Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86255.t1 | AES58877.2 | 85.3 | 401 | 57 | 1 | 1 | 401 | 1 | 399 | 3.10E-177 | 631.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86255.t1 | Q9SW11 | 22.3 | 368 | 264 | 9 | 28 | 381 | 32 | 391 | 5.7e-10 | 67.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86255.t1 | G7I5N8 | 85.3 | 401 | 57 | 1 | 1 | 401 | 1 | 399 | 2.3e-177 | 631.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene86255 | 0.801662 | 8.10E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene86255 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene052447 | MS.gene86255 | 0.802059 | 6.71E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene86255 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene86255 | 0.803076 | 4.14E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene86255 | 0.803327 | 3.68E-49 | -1.69E-46 |
| MS.gene05925 | MS.gene86255 | 0.807782 | 4.27E-50 | -1.69E-46 |
| MS.gene059458 | MS.gene86255 | 0.881223 | 2.87E-70 | -1.69E-46 |
| MS.gene059459 | MS.gene86255 | 0.937886 | 1.67E-98 | -1.69E-46 |
| MS.gene059460 | MS.gene86255 | 0.958748 | 1.09E-116 | -1.69E-46 |
| MS.gene059584 | MS.gene86255 | 0.803581 | 3.26E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene86255 | 0.801638 | 8.19E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86255.t1 | MTR_1g009310 | 93.187 | 411 | 26 | 1 | 1 | 411 | 1 | 409 | 0.0 | 742 |
| MS.gene86255.t1 | MTR_3g109100 | 58.612 | 418 | 153 | 8 | 1 | 411 | 1 | 405 | 5.94e-146 | 434 |
| MS.gene86255.t1 | MTR_6g093030 | 43.418 | 433 | 197 | 13 | 6 | 411 | 5 | 416 | 1.98e-93 | 298 |
| MS.gene86255.t1 | MTR_8g101300 | 44.418 | 421 | 198 | 11 | 9 | 411 | 7 | 409 | 1.35e-92 | 296 |
| MS.gene86255.t1 | MTR_8g101320 | 45.742 | 411 | 171 | 12 | 9 | 407 | 7 | 377 | 7.50e-90 | 288 |
| MS.gene86255.t1 | MTR_2g105930 | 42.280 | 421 | 214 | 12 | 1 | 411 | 1 | 402 | 8.34e-83 | 270 |
| MS.gene86255.t1 | MTR_3g109080 | 52.577 | 194 | 77 | 3 | 10 | 200 | 23 | 204 | 7.60e-64 | 206 |
| MS.gene86255.t1 | MTR_2g105930 | 43.574 | 319 | 159 | 10 | 98 | 411 | 16 | 318 | 8.06e-62 | 212 |
| MS.gene86255.t1 | MTR_3g109110 | 52.941 | 170 | 74 | 1 | 10 | 179 | 6 | 169 | 2.02e-56 | 187 |
| MS.gene86255.t1 | MTR_3g104660 | 32.824 | 393 | 187 | 16 | 17 | 398 | 14 | 340 | 1.81e-38 | 147 |
| MS.gene86255.t1 | MTR_2g099530 | 37.264 | 212 | 104 | 9 | 19 | 227 | 12 | 197 | 1.02e-30 | 124 |
| MS.gene86255.t1 | MTR_1g009280 | 49.580 | 119 | 51 | 3 | 65 | 182 | 17 | 127 | 2.27e-26 | 108 |
| MS.gene86255.t1 | MTR_1g015050 | 27.249 | 389 | 201 | 15 | 13 | 382 | 5 | 330 | 1.68e-25 | 109 |
| MS.gene86255.t1 | MTR_8g018830 | 35.196 | 179 | 102 | 5 | 19 | 193 | 18 | 186 | 1.33e-23 | 103 |
| MS.gene86255.t1 | MTR_4g125930 | 27.317 | 410 | 221 | 12 | 18 | 414 | 7 | 352 | 2.93e-22 | 99.8 |
| MS.gene86255.t1 | MTR_3g008270 | 31.447 | 159 | 101 | 4 | 17 | 171 | 15 | 169 | 3.84e-17 | 84.3 |
| MS.gene86255.t1 | MTR_3g008280 | 31.447 | 159 | 101 | 4 | 17 | 171 | 23 | 177 | 1.10e-16 | 82.8 |
| MS.gene86255.t1 | MTR_3g008280 | 29.747 | 158 | 101 | 4 | 15 | 171 | 21 | 169 | 1.34e-14 | 76.3 |
| MS.gene86255.t1 | MTR_7g014950 | 34.646 | 127 | 68 | 5 | 25 | 143 | 25 | 144 | 3.75e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86255.t1 | AT2G24370 | 51.889 | 397 | 161 | 7 | 1 | 377 | 1 | 387 | 4.58e-131 | 396 |
| MS.gene86255.t1 | AT4G31230 | 53.253 | 415 | 174 | 10 | 3 | 407 | 1 | 405 | 5.04e-122 | 372 |
| MS.gene86255.t1 | AT4G31230 | 56.169 | 308 | 126 | 7 | 102 | 407 | 6 | 306 | 1.22e-90 | 288 |
| MS.gene86255.t1 | AT5G35380 | 41.071 | 392 | 187 | 10 | 18 | 407 | 12 | 361 | 4.13e-84 | 272 |
| MS.gene86255.t1 | AT1G78940 | 43.059 | 425 | 183 | 15 | 1 | 403 | 1 | 388 | 2.57e-83 | 270 |
| MS.gene86255.t1 | AT1G78940 | 43.059 | 425 | 183 | 15 | 1 | 403 | 1 | 388 | 6.03e-83 | 270 |
| MS.gene86255.t1 | AT1G16760 | 41.121 | 428 | 204 | 11 | 1 | 411 | 1 | 397 | 5.78e-80 | 262 |
| MS.gene86255.t1 | AT1G16760 | 41.121 | 428 | 204 | 11 | 1 | 411 | 1 | 397 | 8.98e-80 | 261 |
| MS.gene86255.t1 | AT3G20200 | 37.882 | 425 | 219 | 10 | 1 | 404 | 1 | 401 | 2.84e-78 | 257 |
| MS.gene86255.t1 | AT2G07020 | 39.250 | 400 | 190 | 9 | 18 | 414 | 14 | 363 | 3.58e-78 | 256 |
| MS.gene86255.t1 | AT3G20200 | 37.882 | 425 | 219 | 10 | 1 | 404 | 1 | 401 | 4.17e-78 | 257 |
| MS.gene86255.t1 | AT3G20200 | 37.882 | 425 | 219 | 10 | 1 | 404 | 1 | 401 | 4.17e-78 | 257 |
| MS.gene86255.t1 | AT3G20200 | 37.882 | 425 | 219 | 10 | 1 | 404 | 1 | 401 | 7.30e-78 | 256 |
| MS.gene86255.t1 | AT1G78940 | 43.195 | 338 | 145 | 13 | 87 | 403 | 6 | 317 | 1.56e-63 | 216 |
| MS.gene86255.t1 | AT5G26150 | 36.320 | 413 | 182 | 17 | 14 | 407 | 17 | 367 | 1.47e-57 | 201 |
