Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82938.t1 | XP_013450805.1 | 99.2 | 386 | 3 | 0 | 1 | 386 | 1 | 386 | 5.20E-219 | 770 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82938.t1 | Q9SXP2 | 87.7 | 359 | 44 | 0 | 28 | 386 | 18 | 376 | 1.2e-187 | 657.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82938.t1 | A0A072UGE8 | 99.2 | 386 | 3 | 0 | 1 | 386 | 1 | 386 | 3.7e-219 | 770.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051699 | MS.gene82938 | 0.812792 | 3.55E-51 | -1.69E-46 |
| MS.gene051731 | MS.gene82938 | 0.805711 | 1.17E-49 | -1.69E-46 |
| MS.gene053045 | MS.gene82938 | 0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene053590 | MS.gene82938 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene055841 | MS.gene82938 | 0.808544 | 2.94E-50 | -1.69E-46 |
| MS.gene057392 | MS.gene82938 | 0.861199 | 1.21E-63 | -1.69E-46 |
| MS.gene057694 | MS.gene82938 | 0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene060244 | MS.gene82938 | 0.800491 | 1.41E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82938 | MS.gene034272 | PPI |
| MS.gene98151 | MS.gene82938 | PPI |
| MS.gene034271 | MS.gene82938 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82938.t1 | MTR_6g007170 | 99.223 | 386 | 3 | 0 | 1 | 386 | 1 | 386 | 0.0 | 797 |
| MS.gene82938.t1 | MTR_6g007175 | 86.158 | 354 | 30 | 1 | 33 | 386 | 2 | 336 | 0.0 | 622 |
| MS.gene82938.t1 | MTR_4g005880 | 30.081 | 246 | 168 | 3 | 122 | 367 | 152 | 393 | 4.30e-27 | 113 |
| MS.gene82938.t1 | MTR_1g107480 | 31.600 | 250 | 159 | 5 | 122 | 367 | 119 | 360 | 3.00e-25 | 107 |
| MS.gene82938.t1 | MTR_4g013090 | 27.799 | 259 | 172 | 4 | 113 | 367 | 59 | 306 | 3.21e-24 | 102 |
| MS.gene82938.t1 | MTR_3g005970 | 30.075 | 266 | 154 | 7 | 116 | 360 | 112 | 366 | 1.14e-22 | 98.6 |
| MS.gene82938.t1 | MTR_4g013100 | 25.979 | 281 | 191 | 5 | 91 | 367 | 40 | 307 | 1.42e-21 | 94.4 |
| MS.gene82938.t1 | MTR_8g033390 | 26.641 | 259 | 175 | 4 | 111 | 364 | 65 | 313 | 8.21e-21 | 92.4 |
| MS.gene82938.t1 | MTR_4g012960 | 26.953 | 256 | 175 | 4 | 113 | 367 | 59 | 303 | 1.21e-20 | 91.7 |
| MS.gene82938.t1 | MTR_8g033400 | 26.054 | 261 | 169 | 7 | 111 | 364 | 76 | 319 | 7.56e-18 | 84.0 |
| MS.gene82938.t1 | MTR_8g033410 | 22.712 | 295 | 196 | 9 | 76 | 364 | 44 | 312 | 8.37e-17 | 80.9 |
| MS.gene82938.t1 | MTR_2g101840 | 26.848 | 257 | 178 | 6 | 113 | 367 | 59 | 307 | 3.35e-15 | 76.3 |
| MS.gene82938.t1 | MTR_4g013135 | 29.644 | 253 | 169 | 5 | 116 | 367 | 62 | 306 | 1.65e-13 | 71.2 |
| MS.gene82938.t1 | MTR_1g112510 | 26.809 | 235 | 151 | 6 | 129 | 345 | 94 | 325 | 6.02e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82938.t1 | AT5G14780 | 79.070 | 387 | 77 | 2 | 1 | 386 | 1 | 384 | 0.0 | 604 |
| MS.gene82938.t1 | AT5G14780 | 83.051 | 354 | 60 | 0 | 33 | 386 | 17 | 370 | 0.0 | 600 |
| MS.gene82938.t1 | AT5G14780 | 83.051 | 354 | 60 | 0 | 33 | 386 | 5 | 358 | 0.0 | 600 |
| MS.gene82938.t1 | AT1G17745 | 29.286 | 280 | 189 | 6 | 90 | 367 | 115 | 387 | 2.15e-27 | 114 |
| MS.gene82938.t1 | AT4G34200 | 30.769 | 247 | 165 | 4 | 122 | 367 | 125 | 366 | 5.14e-26 | 110 |
| MS.gene82938.t1 | AT1G17745 | 27.778 | 306 | 187 | 8 | 90 | 367 | 115 | 414 | 2.18e-24 | 105 |
| MS.gene82938.t1 | AT1G72190 | 30.932 | 236 | 154 | 3 | 116 | 345 | 110 | 342 | 2.91e-24 | 103 |
| MS.gene82938.t1 | AT3G19480 | 29.150 | 247 | 169 | 4 | 122 | 367 | 110 | 351 | 6.04e-24 | 103 |
| MS.gene82938.t1 | AT1G79870 | 28.295 | 258 | 176 | 5 | 113 | 369 | 59 | 308 | 9.51e-22 | 95.1 |
| MS.gene82938.t1 | AT1G12550 | 25.564 | 266 | 188 | 5 | 81 | 345 | 36 | 292 | 3.01e-20 | 90.9 |
| MS.gene82938.t1 | AT2G45630 | 27.500 | 240 | 167 | 3 | 109 | 347 | 78 | 311 | 1.54e-19 | 89.4 |
| MS.gene82938.t1 | AT1G79870 | 25.969 | 258 | 163 | 5 | 113 | 369 | 59 | 289 | 7.25e-16 | 77.8 |
Find 96 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACACATCCAACAAAAT+TGG | 0.150781 | 6.2:+2621281 | None:intergenic |
| TATGCTTGAGAGGCACTTTA+AGG | 0.176399 | 6.2:-2619333 | MS.gene82938:CDS |
