Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053007.t1 | XP_003618203.2 | 91.4 | 593 | 51 | 0 | 79 | 671 | 12 | 604 | 1.80E-291 | 1011.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053007.t1 | Q6PAX2 | 39.0 | 559 | 310 | 6 | 108 | 664 | 37 | 566 | 6.8e-82 | 306.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053007.t1 | G7KHK9 | 91.4 | 593 | 51 | 0 | 79 | 671 | 12 | 604 | 1.3e-291 | 1011.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053007 | MS.gene058030 | 0.813072 | 3.08E-51 | -1.69E-46 |
MS.gene053007 | MS.gene06323 | 0.809977 | 1.45E-50 | -1.69E-46 |
MS.gene053007 | MS.gene064682 | 0.809207 | 2.12E-50 | -1.69E-46 |
MS.gene053007 | MS.gene065464 | 0.802807 | 4.71E-49 | -1.69E-46 |
MS.gene053007 | MS.gene07159 | 0.802407 | 5.69E-49 | -1.69E-46 |
MS.gene053007 | MS.gene20679 | 0.800035 | 1.74E-48 | -1.69E-46 |
MS.gene053007 | MS.gene20681 | 0.825899 | 3.64E-54 | -1.69E-46 |
MS.gene053007 | MS.gene42324 | 0.851314 | 9.62E-61 | -1.69E-46 |
MS.gene053007 | MS.gene42882 | 0.848127 | 7.47E-60 | -1.69E-46 |
MS.gene053007 | MS.gene52941 | 0.81928 | 1.26E-52 | -1.69E-46 |
MS.gene053007 | MS.gene59380 | 0.803767 | 2.98E-49 | -1.69E-46 |
MS.gene053007 | MS.gene68979 | 0.802127 | 6.50E-49 | -1.69E-46 |
MS.gene053007 | MS.gene71825 | 0.80462 | 1.98E-49 | -1.69E-46 |
MS.gene053007 | MS.gene74499 | 0.823363 | 1.44E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene053007 | MS.gene59380 | PPI |
MS.gene053007 | MS.gene064542 | PPI |
MS.gene053007 | MS.gene82880 | PPI |
MS.gene032574 | MS.gene053007 | PPI |
MS.gene053007 | MS.gene73119 | PPI |
MS.gene053007 | MS.gene047793 | PPI |
MS.gene035805 | MS.gene053007 | PPI |
MS.gene02446 | MS.gene053007 | PPI |
MS.gene053007 | MS.gene010517 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053007.t1 | MTR_6g005760 | 95.278 | 593 | 28 | 0 | 79 | 671 | 12 | 604 | 0.0 | 1139 |
MS.gene053007.t1 | MTR_6g005760 | 95.798 | 476 | 20 | 0 | 196 | 671 | 1 | 476 | 0.0 | 939 |
MS.gene053007.t1 | MTR_4g077880 | 73.274 | 565 | 150 | 1 | 107 | 670 | 46 | 610 | 0.0 | 833 |
MS.gene053007.t1 | MTR_6g005760 | 94.366 | 426 | 24 | 0 | 79 | 504 | 12 | 437 | 0.0 | 810 |
MS.gene053007.t1 | MTR_5g020530 | 60.862 | 580 | 211 | 5 | 99 | 667 | 50 | 624 | 0.0 | 677 |
MS.gene053007.t1 | MTR_4g077880 | 68.090 | 398 | 127 | 0 | 107 | 504 | 46 | 443 | 0.0 | 545 |
MS.gene053007.t1 | MTR_8g099065 | 28.502 | 207 | 118 | 5 | 429 | 630 | 570 | 751 | 1.64e-15 | 80.9 |
MS.gene053007.t1 | MTR_3g089100 | 30.622 | 209 | 111 | 6 | 429 | 630 | 968 | 1149 | 3.40e-15 | 80.1 |
MS.gene053007.t1 | MTR_3g092080 | 35.099 | 151 | 91 | 5 | 429 | 574 | 121 | 269 | 3.57e-15 | 78.6 |
MS.gene053007.t1 | MTR_3g089100 | 30.622 | 209 | 111 | 6 | 429 | 630 | 939 | 1120 | 3.70e-15 | 80.1 |
MS.gene053007.t1 | MTR_3g112260 | 33.553 | 152 | 93 | 5 | 429 | 573 | 172 | 322 | 3.74e-15 | 78.6 |
MS.gene053007.t1 | MTR_3g092080 | 35.099 | 151 | 91 | 5 | 429 | 574 | 121 | 269 | 3.78e-15 | 77.8 |
MS.gene053007.t1 | MTR_3g089100 | 30.622 | 209 | 111 | 6 | 429 | 630 | 934 | 1115 | 3.79e-15 | 80.1 |
MS.gene053007.t1 | MTR_1g088730 | 29.665 | 209 | 113 | 6 | 429 | 630 | 969 | 1150 | 6.63e-15 | 79.3 |
MS.gene053007.t1 | MTR_3g117230 | 33.553 | 152 | 93 | 5 | 429 | 573 | 175 | 325 | 6.84e-15 | 77.8 |
MS.gene053007.t1 | MTR_7g101870 | 29.577 | 213 | 116 | 8 | 424 | 628 | 510 | 696 | 8.70e-15 | 78.6 |