| MS.gene86255.t1 | AT5G26150 | 36.562 | 413 | 176 | 18 | 14 | 407 | 17 | 362 | 1.78e-55 | 195 |
| MS.gene86255.t1 | AT5G20310 | 34.177 | 395 | 202 | 11 | 16 | 407 | 9 | 348 | 1.36e-51 | 178 |
| MS.gene86255.t1 | AT5G12000 | 36.275 | 408 | 192 | 13 | 14 | 411 | 14 | 363 | 3.20e-50 | 181 |
| MS.gene86255.t1 | AT1G17540 | 30.846 | 402 | 216 | 11 | 16 | 411 | 13 | 358 | 1.06e-40 | 154 |
| MS.gene86255.t1 | AT5G12000 | 36.624 | 314 | 153 | 9 | 106 | 411 | 3 | 278 | 2.81e-34 | 135 |
| MS.gene86255.t1 | AT1G72760 | 38.650 | 163 | 81 | 4 | 17 | 178 | 25 | 169 | 1.25e-28 | 118 |
| MS.gene86255.t1 | AT1G72760 | 38.650 | 163 | 81 | 4 | 17 | 178 | 16 | 160 | 2.42e-28 | 118 |
| MS.gene86255.t1 | AT1G72760 | 38.650 | 163 | 81 | 4 | 17 | 178 | 25 | 169 | 2.65e-28 | 117 |
| MS.gene86255.t1 | AT5G61550 | 26.728 | 434 | 252 | 17 | 18 | 411 | 24 | 431 | 1.02e-20 | 95.1 |
| MS.gene86255.t1 | AT5G61550 | 26.728 | 434 | 252 | 17 | 18 | 411 | 24 | 431 | 1.02e-20 | 95.1 |
| MS.gene86255.t1 | AT5G61550 | 26.728 | 434 | 252 | 17 | 18 | 411 | 24 | 431 | 1.02e-20 | 95.1 |
| MS.gene86255.t1 | AT5G61550 | 26.728 | 434 | 252 | 17 | 18 | 411 | 24 | 431 | 1.05e-20 | 95.1 |
| MS.gene86255.t1 | AT2G19410 | 27.204 | 397 | 245 | 14 | 27 | 411 | 40 | 404 | 5.32e-19 | 90.1 |
| MS.gene86255.t1 | AT5G57035 | 24.627 | 402 | 241 | 11 | 13 | 411 | 24 | 366 | 8.39e-19 | 89.4 |
| MS.gene86255.t1 | AT5G61560 | 27.273 | 165 | 107 | 5 | 17 | 177 | 7 | 162 | 1.39e-12 | 70.1 |
| MS.gene86255.t1 | AT5G61560 | 27.273 | 165 | 107 | 5 | 17 | 177 | 26 | 181 | 1.49e-12 | 70.1 |
| MS.gene86255.t1 | AT5G61560 | 27.273 | 165 | 107 | 5 | 17 | 177 | 26 | 181 | 1.49e-12 | 70.1 |
| MS.gene86255.t1 | AT5G61560 | 27.607 | 163 | 105 | 5 | 17 | 175 | 7 | 160 | 1.52e-12 | 70.1 |
| MS.gene86255.t1 | AT5G61560 | 27.607 | 163 | 105 | 5 | 17 | 175 | 7 | 160 | 1.52e-12 | 70.1 |
Find 94 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGTGAGTGCTTCTTTAC+AGG | 0.151575 | 1.4:+10529273 | None:intergenic |
| CTTCTTCTAATTTCCATCTT+TGG | 0.173618 | 1.4:+10529141 | None:intergenic |
| GCAATTGAGCATTTGGTTCT+AGG | 0.189630 | 1.4:-10531801 | MS.gene86255:CDS |
| TGGCCCATTTGAGTGCATTT+TGG | 0.260128 | 1.4:+10533012 | None:intergenic |
| CGCGCACAAAAGACGCGATA+TGG | 0.274810 | 1.4:+10532074 | None:intergenic |
| AGCTTTGAGTCAAACAATTA+TGG | 0.281142 | 1.4:-10530099 | MS.gene86255:CDS |
| TGAAATGAGAAGACTGAAAT+TGG | 0.311394 | 1.4:-10529329 | MS.gene86255:CDS |
| TCAATCAGCAATTGAGCATT+TGG | 0.318952 | 1.4:-10531808 | MS.gene86255:CDS |
| ATATGGACGGAAAATTTCTT+TGG | 0.323691 | 1.4:+10532091 | None:intergenic |
| GGAAGAAGGTCTATTGATAT+TGG | 0.341670 | 1.4:-10530078 | MS.gene86255:CDS |
| AGTATATTCAATTAATGCTT+TGG | 0.359907 | 1.4:+10531833 | None:intergenic |
| GCTACTGGCACACGAGGTTC+TGG | 0.370652 | 1.4:+10531206 | None:intergenic |
| ATTTCTTTGGTATGTTCATC+AGG | 0.376497 | 1.4:+10532104 | None:intergenic |
| TCTCCATATGACCTATCATT+TGG | 0.377873 | 1.4:+10530282 | None:intergenic |
| TGCATTGGCTGTAGCAGAAA+TGG | 0.379336 | 1.4:-10529081 | MS.gene86255:CDS |
| AACAATAGTTGAACCTTTAG+TGG | 0.395146 | 1.4:+10532977 | None:intergenic |
| GAAGCCAAAATGCACTCAAA+TGG | 0.413309 | 1.4:-10533016 | MS.gene86255:CDS |
| ATTCCAACAACTGTATCAAA+AGG | 0.421576 | 1.4:-10531362 | MS.gene86255:CDS |
| ATTAGAAGAAGAGAGGAGAT+TGG | 0.422286 | 1.4:-10529129 | MS.gene86255:CDS |
| TCTTTCTCATTTGATAGTGA+TGG | 0.425484 | 1.4:-10530039 | MS.gene86255:CDS |
| CCCTCAAATGACTTCCTCTC+AGG | 0.426079 | 1.4:+10531073 | None:intergenic |
| GCGAATAAACGATCTGTACT+TGG | 0.426324 | 1.4:+10530210 | None:intergenic |
| ATCTAACCTTTAGTTGCTAC+TGG | 0.426629 | 1.4:+10531191 | None:intergenic |
| ACAAAAGATATGTCACCTTC+TGG | 0.427770 | 1.4:+10530249 | None:intergenic |
| AAGATGGGATGGAATCATTC+AGG | 0.436918 | 1.4:-10531033 | MS.gene86255:intron |
| GACAAGAAGGATGGGGTGAA+TGG | 0.442455 | 1.4:-10533071 | MS.gene86255:CDS |
| ACAGTATATATTGTTGGTAA+AGG | 0.447863 | 1.4:-10531323 | MS.gene86255:CDS |
| AGTCAAACAATTATGGAAGA+AGG | 0.447897 | 1.4:-10530092 | MS.gene86255:CDS |
| CGTCCAAATGATAGGTCATA+TGG | 0.454121 | 1.4:-10530285 | MS.gene86255:CDS |
| TGTGGTTGCAAAAGAATCAA+TGG | 0.463341 | 1.4:-10533094 | MS.gene86255:CDS |
| TTCTGATATCAGAAGGTTCA+AGG | 0.467872 | 1.4:-10531393 | MS.gene86255:intron |
| AGAGGAGATTGGAGGAAGCA+AGG | 0.469616 | 1.4:-10529118 | MS.gene86255:CDS |
| CCTGAGAGGAAGTCATTTGA+GGG | 0.471329 | 1.4:-10531073 | MS.gene86255:CDS |
| AACTTAGTCAATCTAGTGTA+AGG | 0.477099 | 1.4:-10531238 | MS.gene86255:CDS |
| TTCCAACAACTGTATCAAAA+GGG | 0.478467 | 1.4:-10531361 | MS.gene86255:CDS |
| ATTGACCATCTCACCACTAA+AGG | 0.483784 | 1.4:-10532990 | MS.gene86255:CDS |
