Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87055.t1 | XP_003623564.1 | 95.7 | 231 | 10 | 0 | 33 | 263 | 86 | 316 | 5.80E-121 | 443.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87055.t1 | P22195 | 71.0 | 231 | 67 | 0 | 33 | 263 | 86 | 316 | 9.2e-91 | 334.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87055.t1 | G7KX22 | 95.7 | 231 | 10 | 0 | 33 | 263 | 86 | 316 | 4.2e-121 | 443.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene87055 | 0.808108 | 3.64E-50 | -1.69E-46 |
MS.gene052211 | MS.gene87055 | 0.808894 | 2.48E-50 | -1.69E-46 |
MS.gene05240 | MS.gene87055 | 0.805563 | 1.26E-49 | -1.69E-46 |
MS.gene053406 | MS.gene87055 | 0.834228 | 3.38E-56 | -1.69E-46 |
MS.gene054146 | MS.gene87055 | 0.826451 | 2.69E-54 | -1.69E-46 |
MS.gene054147 | MS.gene87055 | 0.807495 | 4.92E-50 | -1.69E-46 |
MS.gene054181 | MS.gene87055 | 0.806049 | 9.93E-50 | -1.69E-46 |
MS.gene054742 | MS.gene87055 | 0.817164 | 3.80E-52 | -1.69E-46 |
MS.gene055240 | MS.gene87055 | 0.809053 | 2.29E-50 | -1.69E-46 |
MS.gene055601 | MS.gene87055 | 0.825008 | 5.92E-54 | -1.69E-46 |
MS.gene056899 | MS.gene87055 | 0.809666 | 1.69E-50 | -1.69E-46 |
MS.gene057544 | MS.gene87055 | 0.802302 | 5.98E-49 | -1.69E-46 |
MS.gene058218 | MS.gene87055 | 0.847968 | 8.26E-60 | -1.69E-46 |
MS.gene059043 | MS.gene87055 | 0.830442 | 2.93E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87055.t1 | MTR_7g072480 | 95.671 | 231 | 10 | 0 | 33 | 263 | 86 | 316 | 7.18e-164 | 456 |
MS.gene87055.t1 | MTR_7g072510 | 76.033 | 242 | 57 | 1 | 22 | 263 | 72 | 312 | 8.72e-132 | 375 |
MS.gene87055.t1 | MTR_4g029190 | 63.948 | 233 | 82 | 1 | 33 | 263 | 108 | 340 | 3.96e-106 | 311 |
MS.gene87055.t1 | MTR_4g029200 | 62.338 | 231 | 87 | 0 | 33 | 263 | 108 | 338 | 1.29e-101 | 300 |
MS.gene87055.t1 | MTR_2g084020 | 59.483 | 232 | 93 | 1 | 33 | 263 | 87 | 318 | 1.83e-98 | 291 |
MS.gene87055.t1 | MTR_1g115900 | 61.538 | 234 | 86 | 3 | 33 | 263 | 89 | 321 | 1.56e-97 | 289 |
MS.gene87055.t1 | MTR_5g083860 | 60.086 | 233 | 91 | 1 | 33 | 263 | 93 | 325 | 2.24e-96 | 286 |
MS.gene87055.t1 | MTR_3g466180 | 65.368 | 231 | 80 | 0 | 33 | 263 | 93 | 323 | 1.94e-95 | 283 |
MS.gene87055.t1 | MTR_2g084110 | 58.874 | 231 | 95 | 0 | 33 | 263 | 87 | 317 | 3.60e-94 | 280 |
MS.gene87055.t1 | MTR_2g084080 | 58.874 | 231 | 95 | 0 | 33 | 263 | 87 | 317 | 4.89e-94 | 280 |
MS.gene87055.t1 | MTR_2g084010 | 58.190 | 232 | 96 | 1 | 33 | 263 | 87 | 318 | 1.18e-93 | 278 |
MS.gene87055.t1 | MTR_3g094650 | 59.227 | 233 | 93 | 1 | 33 | 263 | 90 | 322 | 1.45e-93 | 278 |
MS.gene87055.t1 | MTR_7g026990 | 59.307 | 231 | 93 | 1 | 33 | 263 | 93 | 322 | 3.07e-91 | 273 |
MS.gene87055.t1 | MTR_5g074970 | 59.574 | 235 | 91 | 2 | 33 | 263 | 92 | 326 | 4.22e-90 | 270 |
MS.gene87055.t1 | MTR_2g084000 | 55.603 | 232 | 102 | 1 | 33 | 263 | 88 | 319 | 6.26e-89 | 266 |
MS.gene87055.t1 | MTR_4g029170 | 57.511 | 233 | 97 | 2 | 33 | 263 | 89 | 321 | 7.85e-89 | 266 |
MS.gene87055.t1 | MTR_2g084090 | 57.328 | 232 | 98 | 1 | 33 | 263 | 87 | 318 | 8.88e-89 | 266 |
MS.gene87055.t1 | MTR_3g072190 | 56.198 | 242 | 105 | 1 | 22 | 263 | 11 | 251 | 2.40e-88 | 263 |
MS.gene87055.t1 | MTR_3g466200 | 55.556 | 234 | 101 | 2 | 33 | 263 | 87 | 320 | 3.85e-88 | 265 |
MS.gene87055.t1 | MTR_3g072190 | 56.198 | 242 | 105 | 1 | 22 | 263 | 78 | 318 | 1.36e-87 | 263 |
MS.gene87055.t1 | MTR_3g094670 | 59.227 | 233 | 93 | 1 | 33 | 263 | 90 | 322 | 3.90e-87 | 262 |
MS.gene87055.t1 | MTR_4g083710 | 57.203 | 236 | 96 | 3 | 33 | 263 | 89 | 324 | 7.16e-87 | 261 |
MS.gene87055.t1 | MTR_4g029180 | 55.794 | 233 | 101 | 2 | 33 | 263 | 89 | 321 | 4.05e-86 | 259 |
MS.gene87055.t1 | MTR_7g072490 | 62.332 | 223 | 29 | 3 | 22 | 244 | 8 | 175 | 5.34e-83 | 248 |
MS.gene87055.t1 | MTR_3g094630 | 56.967 | 244 | 102 | 2 | 22 | 263 | 80 | 322 | 1.64e-82 | 250 |