MS.gene053007.t1 | MTR_7g101870 | 30.872 | 149 | 98 | 4 | 429 | 573 | 242 | 389 | 9.40e-14 | 75.5 |
MS.gene053007.t1 | MTR_1g101870 | 35.714 | 154 | 91 | 4 | 429 | 576 | 542 | 693 | 9.26e-15 | 78.6 |
MS.gene053007.t1 | MTR_1g101870 | 35.714 | 154 | 91 | 4 | 429 | 576 | 594 | 745 | 9.52e-15 | 78.6 |
MS.gene053007.t1 | MTR_1g088750 | 29.665 | 209 | 113 | 6 | 429 | 630 | 926 | 1107 | 1.12e-14 | 78.6 |
MS.gene053007.t1 | MTR_1g088750 | 29.665 | 209 | 113 | 6 | 429 | 630 | 975 | 1156 | 1.20e-14 | 78.6 |
MS.gene053007.t1 | MTR_1g063380 | 29.245 | 212 | 118 | 8 | 424 | 628 | 509 | 695 | 1.58e-14 | 77.8 |
MS.gene053007.t1 | MTR_1g063380 | 30.872 | 149 | 98 | 4 | 429 | 573 | 241 | 388 | 3.25e-13 | 73.6 |
MS.gene053007.t1 | MTR_4g053350 | 28.019 | 207 | 121 | 5 | 429 | 631 | 162 | 344 | 1.75e-14 | 76.6 |
MS.gene053007.t1 | MTR_5g009840 | 28.502 | 207 | 118 | 5 | 429 | 630 | 552 | 733 | 1.75e-14 | 77.8 |
MS.gene053007.t1 | MTR_4g053350 | 28.019 | 207 | 121 | 5 | 429 | 631 | 162 | 344 | 1.89e-14 | 76.6 |
MS.gene053007.t1 | MTR_2g024440 | 33.766 | 154 | 97 | 4 | 431 | 581 | 343 | 494 | 2.11e-14 | 77.0 |
MS.gene053007.t1 | MTR_2g024440 | 33.766 | 154 | 97 | 4 | 431 | 581 | 342 | 493 | 2.20e-14 | 77.0 |
MS.gene053007.t1 | MTR_2g024440 | 33.766 | 154 | 97 | 4 | 431 | 581 | 260 | 411 | 2.22e-14 | 76.6 |
MS.gene053007.t1 | MTR_2g095210 | 31.875 | 160 | 101 | 5 | 424 | 576 | 437 | 595 | 2.37e-14 | 77.0 |
MS.gene053007.t1 | MTR_4g094270 | 31.683 | 202 | 105 | 8 | 431 | 624 | 194 | 370 | 2.50e-14 | 75.9 |
MS.gene053007.t1 | MTR_3g092070 | 33.121 | 157 | 86 | 4 | 429 | 574 | 118 | 266 | 2.73e-14 | 75.5 |
MS.gene053007.t1 | MTR_2g086160 | 27.363 | 201 | 118 | 5 | 429 | 625 | 167 | 343 | 3.03e-14 | 75.1 |
MS.gene053007.t1 | MTR_6g033740 | 29.327 | 208 | 114 | 6 | 429 | 630 | 536 | 716 | 4.73e-14 | 76.3 |
MS.gene053007.t1 | MTR_2g086160 | 27.053 | 207 | 123 | 5 | 429 | 631 | 167 | 349 | 5.19e-14 | 75.1 |
MS.gene053007.t1 | MTR_1g083330 | 35.032 | 157 | 94 | 5 | 424 | 573 | 198 | 353 | 5.82e-14 | 75.1 |
MS.gene053007.t1 | MTR_4g033235 | 35.032 | 157 | 94 | 5 | 424 | 573 | 199 | 354 | 6.45e-14 | 74.7 |
MS.gene053007.t1 | MTR_4g011810 | 27.488 | 211 | 117 | 6 | 429 | 628 | 277 | 462 | 7.47e-14 | 75.1 |
MS.gene053007.t1 | MTR_3g092070 | 33.766 | 154 | 91 | 4 | 428 | 574 | 117 | 266 | 8.88e-14 | 73.6 |
MS.gene053007.t1 | MTR_1g099480 | 33.333 | 153 | 96 | 4 | 429 | 576 | 505 | 656 | 4.70e-13 | 73.2 |
MS.gene053007.t1 | MTR_2g095320 | 30.201 | 149 | 99 | 4 | 429 | 573 | 185 | 332 | 5.55e-13 | 72.8 |
MS.gene053007.t1 | MTR_6g023875 | 28.436 | 211 | 114 | 8 | 427 | 628 | 415 | 597 | 3.60e-12 | 70.1 |
MS.gene053007.t1 | MTR_8g056860 | 31.847 | 157 | 89 | 4 | 431 | 573 | 507 | 659 | 5.13e-12 | 69.7 |
MS.gene053007.t1 | MTR_8g099065 | 32.308 | 130 | 82 | 3 | 429 | 553 | 570 | 698 | 6.30e-12 | 69.3 |
MS.gene053007.t1 | MTR_7g089040 | 26.772 | 254 | 152 | 9 | 423 | 667 | 715 | 943 | 1.05e-11 | 68.9 |
MS.gene053007.t1 | MTR_7g075520 | 26.872 | 227 | 147 | 6 | 429 | 638 | 247 | 471 | 2.34e-11 | 67.0 |
MS.gene053007.t1 | MTR_2g007010 | 33.537 | 164 | 97 | 7 | 429 | 583 | 273 | 433 | 4.41e-11 | 66.6 |
MS.gene053007.t1 | MTR_7g088830 | 27.652 | 264 | 149 | 12 | 415 | 667 | 684 | 916 | 7.43e-11 | 66.2 |
MS.gene053007.t1 | MTR_8g099605 | 31.515 | 165 | 97 | 5 | 424 | 573 | 434 | 597 | 7.68e-11 | 65.9 |
MS.gene053007.t1 | MTR_8g099605 | 31.515 | 165 | 97 | 5 | 424 | 573 | 193 | 356 | 8.39e-11 | 65.5 |