| CTAGGAGACGTCCAAATGAT+AGG | 0.483797 | 1.4:-10530293 | MS.gene86255:CDS |
| GGATGGGGTGAATGGAATAG+TGG | 0.489274 | 1.4:-10533063 | MS.gene86255:CDS |
| AATGAGAAAGATGAGTGATC+AGG | 0.490375 | 1.4:+10530051 | None:intergenic |
| AAGCCAAAATGCACTCAAAT+GGG | 0.499848 | 1.4:-10533015 | MS.gene86255:CDS |
| GTGGCAATAGACACAGATAA+AGG | 0.507364 | 1.4:-10533038 | MS.gene86255:CDS |
| GGCTGTAGCAGAAATGGAAA+AGG | 0.519595 | 1.4:-10529075 | MS.gene86255:CDS |
| GAGATTGGAGGAAGCAAGGA+TGG | 0.519698 | 1.4:-10529114 | MS.gene86255:CDS |
| CTTGGGGTTGAATTAGAAGA+TGG | 0.521687 | 1.4:+10532924 | None:intergenic |
| ACCTGAGAGGAAGTCATTTG+AGG | 0.522835 | 1.4:-10531074 | MS.gene86255:CDS |
| AGAAGAAGAGAGGAGATTGG+AGG | 0.523850 | 1.4:-10529126 | MS.gene86255:CDS |
| GATGGAAATTAGAAGAAGAG+AGG | 0.526538 | 1.4:-10529136 | MS.gene86255:CDS |
| AGGCTGTAGAACTCCAAAGA+TGG | 0.530746 | 1.4:-10529154 | MS.gene86255:CDS |
| GTGGTTGCAAAAGAATCAAT+GGG | 0.532602 | 1.4:-10533093 | MS.gene86255:CDS |
| ATCAATGGGACAAGAAGGAT+GGG | 0.533878 | 1.4:-10533079 | MS.gene86255:CDS |
| ACTATATGACAGCCTAGGGT+TGG | 0.539645 | 1.4:+10530143 | None:intergenic |
| TCATATAGTTCTGATACTGA+TGG | 0.544531 | 1.4:-10530129 | MS.gene86255:CDS |
| ATTGAGCAGTGTTCAGTGGT+GGG | 0.546462 | 1.4:-10532134 | MS.gene86255:CDS |
| TTGAACCTTTAGTGGTGAGA+TGG | 0.547911 | 1.4:+10532985 | None:intergenic |
| AAAGAATCAATGGGACAAGA+AGG | 0.551701 | 1.4:-10533084 | MS.gene86255:CDS |
| TTTAGTGGTGAGATGGTCAA+TGG | 0.552507 | 1.4:+10532992 | None:intergenic |
| TCAGAACTATATGACAGCCT+AGG | 0.552705 | 1.4:+10530138 | None:intergenic |
| AATCAATGGGACAAGAAGGA+TGG | 0.555800 | 1.4:-10533080 | MS.gene86255:CDS |
| GTGGTTGTTTAACCTTGACA+TGG | 0.557945 | 1.4:+10532949 | None:intergenic |
| TTTGGACGTCTCCTAGTGAA+TGG | 0.558124 | 1.4:+10530300 | None:intergenic |
| CCATCTTGTGATCTACGTGT+TGG | 0.564056 | 1.4:+10531049 | None:intergenic |
| CGTGTGCCAGTAGCAACTAA+AGG | 0.566625 | 1.4:-10531197 | MS.gene86255:intron |
| TATTGAGCAGTGTTCAGTGG+TGG | 0.567523 | 1.4:-10532135 | MS.gene86255:CDS |
| TTCTTCTTCTGCATCAAATG+TGG | 0.567640 | 1.4:-10530013 | MS.gene86255:intron |
| GATGGCTGAAGAATCTGCAT+TGG | 0.576543 | 1.4:-10529096 | MS.gene86255:CDS |
| ACTGATCTGAATTGTAGTTG+TGG | 0.576685 | 1.4:+10530175 | None:intergenic |
| TATTGTTCTCATCCATGTCA+AGG | 0.579513 | 1.4:-10532961 | MS.gene86255:CDS |
| CAGAACTATATGACAGCCTA+GGG | 0.586560 | 1.4:+10530139 | None:intergenic |
| CATTATTGAGCAGTGTTCAG+TGG | 0.587142 | 1.4:-10532138 | MS.gene86255:CDS |
| AGCACTCACAGCACAGCAGA+AGG | 0.590737 | 1.4:-10529263 | MS.gene86255:intron |
| GATTGTAGAGGTGAAAATGC+AGG | 0.596107 | 1.4:+10531263 | None:intergenic |
| ACGTAGATCACAAGATGGGA+TGG | 0.598384 | 1.4:-10531044 | MS.gene86255:CDS |
| TGACTAAGTTGAGATTGTAG+AGG | 0.598773 | 1.4:+10531251 | None:intergenic |
| CCAACACGTAGATCACAAGA+TGG | 0.611497 | 1.4:-10531049 | MS.gene86255:CDS |
| ATTGGAGCTAAAGCAAACAA+TGG | 0.611500 | 1.4:-10529311 | MS.gene86255:CDS |
| GTTGAATTAGAAGATGGTGG+TGG | 0.613884 | 1.4:+10532930 | None:intergenic |
| TCCAACAACTGTATCAAAAG+GGG | 0.616048 | 1.4:-10531360 | MS.gene86255:CDS |
| GGGGTTGAATTAGAAGATGG+TGG | 0.616185 | 1.4:+10532927 | None:intergenic |
| CACAAAAGACGCGATATGGA+CGG | 0.622512 | 1.4:+10532078 | None:intergenic |
| GGTGAATGGAATAGTGGCAG+TGG | 0.624895 | 1.4:-10533057 | MS.gene86255:CDS |
| GGAGAACTTTCTATGCCAGA+AGG | 0.629667 | 1.4:-10530264 | MS.gene86255:CDS |
| TGTTTGATAGGTACACTGCA+AGG | 0.636280 | 1.4:-10531883 | MS.gene86255:intron |
| GTGACAGGTCACCATTCACT+AGG | 0.639260 | 1.4:-10530311 | MS.gene86255:intron |
| CAACACGTAGATCACAAGAT+GGG | 0.639809 | 1.4:-10531048 | MS.gene86255:CDS |
| TTGAAGCTGCTGAAGCACAA+AGG | 0.641497 | 1.4:-10529035 | MS.gene86255:CDS |
| TTAGTTGCTACTGGCACACG+AGG | 0.659938 | 1.4:+10531200 | None:intergenic |
| AAGGACATTGTAGTAGAACA+TGG | 0.661359 | 1.4:-10531864 | MS.gene86255:CDS |
| AAGCTGCTGAAGCACAAAGG+AGG | 0.661543 | 1.4:-10529032 | MS.gene86255:CDS |
| GCTGCAAGTAAAGGATGATG+TGG | 0.662833 | 1.4:-10529356 | MS.gene86255:intron |
| TGTTTGTATTAGCACCTGAG+AGG | 0.669859 | 1.4:-10531087 | MS.gene86255:intron |
| GCAAGTAAAGGATGATGTGG+AGG | 0.689241 | 1.4:-10529353 | MS.gene86255:intron |
| TCAATGGGACAAGAAGGATG+GGG | 0.696788 | 1.4:-10533078 | MS.gene86255:CDS |
| CTGAGAGGAAGTCATTTGAG+GGG | 0.701797 | 1.4:-10531072 | MS.gene86255:CDS |
| TGATATCAGAAGGTTCAAGG+TGG | 0.750011 | 1.4:-10531390 | MS.gene86255:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACAAAAAACAATAAATA+AGG | + | chr1.4:10529248-10529267 | None:intergenic | 10.0% |
| !!! | AAATAGTTTTTGTTTTTTTT+AGG | + | chr1.4:10531641-10531660 | None:intergenic | 10.0% |
| !! | AAGAATTATCTTATTGAAAA+AGG | - | chr1.4:10532190-10532209 | MS.gene86255:intron | 15.0% |