| CCAATTTCTTTCTCCAATTC+AGG | 0.196911 | 6.2:+2620560 | None:intergenic |
| ATATAAAAGGTTACAGTTAA+AGG | 0.223160 | 6.2:+2620604 | None:intergenic |
| GCTATGACTCCTCATATTTC+TGG | 0.232371 | 6.2:-2619978 | MS.gene82938:CDS |
| CAATGCTCGTGGAGCACTTA+TGG | 0.246792 | 6.2:-2620208 | MS.gene82938:CDS |
| CTCAATGCTGCGGCTGCTGC+TGG | 0.282556 | 6.2:-2620854 | MS.gene82938:CDS |
| TAGCGCCATGGATGATCTTT+TGG | 0.296464 | 6.2:+2620014 | None:intergenic |
| AGTTAAAGGGTTTCAGCCTT+TGG | 0.316924 | 6.2:+2620618 | None:intergenic |
| CCTGAATTGGAGAAAGAAAT+TGG | 0.319944 | 6.2:-2620560 | MS.gene82938:CDS |
| GGTGAAATGGTGTGGATATC+AGG | 0.337349 | 6.2:+2620963 | None:intergenic |
| TTCACAATGTAGTTCTGTTC+AGG | 0.343342 | 6.2:+2619299 | None:intergenic |
| ACTTAAGATGGCGCCTGAAT+TGG | 0.345074 | 6.2:-2620573 | MS.gene82938:CDS |
| TAAGTCTATCGTGATATAAA+AGG | 0.348710 | 6.2:+2620591 | None:intergenic |
| ACGGTCGGTGCTGGACGAAT+TGG | 0.352979 | 6.2:-2620653 | MS.gene82938:CDS |
| GACAAAGAAGGACTCAATTC+TGG | 0.356342 | 6.2:-2621198 | MS.gene82938:intron |
| TATAAAAGGTTACAGTTAAA+GGG | 0.356684 | 6.2:+2620605 | None:intergenic |
| TGTTCTAGTGGACACGTTGC+AGG | 0.363087 | 6.2:-2620162 | MS.gene82938:intron |
| GATACTACATTCACCGGTAT+TGG | 0.372695 | 6.2:+2619258 | None:intergenic |
| TAGGTTACAGTGGTGATGTT+TGG | 0.375068 | 6.2:-2620052 | MS.gene82938:CDS |
| TCAACACATCCAACAAAATT+GGG | 0.405718 | 6.2:+2621282 | None:intergenic |
| CATTGTGAAGGAGGGTCAAT+TGG | 0.409097 | 6.2:-2619285 | MS.gene82938:CDS |
| TGTCTTTCCTTCAAGATCAT+AGG | 0.421953 | 6.2:+2620682 | None:intergenic |
| ACCGGAGAATGGAATGTTGC+TGG | 0.422186 | 6.2:-2620719 | MS.gene82938:CDS |
| TCCAACAAAATTGGGATTCA+AGG | 0.426930 | 6.2:+2621290 | None:intergenic |
| CGGTCGGTGCTGGACGAATT+GGG | 0.430059 | 6.2:-2620652 | MS.gene82938:CDS |
| ATAAACTACCTGTGCATCAA+TGG | 0.432079 | 6.2:+2619950 | None:intergenic |
| GGTTACCATCAGGCTATTAC+CGG | 0.432378 | 6.2:-2620737 | MS.gene82938:CDS |
| CACCTTCTTCCATCATCACC+AGG | 0.440843 | 6.2:-2623145 | MS.gene82938:CDS |
| CTGCTTCTAACCGCCGGCAT+TGG | 0.441881 | 6.2:-2620893 | MS.gene82938:CDS |
| CATAGAGCCTATGATCTTGA+AGG | 0.442532 | 6.2:-2620689 | MS.gene82938:CDS |
| GGATGTGTTGAAGGAGCATT+AGG | 0.450524 | 6.2:-2621270 | MS.gene82938:CDS |
| ATGCTTGAGAGGCACTTTAA+GGG | 0.454740 | 6.2:-2619332 | MS.gene82938:CDS |
| TGAGGAGTCATAGCATGATT+AGG | 0.459588 | 6.2:+2619987 | None:intergenic |
| CTTGTGAGGAATTTCTTGCC+TGG | 0.460979 | 6.2:-2620758 | MS.gene82938:CDS |
| GGTGGAAAGAAGAAGATTGT+AGG | 0.462288 | 6.2:-2621342 | MS.gene82938:CDS |
| CTTTCCGCAGTGACATAGGC+AGG | 0.464618 | 6.2:+2620941 | None:intergenic |
| TGTTGTTGAGAATAGGCCTC+TGG | 0.466148 | 6.2:-2621363 | MS.gene82938:intron |
| CTTTGAAGAAGCAGTGATCA+AGG | 0.467599 | 6.2:+2623184 | None:intergenic |
| ACAGTTGGAACGGTCGGTGC+TGG | 0.468606 | 6.2:-2620662 | MS.gene82938:CDS |
| ATATCACGATAGACTTAAGA+TGG | 0.470085 | 6.2:-2620585 | MS.gene82938:CDS |
| GTGACATAGGCAGGGTGAAA+TGG | 0.470645 | 6.2:+2620950 | None:intergenic |
| TTTCTTGCCTGGTTACCATC+AGG | 0.472008 | 6.2:-2620747 | MS.gene82938:CDS |
| ATGAAGGTCCCTGGTGATGA+TGG | 0.493616 | 6.2:+2623136 | None:intergenic |
| ATCAGGCTATTACCGGAGAA+TGG | 0.493947 | 6.2:-2620730 | MS.gene82938:CDS |
| GCCAGCAACATTCCATTCTC+CGG | 0.495643 | 6.2:+2620718 | None:intergenic |
| GTCAATTGGCAAGCCAATAC+CGG | 0.498456 | 6.2:-2619271 | MS.gene82938:CDS |
| ATTGCTGATGCTTGTTCTAG+TGG | 0.505145 | 6.2:-2620174 | MS.gene82938:CDS |
| AGAATTGCTAAGTTGAAGAA+AGG | 0.514648 | 6.2:-2620246 | MS.gene82938:CDS |
| AGAAATTGGAGCTCAGTTTG+AGG | 0.516756 | 6.2:-2620546 | MS.gene82938:CDS |
| AATTCTTTCCGCAGTGACAT+AGG | 0.516858 | 6.2:+2620937 | None:intergenic |
| GATATCAGGACATTGAGATC+AGG | 0.531388 | 6.2:+2620977 | None:intergenic |
| GTTCAGTTACGTTATGCTGC+TGG | 0.533638 | 6.2:-2619365 | MS.gene82938:intron |
| TGGAACCACCATTGATGCAC+AGG | 0.536965 | 6.2:-2619958 | MS.gene82938:intron |
| TTAGAGCTGCTTCTAACCGC+CGG | 0.540077 | 6.2:-2620899 | MS.gene82938:CDS |
| TTAACTGTCGCAGAGGTCAC+AGG | 0.552581 | 6.2:-2620830 | MS.gene82938:CDS |