MS.gene053007.t1 | MTR_7g010800 | 28.641 | 206 | 113 | 7 | 431 | 628 | 243 | 422 | 9.83e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053007.t1 | AT3G03060 | 75.000 | 572 | 139 | 2 | 99 | 669 | 58 | 626 | 0.0 | 889 |
MS.gene053007.t1 | AT5G16930 | 71.953 | 599 | 156 | 3 | 82 | 669 | 41 | 638 | 0.0 | 879 |
MS.gene053007.t1 | AT2G18330 | 63.731 | 579 | 201 | 5 | 95 | 666 | 52 | 628 | 0.0 | 697 |
MS.gene053007.t1 | AT4G36580 | 61.111 | 576 | 217 | 4 | 96 | 667 | 51 | 623 | 0.0 | 681 |
MS.gene053007.t1 | AT3G19740 | 28.745 | 247 | 129 | 8 | 429 | 669 | 738 | 943 | 1.41e-18 | 90.9 |
MS.gene053007.t1 | AT1G50140 | 30.841 | 214 | 113 | 7 | 429 | 636 | 726 | 910 | 3.30e-18 | 89.7 |
MS.gene053007.t1 | AT1G50140 | 30.841 | 214 | 113 | 7 | 429 | 636 | 726 | 910 | 3.30e-18 | 89.7 |
MS.gene053007.t1 | AT1G50140 | 30.841 | 214 | 113 | 7 | 429 | 636 | 748 | 932 | 3.49e-18 | 89.7 |
MS.gene053007.t1 | AT1G50140 | 30.841 | 214 | 113 | 7 | 429 | 636 | 748 | 932 | 3.49e-18 | 89.7 |
MS.gene053007.t1 | AT1G50140 | 30.841 | 214 | 113 | 7 | 429 | 636 | 748 | 932 | 3.49e-18 | 89.7 |
MS.gene053007.t1 | AT5G19990 | 32.673 | 202 | 103 | 8 | 431 | 624 | 196 | 372 | 7.69e-16 | 80.9 |
MS.gene053007.t1 | AT5G19990 | 32.673 | 202 | 103 | 8 | 431 | 624 | 196 | 372 | 7.69e-16 | 80.9 |
MS.gene053007.t1 | AT5G19990 | 32.673 | 202 | 103 | 8 | 431 | 624 | 138 | 314 | 1.17e-15 | 79.7 |
MS.gene053007.t1 | AT5G20000 | 32.673 | 202 | 103 | 8 | 431 | 624 | 196 | 372 | 1.24e-15 | 80.1 |
MS.gene053007.t1 | AT3G53230 | 30.047 | 213 | 115 | 9 | 424 | 628 | 509 | 695 | 1.40e-15 | 81.3 |
MS.gene053007.t1 | AT3G53230 | 30.872 | 149 | 98 | 4 | 429 | 573 | 241 | 388 | 1.50e-13 | 74.7 |
MS.gene053007.t1 | AT4G04180 | 36.601 | 153 | 79 | 5 | 431 | 573 | 362 | 506 | 1.74e-15 | 80.5 |
MS.gene053007.t1 | AT4G04180 | 36.601 | 153 | 79 | 5 | 431 | 573 | 357 | 501 | 1.79e-15 | 80.5 |
MS.gene053007.t1 | AT1G45000 | 33.553 | 152 | 93 | 5 | 429 | 573 | 172 | 322 | 1.79e-15 | 79.3 |
MS.gene053007.t1 | AT5G53540 | 35.294 | 153 | 88 | 4 | 429 | 574 | 121 | 269 | 5.46e-15 | 78.2 |
MS.gene053007.t1 | AT5G03340 | 30.516 | 213 | 114 | 9 | 424 | 628 | 508 | 694 | 6.40e-15 | 79.0 |
MS.gene053007.t1 | AT5G03340 | 30.872 | 149 | 98 | 4 | 429 | 573 | 240 | 387 | 3.68e-13 | 73.6 |
MS.gene053007.t1 | AT1G02890 | 29.665 | 209 | 113 | 6 | 429 | 630 | 978 | 1159 | 6.91e-15 | 79.3 |
MS.gene053007.t1 | AT1G53750 | 27.863 | 262 | 153 | 10 | 336 | 573 | 102 | 351 | 9.20e-15 | 77.4 |
MS.gene053007.t1 | AT5G43010 | 32.895 | 152 | 94 | 5 | 429 | 573 | 172 | 322 | 1.08e-14 | 77.0 |
MS.gene053007.t1 | AT4G28000 | 32.692 | 156 | 93 | 4 | 429 | 576 | 553 | 704 | 1.25e-14 | 78.2 |
MS.gene053007.t1 | AT4G28000 | 32.692 | 156 | 93 | 4 | 429 | 576 | 553 | 704 | 1.25e-14 | 78.2 |
MS.gene053007.t1 | AT4G28000 | 32.692 | 156 | 93 | 4 | 429 | 576 | 551 | 702 | 1.31e-14 | 78.2 |
MS.gene053007.t1 | AT3G09840 | 29.717 | 212 | 116 | 9 | 424 | 627 | 508 | 694 | 1.67e-14 | 77.8 |
MS.gene053007.t1 | AT3G09840 | 30.872 | 149 | 98 | 4 | 429 | 573 | 240 | 387 | 3.77e-13 | 73.6 |
MS.gene053007.t1 | AT4G02480 | 29.665 | 209 | 113 | 6 | 429 | 630 | 997 | 1178 | 2.13e-14 | 77.8 |
MS.gene053007.t1 | AT4G27680 | 36.364 | 154 | 85 | 6 | 429 | 574 | 118 | 266 | 2.34e-14 | 75.9 |
MS.gene053007.t1 | AT1G64110 | 32.051 | 156 | 94 | 4 | 429 | 576 | 554 | 705 | 2.84e-14 | 77.0 |