MS.gene87055.t1 | MTR_4g074990 | 55.745 | 235 | 85 | 3 | 33 | 263 | 86 | 305 | 3.03e-82 | 249 |
MS.gene87055.t1 | MTR_4g074995 | 53.814 | 236 | 91 | 4 | 33 | 263 | 86 | 308 | 1.55e-79 | 242 |
MS.gene87055.t1 | MTR_5g074860 | 51.489 | 235 | 108 | 4 | 33 | 262 | 91 | 324 | 3.56e-76 | 234 |
MS.gene87055.t1 | MTR_5g074760 | 51.271 | 236 | 109 | 4 | 33 | 263 | 87 | 321 | 9.40e-76 | 233 |
MS.gene87055.t1 | MTR_5g021060 | 48.819 | 254 | 114 | 3 | 22 | 263 | 81 | 330 | 3.27e-75 | 232 |
MS.gene87055.t1 | MTR_8g076820 | 50.000 | 242 | 111 | 4 | 31 | 263 | 90 | 330 | 8.57e-75 | 231 |
MS.gene87055.t1 | MTR_5g074740 | 50.847 | 236 | 110 | 4 | 33 | 263 | 87 | 321 | 1.31e-74 | 230 |
MS.gene87055.t1 | MTR_4g122640 | 48.945 | 237 | 115 | 2 | 33 | 263 | 100 | 336 | 3.19e-73 | 227 |
MS.gene87055.t1 | MTR_5g074710 | 50.000 | 236 | 112 | 4 | 33 | 263 | 87 | 321 | 1.09e-72 | 225 |
MS.gene87055.t1 | MTR_5g014100 | 50.820 | 244 | 107 | 3 | 33 | 263 | 88 | 331 | 1.70e-72 | 225 |
MS.gene87055.t1 | MTR_3g467600 | 50.424 | 236 | 112 | 3 | 33 | 263 | 89 | 324 | 1.07e-71 | 223 |
MS.gene87055.t1 | MTR_4g074980 | 51.293 | 232 | 88 | 4 | 33 | 263 | 87 | 294 | 2.16e-71 | 221 |
MS.gene87055.t1 | MTR_5g017860 | 49.372 | 239 | 112 | 3 | 33 | 263 | 89 | 326 | 3.83e-71 | 221 |
MS.gene87055.t1 | MTR_1g022970 | 49.167 | 240 | 113 | 2 | 33 | 263 | 108 | 347 | 4.15e-71 | 222 |
MS.gene87055.t1 | MTR_2g029860 | 49.167 | 240 | 113 | 2 | 33 | 263 | 91 | 330 | 3.52e-70 | 220 |
MS.gene87055.t1 | MTR_2g029750 | 48.750 | 240 | 114 | 2 | 33 | 263 | 91 | 330 | 5.35e-70 | 219 |
MS.gene87055.t1 | MTR_5g017850 | 48.117 | 239 | 115 | 3 | 33 | 263 | 89 | 326 | 3.66e-69 | 216 |
MS.gene87055.t1 | MTR_2g040000 | 47.325 | 243 | 116 | 3 | 33 | 263 | 89 | 331 | 6.64e-69 | 216 |
MS.gene87055.t1 | MTR_4g125940 | 47.107 | 242 | 117 | 3 | 33 | 263 | 33 | 274 | 8.78e-69 | 214 |
MS.gene87055.t1 | MTR_4g125940 | 47.107 | 242 | 117 | 3 | 33 | 263 | 88 | 329 | 2.76e-68 | 214 |
MS.gene87055.t1 | MTR_2g029850 | 47.500 | 240 | 117 | 2 | 33 | 263 | 91 | 330 | 4.06e-67 | 212 |
MS.gene87055.t1 | MTR_7g093370 | 45.082 | 244 | 125 | 2 | 29 | 263 | 128 | 371 | 5.58e-67 | 212 |
MS.gene87055.t1 | MTR_2g028980 | 47.500 | 240 | 117 | 2 | 33 | 263 | 91 | 330 | 6.94e-67 | 211 |
MS.gene87055.t1 | MTR_2g029740 | 47.500 | 240 | 117 | 2 | 33 | 263 | 91 | 330 | 3.04e-66 | 210 |
MS.gene87055.t1 | MTR_2g029830 | 46.250 | 240 | 120 | 2 | 33 | 263 | 22 | 261 | 5.60e-66 | 207 |
MS.gene87055.t1 | MTR_1g054205 | 45.417 | 240 | 122 | 2 | 33 | 263 | 87 | 326 | 1.64e-65 | 207 |
MS.gene87055.t1 | MTR_2g029730 | 46.250 | 240 | 120 | 2 | 33 | 263 | 87 | 326 | 1.74e-65 | 207 |
MS.gene87055.t1 | MTR_2g029830 | 46.250 | 240 | 120 | 2 | 33 | 263 | 90 | 329 | 3.27e-65 | 207 |
MS.gene87055.t1 | MTR_2g029815 | 46.667 | 240 | 119 | 2 | 33 | 263 | 91 | 330 | 3.61e-65 | 207 |
MS.gene87055.t1 | MTR_2g029800 | 45.833 | 240 | 121 | 2 | 33 | 263 | 91 | 330 | 4.09e-65 | 207 |
MS.gene87055.t1 | MTR_4g074980 | 61.078 | 167 | 61 | 2 | 33 | 195 | 87 | 253 | 5.76e-64 | 201 |
MS.gene87055.t1 | MTR_2g029820 | 45.833 | 240 | 121 | 2 | 33 | 263 | 91 | 330 | 5.24e-63 | 201 |
MS.gene87055.t1 | MTR_2g029560 | 45.000 | 240 | 123 | 2 | 33 | 263 | 86 | 325 | 9.60e-63 | 201 |
MS.gene87055.t1 | MTR_5g049280 | 44.033 | 243 | 124 | 4 | 33 | 263 | 95 | 337 | 1.62e-62 | 200 |
MS.gene87055.t1 | MTR_2g029910 | 46.473 | 241 | 119 | 3 | 33 | 263 | 92 | 332 | 2.97e-62 | 199 |
MS.gene87055.t1 | MTR_2g008710 | 44.215 | 242 | 122 | 4 | 33 | 263 | 86 | 325 | 3.15e-62 | 199 |
MS.gene87055.t1 | MTR_5g074700 | 47.085 | 223 | 102 | 5 | 44 | 263 | 5 | 214 | 2.62e-61 | 192 |
MS.gene87055.t1 | MTR_2g008730 | 43.802 | 242 | 123 | 4 | 33 | 263 | 62 | 301 | 3.87e-61 | 195 |
MS.gene87055.t1 | MTR_3g092990 | 41.961 | 255 | 135 | 3 | 17 | 263 | 66 | 315 | 2.16e-60 | 194 |
MS.gene87055.t1 | MTR_3g092990 | 42.739 | 241 | 130 | 2 | 31 | 263 | 86 | 326 | 3.30e-60 | 193 |