| GATCTTGAAGGAAAGACAGT+TGG | 0.556559 | 6.2:-2620677 | MS.gene82938:CDS |
| AATGTGATCAGAACCAATGC+CGG | 0.563596 | 6.2:+2620880 | None:intergenic |
| ATTAGGTATACGCGAGTGGT+TGG | 0.567034 | 6.2:-2621253 | MS.gene82938:CDS |
| CAGCTCCAAAAGATCATCCA+TGG | 0.568481 | 6.2:-2620019 | MS.gene82938:CDS |
| TGAGCTTACATGAAGGTCCC+TGG | 0.575307 | 6.2:+2623127 | None:intergenic |
| TACCTTGTCTTATCAGTGAG+AGG | 0.576761 | 6.2:+2620473 | None:intergenic |
| ATTGTCACTGATGACAAAGA+AGG | 0.582437 | 6.2:-2621210 | MS.gene82938:CDS |
| GGAAAGACAGTTGGAACGGT+CGG | 0.583686 | 6.2:-2620668 | MS.gene82938:CDS |
| GTAATAGCCTGATGGTAACC+AGG | 0.591423 | 6.2:+2620740 | None:intergenic |
| TGAGAATTCTCATTCTTGTG+AGG | 0.592186 | 6.2:-2620772 | MS.gene82938:CDS |
| AATCTTCTTCTTTCCACCAG+AGG | 0.597365 | 6.2:+2621347 | None:intergenic |
| ACAGAACTACATTGTGAAGG+AGG | 0.610756 | 6.2:-2619294 | MS.gene82938:CDS |
| TGATTAGGCATGTAGCGCCA+TGG | 0.614868 | 6.2:+2620002 | None:intergenic |
| CAACACTGTGTCGGTTGCTG+AGG | 0.618658 | 6.2:-2620804 | MS.gene82938:CDS |
| CGCGAGTGGTTGGAATCACA+AGG | 0.620030 | 6.2:-2621243 | MS.gene82938:CDS |
| GAGTCAAAGATATGCTTGAG+AGG | 0.624367 | 6.2:-2619343 | MS.gene82938:CDS |
| AACTACCTGTGCATCAATGG+TGG | 0.632641 | 6.2:+2619953 | None:intergenic |
| ATTGTAGGTGTGTTCTACAA+AGG | 0.635031 | 6.2:-2621327 | MS.gene82938:CDS |
| CACAGGAAGCAACACTGTGT+CGG | 0.636460 | 6.2:-2620813 | MS.gene82938:CDS |
| TTTCCGCAGTGACATAGGCA+GGG | 0.641235 | 6.2:+2620942 | None:intergenic |
| TTGATTGTCAACAATGCTCG+TGG | 0.642232 | 6.2:-2620219 | MS.gene82938:CDS |
| AATTGGAGCTCAGTTTGAGG+AGG | 0.645215 | 6.2:-2620543 | MS.gene82938:CDS |
| TGTTGAGAATAGGCCTCTGG+TGG | 0.646139 | 6.2:-2621360 | MS.gene82938:intron |
| CAGAACTACATTGTGAAGGA+GGG | 0.646841 | 6.2:-2619293 | MS.gene82938:CDS |
| ATTCTCCGGTAATAGCCTGA+TGG | 0.648132 | 6.2:+2620732 | None:intergenic |
| TCCCTGGTGATGATGGAAGA+AGG | 0.649337 | 6.2:+2623143 | None:intergenic |
| TGAACAGAACTACATTGTGA+AGG | 0.650943 | 6.2:-2619297 | MS.gene82938:CDS |
| TGAAGGAAAGACAGTTGGAA+CGG | 0.651639 | 6.2:-2620672 | MS.gene82938:CDS |
| ACCTTCTTCCATCATCACCA+GGG | 0.652169 | 6.2:-2623144 | MS.gene82938:CDS |
| ATAACAATAATGTCGCACTT+CGG | 0.654035 | 6.2:+2620503 | None:intergenic |
| ATAGGCAGGGTGAAATGGTG+TGG | 0.663821 | 6.2:+2620955 | None:intergenic |
| GAGCATTAGGTATACGCGAG+TGG | 0.665851 | 6.2:-2621257 | MS.gene82938:CDS |
| TCACATTGATCTCAATGCTG+CGG | 0.666935 | 6.2:-2620864 | MS.gene82938:CDS |
| TGCTGGTTTAACTGTCGCAG+AGG | 0.668788 | 6.2:-2620837 | MS.gene82938:CDS |
| GTTTCATCTATAGGTTACAG+TGG | 0.672760 | 6.2:-2620062 | MS.gene82938:intron |
| TGCCTCTCACTGATAAGACA+AGG | 0.678138 | 6.2:-2620475 | MS.gene82938:intron |
| GTAGGTGTGTTCTACAAAGG+CGG | 0.684274 | 6.2:-2621324 | MS.gene82938:CDS |
| ATGGTGGTTCCAGAAATATG+AGG | 0.685776 | 6.2:+2619969 | None:intergenic |
| GTGATCAGAACCAATGCCGG+CGG | 0.702688 | 6.2:+2620883 | None:intergenic |
| TCACCCTGCCTATGTCACTG+CGG | 0.753926 | 6.2:-2620945 | MS.gene82938:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTTTATTATTTT+TGG | + | chr6.2:2619483-2619502 | None:intergenic | 0.0% |
| !! | CAAAAAAAAAAAAAAAAAGT+AGG | + | chr6.2:2620454-2620473 | None:intergenic | 10.0% |
| !! | GAATAATTTACTATAATAAA+TGG | + | chr6.2:2620735-2620754 | None:intergenic | 10.0% |
| !! | GATTGAAACTAAAATAAATA+CGG | - | chr6.2:2622923-2622942 | MS.gene82938:intron | 15.0% |
| !!! | TAAATTTTAAAAGTAATGCA+CGG | + | chr6.2:2620043-2620062 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTTAGTCATTTT+AGG | + | chr6.2:2620953-2620972 | None:intergenic | 15.0% |
| !!! | TACGATTTTAAACATTTTTT+CGG | - | chr6.2:2621370-2621389 | MS.gene82938:intron | 15.0% |
| !!! | TTCATATCTAATTTTTTGTT+GGG | - | chr6.2:2620663-2620682 | MS.gene82938:CDS | 15.0% |
| !! | AATAATGCATAATATATGCA+AGG | + | chr6.2:2619844-2619863 | None:intergenic | 20.0% |
| !! | ATATAAAAGGTTACAGTTAA+AGG | + | chr6.2:2621876-2621895 | None:intergenic | 20.0% |
| !! | ATTCAAAGACTAAAATTGAT+CGG | - | chr6.2:2620900-2620919 | MS.gene82938:CDS | 20.0% |