MS.gene053007.t1 | AT1G64110 | 32.051 | 156 | 94 | 4 | 429 | 576 | 554 | 705 | 2.84e-14 | 77.0 |
MS.gene053007.t1 | AT1G64110 | 32.051 | 156 | 94 | 4 | 429 | 576 | 552 | 703 | 2.96e-14 | 77.0 |
MS.gene053007.t1 | AT1G64110 | 32.051 | 156 | 94 | 4 | 429 | 576 | 552 | 703 | 2.96e-14 | 77.0 |
MS.gene053007.t1 | AT1G53780 | 34.810 | 158 | 95 | 5 | 423 | 573 | 367 | 523 | 2.97e-14 | 76.6 |
MS.gene053007.t1 | AT1G53780 | 34.810 | 158 | 95 | 5 | 423 | 573 | 367 | 523 | 2.97e-14 | 76.6 |
MS.gene053007.t1 | AT1G64110 | 32.051 | 156 | 94 | 4 | 429 | 576 | 549 | 700 | 2.98e-14 | 77.0 |
MS.gene053007.t1 | AT1G53780 | 34.810 | 158 | 95 | 5 | 423 | 573 | 388 | 544 | 3.00e-14 | 76.6 |
MS.gene053007.t1 | AT1G53780 | 34.810 | 158 | 95 | 5 | 423 | 573 | 366 | 522 | 3.29e-14 | 76.6 |
MS.gene053007.t1 | AT5G52882 | 33.117 | 154 | 95 | 4 | 429 | 576 | 550 | 701 | 3.61e-14 | 76.6 |
MS.gene053007.t1 | AT1G09100 | 35.032 | 157 | 94 | 5 | 424 | 573 | 198 | 353 | 1.59e-13 | 73.6 |
MS.gene053007.t1 | AT1G80350 | 27.488 | 211 | 117 | 6 | 429 | 628 | 271 | 456 | 3.50e-13 | 73.2 |
MS.gene053007.t1 | AT2G27600 | 26.570 | 207 | 124 | 5 | 429 | 631 | 164 | 346 | 3.54e-13 | 72.8 |
MS.gene053007.t1 | AT4G24860 | 28.708 | 209 | 115 | 6 | 429 | 630 | 854 | 1035 | 3.88e-13 | 73.6 |
MS.gene053007.t1 | AT4G24860 | 28.708 | 209 | 115 | 6 | 429 | 630 | 827 | 1008 | 4.01e-13 | 73.6 |
MS.gene053007.t1 | AT3G05530 | 34.395 | 157 | 95 | 5 | 424 | 573 | 199 | 354 | 4.03e-13 | 72.4 |
MS.gene053007.t1 | AT4G24860 | 28.708 | 209 | 115 | 6 | 429 | 630 | 852 | 1033 | 4.15e-13 | 73.6 |
MS.gene053007.t1 | AT4G24860 | 28.708 | 209 | 115 | 6 | 429 | 630 | 850 | 1031 | 5.27e-13 | 73.2 |
MS.gene053007.t1 | AT1G79560 | 26.073 | 303 | 169 | 12 | 393 | 668 | 485 | 759 | 1.03e-12 | 72.0 |
MS.gene053007.t1 | AT1G79560 | 26.073 | 303 | 169 | 12 | 393 | 668 | 485 | 759 | 1.04e-12 | 72.0 |
MS.gene053007.t1 | AT1G79560 | 26.073 | 303 | 169 | 12 | 393 | 668 | 485 | 759 | 1.04e-12 | 72.0 |
MS.gene053007.t1 | AT3G02450 | 34.228 | 149 | 91 | 5 | 431 | 574 | 368 | 514 | 2.03e-12 | 70.9 |
MS.gene053007.t1 | AT1G62130 | 29.064 | 203 | 110 | 6 | 429 | 630 | 780 | 949 | 2.17e-12 | 71.2 |
MS.gene053007.t1 | AT1G62130 | 29.064 | 203 | 110 | 6 | 429 | 630 | 787 | 956 | 2.41e-12 | 70.9 |
MS.gene053007.t1 | AT3G27120 | 28.436 | 211 | 114 | 7 | 427 | 628 | 433 | 615 | 2.70e-12 | 70.5 |
MS.gene053007.t1 | AT3G56690 | 28.155 | 206 | 118 | 7 | 429 | 629 | 417 | 597 | 6.53e-11 | 66.2 |
Find 168 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGGGAATTACATCGATTT+TGG | 0.148803 | 6.2:+1631500 | MS.gene053007:CDS |
GCCATTGTCTTCCCTGTTCC+TGG | 0.205135 | 6.2:-1636015 | None:intergenic |
TCAAATAATGGAAAGGGTTT+TGG | 0.219162 | 6.2:+1635880 | MS.gene053007:CDS |
GGGAAGGTGCACGGGTTATT+TGG | 0.224243 | 6.2:+1635728 | MS.gene053007:intron |
GGGATATGTTGATAGAATAT+TGG | 0.232274 | 6.2:+1635750 | MS.gene053007:CDS |
CCAGAATCTGTTTCAAATAA+TGG | 0.246142 | 6.2:+1635868 | MS.gene053007:CDS |
GGAAGGTGCACGGGTTATTT+GGG | 0.252159 | 6.2:+1635729 | MS.gene053007:CDS |
GGCGCTGGTGGCGGCGATTA+AGG | 0.256397 | 6.2:-1632284 | None:intergenic |
CCATTATTTGAAACAGATTC+TGG | 0.258534 | 6.2:-1635868 | None:intergenic |
CGGCGGTCGCGGAGCTGTTA+AGG | 0.259090 | 6.2:+1631371 | MS.gene053007:CDS |
TGCTTCATCGTACGCTAAAA+AGG | 0.285240 | 6.2:+1632456 | MS.gene053007:CDS |
AATACTACCTTTGACCATAT+TGG | 0.291759 | 6.2:+1635030 | MS.gene053007:CDS |