MS.gene87055.t1 | MTR_0155s0040 | 43.103 | 232 | 126 | 5 | 33 | 263 | 89 | 315 | 1.05e-56 | 184 |
MS.gene87055.t1 | MTR_7g029030 | 41.892 | 222 | 126 | 1 | 45 | 263 | 99 | 320 | 6.73e-56 | 182 |
MS.gene87055.t1 | MTR_3g072210 | 52.432 | 185 | 86 | 2 | 81 | 263 | 54 | 238 | 3.93e-55 | 177 |
MS.gene87055.t1 | MTR_4g114210 | 41.152 | 243 | 129 | 4 | 33 | 263 | 80 | 320 | 3.80e-54 | 177 |
MS.gene87055.t1 | MTR_4g030890 | 42.083 | 240 | 129 | 3 | 31 | 263 | 160 | 396 | 4.39e-54 | 180 |
MS.gene87055.t1 | MTR_4g087965 | 42.562 | 242 | 129 | 4 | 28 | 259 | 101 | 342 | 5.41e-54 | 178 |
MS.gene87055.t1 | MTR_1g077000 | 43.498 | 223 | 121 | 4 | 42 | 263 | 109 | 327 | 1.37e-53 | 176 |
MS.gene87055.t1 | MTR_4g127670 | 44.105 | 229 | 117 | 5 | 45 | 263 | 96 | 323 | 1.56e-53 | 176 |
MS.gene87055.t1 | MTR_4g031140 | 41.250 | 240 | 131 | 3 | 31 | 263 | 88 | 324 | 4.51e-53 | 176 |
MS.gene87055.t1 | MTR_2g088770 | 40.000 | 240 | 134 | 4 | 33 | 263 | 87 | 325 | 7.18e-53 | 174 |
MS.gene87055.t1 | MTR_1g086320 | 41.152 | 243 | 130 | 4 | 33 | 263 | 92 | 333 | 1.05e-52 | 174 |
MS.gene87055.t1 | MTR_5g016010 | 40.969 | 227 | 125 | 2 | 45 | 262 | 102 | 328 | 3.70e-52 | 172 |
MS.gene87055.t1 | MTR_4g133800 | 39.655 | 232 | 128 | 4 | 40 | 263 | 106 | 333 | 8.42e-52 | 172 |
MS.gene87055.t1 | MTR_4g095450 | 41.964 | 224 | 116 | 4 | 45 | 259 | 102 | 320 | 4.85e-51 | 170 |
MS.gene87055.t1 | MTR_5g074860 | 41.277 | 235 | 93 | 5 | 33 | 262 | 91 | 285 | 7.53e-51 | 168 |
MS.gene87055.t1 | MTR_1g086490 | 40.964 | 249 | 129 | 4 | 33 | 263 | 92 | 340 | 8.45e-51 | 169 |
MS.gene87055.t1 | MTR_4g046713 | 37.657 | 239 | 140 | 3 | 33 | 263 | 89 | 326 | 1.61e-50 | 168 |
MS.gene87055.t1 | MTR_8g062780 | 39.442 | 251 | 143 | 3 | 22 | 263 | 74 | 324 | 2.70e-50 | 168 |
MS.gene87055.t1 | MTR_1g038680 | 39.095 | 243 | 138 | 3 | 31 | 263 | 90 | 332 | 2.09e-49 | 166 |
MS.gene87055.t1 | MTR_7g086870 | 40.086 | 232 | 134 | 4 | 33 | 263 | 84 | 311 | 1.27e-48 | 163 |
MS.gene87055.t1 | MTR_1g009750 | 38.596 | 228 | 131 | 2 | 45 | 263 | 101 | 328 | 2.43e-48 | 163 |
MS.gene87055.t1 | MTR_2g437770 | 39.224 | 232 | 128 | 5 | 40 | 263 | 115 | 341 | 5.10e-48 | 162 |
MS.gene87055.t1 | MTR_7g086820 | 39.076 | 238 | 135 | 5 | 31 | 263 | 80 | 312 | 5.18e-48 | 162 |
MS.gene87055.t1 | MTR_5g022870 | 40.336 | 238 | 129 | 4 | 33 | 263 | 85 | 316 | 6.10e-48 | 161 |
MS.gene87055.t1 | MTR_8g075100 | 39.916 | 238 | 130 | 4 | 33 | 263 | 88 | 319 | 7.40e-48 | 161 |
MS.gene87055.t1 | MTR_1g101830 | 39.749 | 239 | 131 | 5 | 33 | 263 | 89 | 322 | 1.56e-47 | 160 |
MS.gene87055.t1 | MTR_1g090760 | 39.207 | 227 | 130 | 2 | 45 | 263 | 104 | 330 | 2.49e-47 | 160 |
MS.gene87055.t1 | MTR_0286s0010 | 39.035 | 228 | 125 | 3 | 46 | 263 | 111 | 334 | 4.03e-47 | 160 |
MS.gene87055.t1 | MTR_6g008075 | 39.035 | 228 | 125 | 3 | 46 | 263 | 111 | 334 | 4.03e-47 | 160 |
MS.gene87055.t1 | MTR_6g043460 | 41.176 | 221 | 127 | 3 | 44 | 263 | 110 | 328 | 4.31e-47 | 160 |
MS.gene87055.t1 | MTR_2g067440 | 36.940 | 268 | 129 | 6 | 33 | 262 | 121 | 386 | 6.67e-47 | 160 |
MS.gene87055.t1 | MTR_6g027440 | 38.983 | 236 | 135 | 5 | 33 | 263 | 83 | 314 | 1.33e-46 | 158 |
MS.gene87055.t1 | MTR_2g077990 | 37.121 | 264 | 128 | 5 | 33 | 259 | 140 | 402 | 2.47e-46 | 160 |
MS.gene87055.t1 | MTR_1g025980 | 39.916 | 238 | 129 | 6 | 33 | 262 | 86 | 317 | 3.08e-46 | 157 |
MS.gene87055.t1 | MTR_6g043280 | 41.126 | 231 | 130 | 4 | 34 | 263 | 107 | 332 | 4.78e-46 | 157 |
MS.gene87055.t1 | MTR_2g008160 | 37.295 | 244 | 136 | 7 | 33 | 263 | 84 | 323 | 9.91e-45 | 153 |
MS.gene87055.t1 | MTR_2g078610 | 36.364 | 264 | 130 | 5 | 33 | 259 | 140 | 402 | 1.53e-44 | 155 |
MS.gene87055.t1 | MTR_0147s0010 | 36.948 | 249 | 129 | 4 | 41 | 262 | 134 | 381 | 1.84e-44 | 154 |
MS.gene87055.t1 | MTR_7g107520 | 36.555 | 238 | 140 | 4 | 33 | 263 | 87 | 320 | 6.13e-43 | 149 |