| !! | CAAACTAGAAATTAAGATAA+AGG | + | chr6.2:2622574-2622593 | None:intergenic | 20.0% |
| !! | CAACAAAAAATTAGATATGA+AGG | + | chr6.2:2620664-2620683 | None:intergenic | 20.0% |
| !! | CATATATTCAGATATCAAAA+TGG | - | chr6.2:2621019-2621038 | MS.gene82938:intron | 20.0% |
| !! | CTTAATTTCATTCAATCATT+TGG | - | chr6.2:2619387-2619406 | MS.gene82938:intron | 20.0% |
| !! | GAAATCAAACAATTGTTAAT+TGG | - | chr6.2:2620590-2620609 | MS.gene82938:CDS | 20.0% |
| !! | TAGACCTTATGTTTAATTAA+GGG | - | chr6.2:2619929-2619948 | MS.gene82938:intron | 20.0% |
| !! | TATAAAAGGTTACAGTTAAA+GGG | + | chr6.2:2621875-2621894 | None:intergenic | 20.0% |
| !! | TTAGACCTTATGTTTAATTA+AGG | - | chr6.2:2619928-2619947 | MS.gene82938:intron | 20.0% |
| !!! | AACAATTGTTTGATTTCATT+GGG | + | chr6.2:2620587-2620606 | None:intergenic | 20.0% |
| !!! | ACTTTATGGATTAAATTGAT+CGG | - | chr6.2:2620867-2620886 | MS.gene82938:CDS | 20.0% |
| !!! | ATAATTTTGAGGAAAACTAT+AGG | - | chr6.2:2622660-2622679 | MS.gene82938:intron | 20.0% |
| !!! | CTTCATATCTAATTTTTTGT+TGG | - | chr6.2:2620662-2620681 | MS.gene82938:CDS | 20.0% |
| !!! | CTTTTAAAAATGAGTCTTAA+CGG | - | chr6.2:2619766-2619785 | MS.gene82938:intron | 20.0% |
| !!! | TAACAATTGTTTGATTTCAT+TGG | + | chr6.2:2620588-2620607 | None:intergenic | 20.0% |
| !!! | TAATTTTGAGGAAAACTATA+GGG | - | chr6.2:2622661-2622680 | MS.gene82938:intron | 20.0% |
| !!! | TACATGATATTTAACTTCAT+TGG | + | chr6.2:2620552-2620571 | None:intergenic | 20.0% |
| ! | ATAGCCCTTAATTAAACATA+AGG | + | chr6.2:2619936-2619955 | None:intergenic | 25.0% |
| ! | ATTCCAATATCAAAATGACT+TGG | - | chr6.2:2622104-2622123 | MS.gene82938:intron | 25.0% |
| ! | GAAAAGAGAGAAAGAATTTA+AGG | + | chr6.2:2622604-2622623 | None:intergenic | 25.0% |
| ! | TAAGTCTATCGTGATATAAA+AGG | + | chr6.2:2621889-2621908 | None:intergenic | 25.0% |
| ! | TTCAAAGACTAAAATTGATC+GGG | - | chr6.2:2620901-2620920 | MS.gene82938:CDS | 25.0% |
| !! | CTTTATGGATTAAATTGATC+GGG | - | chr6.2:2620868-2620887 | MS.gene82938:CDS | 25.0% |
| !! | GCTCTTAAATGATAATTTTG+AGG | - | chr6.2:2622649-2622668 | MS.gene82938:intron | 25.0% |
| !! | TATATACATGCTGATTACAT+GGG | - | chr6.2:2619953-2619972 | MS.gene82938:intron | 25.0% |
| !! | TTAAATGTGTGAAGCATTAT+CGG | - | chr6.2:2620814-2620833 | MS.gene82938:CDS | 25.0% |
| !! | TTGAAATCTGAAGTCTATAA+GGG | - | chr6.2:2622071-2622090 | MS.gene82938:intron | 25.0% |
| !! | TTTTTCTTTTTGTGATTCAG+AGG | - | chr6.2:2622192-2622211 | MS.gene82938:intron | 25.0% |
| !!! | AAACCAAGTCATTTTGATAT+TGG | + | chr6.2:2622110-2622129 | None:intergenic | 25.0% |
| !!! | AAGGTTTTAGATTTAAACTC+CGG | + | chr6.2:2619825-2619844 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTGGGAAAAATC+TGG | - | chr6.2:2620673-2620692 | MS.gene82938:CDS | 25.0% |
| !!! | CGTTAAGACTCATTTTTAAA+AGG | + | chr6.2:2619768-2619787 | None:intergenic | 25.0% |
| !!! | CTCTTTTGTTTGTAACTTTA+TGG | - | chr6.2:2620853-2620872 | MS.gene82938:CDS | 25.0% |
| !!! | CTTGTCTAGAACTAAATTTT+TGG | - | chr6.2:2620493-2620512 | MS.gene82938:CDS | 25.0% |
| !!! | TCAAATGATTAGCTTTTACA+GGG | - | chr6.2:2620350-2620369 | MS.gene82938:intron | 25.0% |
| !!! | TTCAAATGATTAGCTTTTAC+AGG | - | chr6.2:2620349-2620368 | MS.gene82938:intron | 25.0% |
| AAAAGATTGAGCTTACATGA+AGG | + | chr6.2:2619360-2619379 | None:intergenic | 30.0% | |
| AAACTATAGGGTCATATACT+AGG | - | chr6.2:2622673-2622692 | MS.gene82938:intron | 30.0% | |
| AAGAAGTTAACCAAAGAACA+AGG | + | chr6.2:2623038-2623057 | None:intergenic | 30.0% | |
| AGAAGTTAACCAAAGAACAA+GGG | + | chr6.2:2623037-2623056 | None:intergenic | 30.0% | |
| ATAACAATAATGTCGCACTT+CGG | + | chr6.2:2621977-2621996 | None:intergenic | 30.0% | |
| ATATCACGATAGACTTAAGA+TGG | - | chr6.2:2621892-2621911 | MS.gene82938:intron | 30.0% | |
| ATTTCATTGGGTGAAAAAAC+TGG | + | chr6.2:2620575-2620594 | None:intergenic | 30.0% | |
| CGTTAAACTGGTTAAGATAA+AGG | - | chr6.2:2622956-2622975 | MS.gene82938:intron | 30.0% | |
| GAAATGTTAGATGAAACTGA+CGG | + | chr6.2:2620627-2620646 | None:intergenic | 30.0% | |