CCACAAAAGATAGAGATTAA+AGG | 0.293367 | 6.2:+1638548 | MS.gene053007:CDS |
TAAACCCCTATTGGACTTCT+TGG | 0.299729 | 6.2:-1638007 | None:intergenic |
TGTTTCCCCTCTTTGTGTTC+TGG | 0.300083 | 6.2:-1631343 | None:intergenic |
GTCCTAGAATTTCCCTTGCC+TGG | 0.304734 | 6.2:+1638425 | MS.gene053007:CDS |
CCGTGAAGTCGTAGATTATA+AGG | 0.320677 | 6.2:+1638706 | MS.gene053007:CDS |
AATCCAAGGAGTGCTTCTTC+TGG | 0.327589 | 6.2:+1632382 | MS.gene053007:CDS |
GCTCTTGGTTCCTTACTCTA+TGG | 0.329815 | 6.2:-1634759 | None:intergenic |
GCATCAACAAAGAATAAAAT+TGG | 0.330618 | 6.2:+1638736 | MS.gene053007:CDS |
CCCCAGGCAAGGGAAATTCT+AGG | 0.335721 | 6.2:-1638427 | None:intergenic |
CAGTTTCGCTATTTCCCTTC+CGG | 0.338361 | 6.2:-1638621 | None:intergenic |
GATCCTGAACCTCTTGAAAA+AGG | 0.346940 | 6.2:+1632409 | MS.gene053007:CDS |
GGATATGTTGATAGAATATT+GGG | 0.347459 | 6.2:+1635751 | MS.gene053007:CDS |
GGAGTGACTGCTCTGGCAGC+CGG | 0.356065 | 6.2:+1635466 | MS.gene053007:CDS |
AGAGGCGGTGGATGCGGCGG+CGG | 0.359660 | 6.2:+1631292 | MS.gene053007:CDS |
GGAGACAAGGCAAGCTGAAT+TGG | 0.367167 | 6.2:+1632700 | MS.gene053007:CDS |
TGATTTCATGGAGGTGAGTT+GGG | 0.372960 | 6.2:+1631483 | MS.gene053007:CDS |
CAAGCTGGATCAAGAAAATC+TGG | 0.381037 | 6.2:+1638500 | MS.gene053007:CDS |
TGGGGCAGAAGGTGATTTCA+TGG | 0.387315 | 6.2:+1631471 | MS.gene053007:intron |
AAGTCGAGAAAGGGTGCTTT+TGG | 0.394444 | 6.2:-1635839 | None:intergenic |
TTGGGTTGAAATCAGGTTAA+GGG | 0.399695 | 6.2:+1631519 | MS.gene053007:CDS |
GAGTGACTGCTCTGGCAGCC+GGG | 0.400139 | 6.2:+1635467 | MS.gene053007:CDS |
GGCGGTCGCGGAGCTGTTAA+GGG | 0.403053 | 6.2:+1631372 | MS.gene053007:CDS |
TAATCGAATGAAAGCACAAT+TGG | 0.409012 | 6.2:+1632742 | MS.gene053007:CDS |
TCCTAGAATTTCCCTTGCCT+GGG | 0.409654 | 6.2:+1638426 | MS.gene053007:CDS |
ATTGGGCCAAGAAGTCCAAT+AGG | 0.417609 | 6.2:+1638001 | MS.gene053007:CDS |
CTTATTACGATCTGTTAGAA+TGG | 0.422073 | 6.2:-1635425 | None:intergenic |
GATACACGAGTTGTTTGATT+GGG | 0.423129 | 6.2:+1637984 | MS.gene053007:CDS |
TTTGGGTTGAAATCAGGTTA+AGG | 0.423578 | 6.2:+1631518 | MS.gene053007:CDS |
GAGGCGGTGGATGCGGCGGC+GGG | 0.430511 | 6.2:+1631293 | MS.gene053007:CDS |
ATTTCCCTTGCCTGGGGAAG+AGG | 0.433738 | 6.2:+1638433 | MS.gene053007:CDS |
AGTGTCCAAGCTGCCGTGTA+TGG | 0.437138 | 6.2:+1638650 | MS.gene053007:CDS |
ACAGCACTTGCAAAAGCAAA+AGG | 0.438572 | 6.2:+1634913 | MS.gene053007:CDS |
AGCAACGGTGGCGCTGGTGG+CGG | 0.441930 | 6.2:-1632293 | None:intergenic |
CAGAGAGTTGGCTTACAAAT+CGG | 0.447484 | 6.2:+1636041 | MS.gene053007:CDS |
TTGGGCCAAGAAGTCCAATA+GGG | 0.448894 | 6.2:+1638002 | MS.gene053007:CDS |
GCCTCTGTTTCTCGCTGCTA+TGG | 0.451628 | 6.2:-1631275 | None:intergenic |
CAAGGACTATGTCTTTAGAT+TGG | 0.454660 | 6.2:-1638343 | None:intergenic |
TCTGTTTCAAATAATGGAAA+GGG | 0.454708 | 6.2:+1635874 | MS.gene053007:CDS |
GTGATTTCATGGAGGTGAGT+TGG | 0.455330 | 6.2:+1631482 | MS.gene053007:CDS |
CCTTATAATCTACGACTTCA+CGG | 0.459640 | 6.2:-1638706 | None:intergenic |
CTGGTTTAGCAAGTCGAGAA+AGG | 0.462717 | 6.2:-1635849 | None:intergenic |
CAAAGAGGGGAAACACCAAC+CGG | 0.463386 | 6.2:+1631351 | MS.gene053007:CDS |
AGATACACGAGTTGTTTGAT+TGG | 0.464111 | 6.2:+1637983 | MS.gene053007:CDS |
TCGAGAAAACGTGCCAGACC+AGG | 0.465385 | 6.2:-1635815 | None:intergenic |
AGACCAGGGGTATTTCCCTC+TGG | 0.471013 | 6.2:-1635800 | None:intergenic |
ATTGAGCGATGATATCATAA+AGG | 0.472275 | 6.2:+1638571 | MS.gene053007:CDS |