| !! | ATACAAACAAATTAAATTGA+TGG | - | chr1.4:10529601-10529620 | MS.gene86255:intron | 15.0% |
| !! | TACAAACAAATTAAATTGAT+GGG | - | chr1.4:10529602-10529621 | MS.gene86255:intron | 15.0% |
| !! | TTACTAAAAATTTATGTTTG+AGG | - | chr1.4:10530440-10530459 | MS.gene86255:intron | 15.0% |
| !! | TTCAATTGAAAATATATAGA+AGG | + | chr1.4:10531352-10531371 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTAACAAAGTATT+AGG | + | chr1.4:10530431-10530450 | None:intergenic | 15.0% |
| !!! | GAAATGCTATTTTTTTAATA+TGG | - | chr1.4:10532252-10532271 | MS.gene86255:intron | 15.0% |
| !!! | TAGTTAATTCAACTTTTTTA+TGG | - | chr1.4:10531771-10531790 | MS.gene86255:intron | 15.0% |
| !!! | TTTTTATGGTATATCTAAAA+TGG | - | chr1.4:10531785-10531804 | MS.gene86255:CDS | 15.0% |
| !! | AATATTGATATTACATGTCT+TGG | - | chr1.4:10530653-10530672 | MS.gene86255:intron | 20.0% |
| !! | AGTATATTCAATTAATGCTT+TGG | + | chr1.4:10530293-10530312 | None:intergenic | 20.0% |
| !! | ATATATACTGTACAAAAATC+TGG | + | chr1.4:10530791-10530810 | None:intergenic | 20.0% |
| !! | TAATAATTGATGTGCAAATA+AGG | + | chr1.4:10532901-10532920 | None:intergenic | 20.0% |
| !! | TCTTAATCAGAAGATAAAAT+TGG | - | chr1.4:10529846-10529865 | MS.gene86255:intron | 20.0% |
| !! | TGAAAGAAATATAAGAAGTA+GGG | - | chr1.4:10531562-10531581 | MS.gene86255:intron | 20.0% |
| !! | TTCAATTGAAAATAGCATTT+AGG | - | chr1.4:10531362-10531381 | MS.gene86255:CDS | 20.0% |
| !!! | ATTGTTTTTTGTTAACCATT+CGG | - | chr1.4:10529253-10529272 | MS.gene86255:intron | 20.0% |
| !!! | TAGTTTTGTTCAATGATAAA+TGG | - | chr1.4:10532663-10532682 | MS.gene86255:intron | 20.0% |
| !!! | TCTCTTTTTATTTGTTTGAT+AGG | - | chr1.4:10530228-10530247 | MS.gene86255:CDS | 20.0% |
| !!! | TTGTCAAAAAAAAGTATGTA+TGG | - | chr1.4:10531300-10531319 | MS.gene86255:CDS | 20.0% |
| !!! | TTTTGTACAGTATATATTGT+TGG | - | chr1.4:10530794-10530813 | MS.gene86255:intron | 20.0% |
| !!! | TTTTTAATATGGTTTCCTTA+AGG | - | chr1.4:10532263-10532282 | MS.gene86255:intron | 20.0% |
| !!! | TTTTTAGGAAAAATGTCAAT+AGG | + | chr1.4:10531626-10531645 | None:intergenic | 20.0% |
| ! | AATAGCAATATTACTCACTT+GGG | + | chr1.4:10529219-10529238 | None:intergenic | 25.0% |
| ! | ACCAAGAATGATAAAAAGAA+GGG | + | chr1.4:10531483-10531502 | None:intergenic | 25.0% |
| ! | AGTAATCTATTGACATAGAT+CGG | + | chr1.4:10532631-10532650 | None:intergenic | 25.0% |
| ! | ATATATGCTTAACATAAGAC+AGG | + | chr1.4:10532701-10532720 | None:intergenic | 25.0% |
| ! | ATGAAATTATTGTGCATCAT+AGG | - | chr1.4:10532949-10532968 | MS.gene86255:CDS | 25.0% |
| ! | CAACAGACCATTAATAAAAA+TGG | + | chr1.4:10532410-10532429 | None:intergenic | 25.0% |
| ! | CTGAAAGAAATATAAGAAGT+AGG | - | chr1.4:10531561-10531580 | MS.gene86255:intron | 25.0% |
| ! | GAAAAATAAGGAACATTTGT+TGG | - | chr1.4:10529560-10529579 | MS.gene86255:intron | 25.0% |
| ! | GTGATATATTTATGACACAA+CGG | - | chr1.4:10532458-10532477 | MS.gene86255:intron | 25.0% |
| ! | TAATAGCAATATTACTCACT+TGG | + | chr1.4:10529220-10529239 | None:intergenic | 25.0% |
| ! | TACCAAGAATGATAAAAAGA+AGG | + | chr1.4:10531484-10531503 | None:intergenic | 25.0% |
| ! | TATCATGAAGATTTGTCAAA+TGG | - | chr1.4:10530471-10530490 | MS.gene86255:intron | 25.0% |
| ! | TATCTTAACCTAAGTTGTTT+GGG | - | chr1.4:10529669-10529688 | MS.gene86255:intron | 25.0% |
| ! | TGCAATTCTAACAAGAAAAA+TGG | - | chr1.4:10529521-10529540 | MS.gene86255:intron | 25.0% |
| ! | TTGAATTCTTGACACTATTT+GGG | - | chr1.4:10530140-10530159 | MS.gene86255:CDS | 25.0% |
| ! | TTTGAATTCTTGACACTATT+TGG | - | chr1.4:10530139-10530158 | MS.gene86255:CDS | 25.0% |
| !! | ACAGTATATATTGTTGGTAA+AGG | - | chr1.4:10530800-10530819 | MS.gene86255:intron | 25.0% |
| !! | AGAAGATAAAATTGGTGTTT+AGG | - | chr1.4:10529854-10529873 | MS.gene86255:intron | 25.0% |
| !! | CAAAAATCATTTCTCTGTTT+TGG | + | chr1.4:10531141-10531160 | None:intergenic | 25.0% |
| !! | CAAATTTTTCTTGCAACATA+TGG | + | chr1.4:10531696-10531715 | None:intergenic | 25.0% |
| !! | GTAATAATTTTCAACCTTTG+TGG | - | chr1.4:10531445-10531464 | MS.gene86255:intron | 25.0% |
| !! | TGTTTATGTTAGTTTCTTGT+GGG | + | chr1.4:10531599-10531618 | None:intergenic | 25.0% |
| !!! | CATAAATATATCACTTTTCG+AGG | + | chr1.4:10532452-10532471 | None:intergenic | 25.0% |
| !!! | TATTGATTTCTTCATCCTTA+AGG | + | chr1.4:10532281-10532300 | None:intergenic | 25.0% |
| !!! | TTTCGTGCCATTTTTATTAA+TGG | - | chr1.4:10532400-10532419 | MS.gene86255:intron | 25.0% |
| AACAATAGTTGAACCTTTAG+TGG | + | chr1.4:10529149-10529168 | None:intergenic | 30.0% | |
| AACTTAGTCAATCTAGTGTA+AGG | - | chr1.4:10530885-10530904 | MS.gene86255:intron | 30.0% | |
