 None:intergenic 45.0%
!!! AATTTTTTCTAAAAATTATT+GGG - chr6.1:1592367-1592386 None:intergenic 5.0%
!!! ATAATTTTAATTTTTTAGTA+TGG - chr6.1:1592324-1592343 None:intergenic 5.0%
!!! TAATTTTTTCTAAAAATTAT+TGG - chr6.1:1592368-1592387 None:intergenic 5.0%
ACAGCTGAATCAAGGTCACC+AGG - chr6.1:1597423-1597442 None:intergenic 50.0%
ATTGTCTTCCCTGTTCCTGG+AGG - chr6.1:1596289-1596308 None:intergenic 50.0%
CAACACTGACATGTCTGCCT+CGG + chr6.1:1592803-1592822 MS.gene82880:intron 50.0%
CAACCCCACTTAGTGGGAAA+AGG - chr6.1:1594581-1594600 None:intergenic 50.0%
CCACTTAGTGGGAAAAGGCT+TGG - chr6.1:1594576-1594595 None:intergenic 50.0%
CCTAGAATTTCCCTTGCCTG+GGG + chr6.1:1597464-1597483 MS.gene82880:CDS 50.0%
CTAAAACCCTAGCAGAGGGT+GGG + chr6.1:1591983-1592002 MS.gene82880:intron 50.0%
CTACGAAGACGACATGGTGA+AGG + chr6.1:1591885-1591904 MS.gene82880:CDS 50.0%
CTCCCTAAAACCCTAGCAGA+GGG + chr6.1:1591979-1591998 MS.gene82880:intron 50.0%
CTGAATCAAGGTCACCAGGA+CGG - chr6.1:1597419-1597438 None:intergenic 50.0%
GACGACATGGTGAAGGTGAT+TGG + chr6.1:1591892-1591911 MS.gene82880:intron 50.0%
GAGGACTCTCGGATCAATGA+TGG - chr6.1:1596055-1596074 None:intergenic 50.0%
GCAAGCTGAATTGGCTGCTA+AGG + chr6.1:1592995-1593014 MS.gene82880:CDS 50.0%
GGTCTGCTACAGCTGAATCA+AGG - chr6.1:1597431-1597450 None:intergenic 50.0%
GTCACCGGTACGAAAGAGAA+GGG - chr6.1:1597361-1597380 None:intergenic 50.0%
GTCCTAGAATTTCCCTTGCC+TGG + chr6.1:1597462-1597481 MS.gene82880:CDS 50.0%
GTGAAGCTACGAAGACGACA+TGG + chr6.1:1591879-1591898 MS.gene82880:CDS 50.0%
TCCAGGAACAGGGAAGACAA+TGG + chr6.1:1596288-1596307 MS.gene82880:CDS 50.0%
TGAAGAAGGAATGGCGCCAT+CGG - chr6.1:1592632-1592651 None:intergenic 50.0%
TGATGCCACAAGAACCGAGT+TGG - chr6.1:1597152-1597171 None:intergenic 50.0%
TGGGCCAAGAAGTCCAATAG+GGG + chr6.1:1597040-1597059 MS.gene82880:CDS 50.0%
TGTCCGACAATGGCATGAGT+CGG - chr6.1:1593921-1593940 None:intergenic 50.0%
TGTCCGACTCATGCCATTGT+CGG + chr6.1:1593915-1593934 MS.gene82880:intron 50.0%
TTAAAACGCTCCTCTTCCCC+AGG - chr6.1:1597483-1597502 None:intergenic 50.0%
TTCCTCAGCGTGTTGAAGAC+GGG + chr6.1:1594033-1594052 MS.gene82880:intron 50.0%
TTGTCTTCCCTGTTCCTGGA+GGG - chr6.1:1596288-1596307 None:intergenic 50.0%
TTTATGGCCCTCCAGGAACA+GGG + chr6.1:1596278-1596297 MS.gene82880:CDS 50.0%
! AGGATGAGTTGGCAAGGAAG+AGG + chr6.1:1594905-1594924 MS.gene82880:CDS 50.0%