GAAACACCAACCGGCGGTCG+CGG | 0.472954 | 6.2:+1631360 | MS.gene053007:CDS |
GCCACCGTTGCTTTCTCCGA+TGG | 0.473685 | 6.2:+1632304 | MS.gene053007:CDS |
GCCCTTGCGACGAACCGTCC+TGG | 0.475674 | 6.2:+1638365 | MS.gene053007:CDS |
ATCTCAGATGGCTAAATATG+AGG | 0.478813 | 6.2:+1634611 | MS.gene053007:CDS |
CTAAATCACCCTTCTCAAGT+TGG | 0.479623 | 6.2:-1634981 | None:intergenic |
AGGATGAGTTGGCAAGGAAG+AGG | 0.479629 | 6.2:+1634631 | MS.gene053007:CDS |
CACCAGGACGGTTCGTCGCA+AGG | 0.481861 | 6.2:-1638367 | None:intergenic |
CGCTTCCATACACGGCAGCT+TGG | 0.482291 | 6.2:-1638655 | None:intergenic |
TGCGGCGGCGGGCGATCTGA+CGG | 0.490274 | 6.2:+1631304 | MS.gene053007:CDS |
ACCCGCTTTCGAAGATGAAT+CGG | 0.491673 | 6.2:-1632353 | None:intergenic |
TGTTGCTCCACTCGGATCAC+AGG | 0.494047 | 6.2:+1637951 | MS.gene053007:CDS |
AGAAACAGAGGCGGTGGATG+CGG | 0.494271 | 6.2:+1631286 | MS.gene053007:CDS |
AAAATGAGTACCATAGAGTA+AGG | 0.494834 | 6.2:+1634749 | MS.gene053007:CDS |
GGAGAAAGCAACGGTGGCGC+TGG | 0.495494 | 6.2:-1632299 | None:intergenic |
TTGTCTTCCCTGTTCCTGGA+GGG | 0.498774 | 6.2:-1636011 | None:intergenic |
GGCTAAATATGAGGATGAGT+TGG | 0.500126 | 6.2:+1634620 | MS.gene053007:CDS |
AGAGGGAAATACCCCTGGTC+TGG | 0.500897 | 6.2:+1635802 | MS.gene053007:CDS |
TGAAAACACAAAATTACATC+AGG | 0.504750 | 6.2:+1635960 | MS.gene053007:CDS |
AATGCCCTTCTCTTTCGTAC+TGG | 0.505763 | 6.2:+1638317 | MS.gene053007:CDS |
CGCTCCTCTTCCCCAGGCAA+GGG | 0.507955 | 6.2:-1638437 | None:intergenic |
GACGGTTCGTCGCAAGGGCA+AGG | 0.508323 | 6.2:-1638361 | None:intergenic |
TGAAGAAGGAATGGCGCCAT+CGG | 0.514941 | 6.2:-1632320 | None:intergenic |
GCAAGCTGAATTGGCTGCTA+AGG | 0.515586 | 6.2:+1632709 | MS.gene053007:CDS |
ATTTCCCTCTGGAGGACTCT+CGG | 0.515937 | 6.2:-1635789 | None:intergenic |
TGAGATATTGAAGAAACAAG+AGG | 0.518331 | 6.2:+1632679 | MS.gene053007:CDS |
ATCTGTTTCAAATAATGGAA+AGG | 0.518634 | 6.2:+1635873 | MS.gene053007:CDS |
AATCCAGAAGAAGCACTCCT+TGG | 0.521894 | 6.2:-1632385 | None:intergenic |
CGATTTGTAAGCCAACTCTC+TGG | 0.521968 | 6.2:-1636040 | None:intergenic |
GACAAGTACATAGCTCAAGC+TGG | 0.523738 | 6.2:+1638485 | MS.gene053007:CDS |
ACCGATTCATCTTCGAAAGC+GGG | 0.525273 | 6.2:+1632352 | MS.gene053007:CDS |
TGGTTTAGCAAGTCGAGAAA+GGG | 0.525545 | 6.2:-1635848 | None:intergenic |
ACGCTCCTCTTCCCCAGGCA+AGG | 0.527101 | 6.2:-1638438 | None:intergenic |
TGCTGAAGATGAAGAAGGAA+TGG | 0.530211 | 6.2:-1632329 | None:intergenic |
GAGGACTCTCGGATCAATGA+TGG | 0.530746 | 6.2:-1635778 | None:intergenic |
CTTGAGCTATGTACTTGTCT+AGG | 0.530944 | 6.2:-1638481 | None:intergenic |
ACCAGGACGGTTCGTCGCAA+GGG | 0.533090 | 6.2:-1638366 | None:intergenic |
AAGTTGATCGTAACAGTTGG+TGG | 0.534517 | 6.2:+1635445 | MS.gene053007:CDS |
GAAGGTGCACGGGTTATTTG+GGG | 0.534601 | 6.2:+1635730 | MS.gene053007:CDS |
TTGGATTATGCATTGATGAC+TGG | 0.537644 | 6.2:+1637922 | MS.gene053007:CDS |
TTCCCTTCCGGAAAATCCAT+CGG | 0.538043 | 6.2:-1638609 | None:intergenic |
CTTAACAGCTCCGCGACCGC+CGG | 0.538163 | 6.2:-1631370 | None:intergenic |
CCTCCAGAGGGAAATACCCC+TGG | 0.539942 | 6.2:+1635797 | MS.gene053007:CDS |
CTAATGTAGGGAAGGTGCAC+GGG | 0.540661 | 6.2:+1635720 | MS.gene053007:intron |
ACTACCTTTGACCATATTGG+AGG | 0.546392 | 6.2:+1635033 | MS.gene053007:CDS |
TTAAAACGCTCCTCTTCCCC+AGG | 0.548339 | 6.2:-1638443 | None:intergenic |
GCAGCGAGAAACAGAGGCGG+TGG | 0.549527 | 6.2:+1631280 | MS.gene053007:CDS |
GACAATGGCTGCCAGAGAGT+TGG | 0.552771 | 6.2:+1636029 | MS.gene053007:CDS |