MS.gene87055.t1 | MTR_2g067450 | 37.759 | 241 | 134 | 6 | 33 | 262 | 74 | 309 | 1.03e-41 | 145 |
MS.gene87055.t1 | MTR_5g033470 | 37.860 | 243 | 138 | 5 | 33 | 263 | 136 | 377 | 2.77e-41 | 145 |
MS.gene87055.t1 | MTR_6g043240 | 39.352 | 216 | 128 | 3 | 49 | 263 | 118 | 331 | 6.50e-41 | 144 |
MS.gene87055.t1 | MTR_2g078280 | 35.827 | 254 | 125 | 5 | 33 | 249 | 140 | 392 | 3.72e-40 | 143 |
MS.gene87055.t1 | MTR_2g099175 | 33.745 | 243 | 146 | 4 | 33 | 263 | 96 | 335 | 7.91e-40 | 141 |
MS.gene87055.t1 | MTR_1g066710 | 33.898 | 236 | 146 | 3 | 33 | 263 | 93 | 323 | 8.94e-39 | 138 |
MS.gene87055.t1 | MTR_3g105790 | 33.197 | 244 | 144 | 3 | 34 | 263 | 8 | 246 | 9.45e-38 | 133 |
MS.gene87055.t1 | MTR_1g066380 | 32.743 | 226 | 147 | 2 | 43 | 263 | 30 | 255 | 2.32e-37 | 132 |
MS.gene87055.t1 | MTR_3g105790 | 33.197 | 244 | 144 | 3 | 34 | 263 | 84 | 322 | 4.40e-37 | 133 |
MS.gene87055.t1 | MTR_1g066380 | 32.743 | 226 | 147 | 2 | 43 | 263 | 98 | 323 | 8.38e-37 | 132 |
MS.gene87055.t1 | MTR_4g132490 | 34.498 | 229 | 142 | 3 | 42 | 263 | 100 | 327 | 1.20e-36 | 132 |
MS.gene87055.t1 | MTR_1g066640 | 33.628 | 226 | 145 | 2 | 43 | 263 | 98 | 323 | 1.31e-36 | 132 |
MS.gene87055.t1 | MTR_4g132110 | 32.432 | 222 | 145 | 2 | 43 | 259 | 103 | 324 | 6.51e-36 | 130 |
MS.gene87055.t1 | MTR_1g009750 | 33.772 | 228 | 125 | 3 | 45 | 263 | 101 | 311 | 6.74e-36 | 130 |
MS.gene87055.t1 | MTR_2g029880 | 40.000 | 190 | 95 | 4 | 83 | 263 | 9 | 188 | 1.22e-35 | 127 |
MS.gene87055.t1 | MTR_1g066680 | 32.301 | 226 | 148 | 2 | 43 | 263 | 97 | 322 | 1.35e-35 | 129 |
MS.gene87055.t1 | MTR_4g132110 | 31.718 | 227 | 145 | 3 | 43 | 259 | 103 | 329 | 1.47e-33 | 124 |
MS.gene87055.t1 | MTR_2g008160 | 33.613 | 238 | 118 | 7 | 33 | 263 | 84 | 288 | 2.03e-32 | 120 |
MS.gene87055.t1 | MTR_2g078560 | 32.432 | 222 | 112 | 5 | 76 | 259 | 95 | 316 | 4.33e-27 | 107 |
MS.gene87055.t1 | MTR_2g077980 | 31.884 | 276 | 142 | 9 | 33 | 263 | 11 | 285 | 7.68e-27 | 105 |
MS.gene87055.t1 | MTR_5g058120 | 37.342 | 158 | 95 | 2 | 102 | 259 | 2 | 155 | 2.23e-23 | 95.9 |
MS.gene87055.t1 | MTR_3g462850 | 39.716 | 141 | 73 | 4 | 135 | 263 | 9 | 149 | 9.74e-23 | 91.3 |
MS.gene87055.t1 | MTR_2g008160 | 41.667 | 108 | 61 | 2 | 33 | 140 | 84 | 189 | 6.81e-20 | 85.5 |
MS.gene87055.t1 | MTR_5g074770 | 40.206 | 97 | 55 | 2 | 168 | 262 | 13 | 108 | 2.41e-18 | 78.6 |
MS.gene87055.t1 | MTR_7g086790 | 41.905 | 105 | 57 | 2 | 33 | 137 | 32 | 132 | 8.22e-17 | 76.6 |
MS.gene87055.t1 | MTR_4g031040 | 33.529 | 170 | 70 | 4 | 31 | 197 | 2 | 131 | 8.52e-17 | 75.1 |
MS.gene87055.t1 | MTR_3g107060 | 28.899 | 218 | 101 | 6 | 39 | 246 | 141 | 314 | 2.22e-16 | 77.8 |
MS.gene87055.t1 | MTR_3g072260 | 65.517 | 58 | 19 | 1 | 22 | 79 | 78 | 134 | 4.67e-15 | 70.9 |
MS.gene87055.t1 | MTR_1g098320 | 44.595 | 74 | 41 | 0 | 186 | 259 | 47 | 120 | 3.88e-14 | 68.2 |
MS.gene87055.t1 | MTR_1g089005 | 44.828 | 87 | 44 | 3 | 1 | 85 | 50 | 134 | 1.99e-11 | 61.2 |
MS.gene87055.t1 | MTR_6g048160 | 61.702 | 47 | 17 | 1 | 33 | 79 | 42 | 87 | 3.57e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87055.t1 | AT5G05340 | 59.016 | 244 | 97 | 2 | 22 | 263 | 82 | 324 | 1.78e-96 | 286 |
MS.gene87055.t1 | AT5G58400 | 59.746 | 236 | 92 | 3 | 31 | 263 | 90 | 325 | 1.31e-90 | 271 |
MS.gene87055.t1 | AT5G58390 | 55.932 | 236 | 101 | 2 | 31 | 263 | 81 | 316 | 5.25e-86 | 259 |
MS.gene87055.t1 | AT1G14550 | 53.419 | 234 | 106 | 3 | 33 | 263 | 88 | 321 | 3.14e-80 | 244 |
MS.gene87055.t1 | AT4G36430 | 50.628 | 239 | 110 | 2 | 33 | 263 | 92 | 330 | 4.54e-80 | 244 |
MS.gene87055.t1 | AT2G18150 | 50.209 | 239 | 111 | 2 | 33 | 263 | 98 | 336 | 1.51e-78 | 241 |
MS.gene87055.t1 | AT2G18140 | 49.791 | 239 | 112 | 2 | 33 | 263 | 97 | 335 | 4.98e-75 | 232 |
MS.gene87055.t1 | AT1G14540 | 49.356 | 233 | 116 | 2 | 33 | 263 | 83 | 315 | 1.76e-73 | 227 |