! ATTTCCCTCTGGAGGACTCT+CGG - chr6.1:1596066-1596085 None:intergenic 50.0%
! CACCCTCTGCTAGGGTTTTA+GGG - chr6.1:1591984-1592003 None:intergenic 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG + chr6.1:1594573-1594592 MS.gene82880:intron 50.0%
! CCTAATGTAGGGAAGGTGCA+CGG + chr6.1:1595993-1596012 MS.gene82880:intron 50.0%
! CTAATGTAGGGAAGGTGCAC+GGG + chr6.1:1595994-1596013 MS.gene82880:intron 50.0%
! CTTTTCCCACTAAGTGGGGT+TGG + chr6.1:1594579-1594598 MS.gene82880:intron 50.0%
! GAAGGTGCACGGGTTATTTG+GGG + chr6.1:1596004-1596023 MS.gene82880:CDS 50.0%
! GGAAGGTGCACGGGTTATTT+GGG + chr6.1:1596003-1596022 MS.gene82880:CDS 50.0%
! GGTGTATGCATTTCTGGGTC+GGG - chr6.1:1593848-1593867 None:intergenic 50.0%
! TGTGGGTGTCCGACATGTTT+TGG + chr6.1:1593803-1593822 MS.gene82880:intron 50.0%
! TTTTATGGCCCTCCAGGAAC+AGG + chr6.1:1596277-1596296 MS.gene82880:CDS 50.0%
!!! GCTAGGGTTTTAGGGAGCTA+TGG - chr6.1:1591976-1591995 None:intergenic 50.0%
!!! GTGCTTTTTTATGGCCCTCC+AGG + chr6.1:1596271-1596290 MS.gene82880:CDS 50.0%
AGAGGGAAATACCCCTGGTC+TGG + chr6.1:1596076-1596095 MS.gene82880:CDS 55.0%
AGGTAGCCAACCCCACTTAG+TGG - chr6.1:1594588-1594607 None:intergenic 55.0%
AGTGTCCAAGCTGCCGTGTA+TGG + chr6.1:1597687-1597706 MS.gene82880:CDS 55.0%
ATCGGAGAAAGAGACGGTGG+CGG - chr6.1:1592614-1592633 None:intergenic 55.0%
ATTTCCCTTGCCTGGGGAAG+AGG + chr6.1:1597470-1597489 MS.gene82880:CDS 55.0%
CACGGAACAAGCTTGCGTCA+AGG - chr6.1:1597728-1597747 None:intergenic 55.0%
CCCCAGGCAAGGGAAATTCT+AGG - chr6.1:1597467-1597486 None:intergenic 55.0%
CCGTGCACCTTCCCTACATT+AGG - chr6.1:1595996-1596015 None:intergenic 55.0%
CCTAAAACCCTAGCAGAGGG+TGG + chr6.1:1591982-1592001 MS.gene82880:intron 55.0%
CGAGAAAACGTGCCAGACCA+GGG - chr6.1:1596091-1596110 None:intergenic 55.0%
GAAGCCGCAGCTAAAACCGA+TGG + chr6.1:1597630-1597649 MS.gene82880:CDS 55.0%
GACAATGGCTGCCAGAGAGT+TGG + chr6.1:1596303-1596322 MS.gene82880:CDS 55.0%
GAGAAAACGTGCCAGACCAG+GGG - chr6.1:1596090-1596109 None:intergenic 55.0%
GCCATTGTCTTCCCTGTTCC+TGG - chr6.1:1596292-1596311 None:intergenic 55.0%
GCTCCCTAAAACCCTAGCAG+AGG + chr6.1:1591978-1591997 MS.gene82880:intron 55.0%
GGAGGAGATGTTGCTCCACT+CGG + chr6.1:1596980-1596999 MS.gene82880:CDS 55.0%
GGTAGCCAACCCCACTTAGT+GGG - chr6.1:1594587-1594606 None:intergenic 55.0%
GGTCACCGGTACGAAAGAGA+AGG - chr6.1:1597362-1597381 None:intergenic 55.0%