TAGTAAGAGAATTGAGCAGC+TGG | 0.554062 | 6.2:+1635927 | MS.gene053007:CDS |
CCTAATGTAGGGAAGGTGCA+CGG | 0.555109 | 6.2:+1635719 | MS.gene053007:intron |
ACAGCTCCGCGACCGCCGGT+TGG | 0.556114 | 6.2:-1631366 | None:intergenic |
CAGGAGAAACCAACTTGAGA+AGG | 0.557237 | 6.2:+1634972 | MS.gene053007:CDS |
ATTGTCTTCCCTGTTCCTGG+AGG | 0.560179 | 6.2:-1636012 | None:intergenic |
GTTGGCAAGGAAGAGGATGC+AGG | 0.565436 | 6.2:+1634638 | MS.gene053007:CDS |
AGAAGATTCATCAATCAGAC+TGG | 0.565440 | 6.2:+1634795 | MS.gene053007:CDS |
CTACGAAGACGGCATGGTGA+AGG | 0.565748 | 6.2:+1631547 | MS.gene053007:CDS |
GGAGGAGATGTTGCTCCACT+CGG | 0.565757 | 6.2:+1637943 | MS.gene053007:CDS |
ATTCTAGGACCTCATCAATA+CGG | 0.565931 | 6.2:-1638412 | None:intergenic |
AGTGACTGCTCTGGCAGCCG+GGG | 0.566373 | 6.2:+1635468 | MS.gene053007:CDS |
GGTCTGCTACAGCTGAATCA+AGG | 0.566819 | 6.2:-1638391 | None:intergenic |
GAAAGCAACGGTGGCGCTGG+TGG | 0.575004 | 6.2:-1632296 | None:intergenic |
TCAATTCTCTTACTAAGAGA+AGG | 0.575379 | 6.2:-1635919 | None:intergenic |
TCGGTTGCTGAAGATGAAGA+AGG | 0.576794 | 6.2:-1632334 | None:intergenic |
TTTACCTCCAATATGGTCAA+AGG | 0.577286 | 6.2:-1635037 | None:intergenic |
CAGCACTTGCAAAAGCAAAA+GGG | 0.577360 | 6.2:+1634914 | MS.gene053007:CDS |
AGTTGGTGGAGTGACTGCTC+TGG | 0.577512 | 6.2:+1635459 | MS.gene053007:CDS |
AACAGAGGCGGTGGATGCGG+CGG | 0.581559 | 6.2:+1631289 | MS.gene053007:CDS |
AAAGCAAACTGTAGAGGAGA+AGG | 0.582383 | 6.2:+1634861 | MS.gene053007:CDS |
ACAGTTGTCGCTTCCATACA+CGG | 0.583469 | 6.2:-1638663 | None:intergenic |
CGAGAAAACGTGCCAGACCA+GGG | 0.583981 | 6.2:-1635814 | None:intergenic |
AATAAGTTGATCGTAACAGT+TGG | 0.597197 | 6.2:+1635442 | MS.gene053007:CDS |
TGAAGAAACAAGAGGAGACA+AGG | 0.599789 | 6.2:+1632687 | MS.gene053007:CDS |
ATACCTTGTTGTGTAGACCC+CGG | 0.606322 | 6.2:-1635485 | None:intergenic |
GGTCACCAGTACGAAAGAGA+AGG | 0.606869 | 6.2:-1638322 | None:intergenic |
AGGAGAAACCAACTTGAGAA+GGG | 0.608125 | 6.2:+1634973 | MS.gene053007:CDS |
AAACTTCCAGAACACAAAGA+GGG | 0.609853 | 6.2:+1631337 | MS.gene053007:CDS |
GTCACCAGTACGAAAGAGAA+GGG | 0.611997 | 6.2:-1638321 | None:intergenic |
GGCACAAACAAAATCTCAGA+TGG | 0.613066 | 6.2:+1634599 | MS.gene053007:CDS |
GAAACTTCCAGAACACAAAG+AGG | 0.614704 | 6.2:+1631336 | MS.gene053007:CDS |
AATATGAGGATGAGTTGGCA+AGG | 0.615642 | 6.2:+1634625 | MS.gene053007:CDS |
AACCGATTCATCTTCGAAAG+CGG | 0.617854 | 6.2:+1632351 | MS.gene053007:CDS |
TAAGGGTGAAGCTACGAAGA+CGG | 0.618795 | 6.2:+1631536 | MS.gene053007:CDS |
CACGGAACAAGCTTGCGTCA+AGG | 0.619585 | 6.2:-1638688 | None:intergenic |
CAGCCGGGGTCTACACAACA+AGG | 0.619731 | 6.2:+1635482 | MS.gene053007:CDS |
GAAGCCGCAGCTAAAACCGA+TGG | 0.622294 | 6.2:+1638593 | MS.gene053007:CDS |
AAGCGGGTAACGATAATCCA+AGG | 0.630177 | 6.2:+1632368 | MS.gene053007:CDS |
GCGGTCGCGGAGCTGTTAAG+GGG | 0.632524 | 6.2:+1631373 | MS.gene053007:CDS |
TTTATGGCCCTCCAGGAACA+GGG | 0.634037 | 6.2:+1636004 | MS.gene053007:CDS |
ACAGCTGAATCAAGGTCACC+AGG | 0.637144 | 6.2:-1638383 | None:intergenic |
GTGAAGCTACGAAGACGGCA+TGG | 0.640587 | 6.2:+1631541 | MS.gene053007:CDS |
TCCATAGCAGCGAGAAACAG+AGG | 0.642297 | 6.2:+1631274 | MS.gene053007:CDS |
AAGGGAAATAGCGAAACTGA+TGG | 0.642775 | 6.2:+1638625 | MS.gene053007:CDS |
CCTAGAATTTCCCTTGCCTG+GGG | 0.646412 | 6.2:+1638427 | MS.gene053007:CDS |
GTTACAGCCTGTGATCCGAG+TGG | 0.647718 | 6.2:-1637958 | None:intergenic |