| AATAAATGCAATCATTGTGC+TGG | + | chr1.4:10532168-10532187 | None:intergenic | 30.0% | |
| AATATCAATATTGTCAACCG+CGG | + | chr1.4:10530645-10530664 | None:intergenic | 30.0% | |
| AATGCGTAAACAAGTATGTA+TGG | - | chr1.4:10531271-10531290 | MS.gene86255:CDS | 30.0% | |
| AGATACTCAAAATAGTGTCA+AGG | + | chr1.4:10530187-10530206 | None:intergenic | 30.0% | |
| AGTCAAACAATTATGGAAGA+AGG | - | chr1.4:10532031-10532050 | MS.gene86255:intron | 30.0% | |
| ATAGCAATATTACTCACTTG+GGG | + | chr1.4:10529218-10529237 | None:intergenic | 30.0% | |
| ATATGGACGGAAAATTTCTT+TGG | + | chr1.4:10530035-10530054 | None:intergenic | 30.0% | |
| ATCGTATACTAGAACAATAG+TGG | + | chr1.4:10530547-10530566 | None:intergenic | 30.0% | |
| ATTCCAACAACTGTATCAAA+AGG | - | chr1.4:10530761-10530780 | MS.gene86255:intron | 30.0% | |
| ATTTCTTTGGTATGTTCATC+AGG | + | chr1.4:10530022-10530041 | None:intergenic | 30.0% | |
| CTTCTTCTAATTTCCATCTT+TGG | + | chr1.4:10532985-10533004 | None:intergenic | 30.0% | |
| GAAAAATGGAAATGTCACAA+AGG | - | chr1.4:10529535-10529554 | MS.gene86255:intron | 30.0% | |
| GAAATGTTTGATGTCACATA+CGG | - | chr1.4:10531211-10531230 | MS.gene86255:CDS | 30.0% | |
| GATCTATGTCAATAGATTAC+TGG | - | chr1.4:10532630-10532649 | MS.gene86255:intron | 30.0% | |
| GTATCTTAACCTAAGTTGTT+TGG | - | chr1.4:10529668-10529687 | MS.gene86255:intron | 30.0% | |
| GTTAAGTTTCTGATATCAGA+AGG | - | chr1.4:10530723-10530742 | MS.gene86255:intron | 30.0% | |
| TAACATAAGACAGGAACAAT+AGG | + | chr1.4:10532692-10532711 | None:intergenic | 30.0% | |
| TGAAAATCTATGAGTAGAGA+TGG | + | chr1.4:10530389-10530408 | None:intergenic | 30.0% | |
| TGAAATGAGAAGACTGAAAT+TGG | - | chr1.4:10532794-10532813 | MS.gene86255:intron | 30.0% | |
| TGACAAATCTTCATGATATG+TGG | + | chr1.4:10530469-10530488 | None:intergenic | 30.0% | |
| TGTTAGCACTATGTATAAAG+TGG | + | chr1.4:10531389-10531408 | None:intergenic | 30.0% | |
| TTCCAACAACTGTATCAAAA+GGG | - | chr1.4:10530762-10530781 | MS.gene86255:intron | 30.0% | |
| ! | ATCTAAAATGGTATTGTGAC+AGG | - | chr1.4:10531797-10531816 | MS.gene86255:CDS | 30.0% |
| ! | ATCTATGAAGTGTTACAACA+TGG | - | chr1.4:10529908-10529927 | MS.gene86255:intron | 30.0% |
| ! | ATGATGATGATAGTTTCACA+TGG | + | chr1.4:10529409-10529428 | None:intergenic | 30.0% |
| ! | GTGTTTATGTTAGTTTCTTG+TGG | + | chr1.4:10531600-10531619 | None:intergenic | 30.0% |
| ! | TCCCTTCTTTTTATCATTCT+TGG | - | chr1.4:10531479-10531498 | MS.gene86255:intron | 30.0% |
| !! | AGCTTTGAGTCAAACAATTA+TGG | - | chr1.4:10532024-10532043 | MS.gene86255:intron | 30.0% |
| !! | ATCTAGCATAGAGTTGTTTT+AGG | - | chr1.4:10529330-10529349 | MS.gene86255:CDS | 30.0% |
| !! | CTTGAGAAAACCATTTTTGT+TGG | + | chr1.4:10530353-10530372 | None:intergenic | 30.0% |
| !! | TCATATAGTTCTGATACTGA+TGG | - | chr1.4:10531994-10532013 | MS.gene86255:intron | 30.0% |
| !! | TCTTTCTCATTTGATAGTGA+TGG | - | chr1.4:10532084-10532103 | MS.gene86255:CDS | 30.0% |
| !!! | TGTAAGTTTCACTTTTTTCC+AGG | - | chr1.4:10530078-10530097 | MS.gene86255:CDS | 30.0% |
| !!! | TTTTTTTTTTGCTTTCGCAC+CGG | + | chr1.4:10529813-10529832 | None:intergenic | 30.0% |
| AAAGAATCAATGGGACAAGA+AGG | - | chr1.4:10529039-10529058 | MS.gene86255:CDS | 35.0% | |
| AAATGGAAATGTCACAAAGG+TGG | - | chr1.4:10529538-10529557 | MS.gene86255:intron | 35.0% | |
| AAGCCAAAATGCACTCAAAT+GGG | - | chr1.4:10529108-10529127 | MS.gene86255:CDS | 35.0% | |
| AAGGACATTGTAGTAGAACA+TGG | - | chr1.4:10530259-10530278 | MS.gene86255:CDS | 35.0% | |
| AATGAGAAAGATGAGTGATC+AGG | + | chr1.4:10532075-10532094 | None:intergenic | 35.0% | |
| ACAAAAGATATGTCACCTTC+TGG | + | chr1.4:10531877-10531896 | None:intergenic | 35.0% | |
| ACTGATCTGAATTGTAGTTG+TGG | + | chr1.4:10531951-10531970 | None:intergenic | 35.0% | |
| AGCACAAGTTAGTAACAATC+AGG | + | chr1.4:10532750-10532769 | None:intergenic | 35.0% | |
| ATCTAACCTTTAGTTGCTAC+TGG | + | chr1.4:10530935-10530954 | None:intergenic | 35.0% | |
| ATTAGAAGAAGAGAGGAGAT+TGG | - | chr1.4:10532994-10533013 | MS.gene86255:CDS | 35.0% | |
| ATTAGTCGCCTATCATTGAT+GGG | - | chr1.4:10529780-10529799 | MS.gene86255:intron | 35.0% | |
| ATTGGAGCTAAAGCAAACAA+TGG | - | chr1.4:10532812-10532831 | MS.gene86255:intron | 35.0% | |
| GAACTAACACTTCACATTGA+AGG | - | chr1.4:10532542-10532561 | MS.gene86255:intron | 35.0% | |
| GATGGAAATTAGAAGAAGAG+AGG | - | chr1.4:10532987-10533006 | MS.gene86255:CDS | 35.0% | |
| GATTTATGAACTCCAGTCAA+AGG | + | chr1.4:10529368-10529387 | None:intergenic | 35.0% | |
| GGAAGAAGGTCTATTGATAT+TGG | - | chr1.4:10532045-10532064 | MS.gene86255:intron | 35.0% | |
| GTCACAAAGGTGGAAAAATA+AGG | - | chr1.4:10529548-10529567 | MS.gene86255:intron | 35.0% | |
| GTGGTTGCAAAAGAATCAAT+GGG | - | chr1.4:10529030-10529049 | MS.gene86255:CDS | 35.0% | |