MS.gene87055.t1 | AT5G66390 | 47.718 | 241 | 118 | 2 | 31 | 263 | 93 | 333 | 2.37e-73 | 228 |
MS.gene87055.t1 | AT3G50990 | 47.280 | 239 | 118 | 2 | 33 | 263 | 103 | 341 | 6.26e-72 | 224 |
MS.gene87055.t1 | AT1G44970 | 49.167 | 240 | 113 | 2 | 33 | 263 | 107 | 346 | 2.09e-71 | 223 |
MS.gene87055.t1 | AT2G35380 | 48.374 | 246 | 114 | 3 | 31 | 263 | 2 | 247 | 3.74e-68 | 211 |
MS.gene87055.t1 | AT2G38390 | 46.888 | 241 | 118 | 3 | 33 | 263 | 93 | 333 | 4.31e-68 | 214 |
MS.gene87055.t1 | AT5G06720 | 46.250 | 240 | 120 | 2 | 33 | 263 | 94 | 333 | 4.87e-68 | 214 |
MS.gene87055.t1 | AT2G35380 | 48.374 | 246 | 114 | 3 | 31 | 263 | 90 | 335 | 2.51e-67 | 212 |
MS.gene87055.t1 | AT4G16270 | 48.133 | 241 | 111 | 4 | 33 | 263 | 112 | 348 | 5.98e-67 | 211 |
MS.gene87055.t1 | AT5G06730 | 46.667 | 240 | 119 | 2 | 33 | 263 | 95 | 334 | 8.80e-67 | 211 |
MS.gene87055.t1 | AT4G08780 | 46.694 | 242 | 118 | 3 | 33 | 263 | 86 | 327 | 1.14e-66 | 211 |
MS.gene87055.t1 | AT4G08770 | 47.934 | 242 | 115 | 3 | 33 | 263 | 86 | 327 | 1.51e-65 | 208 |
MS.gene87055.t1 | AT3G32980 | 45.868 | 242 | 120 | 3 | 33 | 263 | 93 | 334 | 4.60e-65 | 207 |
MS.gene87055.t1 | AT3G49110 | 46.694 | 242 | 118 | 3 | 33 | 263 | 95 | 336 | 1.61e-64 | 205 |
MS.gene87055.t1 | AT5G19890 | 46.914 | 243 | 113 | 6 | 33 | 263 | 89 | 327 | 2.07e-62 | 199 |
MS.gene87055.t1 | AT1G68850 | 40.984 | 244 | 131 | 4 | 33 | 263 | 92 | 335 | 2.94e-62 | 199 |
MS.gene87055.t1 | AT2G38380 | 45.228 | 241 | 122 | 3 | 33 | 263 | 93 | 333 | 6.67e-62 | 198 |
MS.gene87055.t1 | AT3G49120 | 45.455 | 242 | 121 | 3 | 33 | 263 | 94 | 335 | 7.68e-62 | 198 |
MS.gene87055.t1 | AT1G49570 | 45.570 | 237 | 119 | 3 | 33 | 259 | 110 | 346 | 1.59e-61 | 197 |
MS.gene87055.t1 | AT5G19880 | 45.679 | 243 | 118 | 6 | 33 | 263 | 89 | 329 | 9.87e-59 | 190 |
MS.gene87055.t1 | AT5G64120 | 41.350 | 237 | 131 | 3 | 33 | 263 | 94 | 328 | 1.65e-58 | 189 |
MS.gene87055.t1 | AT4G33420 | 45.291 | 223 | 117 | 4 | 42 | 263 | 107 | 325 | 2.24e-58 | 189 |
MS.gene87055.t1 | AT4G33420 | 45.291 | 223 | 117 | 4 | 42 | 263 | 154 | 372 | 7.07e-58 | 189 |
MS.gene87055.t1 | AT5G15180 | 42.259 | 239 | 128 | 4 | 33 | 263 | 93 | 329 | 1.08e-57 | 187 |
MS.gene87055.t1 | AT4G30170 | 44.105 | 229 | 117 | 4 | 45 | 263 | 98 | 325 | 5.53e-56 | 182 |
MS.gene87055.t1 | AT2G22420 | 40.417 | 240 | 133 | 3 | 31 | 263 | 83 | 319 | 1.47e-55 | 181 |
MS.gene87055.t1 | AT5G40150 | 43.946 | 223 | 120 | 3 | 45 | 263 | 107 | 328 | 4.02e-55 | 180 |
MS.gene87055.t1 | AT1G05240 | 40.084 | 237 | 130 | 4 | 33 | 259 | 87 | 321 | 6.78e-55 | 180 |
MS.gene87055.t1 | AT1G05250 | 40.084 | 237 | 130 | 4 | 33 | 259 | 87 | 321 | 6.78e-55 | 180 |
MS.gene87055.t1 | AT5G67400 | 42.544 | 228 | 122 | 2 | 45 | 263 | 102 | 329 | 1.35e-54 | 179 |
MS.gene87055.t1 | AT3G01190 | 42.259 | 239 | 126 | 5 | 33 | 263 | 87 | 321 | 2.26e-54 | 178 |
MS.gene87055.t1 | AT2G18980 | 43.231 | 229 | 119 | 4 | 45 | 263 | 96 | 323 | 2.96e-54 | 178 |
MS.gene87055.t1 | AT5G14130 | 40.265 | 226 | 127 | 2 | 45 | 263 | 106 | 330 | 3.09e-54 | 178 |
MS.gene87055.t1 | AT5G14130 | 40.265 | 226 | 127 | 2 | 45 | 263 | 147 | 371 | 7.67e-54 | 178 |
MS.gene87055.t1 | AT3G03670 | 40.833 | 240 | 134 | 2 | 31 | 263 | 83 | 321 | 1.17e-53 | 176 |
MS.gene87055.t1 | AT5G17820 | 39.076 | 238 | 131 | 4 | 33 | 263 | 83 | 313 | 1.75e-53 | 176 |
MS.gene87055.t1 | AT3G28200 | 42.534 | 221 | 125 | 2 | 45 | 263 | 96 | 316 | 4.72e-53 | 175 |
MS.gene87055.t1 | AT5G17820 | 39.076 | 238 | 131 | 4 | 33 | 263 | 136 | 366 | 9.03e-53 | 175 |
MS.gene87055.t1 | AT5G39580 | 42.017 | 238 | 129 | 4 | 33 | 263 | 84 | 319 | 9.94e-53 | 174 |
MS.gene87055.t1 | AT2G41480 | 41.152 | 243 | 129 | 5 | 33 | 263 | 88 | 328 | 3.96e-52 | 172 |
MS.gene87055.t1 | AT4G37530 | 42.060 | 233 | 116 | 5 | 45 | 263 | 102 | 329 | 7.90e-52 | 172 |