GTGTGTCTGGTGTCCGACAA+TGG - chr6.1:1593931-1593950 None:intergenic 55.0%
GTTACAGCCTGTGATCCGAG+TGG - chr6.1:1596998-1597017 None:intergenic 55.0%
GTTGGCAAGGAAGAGGATGC+AGG + chr6.1:1594912-1594931 MS.gene82880:CDS 55.0%
TCCTCAGCGTGTTGAAGACG+GGG + chr6.1:1594034-1594053 MS.gene82880:intron 55.0%
TCGAGAAAACGTGCCAGACC+AGG - chr6.1:1596092-1596111 None:intergenic 55.0%
TGATCCGAGAGTCCTCCAGA+GGG + chr6.1:1596059-1596078 MS.gene82880:CDS 55.0%
TGTGCGTGAGTTTCGGCCTT+CGG + chr6.1:1593566-1593585 MS.gene82880:intron 55.0%
TGTTGCTCCACTCGGATCAC+AGG + chr6.1:1596988-1597007 MS.gene82880:CDS 55.0%
TTCAAAGAGCCTAGCCCCGA+AGG - chr6.1:1593585-1593604 None:intergenic 55.0%
TTGATCCGAGAGTCCTCCAG+AGG + chr6.1:1596058-1596077 MS.gene82880:CDS 55.0%
! CCACCCTCTGCTAGGGTTTT+AGG - chr6.1:1591985-1592004 None:intergenic 55.0%
! GGGAAGGTGCACGGGTTATT+TGG + chr6.1:1596002-1596021 MS.gene82880:intron 55.0%
!! ACTAAGTGGGGTTGGCTACC+TGG + chr6.1:1594587-1594606 MS.gene82880:intron 55.0%
!! AGACCAGGGGTATTTCCCTC+TGG - chr6.1:1596077-1596096 None:intergenic 55.0%
!! AGTTGGTGGAGTGACTGCTC+TGG + chr6.1:1595733-1595752 MS.gene82880:CDS 55.0%
ACCAGGACGGTTCGTCGCAA+GGG - chr6.1:1597406-1597425 None:intergenic 60.0%
CAGCCGGGGTCTACACAACA+AGG + chr6.1:1595756-1595775 MS.gene82880:CDS 60.0%
CCTCCAGAGGGAAATACCCC+TGG + chr6.1:1596071-1596090 MS.gene82880:CDS 60.0%
CGCTTCCATACACGGCAGCT+TGG - chr6.1:1597695-1597714 None:intergenic 60.0%
GCCACCGTCTCTTTCTCCGA+TGG + chr6.1:1592613-1592632 MS.gene82880:CDS 60.0%
GCCATCGGAGAAAGAGACGG+TGG - chr6.1:1592617-1592636 None:intergenic 60.0%
GGCGCCATCGGAGAAAGAGA+CGG - chr6.1:1592620-1592639 None:intergenic 60.0%
GTGCGTGAGTTTCGGCCTTC+GGG + chr6.1:1593567-1593586 MS.gene82880:intron 60.0%
TGCGTGAGTTTCGGCCTTCG+GGG + chr6.1:1593568-1593587 MS.gene82880:intron 60.0%
!! CCAGGGGTATTTCCCTCTGG+AGG - chr6.1:1596074-1596093 None:intergenic 60.0%
ACCCTAGCAGAGGGTGGGAG+CGG + chr6.1:1591988-1592007 MS.gene82880:intron 65.0%
ACGCTCCTCTTCCCCAGGCA+AGG - chr6.1:1597478-1597497 None:intergenic 65.0%
AGTGACTGCTCTGGCAGCCG+GGG + chr6.1:1595742-1595761 MS.gene82880:CDS 65.0%
CACCAGGACGGTTCGTCGCA+AGG - chr6.1:1597407-1597426 None:intergenic 65.0%
CGCTCCTCTTCCCCAGGCAA+GGG - chr6.1:1597477-1597496 None:intergenic 65.0%
GACGGTTCGTCGCAAGGGCA+AGG - chr6.1:1597401-1597420 None:intergenic 65.0%