| TATTGTTCTCATCCATGTCA+AGG | - | chr1.4:10529162-10529181 | MS.gene86255:intron | 35.0% | |
| TCAATCAGCAATTGAGCATT+TGG | - | chr1.4:10530315-10530334 | MS.gene86255:intron | 35.0% | |
| TCCAACAACTGTATCAAAAG+GGG | - | chr1.4:10530763-10530782 | MS.gene86255:intron | 35.0% | |
| TCTCCATATGACCTATCATT+TGG | + | chr1.4:10531844-10531863 | None:intergenic | 35.0% | |
| TGTGGTTGCAAAAGAATCAA+TGG | - | chr1.4:10529029-10529048 | MS.gene86255:CDS | 35.0% | |
| TTCTGATATCAGAAGGTTCA+AGG | - | chr1.4:10530730-10530749 | MS.gene86255:intron | 35.0% | |
| TTCTTCTTCTGCATCAAATG+TGG | - | chr1.4:10532110-10532129 | MS.gene86255:CDS | 35.0% | |
| TTTCCAGGATAGAAAACAAG+AGG | - | chr1.4:10530093-10530112 | MS.gene86255:CDS | 35.0% | |
| ! | ATATCTTTTGTAAGCTCAGG+AGG | - | chr1.4:10531886-10531905 | MS.gene86255:intron | 35.0% |
| ! | CAGCAGAAGGTATGAAAAAT+TGG | - | chr1.4:10532873-10532892 | MS.gene86255:intron | 35.0% |
| ! | GACATATCTTTTGTAAGCTC+AGG | - | chr1.4:10531883-10531902 | MS.gene86255:intron | 35.0% |
| ! | TGAAGTGTTACAACATGGTA+TGG | - | chr1.4:10529913-10529932 | MS.gene86255:intron | 35.0% |
| ! | TGACTAAGTTGAGATTGTAG+AGG | + | chr1.4:10530875-10530894 | None:intergenic | 35.0% |
| ! | TGTTTTCTTGCATCACAAGT+AGG | - | chr1.4:10531512-10531531 | MS.gene86255:intron | 35.0% |
| ! | TTATCAGAGGAAGGAGATTT+TGG | - | chr1.4:10529276-10529295 | MS.gene86255:CDS | 35.0% |
| ! | TTGGTCATTTGGAGTTTGAT+CGG | - | chr1.4:10529295-10529314 | MS.gene86255:CDS | 35.0% |
| !! | AGTGTTAGTTCTACATAGCT+AGG | + | chr1.4:10532533-10532552 | None:intergenic | 35.0% |
| !! | TGATTTGAAGTGCCTTTTTC+TGG | - | chr1.4:10529940-10529959 | MS.gene86255:intron | 35.0% |
| !!! | ACCATTGTCATTTTGTGTGT+CGG | + | chr1.4:10532580-10532599 | None:intergenic | 35.0% |
| !!! | TAGAGTTGTTTTAGGCACTT+CGG | - | chr1.4:10529338-10529357 | MS.gene86255:CDS | 35.0% |
| !!! | TTTCCTCTTGTTTTCTATCC+TGG | + | chr1.4:10530099-10530118 | None:intergenic | 35.0% |
| AAATATAAGAAGTAGGGCCG+AGG | - | chr1.4:10531568-10531587 | MS.gene86255:intron | 40.0% | |
| AAGATGGGATGGAATCATTC+AGG | - | chr1.4:10531090-10531109 | MS.gene86255:intron | 40.0% | |
| AATATAAGAAGTAGGGCCGA+GGG | - | chr1.4:10531569-10531588 | MS.gene86255:intron | 40.0% | |
| AATCAATGGGACAAGAAGGA+TGG | - | chr1.4:10529043-10529062 | MS.gene86255:CDS | 40.0% | |
| ATCAATGGGACAAGAAGGAT+GGG | - | chr1.4:10529044-10529063 | MS.gene86255:CDS | 40.0% | |
| ATTGACCATCTCACCACTAA+AGG | - | chr1.4:10529133-10529152 | MS.gene86255:CDS | 40.0% | |
| CAACACGTAGATCACAAGAT+GGG | - | chr1.4:10531075-10531094 | MS.gene86255:CDS | 40.0% | |
| CAGAACTATATGACAGCCTA+GGG | + | chr1.4:10531987-10532006 | None:intergenic | 40.0% | |
| CATTATTGAGCAGTGTTCAG+TGG | - | chr1.4:10529985-10530004 | MS.gene86255:intron | 40.0% | |
| CGTCCAAATGATAGGTCATA+TGG | - | chr1.4:10531838-10531857 | MS.gene86255:CDS | 40.0% | |
| CTAGGCTCTTCCAACAAAAA+TGG | - | chr1.4:10530340-10530359 | MS.gene86255:intron | 40.0% | |
| CTTGGGGTTGAATTAGAAGA+TGG | + | chr1.4:10529202-10529221 | None:intergenic | 40.0% | |
| GAAGCCAAAATGCACTCAAA+TGG | - | chr1.4:10529107-10529126 | MS.gene86255:CDS | 40.0% | |
| GATTGTAGAGGTGAAAATGC+AGG | + | chr1.4:10530863-10530882 | None:intergenic | 40.0% | |
| GCGAATAAACGATCTGTACT+TGG | + | chr1.4:10531916-10531935 | None:intergenic | 40.0% | |
| GTGGCAATAGACACAGATAA+AGG | - | chr1.4:10529085-10529104 | MS.gene86255:CDS | 40.0% | |
| GTGGTTGTTTAACCTTGACA+TGG | + | chr1.4:10529177-10529196 | None:intergenic | 40.0% | |
| GTTAACCATTCGGTTATCAG+AGG | - | chr1.4:10529263-10529282 | MS.gene86255:intron | 40.0% | |
| TCAATGATAGGCGACTAATC+CGG | + | chr1.4:10529779-10529798 | None:intergenic | 40.0% | |
| TCAGAACTATATGACAGCCT+AGG | + | chr1.4:10531988-10532007 | None:intergenic | 40.0% | |
| TGATATCAGAAGGTTCAAGG+TGG | - | chr1.4:10530733-10530752 | MS.gene86255:intron | 40.0% | |
| TGCATCACAAGTAGGTAGTT+CGG | - | chr1.4:10531520-10531539 | MS.gene86255:intron | 40.0% | |
| TGTTTGATAGGTACACTGCA+AGG | - | chr1.4:10530240-10530259 | MS.gene86255:CDS | 40.0% | |
| TGTTTGTATTAGCACCTGAG+AGG | - | chr1.4:10531036-10531055 | MS.gene86255:CDS | 40.0% | |
| TTGAACCTTTAGTGGTGAGA+TGG | + | chr1.4:10529141-10529160 | None:intergenic | 40.0% | |
| TTGGAGTTTGATCGGAAGAT+AGG | - | chr1.4:10529303-10529322 | MS.gene86255:CDS | 40.0% | |
| TTTAGTGGTGAGATGGTCAA+TGG | + | chr1.4:10529134-10529153 | None:intergenic | 40.0% | |
| ! | CTAACTTGTGCTGCAAGTAA+AGG | - | chr1.4:10532758-10532777 | MS.gene86255:intron | 40.0% |
| ! | GATTAGTCGCCTATCATTGA+TGG | - | chr1.4:10529779-10529798 | MS.gene86255:intron | 40.0% |
| ! | GTTGAATTAGAAGATGGTGG+TGG | + | chr1.4:10529196-10529215 | None:intergenic | 40.0% |