| TAAGAACTCAAAAGAAGCTT+TGG | - | chr6.2:2619505-2619524 | MS.gene82938:intron | 30.0% | |
| TCAACACATCCAACAAAATT+GGG | + | chr6.2:2621198-2621217 | None:intergenic | 30.0% | |
| TTAAAAATGAGTCTTAACGG+TGG | - | chr6.2:2619769-2619788 | MS.gene82938:intron | 30.0% | |
| TTCAACACATCCAACAAAAT+TGG | + | chr6.2:2621199-2621218 | None:intergenic | 30.0% | |
| TTCTTTCTGTTGTTGAGAAT+AGG | - | chr6.2:2621107-2621126 | MS.gene82938:intron | 30.0% | |
| ! | AATTTTGTTGGATGTGTTGA+AGG | - | chr6.2:2621198-2621217 | MS.gene82938:intron | 30.0% |
| ! | AGAATTGCTAAGTTGAAGAA+AGG | - | chr6.2:2622231-2622250 | MS.gene82938:intron | 30.0% |
| ! | CTATATACATGCTGATTACA+TGG | - | chr6.2:2619952-2619971 | MS.gene82938:intron | 30.0% |
| ! | CTTGAAATCTGAAGTCTATA+AGG | - | chr6.2:2622070-2622089 | MS.gene82938:intron | 30.0% |
| ! | GTCTAGAACATTAACAATGT+TGG | + | chr6.2:2622891-2622910 | None:intergenic | 30.0% |
| !! | AATAAGAGGGTGGATTAATT+TGG | + | chr6.2:2621316-2621335 | None:intergenic | 30.0% |
| !!! | CAAATGATTAGCTTTTACAG+GGG | - | chr6.2:2620351-2620370 | MS.gene82938:intron | 30.0% |
| !!! | GGCATTCTAAAACAGTTTTT+TGG | + | chr6.2:2622870-2622889 | None:intergenic | 30.0% |
| AACACCTGAGTTTCATCTAT+AGG | - | chr6.2:2622406-2622425 | MS.gene82938:intron | 35.0% | |
| AATGAGAGAGTGAGTGTTAT+TGG | - | chr6.2:2619892-2619911 | MS.gene82938:intron | 35.0% | |
| ACAAACAAGGACACAAACAA+TGG | + | chr6.2:2622784-2622803 | None:intergenic | 35.0% | |
| ACAAGCATACATAAGAGACA+AGG | + | chr6.2:2621052-2621071 | None:intergenic | 35.0% | |
| ATAAACTACCTGTGCATCAA+TGG | + | chr6.2:2622530-2622549 | None:intergenic | 35.0% | |
| ATCAAATGGCCTATAATTGC+AGG | - | chr6.2:2620409-2620428 | MS.gene82938:intron | 35.0% | |
| ATGAGTGATTAACTCTGATG+AGG | - | chr6.2:2620318-2620337 | MS.gene82938:intron | 35.0% | |
| ATTGTAGGTGTGTTCTACAA+AGG | - | chr6.2:2621150-2621169 | MS.gene82938:intron | 35.0% | |
| ATTGTCACTGATGACAAAGA+AGG | - | chr6.2:2621267-2621286 | MS.gene82938:CDS | 35.0% | |
| CATTTCATCCCTGCAATTAT+AGG | + | chr6.2:2620421-2620440 | None:intergenic | 35.0% | |
| CCAATTTCTTTCTCCAATTC+AGG | + | chr6.2:2621920-2621939 | None:intergenic | 35.0% | |
| CCTGAATTGGAGAAAGAAAT+TGG | - | chr6.2:2621917-2621936 | MS.gene82938:intron | 35.0% | |
| CTCAGGGATGAAAAATCAAA+TGG | - | chr6.2:2620395-2620414 | MS.gene82938:intron | 35.0% | |
| GGAAATGAGTAACGTTAAAC+TGG | - | chr6.2:2622944-2622963 | MS.gene82938:intron | 35.0% | |
| GTAACCTATAGATGAAACTC+AGG | + | chr6.2:2622413-2622432 | None:intergenic | 35.0% | |
| GTATCTATGAAGCACAAACA+AGG | + | chr6.2:2622797-2622816 | None:intergenic | 35.0% | |
| GTTTCATCTATAGGTTACAG+TGG | - | chr6.2:2622415-2622434 | MS.gene82938:intron | 35.0% | |
| TCAAATGGCCTATAATTGCA+GGG | - | chr6.2:2620410-2620429 | MS.gene82938:intron | 35.0% | |
| TCCAACAAAATTGGGATTCA+AGG | + | chr6.2:2621190-2621209 | None:intergenic | 35.0% | |
| TGAACAGAACTACATTGTGA+AGG | - | chr6.2:2623180-2623199 | MS.gene82938:CDS | 35.0% | |
| TGAGAATTCTCATTCTTGTG+AGG | - | chr6.2:2621705-2621724 | MS.gene82938:intron | 35.0% | |
| TGAGTGATTAACTCTGATGA+GGG | - | chr6.2:2620319-2620338 | MS.gene82938:intron | 35.0% | |
| TGTCTTTCCTTCAAGATCAT+AGG | + | chr6.2:2621798-2621817 | None:intergenic | 35.0% | |
| TGTTTAACTGGAGCAACTAA+GGG | + | chr6.2:2620238-2620257 | None:intergenic | 35.0% | |
| TTGCTCCAGTTAAACAGAAA+AGG | - | chr6.2:2620242-2620261 | MS.gene82938:CDS | 35.0% | |
| ! | GAAACACATTTTATGTCAGC+TGG | + | chr6.2:2622352-2622371 | None:intergenic | 35.0% |
| ! | TCCTTGAATCCCAATTTTGT+TGG | - | chr6.2:2621186-2621205 | MS.gene82938:intron | 35.0% |
| ! | TTCACAATGTAGTTCTGTTC+AGG | + | chr6.2:2623181-2623200 | None:intergenic | 35.0% |
| ! | TTGGGAAACTTTTACTCCAA+AGG | - | chr6.2:2621843-2621862 | MS.gene82938:intron | 35.0% |
| ! | TTGGTCCTTTTCTGTTTAAC+TGG | + | chr6.2:2620250-2620269 | None:intergenic | 35.0% |
| !! | AAAATGCCCTTAGTTGATGA+AGG | + | chr6.2:2620281-2620300 | None:intergenic | 35.0% |
| !!! | TTCATCAACTAAGGGCATTT+TGG | - | chr6.2:2620280-2620299 | MS.gene82938:intron | 35.0% |