GAGTGACTGCTCTGGCAGCC+GGG + chr6.1:1595741-1595760 MS.gene82880:CDS 65.0%
GAGTTTCGGCCTTCGGGGCT+AGG + chr6.1:1593573-1593592 MS.gene82880:intron 65.0%
GCCCCGTCTTCAACACGCTG+AGG - chr6.1:1594038-1594057 None:intergenic 65.0%
GGAGTGACTGCTCTGGCAGC+CGG + chr6.1:1595740-1595759 MS.gene82880:CDS 65.0%
! GAAAGAGACGGTGGCGGTGG+TGG - chr6.1:1592608-1592627 None:intergenic 65.0%
! GGAGAAAGAGACGGTGGCGG+TGG - chr6.1:1592611-1592630 None:intergenic 65.0%
GCCCTTGCGACGAACCGTCC+TGG + chr6.1:1597402-1597421 MS.gene82880:CDS 70.0%
GCCGCTCCCACCCTCTGCTA+GGG - chr6.1:1591992-1592011 None:intergenic 70.0%
! AGAGACGGTGGCGGTGGTGG+CGG - chr6.1:1592605-1592624 None:intergenic 70.0%
CAGAGGGTGGGAGCGGCGCA+AGG + chr6.1:1591995-1592014 MS.gene82880:intron 75.0%
CGCCGCTCCCACCCTCTGCT+AGG - chr6.1:1591993-1592012 None:intergenic 75.0%
!! GGCGGTGGTGGCGGCGGTTA+AGG - chr6.1:1592596-1592615 None:intergenic 75.0%
!!! GACGGTGGCGGTGGTGGCGG+CGG - chr6.1:1592602-1592621 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 1591828 1597815 1591828 ID=MS.gene82880
chr6.1 mRNA 1591828 1597815 1591828 ID=MS.gene82880.t1;Parent=MS.gene82880
chr6.1 exon 1591828 1591906 1591828 ID=MS.gene82880.t1.exon1;Parent=MS.gene82880.t1
chr6.1 CDS 1591828 1591906 1591828 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1592593 1592786 1592593 ID=MS.gene82880.t1.exon2;Parent=MS.gene82880.t1
chr6.1 CDS 1592593 1592786 1592593 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1592960 1593055 1592960 ID=MS.gene82880.t1.exon3;Parent=MS.gene82880.t1
chr6.1 CDS 1592960 1593055 1592960 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1594823 1594933 1594823 ID=MS.gene82880.t1.exon4;Parent=MS.gene82880.t1
chr6.1 CDS 1594823 1594933 1594823 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1595019 1595328 1595019 ID=MS.gene82880.t1.exon5;Parent=MS.gene82880.t1
chr6.1 CDS 1595019 1595328 1595019 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1595687 1595777 1595687 ID=MS.gene82880.t1.exon6;Parent=MS.gene82880.t1
chr6.1 CDS 1595687 1595777 1595687 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1596003 1596336 1596003 ID=MS.gene82880.t1.exon7;Parent=MS.gene82880.t1
chr6.1 CDS 1596003 1596336 1596003 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1596956 1597104 1596956 ID=MS.gene82880.t1.exon8;Parent=MS.gene82880.t1