| !! | GCAATTGAGCATTTGGTTCT+AGG | - | chr1.4:10530322-10530341 | MS.gene86255:intron | 40.0% |
| !! | GGAAGGAGATTTTGGTCATT+TGG | - | chr1.4:10529284-10529303 | MS.gene86255:CDS | 40.0% |
| !!! | CCATTGTCATTTTGTGTGTC+GGG | + | chr1.4:10532579-10532598 | None:intergenic | 40.0% |
| AACCTAAGTTGTTTGGGCTC+CGG | - | chr1.4:10529675-10529694 | MS.gene86255:intron | 45.0% | |
| ACCATTCGGTTATCAGAGGA+AGG | - | chr1.4:10529267-10529286 | MS.gene86255:CDS | 45.0% | |
| ACCTGAGAGGAAGTCATTTG+AGG | - | chr1.4:10531049-10531068 | MS.gene86255:CDS | 45.0% | |
| ACGTAGATCACAAGATGGGA+TGG | - | chr1.4:10531079-10531098 | MS.gene86255:intron | 45.0% | |
| ACTATATGACAGCCTAGGGT+TGG | + | chr1.4:10531983-10532002 | None:intergenic | 45.0% | |
| AGAAGAAGAGAGGAGATTGG+AGG | - | chr1.4:10532997-10533016 | MS.gene86255:CDS | 45.0% | |
| AGGCTGTAGAACTCCAAAGA+TGG | - | chr1.4:10532969-10532988 | MS.gene86255:CDS | 45.0% | |
| ATTGAGCAGTGTTCAGTGGT+GGG | - | chr1.4:10529989-10530008 | MS.gene86255:intron | 45.0% | |
| CACAAAAGACGCGATATGGA+CGG | + | chr1.4:10530048-10530067 | None:intergenic | 45.0% | |
| CACTATTTACCAGTGATCCG+CGG | - | chr1.4:10530625-10530644 | MS.gene86255:intron | 45.0% | |
| CCAACACGTAGATCACAAGA+TGG | - | chr1.4:10531074-10531093 | MS.gene86255:CDS | 45.0% | |
| CCATCTTGTGATCTACGTGT+TGG | + | chr1.4:10531077-10531096 | None:intergenic | 45.0% | |
| CCCGACACACAAAATGACAA+TGG | - | chr1.4:10532576-10532595 | MS.gene86255:intron | 45.0% | |
| CCTGAGAGGAAGTCATTTGA+GGG | - | chr1.4:10531050-10531069 | MS.gene86255:CDS | 45.0% | |
| CTAGGAGACGTCCAAATGAT+AGG | - | chr1.4:10531830-10531849 | MS.gene86255:CDS | 45.0% | |
| CTGAGAGGAAGTCATTTGAG+GGG | - | chr1.4:10531051-10531070 | MS.gene86255:CDS | 45.0% | |
| GATGGCTGAAGAATCTGCAT+TGG | - | chr1.4:10533027-10533046 | MS.gene86255:CDS | 45.0% | |
| GATTCCGACCCATCAATGAT+AGG | + | chr1.4:10529791-10529810 | None:intergenic | 45.0% | |
| GCAAGTAAAGGATGATGTGG+AGG | - | chr1.4:10532770-10532789 | MS.gene86255:intron | 45.0% | |
| GCTGCAAGTAAAGGATGATG+TGG | - | chr1.4:10532767-10532786 | MS.gene86255:intron | 45.0% | |
| GGAAAAGTGATACGCCACAA+AGG | + | chr1.4:10531462-10531481 | None:intergenic | 45.0% | |
| GGAGAACTTTCTATGCCAGA+AGG | - | chr1.4:10531859-10531878 | MS.gene86255:CDS | 45.0% | |
| GGCTGTAGCAGAAATGGAAA+AGG | - | chr1.4:10533048-10533067 | MS.gene86255:CDS | 45.0% | |
| GGGGTTGAATTAGAAGATGG+TGG | + | chr1.4:10529199-10529218 | None:intergenic | 45.0% | |
| GTTTCTTGTGGGTAAACCCT+CGG | + | chr1.4:10531588-10531607 | None:intergenic | 45.0% | |
| TATTGAGCAGTGTTCAGTGG+TGG | - | chr1.4:10529988-10530007 | MS.gene86255:intron | 45.0% | |
| TCAATGGGACAAGAAGGATG+GGG | - | chr1.4:10529045-10529064 | MS.gene86255:CDS | 45.0% | |
| TCACAAGTAGGTAGTTCGGT+TGG | - | chr1.4:10531524-10531543 | MS.gene86255:intron | 45.0% | |
| TCCTTCCTCTGATAACCGAA+TGG | + | chr1.4:10529271-10529290 | None:intergenic | 45.0% | |
| TGCTGTGAGTGCTTCTTTAC+AGG | + | chr1.4:10532853-10532872 | None:intergenic | 45.0% | |
| TTGAAGCTGCTGAAGCACAA+AGG | - | chr1.4:10533088-10533107 | MS.gene86255:CDS | 45.0% | |
| TTTGGACGTCTCCTAGTGAA+TGG | + | chr1.4:10531826-10531845 | None:intergenic | 45.0% | |
| ! | AAGTGCCTTTTTCTGGATGC+AGG | - | chr1.4:10529947-10529966 | MS.gene86255:intron | 45.0% |
| ! | AGTCAAGCTTTTCCAACCCT+AGG | - | chr1.4:10531968-10531987 | MS.gene86255:intron | 45.0% |
| ! | AGTGCCTTTTTCTGGATGCA+GGG | - | chr1.4:10529948-10529967 | MS.gene86255:intron | 45.0% |
| ! | ATCATTGATGGGTCGGAATC+CGG | - | chr1.4:10529791-10529810 | MS.gene86255:intron | 45.0% |
| ! | CTTTTGTAAGCTCAGGAGGA+AGG | - | chr1.4:10531890-10531909 | MS.gene86255:intron | 45.0% |
| ! | GCCCCTTTTGATACAGTTGT+TGG | + | chr1.4:10530767-10530786 | None:intergenic | 45.0% |
| ! | TGGCCCATTTGAGTGCATTT+TGG | + | chr1.4:10529114-10529133 | None:intergenic | 45.0% |
| !! | TGCATTGGCTGTAGCAGAAA+TGG | - | chr1.4:10533042-10533061 | MS.gene86255:CDS | 45.0% |
| !! | ATTATTATTAGTAATAAATT+TGG | - | chr1.4:10529442-10529461 | MS.gene86255:intron | 5.0% |
| AAGCTGCTGAAGCACAAAGG+AGG | - | chr1.4:10533091-10533110 | MS.gene86255:CDS | 50.0% | |
| CACTTCGGATCTCCTTTGAC+TGG | - | chr1.4:10529353-10529372 | MS.gene86255:intron | 50.0% | |
| CCCTCAAATGACTTCCTCTC+AGG | + | chr1.4:10531053-10531072 | None:intergenic | 50.0% | |
| CGCGGATCACTGGTAAATAG+TGG | + | chr1.4:10530627-10530646 | None:intergenic | 50.0% | |
| CGTGTGCCAGTAGCAACTAA+AGG | - | chr1.4:10530926-10530945 | MS.gene86255:intron | 50.0% | |
| GACAAGAAGGATGGGGTGAA+TGG | - | chr1.4:10529052-10529071 | MS.gene86255:CDS | 50.0% | |
| GGATGGGGTGAATGGAATAG+TGG | - | chr1.4:10529060-10529079 | MS.gene86255:CDS | 50.0% | |