MS.gene87055.t1 | AT1G30870 | 40.678 | 236 | 126 | 5 | 38 | 263 | 114 | 345 | 4.24e-51 | 171 |
MS.gene87055.t1 | AT4G11290 | 38.333 | 240 | 138 | 4 | 33 | 263 | 88 | 326 | 7.82e-51 | 169 |
MS.gene87055.t1 | AT4G33870 | 36.431 | 269 | 128 | 3 | 33 | 259 | 130 | 397 | 3.44e-50 | 170 |
MS.gene87055.t1 | AT3G49960 | 41.202 | 233 | 118 | 4 | 45 | 263 | 102 | 329 | 4.63e-50 | 167 |
MS.gene87055.t1 | AT5G51890 | 42.083 | 240 | 125 | 7 | 33 | 263 | 88 | 322 | 6.48e-50 | 167 |
MS.gene87055.t1 | AT4G37520 | 39.914 | 233 | 121 | 4 | 45 | 263 | 102 | 329 | 8.34e-50 | 167 |
MS.gene87055.t1 | AT1G71695 | 43.220 | 236 | 127 | 5 | 33 | 263 | 106 | 339 | 2.52e-49 | 166 |
MS.gene87055.t1 | AT5G64110 | 41.909 | 241 | 127 | 6 | 33 | 263 | 93 | 330 | 9.30e-49 | 164 |
MS.gene87055.t1 | AT5G47000 | 39.113 | 248 | 144 | 4 | 22 | 263 | 84 | 330 | 3.47e-48 | 162 |
MS.gene87055.t1 | AT4G37520 | 39.485 | 233 | 119 | 5 | 45 | 263 | 102 | 326 | 4.71e-48 | 162 |
MS.gene87055.t1 | AT1G05260 | 38.333 | 240 | 138 | 4 | 33 | 263 | 87 | 325 | 5.71e-48 | 162 |
MS.gene87055.t1 | AT4G17690 | 38.866 | 247 | 145 | 4 | 22 | 263 | 77 | 322 | 9.13e-48 | 161 |
MS.gene87055.t1 | AT1G34510 | 40.948 | 232 | 130 | 6 | 33 | 263 | 84 | 309 | 1.98e-47 | 160 |
MS.gene87055.t1 | AT1G77100 | 39.076 | 238 | 135 | 7 | 33 | 263 | 85 | 319 | 9.46e-47 | 159 |
MS.gene87055.t1 | AT2G34060 | 40.574 | 244 | 133 | 5 | 28 | 260 | 101 | 343 | 1.09e-46 | 159 |
MS.gene87055.t1 | AT4G26010 | 39.655 | 232 | 133 | 5 | 33 | 263 | 84 | 309 | 2.56e-46 | 157 |
MS.gene87055.t1 | AT3G21770 | 36.864 | 236 | 139 | 4 | 33 | 259 | 90 | 324 | 3.16e-46 | 157 |
MS.gene87055.t1 | AT4G26010 | 39.655 | 232 | 133 | 5 | 33 | 263 | 112 | 337 | 4.75e-46 | 157 |
MS.gene87055.t1 | AT5G64100 | 37.344 | 241 | 136 | 5 | 33 | 263 | 96 | 331 | 1.57e-45 | 155 |
MS.gene87055.t1 | AT4G31760 | 36.250 | 240 | 143 | 2 | 33 | 263 | 88 | 326 | 6.41e-45 | 154 |
MS.gene87055.t1 | AT1G24110 | 37.168 | 226 | 135 | 2 | 45 | 263 | 97 | 322 | 3.48e-44 | 152 |
MS.gene87055.t1 | AT2G39040 | 38.824 | 255 | 141 | 6 | 22 | 263 | 98 | 350 | 2.19e-43 | 150 |
MS.gene87055.t1 | AT4G25980 | 33.333 | 234 | 141 | 6 | 43 | 263 | 95 | 326 | 1.30e-42 | 148 |
MS.gene87055.t1 | AT2G24800 | 36.475 | 244 | 129 | 4 | 38 | 263 | 94 | 329 | 4.02e-42 | 147 |
MS.gene87055.t1 | AT5G42180 | 38.819 | 237 | 133 | 4 | 33 | 262 | 85 | 316 | 5.07e-42 | 146 |
MS.gene87055.t1 | AT4G37530 | 44.565 | 184 | 83 | 5 | 45 | 214 | 102 | 280 | 8.40e-42 | 145 |
MS.gene87055.t1 | AT2G37130 | 36.123 | 227 | 139 | 3 | 43 | 263 | 70 | 296 | 3.10e-39 | 138 |
MS.gene87055.t1 | AT2G37130 | 36.123 | 227 | 139 | 3 | 43 | 263 | 101 | 327 | 7.20e-39 | 138 |
MS.gene87055.t1 | AT5G24070 | 32.510 | 243 | 149 | 4 | 33 | 263 | 96 | 335 | 3.09e-36 | 132 |
MS.gene87055.t1 | AT2G43480 | 32.510 | 243 | 149 | 4 | 33 | 263 | 96 | 335 | 2.05e-35 | 129 |
MS.gene87055.t1 | AT5G22410 | 34.855 | 241 | 141 | 8 | 33 | 261 | 87 | 323 | 6.54e-35 | 128 |
MS.gene87055.t1 | AT4G21960 | 31.858 | 226 | 149 | 2 | 43 | 263 | 102 | 327 | 2.64e-34 | 126 |
MS.gene87055.t1 | AT3G17070 | 33.333 | 231 | 143 | 4 | 43 | 263 | 47 | 276 | 3.31e-32 | 119 |
MS.gene87055.t1 | AT3G17070 | 33.333 | 231 | 143 | 4 | 43 | 263 | 110 | 339 | 8.58e-32 | 120 |
MS.gene87055.t1 | AT5G39580 | 43.651 | 126 | 65 | 3 | 33 | 158 | 84 | 203 | 4.21e-22 | 92.0 |
MS.gene87055.t1 | AT2G24800 | 39.316 | 117 | 69 | 1 | 38 | 152 | 94 | 210 | 5.74e-18 | 80.9 |
MS.gene87055.t1 | AT4G25980 | 37.500 | 96 | 59 | 1 | 43 | 138 | 140 | 234 | 2.33e-16 | 77.4 |
MS.gene87055.t1 | AT1G77490 | 28.037 | 214 | 130 | 5 | 39 | 246 | 145 | 340 | 1.36e-14 | 73.2 |
MS.gene87055.t1 | AT1G77490 | 28.037 | 214 | 130 | 5 | 39 | 246 | 145 | 340 | 1.80e-14 | 73.2 |
MS.gene87055.t1 | AT4G32320 | 29.577 | 213 | 96 | 5 | 44 | 246 | 155 | 323 | 5.21e-14 | 71.2 |
MS.gene87055.t1 | AT3G42570 | 36.842 | 95 | 59 | 1 | 43 | 136 | 53 | 147 | 6.47e-13 | 65.1 |