GGCGCCATCGGAGAAAGCAA+CGG | 0.647778 | 6.2:-1632308 | None:intergenic |
CTGAATCAAGGTCACCAGGA+CGG | 0.653067 | 6.2:-1638379 | None:intergenic |
AACTTCCAGAACACAAAGAG+GGG | 0.653984 | 6.2:+1631338 | MS.gene053007:CDS |
ACTACGAAAGCAAACTGTAG+AGG | 0.655152 | 6.2:+1634855 | MS.gene053007:CDS |
GGCGGCGGGCGATCTGACGG+AGG | 0.663633 | 6.2:+1631307 | MS.gene053007:CDS |
TGTAGCAGACCGTATTGATG+AGG | 0.665500 | 6.2:+1638403 | MS.gene053007:CDS |
TGGGCCAAGAAGTCCAATAG+GGG | 0.667815 | 6.2:+1638003 | MS.gene053007:CDS |
GATTATGCATTGATGACTGG+AGG | 0.668224 | 6.2:+1637925 | MS.gene053007:CDS |
TCCAGGAACAGGGAAGACAA+TGG | 0.668408 | 6.2:+1636014 | MS.gene053007:CDS |
CCAGGGGTATTTCCCTCTGG+AGG | 0.673340 | 6.2:-1635797 | None:intergenic |
GCCATCGGAGAAAGCAACGG+TGG | 0.678000 | 6.2:-1632305 | None:intergenic |
TGATCCGAGAGTCCTCCAGA+GGG | 0.678628 | 6.2:+1635785 | MS.gene053007:CDS |
TTGATCCGAGAGTCCTCCAG+AGG | 0.688066 | 6.2:+1635784 | MS.gene053007:CDS |
AGAGGGGAAACACCAACCGG+CGG | 0.688626 | 6.2:+1631354 | MS.gene053007:CDS |
GAGAAAACGTGCCAGACCAG+GGG | 0.697208 | 6.2:-1635813 | None:intergenic |
GGCAGAAGGTGATTTCATGG+AGG | 0.734958 | 6.2:+1631474 | MS.gene053007:intron |
ATAGCAGCGAGAAACAGAGG+CGG | 0.769755 | 6.2:+1631277 | MS.gene053007:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 1631259 | 1638778 | 1631259 | ID=MS.gene053007 |
chr6.2 | mRNA | 1631259 | 1638778 | 1631259 | ID=MS.gene053007.t1;Parent=MS.gene053007 |
chr6.2 | exon | 1631259 | 1631394 | 1631259 | ID=MS.gene053007.t1.exon1;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1631259 | 1631394 | 1631259 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1631479 | 1631568 | 1631479 | ID=MS.gene053007.t1.exon2;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1631479 | 1631568 | 1631479 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1632284 | 1632477 | 1632284 | ID=MS.gene053007.t1.exon3;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1632284 | 1632477 | 1632284 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1632674 | 1632769 | 1632674 | ID=MS.gene053007.t1.exon4;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1632674 | 1632769 | 1632674 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1634549 | 1634659 | 1634549 | ID=MS.gene053007.t1.exon5;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1634549 | 1634659 | 1634549 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1634745 | 1635054 | 1634745 | ID=MS.gene053007.t1.exon6;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1634745 | 1635054 | 1634745 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1635413 | 1635503 | 1635413 | ID=MS.gene053007.t1.exon7;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1635413 | 1635503 | 1635413 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1635729 | 1636062 | 1635729 | ID=MS.gene053007.t1.exon8;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1635729 | 1636062 | 1635729 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1637919 | 1638067 | 1637919 | ID=MS.gene053007.t1.exon9;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1637919 | 1638067 | 1637919 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
chr6.2 | exon | 1638274 | 1638778 | 1638274 | ID=MS.gene053007.t1.exon10;Parent=MS.gene053007.t1 |
chr6.2 | CDS | 1638274 | 1638778 | 1638274 | ID=cds.MS.gene053007.t1;Parent=MS.gene053007.t1 |
Gene Sequence |
Protein sequence |