| GGTGAATGGAATAGTGGCAG+TGG | - | chr1.4:10529066-10529085 | MS.gene86255:CDS | 50.0% | |
| GTGACAGGTCACCATTCACT+AGG | - | chr1.4:10531812-10531831 | MS.gene86255:CDS | 50.0% | |
| GTGCTACAGCGTAGCAGAAT+TGG | - | chr1.4:10530515-10530534 | MS.gene86255:intron | 50.0% | |
| TATTGTCAACCGCGGATCAC+TGG | + | chr1.4:10530637-10530656 | None:intergenic | 50.0% | |
| TCCAAGGACGTACATTCCCA+GGG | - | chr1.4:10529713-10529732 | MS.gene86255:intron | 50.0% | |
| TGGGAATGTACGTCCTTGGA+AGG | + | chr1.4:10529713-10529732 | None:intergenic | 50.0% | |
| TTAGTTGCTACTGGCACACG+AGG | + | chr1.4:10530926-10530945 | None:intergenic | 50.0% | |
| TTCCAAGGACGTACATTCCC+AGG | - | chr1.4:10529712-10529731 | MS.gene86255:intron | 50.0% | |
| ! | GTCGCCTATCATTGATGGGT+CGG | - | chr1.4:10529784-10529803 | MS.gene86255:intron | 50.0% |
| ! | GTGCCTTTTTCTGGATGCAG+GGG | - | chr1.4:10529949-10529968 | MS.gene86255:intron | 50.0% |
| ! | TCATTTTGTGTGTCGGGCAC+TGG | + | chr1.4:10532573-10532592 | None:intergenic | 50.0% |
| ! | TTTTTCTGGATGCAGGGGCA+GGG | - | chr1.4:10529954-10529973 | MS.gene86255:intron | 50.0% |
| AGCACTCACAGCACAGCAGA+AGG | - | chr1.4:10532860-10532879 | MS.gene86255:intron | 55.0% | |
| CAAGGACGTACATTCCCAGG+GGG | - | chr1.4:10529715-10529734 | MS.gene86255:intron | 55.0% | |
| CACCGGAGCCCAAACAACTT+AGG | + | chr1.4:10529680-10529699 | None:intergenic | 55.0% | |
| CCAAGGACGTACATTCCCAG+GGG | - | chr1.4:10529714-10529733 | MS.gene86255:intron | 55.0% | |
| CGCGCACAAAAGACGCGATA+TGG | + | chr1.4:10530052-10530071 | None:intergenic | 55.0% | |
| CTAAGTTGTTTGGGCTCCGG+TGG | - | chr1.4:10529678-10529697 | MS.gene86255:intron | 55.0% | |
| CTAATCCGGCTCATGCGTAG+AGG | + | chr1.4:10529765-10529784 | None:intergenic | 55.0% | |
| CTGCCCCTGCATCCAGAAAA+AGG | + | chr1.4:10529955-10529974 | None:intergenic | 55.0% | |
| ! | ATGCGTAGAGGCATGCACAC+TGG | + | chr1.4:10529753-10529772 | None:intergenic | 55.0% |
| ! | CTTTTTCTGGATGCAGGGGC+AGG | - | chr1.4:10529953-10529972 | MS.gene86255:intron | 55.0% |
| CCCCTGGGAATGTACGTCCT+TGG | + | chr1.4:10529717-10529736 | None:intergenic | 60.0% | |
| GCATGCCTCTACGCATGAGC+CGG | - | chr1.4:10529757-10529776 | MS.gene86255:intron | 60.0% | |
| GCTACTGGCACACGAGGTTC+TGG | + | chr1.4:10530920-10530939 | None:intergenic | 60.0% | |
| GTGGCAAGGAGCTCCTTCCA+AGG | - | chr1.4:10529697-10529716 | MS.gene86255:intron | 60.0% | |
| TGGAAGGAGCTCCTTGCCAC+CGG | + | chr1.4:10529697-10529716 | None:intergenic | 60.0% | |
| TTCCCAGGGGGAACAACGCT+TGG | - | chr1.4:10529727-10529746 | MS.gene86255:intron | 60.0% | |
| TTGTTTGGGCTCCGGTGGCA+AGG | - | chr1.4:10529683-10529702 | MS.gene86255:intron | 60.0% | |
| ! | GGCCAAGCGTTGTTCCCCCT+GGG | + | chr1.4:10529732-10529751 | None:intergenic | 65.0% |
| ! | TGGCCAAGCGTTGTTCCCCC+TGG | + | chr1.4:10529733-10529752 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 10529028 | 10533117 | 10529028 | ID=MS.gene86255 |
| chr1.4 | mRNA | 10529028 | 10533117 | 10529028 | ID=MS.gene86255.t1;Parent=MS.gene86255 |
| chr1.4 | exon | 10532925 | 10533117 | 10532925 | ID=MS.gene86255.t1.exon1;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10532925 | 10533117 | 10532925 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10532067 | 10532176 | 10532067 | ID=MS.gene86255.t1.exon2;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10532067 | 10532176 | 10532067 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10531774 | 10531895 | 10531774 | ID=MS.gene86255.t1.exon3;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10531774 | 10531895 | 10531774 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10531198 | 10531403 | 10531198 | ID=MS.gene86255.t1.exon4;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10531198 | 10531403 | 10531198 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10531034 | 10531097 | 10531034 | ID=MS.gene86255.t1.exon5;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10531034 | 10531097 | 10531034 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10530014 | 10530326 | 10530014 | ID=MS.gene86255.t1.exon6;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10530014 | 10530326 | 10530014 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10529264 | 10529365 | 10529264 | ID=MS.gene86255.t1.exon7;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10529264 | 10529365 | 10529264 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| chr1.4 | exon | 10529028 | 10529174 | 10529028 | ID=MS.gene86255.t1.exon8;Parent=MS.gene86255.t1 |
| chr1.4 | CDS | 10529028 | 10529174 | 10529028 | ID=cds.MS.gene86255.t1;Parent=MS.gene86255.t1 |
| Gene Sequence |
| Protein sequence |