| AACCAAAGAACAAGGGACAA+GGG | + | chr6.2:2623030-2623049 | None:intergenic | 40.0% | |
| AATCTTCTTCTTTCCACCAG+AGG | + | chr6.2:2621133-2621152 | None:intergenic | 40.0% | |
| AATGTGATCAGAACCAATGC+CGG | + | chr6.2:2621600-2621619 | None:intergenic | 40.0% | |
| AATTCTTTCCGCAGTGACAT+AGG | + | chr6.2:2621543-2621562 | None:intergenic | 40.0% | |
| ACAGAACTACATTGTGAAGG+AGG | - | chr6.2:2623183-2623202 | MS.gene82938:CDS | 40.0% | |
| ACGGCATAGACGTAATAAGA+GGG | + | chr6.2:2621329-2621348 | None:intergenic | 40.0% | |
| AGAAATTGGAGCTCAGTTTG+AGG | - | chr6.2:2621931-2621950 | MS.gene82938:intron | 40.0% | |
| AGATCCACTATAAAGCTTGG+TGG | + | chr6.2:2620710-2620729 | None:intergenic | 40.0% | |
| AGTTAAAGGGTTTCAGCCTT+TGG | + | chr6.2:2621862-2621881 | None:intergenic | 40.0% | |
| ATACCCTCCTTCATCAACTA+AGG | - | chr6.2:2620271-2620290 | MS.gene82938:intron | 40.0% | |
| ATGGTAACACTGACACATGT+TGG | + | chr6.2:2622765-2622784 | None:intergenic | 40.0% | |
| ATGGTGGTTCCAGAAATATG+AGG | + | chr6.2:2622511-2622530 | None:intergenic | 40.0% | |
| ATTGCTGATGCTTGTTCTAG+TGG | - | chr6.2:2622303-2622322 | MS.gene82938:intron | 40.0% | |
| CAGAACTACATTGTGAAGGA+GGG | - | chr6.2:2623184-2623203 | MS.gene82938:CDS | 40.0% | |
| CATAGAGCCTATGATCTTGA+AGG | - | chr6.2:2621788-2621807 | MS.gene82938:intron | 40.0% | |
| CTGTTTAACTGGAGCAACTA+AGG | + | chr6.2:2620239-2620258 | None:intergenic | 40.0% | |
| GACAAAGAAGGACTCAATTC+TGG | - | chr6.2:2621279-2621298 | MS.gene82938:CDS | 40.0% | |
| GAGTCAAAGATATGCTTGAG+AGG | - | chr6.2:2623134-2623153 | MS.gene82938:intron | 40.0% | |
| GATATCAGGACATTGAGATC+AGG | + | chr6.2:2621503-2621522 | None:intergenic | 40.0% | |
| GATCCACTATAAAGCTTGGT+GGG | + | chr6.2:2620709-2620728 | None:intergenic | 40.0% | |
| GATCTTGAAGGAAAGACAGT+TGG | - | chr6.2:2621800-2621819 | MS.gene82938:intron | 40.0% | |
| GCTATGACTCCTCATATTTC+TGG | - | chr6.2:2622499-2622518 | MS.gene82938:intron | 40.0% | |
| GGTGGAAAGAAGAAGATTGT+AGG | - | chr6.2:2621135-2621154 | MS.gene82938:intron | 40.0% | |
| TAACCAAAGAACAAGGGACA+AGG | + | chr6.2:2623031-2623050 | None:intergenic | 40.0% | |
| TACCCTCCTTCATCAACTAA+GGG | - | chr6.2:2620272-2620291 | MS.gene82938:intron | 40.0% | |
| TACCTTGTCTTATCAGTGAG+AGG | + | chr6.2:2622007-2622026 | None:intergenic | 40.0% | |
| TACGGCATAGACGTAATAAG+AGG | + | chr6.2:2621330-2621349 | None:intergenic | 40.0% | |
| TCACATTGATCTCAATGCTG+CGG | - | chr6.2:2621613-2621632 | MS.gene82938:intron | 40.0% | |
| TGAAGGAAAGACAGTTGGAA+CGG | - | chr6.2:2621805-2621824 | MS.gene82938:intron | 40.0% | |
| TGACTACTGATGGAGACAAA+GGG | + | chr6.2:2619616-2619635 | None:intergenic | 40.0% | |
| TGAGGAGTCATAGCATGATT+AGG | + | chr6.2:2622493-2622512 | None:intergenic | 40.0% | |
| TTGACTACTGATGGAGACAA+AGG | + | chr6.2:2619617-2619636 | None:intergenic | 40.0% | |
| TTGATTGTCAACAATGCTCG+TGG | - | chr6.2:2622258-2622277 | MS.gene82938:intron | 40.0% | |
| ! | AAAGAAGCTTTGGTGTGATC+TGG | - | chr6.2:2619515-2619534 | MS.gene82938:intron | 40.0% |
| ! | AGCTTTTACAGGGGCAAAAT+GGG | - | chr6.2:2620360-2620379 | MS.gene82938:intron | 40.0% |
| ! | CTTTGAAGAAGCAGTGATCA+AGG | + | chr6.2:2619296-2619315 | None:intergenic | 40.0% |
| ! | TAGCTTTTACAGGGGCAAAA+TGG | - | chr6.2:2620359-2620378 | MS.gene82938:intron | 40.0% |
| ! | TAGGTTACAGTGGTGATGTT+TGG | - | chr6.2:2622425-2622444 | MS.gene82938:intron | 40.0% |
| !! | ATGCTTGAGAGGCACTTTAA+GGG | - | chr6.2:2623145-2623164 | MS.gene82938:CDS | 40.0% |
| !! | TATGCTTGAGAGGCACTTTA+AGG | - | chr6.2:2623144-2623163 | MS.gene82938:CDS | 40.0% |
| !! | TGACAAGTGTTGACTACTGA+TGG | + | chr6.2:2619626-2619645 | None:intergenic | 40.0% |
| !!! | GTGAGTGTTTTTTTCTGTGC+CGG | - | chr6.2:2619803-2619822 | MS.gene82938:intron | 40.0% |
| !!! | GTTGATGAAGGAGGGTATTT+TGG | + | chr6.2:2620269-2620288 | None:intergenic | 40.0% |
| AACTACCTGTGCATCAATGG+TGG | + | chr6.2:2622527-2622546 | None:intergenic | 45.0% | |
| AATTGGAGCTCAGTTTGAGG+AGG | - | chr6.2:2621934-2621953 | MS.gene82938:intron | 45.0% | |