Find 52 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGCATTGTCAAATGTTTC+TGG | 0.211799 | 7.4:+32115759 | None:intergenic |
TTTAAATCACCACCTGTTCT+AGG | 0.240986 | 7.4:+32115807 | None:intergenic |
TCAGCACAAGAGACAGTATT+AGG | 0.244278 | 7.4:+32116792 | None:intergenic |
AGAGAAATGGTTGCTTTATC+AGG | 0.263605 | 7.4:-32116226 | MS.gene87055:intron |
TGCCAATGCAATGTTCAAAA+TGG | 0.285347 | 7.4:-32115613 | MS.gene87055:CDS |
ATTAAGTTGGACTGTTCAAT+TGG | 0.366944 | 7.4:-32116362 | MS.gene87055:CDS |
AATCAACTCTGAAGCTTAAC+GGG | 0.388194 | 7.4:+32115637 | None:intergenic |
TGATAAAGCAACCATTTCTC+TGG | 0.394331 | 7.4:+32116228 | None:intergenic |
CAAGAACTTGCAAAACCAAA+AGG | 0.408404 | 7.4:-32115733 | MS.gene87055:CDS |
TGTGGGTAATGAGGCTCGCA+TGG | 0.410310 | 7.4:-32118067 | None:intergenic |
AAATCAACTCTGAAGCTTAA+CGG | 0.414400 | 7.4:+32115636 | None:intergenic |
CAGAGTGAAAGAGACCCTTT+TGG | 0.418681 | 7.4:+32115718 | None:intergenic |
CCTCTCAGTGAATTAGCGTT+TGG | 0.433794 | 7.4:+32116861 | None:intergenic |
CAGCACAAGAGACAGTATTA+GGG | 0.445413 | 7.4:+32116793 | None:intergenic |
TTCAGCTTGGTGGATTAAGT+TGG | 0.448493 | 7.4:-32116375 | MS.gene87055:intron |
GTGGGTAATGAGGCTCGCAT+GGG | 0.452143 | 7.4:-32118066 | None:intergenic |
AGGTTTCACACCCAGAGAAA+TGG | 0.454533 | 7.4:-32116239 | MS.gene87055:CDS |
ATTATAGGATCACACACAAT+TGG | 0.458297 | 7.4:-32115918 | MS.gene87055:intron |
TTGAACACATTTCAGCTTGG+TGG | 0.461899 | 7.4:-32116385 | MS.gene87055:intron |
TGTTCTGAAGAATCTACAAC+TGG | 0.463346 | 7.4:+32115890 | None:intergenic |
GGACTGTTCAATTGGGAAGA+AGG | 0.475208 | 7.4:-32116354 | MS.gene87055:CDS |
TTGCTTGAACAAAACAATCA+TGG | 0.477022 | 7.4:+32118019 | None:intergenic |
CAATCAAGTTGTCCTAGAAC+AGG | 0.479190 | 7.4:-32115819 | MS.gene87055:CDS |
AACTCAGATTTACCTGGTCC+TGG | 0.486375 | 7.4:-32116301 | MS.gene87055:CDS |
GACTGTTCAATTGGGAAGAA+GGG | 0.500140 | 7.4:-32116353 | MS.gene87055:CDS |
CATAAAGAGAAAGAAGAGAA+AGG | 0.502834 | 7.4:+32117987 | None:intergenic |
TGGGTAATGAGGCTCGCATG+GGG | 0.513057 | 7.4:-32118065 | None:intergenic |
AGAAAGAAGAGAAAGGTGAA+AGG | 0.521281 | 7.4:+32117994 | None:intergenic |
TTAAGTTGGACTGTTCAATT+GGG | 0.540125 | 7.4:-32116361 | MS.gene87055:CDS |
AAGAACTTGCAAAACCAAAA+GGG | 0.543758 | 7.4:-32115732 | MS.gene87055:CDS |
ATGTTCAAAATGGCGAACCT+TGG | 0.559997 | 7.4:-32115603 | MS.gene87055:CDS |
AGCTGAACTTAAACTTGCTG+TGG | 0.570672 | 7.4:+32116324 | None:intergenic |
CTTAGATCAGAACCAGGACC+AGG | 0.571660 | 7.4:+32116289 | None:intergenic |
GTCAAATGTTTCTGGAGTGG+TGG | 0.573382 | 7.4:+32115767 | None:intergenic |
CACAAGTTAATTCTTACGCT+AGG | 0.574958 | 7.4:-32115662 | MS.gene87055:CDS |
TTGTGCTGATATTCTTGCTG+TGG | 0.577386 | 7.4:-32116778 | MS.gene87055:CDS |
GTTGTAGATTCTTCAGAACA+AGG | 0.591250 | 7.4:-32115887 | MS.gene87055:CDS |
GATAAAGCAACCATTTCTCT+GGG | 0.594650 | 7.4:+32116229 | None:intergenic |
GACCACTAGACCCCGTGAGG+GGG | 0.599802 | 7.4:+32115580 | None:intergenic |
GGTCCTGGTTCTGATCTAAG+TGG | 0.604228 | 7.4:-32116286 | MS.gene87055:CDS |
TCAGCTAACTCAGATTTACC+TGG | 0.606201 | 7.4:-32116307 | MS.gene87055:CDS |
TGACCACTAGACCCCGTGAG+GGG | 0.610130 | 7.4:+32115579 | None:intergenic |
TTGACCACTAGACCCCGTGA+GGG | 0.633592 | 7.4:+32115578 | None:intergenic |
TCTGGAGTGGTGGTGTCAAG+TGG | 0.639332 | 7.4:+32115777 | None:intergenic |
TCAAGTTGTCCTAGAACAGG+TGG | 0.655848 | 7.4:-32115816 | MS.gene87055:CDS |
ATTGTCAAATGTTTCTGGAG+TGG | 0.657575 | 7.4:+32115764 | None:intergenic |
ATGTATACTTACAGCAACCA+CGG | 0.659916 | 7.4:+32116743 | None:intergenic |
GGGTAATGAGGCTCGCATGG+GGG | 0.661252 | 7.4:-32118064 | None:intergenic |
AGACCACTTAGATCAGAACC+AGG | 0.679668 | 7.4:+32116283 | None:intergenic |
TGTGGCAGCAAGAGATTCCG+TGG | 0.685059 | 7.4:-32116760 | MS.gene87055:CDS |
CTTGACCACTAGACCCCGTG+AGG | 0.696773 | 7.4:+32115577 | None:intergenic |