chr6.1 CDS 1596956 1597104 1596956 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
chr6.1 exon 1597311 1597815 1597311 ID=MS.gene82880.t1.exon9;Parent=MS.gene82880.t1
chr6.1 CDS 1597311 1597815 1597311 ID=cds.MS.gene82880.t1;Parent=MS.gene82880.t1
Gene Sequence

>MS.gene82880

ATGGAGGTGAGTTGGGAATTACATCGATTTTGGGTTGAAATCAGGTTAAGGGTGAAGCTACGAAGACGACATGGTGAAGGTGATTGGAAGGCAGAAAAAACCAATTGAATAGCACGATTAAAACGGATGAAGAGAACGCTATACACCATAGCTCCCTAAAACCCTAGCAGAGGGTGGGAGCGGCGCAAGGATTCAATCCCAAAAAAAAAAAAATAAAGAGGTTGAGATCGCTTAATAATAACTTATCATTTTTCTTTCAATTTTAACCCCTATCATCTTATATGAAACAAATTAAAATAATTAAACATACATCATTTTACATTTATAAGTCGATTTAACAACAAATTTGATCAAACATAATAAATTCAACGAGCTAGTTCATACACTATAAGCTAGCTTAAGCTATTAGCTAAAAACTCGTCCTTTATAAGTTAGTCTATCATCTATCCCCTACTTTTTTTTTATCAAAAGGAGTCATAAAATCACTCATAAGCCATACTAAAAAATTAAAATTATAACGAATTAAGCAGAGTCGACCCAATAATTTTTAGAAAAAATTAAATCTAATAGTAACTTGTTGAATAAAAAAGAGAAGAATCTAGCTAACTTGTTGGAAAAGTGAAATTCGGGTCAAATCAAAGCTCCGAATAAAAAACCCATTTCGTTTTCGGAACCCTACCAAAACCCTCAGAACCTTTTCTTCACCATTCTTCACAAAAACCTCTTCTTCAATGGCGAAAACCACTTTATCCGGTTTATTCTCAGCCTTAACCGCCGCCACCACCGCCACCGTCTCTTTCTCCGATGGCGCCATTCCTTCTTCATCTTCTGGAACCGATTCATCTTCGAAAGTGGGTAACGATAATCCAAGGAGTGCTTCTTCTGGATTCGATCCTGAACCTCTTGAAAAAGGTCTTAAAGCTCTCAAACAAATCTCTGCTTCATCATATGCTAAAAAGGTACTGACACCGGACACAACACTGACATGTCTGCCTCGGTTATAATCTGAGAAACTGACATAATTGAATGTAATCACATGTGTCAGTGTCTACGCAACTTCTATTCTATTCAATTATTCTTTTGCATTATGTTTAATATTTTATTTGTGGTTTTTGTTTTTGTTTTTTTGAAGGTGTTTGAGATATTGAAGAAACAAGAGGAAACAAGGCAAGCTGAATTGGCTGCTAAGGTTGCTGAGTTTAATCGAATGAAAGCACAATTGGAGACTGTAAGTTTTGTCCAGAAATTCTTATGTTGTCAGTTTCGTAAGTAGAACTCAAATTGCGGAGACATTTGATATGTCGAGGCAAAGGTTGTGTGTAAAATAGCATTTTTGTATGCGAAATAGGTTTTTTTTTGTCTGAGTAATGATACTTGTACAACTATTTTCTGACAACTTTCTTTTTATTGGTCGAAAACAATAGAGAGAGAGAGTAAGAACATGACGAGAGTATGAGAGACAGTTATCCGAAAAATGGCTGTAAAATTGTATGCTGTCAGCTTCATAAGTAGAACTCAAGAGATGGTAAATGATTGTAGAGACAATTGATATGCTGGGTTGCGAATTTAATGTTAACTTGCATTTTAGTAGTGTGTATAAGTTGAGCTGTTTGAAACGAGAATTTTTTAAGTGTAATCGCATGTTATCGGTCCCGTAATTAGAACTCAGATGATAAAAGATTGCGGAGACATTTAATATGATCAGGGGCAGATTTCATGTAAAATTGCATTTTAGTAGTGTGCGTGAGTTTCGGCCTTCGGGGCTAGGCTCTTTGAAACCAAATAAATTTGCATGTTATTACTTTTTTTTTAATTTGTTTTACATTATTAATTCTACACTATGTAGTATTCATTATTATACACATGTTGGGAATGTTTTTTTTAATCAAGTTTTTTTTTTTACAATGATGAAGTCTGTTTCAGAGAAGATAGAGTTTGAGAGGCAATCTATGTAGTTTTGTAGCTTGAAGGTTTGTGTGGGTGTCCGACATGTTTTGGACACTCAAACACTTGTACACCCGACCCAGAAATGCATACACCTTTGATAATTTGAGAAAATAGAATTGATTAAATGTAACATCTGTTGGTGTCCGACTCATGCCATTGTCGGACACCAGACACACCTTCAATATGAAGTGCCAATGCCACATTGCATCTGACACTCCATTTCATTGTCTGAAAATATATTATATTTTTTATTATTTTTTCCTCAGCGTGTTGAAGACGGGGCTAAAATTGATTTGATATTTTTTTTTATATATATATTTTCGGTATTAGATAGATGGAACGTGAAAGACCTTGAATAGTTCATCATGAATGAATGGTGTCTCAGTACTTTACATGAGTCTGTATCATGGGGAAAATGTAATAATTCTTGACAAATTCTCGTTTGAATTTTATCCAATTGGGGTGTATGTGTTTCATCTCCCATAATTAGGACATTACTGTCTAGGATTTCTGTGTAAGTTTTTTTTTGTTATTGACAAATGTCCCGACCGTATTTTCAAACTCTGACTTTTAACTCCTTAATTCCTTCAAACCCTGGACTGTAAGTGCTTCATAGGAGACGAGAGTTTTTTTGTTTGTATCAATTACTAACAACTTCAAGGTACTCGTAGGAACAGAAGACTAACTCTAGCTGGAAGACTCTAGAACAATAATGACAATGTTTCAGGGGTTACACCTTTCCATACTGCCTATCAAATTTTTATTATTGTAAGTTGAAATTGTCTACAACAACAACAACCAAGCCTTTTCCCACTAAGTGGGGTTGGCTACCTGGATCAAATTACGCCATAATGTTCTATTAGTTTAATAAATCATATGCATTGTTGTGCAAGTTCTAGCTTCATGATGAAATGAGTTTATTTTATTGCAAGTACAAGTTTGGCCTTAAACAATTGAAGATATGTGTGAAAGTGAAACCTTCTTTGCTCCTGTTCTGTGTGTATTTTGTGTTTTGGTTTTCCGGCTTATCAATTGGTTTTCTTGGCAGGAAAAACAAAGGATTGTATATGACGAAGAAAAAAAGCTGGCCCAACATCAGGCACAAACAAAATCTCAGATGGCTAAATATGAGGATGAGTTGGCAAGGAAGAGGATGCAGGTATTACATTAAACCTTTTGAAACTTTGGGTTTTTGTTTTTGTCAATTTTCAAGTCTTTTCTGATTCTCACATTTTTATTGTCAGGCAGAAAATGAGTACCATAGAGTAAGGAACCAAGAGCTTGTAAAATTGCAAGAAGATTCATCAATCAGACTGGAGCAAACTAGACTTGAAACAGAAAAACACATTCAAGCACTACGAAAGCAAACTATAGAGGAGAAGGCTAAGCTTGAACATGACACAATCAGAGAAACAGCACTTGCAAAAGCAAAAGGGAAAGTGCTCGAAATAACGAAAAACGAAGAGATTGACAGGAGAAACCAACTTGAGAAGGGTGATTTAGATCGAGAAAAATGGATTTCTATCATAAATACTACCTTTGACCATATTGGAGGTAAATTTTTTACCAGATACGAACTATATATTATGCAATTAGTATTTGTTGATTTGAATGCACAAACTAAAGCAATTCTTTATATACTCTTTTGCCTTTAAAAACGAATTCACGATGATTTTTGTGGTAATGCTATTTTGTCAATTTTACTTTCATCTTGTTGTTTAATCATTAGTCAGCATAATTGTAGTTTGTTGGTTGTATTATTGTTTAATTTTTTTATCGTTATTTATTGTTTCTAATTACGTGAAGCATTATATCTTAATTGGATGATGAACTCAATCAATATTTTTGCTTGGCTGGGCTAGACAAACTCCACACCAATCCCCAAATCTGAAAACTCAATTATCTTTTGCAGGGGGCTTTAAAGCCATTCTAACAGATCGTAATAAGTTGGTCGTAACAGTTGGTGGAGTGACTGCTCTGGCAGCCGGGGTCTACACAACAAGGTATAAATTGTCCATAAAGTTTGGAATGAGCTACTATAAACGAGGAAGGAGGGAAAAAATTGGTTGAGTGTTATTTTTGCATGGCTAGCCCCATTTTTAGAGAATATACAACTTTAAGTTTATGCCCTCTATTTATCAGACTATTTCTTATCTCAGTAGTGAAACTTTACATTGTTATTTGCATGCTGCTATGTATAATTTACATTCAGATTGTACCTAATGTAGGGAAGGTGCACGGGTTATTTGGGGATATGTTGATAGAATATTGGGACAACCATCATTGATCCGAGAGTCCTCCAGAGGGAAATACCCCTGGTCTGGCACGTTTTCTCGAGCCAAAAGCACCCTTTCTCGACTTGCTAAACCAGAATCTGTTTCAAATAATGGAAAGGGTTTTGGCGATGTAATTTTGCATCCTTCTCTTAGTAAGAGAATTGAGCAGCTGGCGTTTGCAACTGAAAACACAAAATTACATCAGGCACCATTCAGAAACGTGCTTTTTTATGGCCCTCCAGGAACAGGGAAGACAATGGCTGCCAGAGAGTTGGCTTACAAATCGGTACGACTTTGTACTTATCCATTTATCTTCTTGTTCCAATTTGATGTTTTTCAATGTCCAAAAAAAATATGTTTCATGTTATTTACCTTGTTTTGTCAACGTGTCAAATAAGTAGGGAATTGGTTGTATGCATTGTTTATGCTATCCTATATTAAGTAGAAGTGATCAACATATTAGCAAAAACGTTTCCTCATTTTTCAGATTTTTTATATATTCCTCTTTATAATTTCTGGCTGACAGTCTAAGGTGAACGATCTACAAATTAATGAATCTAAAATCATCTTTCTTAAAGGCTCTGCAAATTCATTTTCCAATTGTCTTTCTAAATTCAATGCAAGTTCTTTTTCTGTGGAATTTTGCAGTTATTAGCTTACAAGTGGGTATTCAGTACCATGCTTCTGGTTATTGCTGTTTTATGAATTGCATCTTTTTTTTTTTTTGAATGGCAAATATATATTATATATTAAATATAAAATGGAGAAATCTCCTACAAGAGAAATCTCCTTGAAGTGTATCCTGAACATTTGACCTTATTTGCTCATCATTTTTTTAACTGATATTCTTTCCTTCTAGATAAAATGATATTTTGTCTGAATTTTTGTTTTCAATTTAAATTCAGGGATTGGATTATGCATTGATGACTGGAGGAGATGTTGCTCCACTCGGATCACAGGCTGTAACAAAGATACACGAGTTGTTTGATTGGGCCAAGAAGTCCAATAGGGGTTTACTGCTTTTTATTGACGAAGCTGATGCATTTCTATGCGAGTAAGCAATGCATCTACCATTCCATGCTTTTCATATATTATTATCCAACTCGGTTCTTGTGGCATCATAAGATGATTATGATTAGCCTGATGCAATTTCATTACTTTTTTTAAGAAGCAAAGTTCCAAAAAGTGAGTAAAAGTTGCAATGTTAATGAAACTAACATTAGTTGAGAATTGTCTGAGTAAATTGGATGAATTTTGCAGGCGGAACAAGACGTATATGAGTGAAGCACAAAGAAGTGCACTAAATGCCCTTCTCTTTCGTACCGGTGACCAATCTAAAGACATAGTCCTTGCCCTTGCGACGAACCGTCCTGGTGACCTTGATTCAGCTGTAGCAGACCGTATTGATGAGGTCCTAGAATTTCCCTTGCCTGGGGAAGAGGAGCGTTTTAAACTTCTTAAGCTCTACCTAGACAAGTACATAGCTCAAGCTGGATCAAGAAAATCTGGTTTATTATCATTGTTCAAAGCAAGCCCACAAAAGATAGAGATTAAAGGATTGAGCGATGATATCATAAAGGAAGCCGCAGCTAAAACCGATGGATTTTCCGGAAGGGAAATAGCGAAACTGATGGCAAGTGTCCAAGCTGCCGTGTATGGAAGCGACAACTGTATCCTTGACGCAAGCTTGTTCCGTGAAGTTGTAGATTATAAGGTTGCTGAGCATCAACAAAGAATAAAATTGGCAGCTTCTGATAAAGCTTAG
Protein sequence

>MS.gene82880.t1

MEVSWELHRFWVEIRLRVKLRRRHGEALTAATTATVSFSDGAIPSSSSGTDSSSKVGNDNPRSASSGFDPEPLEKGLKALKQISASSYAKKVFEILKKQEETRQAELAAKVAEFNRMKAQLETEKQRIVYDEEKKLAQHQAQTKSQMAKYEDELARKRMQAENEYHRVRNQELVKLQEDSSIRLEQTRLETEKHIQALRKQTIEEKAKLEHDTIRETALAKAKGKVLEITKNEEIDRRNQLEKGDLDREKWISIINTTFDHIGGGFKAILTDRNKLVVTVGGVTALAAGVYTTREGARVIWGYVDRILGQPSLIRESSRGKYPWSGTFSRAKSTLSRLAKPESVSNNGKGFGDVILHPSLSKRIEQLAFATENTKLHQAPFRNVLFYGPPGTGKTMAARELAYKSGLDYALMTGGDVAPLGSQAVTKIHELFDWAKKSNRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGEEERFKLLKLYLDKYIAQAGSRKSGLLSLFKASPQKIEIKGLSDDIIKEAAAKTDGFSGREIAKLMASVQAAVYGSDNCILDASLFREVVDYKVAEHQQRIKLAASDKA