| ACCTTCTTCCATCATCACCA+GGG | - | chr6.2:2619333-2619352 | MS.gene82938:CDS | 45.0% | |
| ACTTAAGATGGCGCCTGAAT+TGG | - | chr6.2:2621904-2621923 | MS.gene82938:intron | 45.0% | |
| AGAGCATACATGCAAGTGTG+AGG | + | chr6.2:2622634-2622653 | None:intergenic | 45.0% | |
| ATCAGGCTATTACCGGAGAA+TGG | - | chr6.2:2621747-2621766 | MS.gene82938:intron | 45.0% | |
| ATTAGGTATACGCGAGTGGT+TGG | - | chr6.2:2621224-2621243 | MS.gene82938:CDS | 45.0% | |
| ATTCTCCGGTAATAGCCTGA+TGG | + | chr6.2:2621748-2621767 | None:intergenic | 45.0% | |
| CAGCTCCAAAAGATCATCCA+TGG | - | chr6.2:2622458-2622477 | MS.gene82938:intron | 45.0% | |
| CATTGTGAAGGAGGGTCAAT+TGG | - | chr6.2:2623192-2623211 | MS.gene82938:CDS | 45.0% | |
| CTTGTGAGGAATTTCTTGCC+TGG | - | chr6.2:2621719-2621738 | MS.gene82938:intron | 45.0% | |
| GCATAGACGTAATAAGAGGG+TGG | + | chr6.2:2621326-2621345 | None:intergenic | 45.0% | |
| GGCAGATCCACTATAAAGCT+TGG | + | chr6.2:2620713-2620732 | None:intergenic | 45.0% | |
| GGTGAAATGGTGTGGATATC+AGG | + | chr6.2:2621517-2621536 | None:intergenic | 45.0% | |
| GGTTACCATCAGGCTATTAC+CGG | - | chr6.2:2621740-2621759 | MS.gene82938:intron | 45.0% | |
| GTAATAGCCTGATGGTAACC+AGG | + | chr6.2:2621740-2621759 | None:intergenic | 45.0% | |
| GTAGGTGTGTTCTACAAAGG+CGG | - | chr6.2:2621153-2621172 | MS.gene82938:intron | 45.0% | |
| GTCAATTGGCAAGCCAATAC+CGG | - | chr6.2:2623206-2623225 | MS.gene82938:CDS | 45.0% | |
| GTTCAGTTACGTTATGCTGC+TGG | - | chr6.2:2623112-2623131 | MS.gene82938:intron | 45.0% | |
| TACCCTTGTCCCTTGTTCTT+TGG | - | chr6.2:2623025-2623044 | MS.gene82938:intron | 45.0% | |
| TGCCTCTCACTGATAAGACA+AGG | - | chr6.2:2622002-2622021 | MS.gene82938:intron | 45.0% | |
| TGTTGGACATTCACACGTGT+CGG | + | chr6.2:2622748-2622767 | None:intergenic | 45.0% | |
| TGTTGTTGAGAATAGGCCTC+TGG | - | chr6.2:2621114-2621133 | MS.gene82938:intron | 45.0% | |
| TTTCTTGCCTGGTTACCATC+AGG | - | chr6.2:2621730-2621749 | MS.gene82938:intron | 45.0% | |
| ! | ACGCCTACAATCTGAAGTGT+CGG | + | chr6.2:2622723-2622742 | None:intergenic | 45.0% |
| ! | ATGGGAGGATTAGTAAGCTC+AGG | - | chr6.2:2620378-2620397 | MS.gene82938:intron | 45.0% |
| ! | TAGCGCCATGGATGATCTTT+TGG | + | chr6.2:2622466-2622485 | None:intergenic | 45.0% |
| ! | TGGGAGGATTAGTAAGCTCA+GGG | - | chr6.2:2620379-2620398 | MS.gene82938:intron | 45.0% |
| ! | TTGCCCACCAAGCTTTATAG+TGG | - | chr6.2:2620703-2620722 | MS.gene82938:CDS | 45.0% |
| ! | TTTTACAGGGGCAAAATGGG+AGG | - | chr6.2:2620363-2620382 | MS.gene82938:intron | 45.0% |
| !! | ATGCCCTTAGTTGATGAAGG+AGG | + | chr6.2:2620278-2620297 | None:intergenic | 45.0% |
| !! | GGATGTGTTGAAGGAGCATT+AGG | - | chr6.2:2621207-2621226 | MS.gene82938:CDS | 45.0% |
| !! | TGCCCTTAGTTGATGAAGGA+GGG | + | chr6.2:2620277-2620296 | None:intergenic | 45.0% |
| !!! | CATGGATGATCTTTTGGAGC+TGG | + | chr6.2:2622460-2622479 | None:intergenic | 45.0% |
| !!! | GATCTTTTGGAGCTGGTTGT+GGG | + | chr6.2:2622453-2622472 | None:intergenic | 45.0% |
| !!! | TGATCTTTTGGAGCTGGTTG+TGG | + | chr6.2:2622454-2622473 | None:intergenic | 45.0% |
| !!! | TGGAGCAACTAAGGGCATTT+TGG | + | chr6.2:2620230-2620249 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAAAGTA+GGG | + | chr6.2:2620453-2620472 | None:intergenic | 5.0% |
| !! | AATAATTTACTATAATAAAT+GGG | + | chr6.2:2620734-2620753 | None:intergenic | 5.0% |
| !!! | TATATATATTAGTTTAATTA+CGG | + | chr6.2:2621348-2621367 | None:intergenic | 5.0% |
| ACCGGAGAATGGAATGTTGC+TGG | - | chr6.2:2621758-2621777 | MS.gene82938:intron | 50.0% | |
| ACGCATGAATACACAACGCG+TGG | + | chr6.2:2622158-2622177 | None:intergenic | 50.0% | |
| ATAGGCAGGGTGAAATGGTG+TGG | + | chr6.2:2621525-2621544 | None:intergenic | 50.0% | |
| CACAGGAAGCAACACTGTGT+CGG | - | chr6.2:2621664-2621683 | MS.gene82938:intron | 50.0% | |
| CACCTTCTTCCATCATCACC+AGG | - | chr6.2:2619332-2619351 | MS.gene82938:CDS | 50.0% | |
| CTACTGATGGAGACAAAGGG+TGG | + | chr6.2:2619613-2619632 | None:intergenic | 50.0% | |
| CTGACATCGCGTGAATGTCA+CGG | + | chr6.2:2619586-2619605 | None:intergenic | 50.0% | |
| GAGCATTAGGTATACGCGAG+TGG | - | chr6.2:2621220-2621239 | MS.gene82938:CDS | 50.0% | |
| GCCAGCAACATTCCATTCTC+CGG | + | chr6.2:2621762-2621781 | None:intergenic | 50.0% | |
| GGAAAGACAGTTGGAACGGT+CGG | - | chr6.2:2621809-2621828 | MS.gene82938:intron | 50.0% | |
| GGAATGTGCTTCTCGAGTTC+TGG | + | chr6.2:2621482-2621501 | None:intergenic | 50.0% | |
| GTGACATAGGCAGGGTGAAA+TGG | + | chr6.2:2621530-2621549 | None:intergenic | 50.0% | |
| GTGACGTGGCAATGATTACG+TGG | + | chr6.2:2620198-2620217 | None:intergenic | 50.0% | |
| TGAGCTTACATGAAGGTCCC+TGG | + | chr6.2:2619353-2619372 | None:intergenic | 50.0% | |
| TGATTAGGCATGTAGCGCCA+TGG | + | chr6.2:2622478-2622497 | None:intergenic | 50.0% | |
| TGGAACCACCATTGATGCAC+AGG | - | chr6.2:2622519-2622538 | MS.gene82938:intron | 50.0% | |
| TGTTGAGAATAGGCCTCTGG+TGG | - | chr6.2:2621117-2621136 | MS.gene82938:intron | 50.0% | |
| TTAACTGTCGCAGAGGTCAC+AGG | - | chr6.2:2621647-2621666 | MS.gene82938:intron | 50.0% | |
| TTAGAGCTGCTTCTAACCGC+CGG | - | chr6.2:2621578-2621597 | MS.gene82938:intron | 50.0% | |
| TTTCCGCAGTGACATAGGCA+GGG | + | chr6.2:2621538-2621557 | None:intergenic | 50.0% | |
| TTTGGTCATTTCGCGTGACG+TGG | + | chr6.2:2620212-2620231 | None:intergenic | 50.0% | |
| ! | ATGAAGGTCCCTGGTGATGA+TGG | + | chr6.2:2619344-2619363 | None:intergenic | 50.0% |
| ! | CAATGCTCGTGGAGCACTTA+TGG | - | chr6.2:2622269-2622288 | MS.gene82938:intron | 50.0% |
| ! | GCACCGACACTTCAGATTGT+AGG | - | chr6.2:2622717-2622736 | MS.gene82938:intron | 50.0% |
| ! | TGTTCTAGTGGACACGTTGC+AGG | - | chr6.2:2622315-2622334 | MS.gene82938:intron | 50.0% |
| !! | TCCCTGGTGATGATGGAAGA+AGG | + | chr6.2:2619337-2619356 | None:intergenic | 50.0% |
| !! | TGCTGGTTTAACTGTCGCAG+AGG | - | chr6.2:2621640-2621659 | MS.gene82938:intron | 50.0% |
| CGCGAGTGGTTGGAATCACA+AGG | - | chr6.2:2621234-2621253 | MS.gene82938:CDS | 55.0% | |
| CTTTCCGCAGTGACATAGGC+AGG | + | chr6.2:2621539-2621558 | None:intergenic | 55.0% | |
| GTGATCAGAACCAATGCCGG+CGG | + | chr6.2:2621597-2621616 | None:intergenic | 55.0% | |
| TCACCCTGCCTATGTCACTG+CGG | - | chr6.2:2621532-2621551 | MS.gene82938:intron | 55.0% | |
| !! | CAACACTGTGTCGGTTGCTG+AGG | - | chr6.2:2621673-2621692 | MS.gene82938:intron | 55.0% |
| ACAGTTGGAACGGTCGGTGC+TGG | - | chr6.2:2621815-2621834 | MS.gene82938:intron | 60.0% | |
| CTGCTTCTAACCGCCGGCAT+TGG | - | chr6.2:2621584-2621603 | MS.gene82938:intron | 60.0% | |
| !! | ACGGTCGGTGCTGGACGAAT+TGG | - | chr6.2:2621824-2621843 | MS.gene82938:intron | 60.0% |
| !! | CGGTCGGTGCTGGACGAATT+GGG | - | chr6.2:2621825-2621844 | MS.gene82938:intron | 60.0% |
| CTCAATGCTGCGGCTGCTGC+TGG | - | chr6.2:2621623-2621642 | MS.gene82938:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 2619268 | 2623231 | 2619268 | ID=MS.gene82938 |
| chr6.2 | mRNA | 2619268 | 2623231 | 2619268 | ID=MS.gene82938.t1;Parent=MS.gene82938 |
| chr6.2 | exon | 2623136 | 2623231 | 2623136 | ID=MS.gene82938.t1.exon1;Parent=MS.gene82938.t1 |
| chr6.2 | CDS | 2623136 | 2623231 | 2623136 | ID=cds.MS.gene82938.t1;Parent=MS.gene82938.t1 |
| chr6.2 | exon | 2621199 | 2621370 | 2621199 | ID=MS.gene82938.t1.exon2;Parent=MS.gene82938.t1 |
| chr6.2 | CDS | 2621199 | 2621370 | 2621199 | ID=cds.MS.gene82938.t1;Parent=MS.gene82938.t1 |
| chr6.2 | exon | 2620476 | 2621016 | 2620476 | ID=MS.gene82938.t1.exon3;Parent=MS.gene82938.t1 |
| chr6.2 | CDS | 2620476 | 2621016 | 2620476 | ID=cds.MS.gene82938.t1;Parent=MS.gene82938.t1 |
| chr6.2 | exon | 2620163 | 2620287 | 2620163 | ID=MS.gene82938.t1.exon4;Parent=MS.gene82938.t1 |
| chr6.2 | CDS | 2620163 | 2620287 | 2620163 | ID=cds.MS.gene82938.t1;Parent=MS.gene82938.t1 |
| chr6.2 | exon | 2619959 | 2620071 | 2619959 | ID=MS.gene82938.t1.exon5;Parent=MS.gene82938.t1 |
| chr6.2 | CDS | 2619959 | 2620071 | 2619959 | ID=cds.MS.gene82938.t1;Parent=MS.gene82938.t1 |
| chr6.2 | exon | 2619268 | 2619381 | 2619268 | ID=MS.gene82938.t1.exon6;Parent=MS.gene82938.t1 |
| chr6.2 | CDS | 2619268 | 2619381 | 2619268 | ID=cds.MS.gene82938.t1;Parent=MS.gene82938.t1 |
| Gene Sequence |
| Protein sequence |