CCAAACGCTAATTCACTGAG+AGG | 0.719965 | 7.4:-32116861 | MS.gene87055:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATAATAATTTATAATTCAT+CGG | - | chr7.4:32116943-32116962 | MS.gene87055:intron | 10.0% |
!! | TTAATTTCTAAATAATATGT+AGG | - | chr7.4:32115710-32115729 | MS.gene87055:CDS | 10.0% |
!!! | AAACAAATGTTTTTTTTTTT+TGG | + | chr7.4:32116435-32116454 | None:intergenic | 10.0% |
!!! | AATAGAGATAATTATTTTTA+AGG | + | chr7.4:32116634-32116653 | None:intergenic | 10.0% |
!!! | TTTGAACAAAAAATTAATTT+TGG | - | chr7.4:32116371-32116390 | MS.gene87055:CDS | 10.0% |
!! | AAAGAGAAAAAAAAATTGAA+TGG | - | chr7.4:32116148-32116167 | MS.gene87055:intron | 15.0% |
!! | AACTAACTTTATTGTATTAT+AGG | - | chr7.4:32117674-32117693 | MS.gene87055:intron | 15.0% |
!! | TAATAAATAAATCAACTAGT+TGG | + | chr7.4:32116487-32116506 | None:intergenic | 15.0% |
!! | TTTAGTTAAAATAATGTGTA+GGG | + | chr7.4:32116347-32116366 | None:intergenic | 15.0% |
!!! | AAGTCAAAAAAATTCTTTTA+GGG | - | chr7.4:32116892-32116911 | MS.gene87055:intron | 15.0% |
!!! | TTAAGTTTAAAATTATGCAT+TGG | + | chr7.4:32115818-32115837 | None:intergenic | 15.0% |
!! | AAAAAAAAAATCTGTGATGA+TGG | - | chr7.4:32117001-32117020 | MS.gene87055:intron | 20.0% |
!! | ACCCTAGTAATAATAAAATT+AGG | + | chr7.4:32117584-32117603 | None:intergenic | 20.0% |
!! | ATAGTGCAAATATTCTAAAT+AGG | - | chr7.4:32115980-32115999 | MS.gene87055:intron | 20.0% |
!! | CCCTAGTAATAATAAAATTA+GGG | + | chr7.4:32117583-32117602 | None:intergenic | 20.0% |
!! | CTTTAGTTAAAATAATGTGT+AGG | + | chr7.4:32116348-32116367 | None:intergenic | 20.0% |
!! | GTATAACTCTACTAAAAATT+TGG | + | chr7.4:32117086-32117105 | None:intergenic | 20.0% |
!! | TATTGTTTAATCCATATGTA+TGG | + | chr7.4:32116220-32116239 | None:intergenic | 20.0% |
!! | TTAGTTAAAATAATGTGTAG+GGG | + | chr7.4:32116346-32116365 | None:intergenic | 20.0% |
!! | TTTAACTGTAAAATCTTTGT+TGG | + | chr7.4:32117460-32117479 | None:intergenic | 20.0% |
!!! | ACCCTAATTTTATTATTACT+AGG | - | chr7.4:32117579-32117598 | MS.gene87055:intron | 20.0% |
!!! | AGATTTTACAGTTAAAGAAT+TGG | - | chr7.4:32117464-32117483 | MS.gene87055:intron | 20.0% |
!!! | ATCAATGCTTTTAACAATAA+AGG | - | chr7.4:32117348-32117367 | MS.gene87055:intron | 20.0% |
!!! | ATTTTGGCACTAAATAATAA+TGG | - | chr7.4:32116387-32116406 | MS.gene87055:intron | 20.0% |
!!! | CAAGTCAAAAAAATTCTTTT+AGG | - | chr7.4:32116891-32116910 | MS.gene87055:intron | 20.0% |
!!! | CCCTAATTTTATTATTACTA+GGG | - | chr7.4:32117580-32117599 | MS.gene87055:intron | 20.0% |
!!! | TTTTATTATTACTAGGGTTT+AGG | - | chr7.4:32117586-32117605 | MS.gene87055:intron | 20.0% |
! | AATACGTAATCTATACAAAC+AGG | - | chr7.4:32116978-32116997 | MS.gene87055:intron | 25.0% |
! | ATAATGGCTAAAACTAAAAG+TGG | - | chr7.4:32116403-32116422 | MS.gene87055:intron | 25.0% |
! | CTAAATAGGTCAAGTAATAT+GGG | - | chr7.4:32115994-32116013 | MS.gene87055:intron | 25.0% |
! | GAGAAAAAAAAATTGAATGG+TGG | - | chr7.4:32116151-32116170 | MS.gene87055:intron | 25.0% |
! | GTCAAGTTAGAAAAAATTGT+AGG | - | chr7.4:32118047-32118066 | MS.gene87055:CDS | 25.0% |
! | TCTAAATAGGTCAAGTAATA+TGG | - | chr7.4:32115993-32116012 | MS.gene87055:intron | 25.0% |
! | TGATATGAAAACTGGATAAA+CGG | + | chr7.4:32117623-32117642 | None:intergenic | 25.0% |
!!! | AGAATTAACTTGTGATTTTG+TGG | + | chr7.4:32117939-32117958 | None:intergenic | 25.0% |
!!! | CCATACACGTTTTTTTTTTA+GGG | - | chr7.4:32116662-32116681 | MS.gene87055:intron | 25.0% |
!!! | TCCATACACGTTTTTTTTTT+AGG | - | chr7.4:32116661-32116680 | MS.gene87055:intron | 25.0% |
AAGAACTTGCAAAACCAAAA+GGG | - | chr7.4:32117875-32117894 | MS.gene87055:intron | 30.0% | |
ATATTGAACACATTTCAGCT+TGG | - | chr7.4:32117219-32117238 | MS.gene87055:intron | 30.0% | |
ATTATAGGATCACACACAAT+TGG | - | chr7.4:32117689-32117708 | MS.gene87055:intron | 30.0% | |
CATAAAGAGAAAGAAGAGAA+AGG | + | chr7.4:32115623-32115642 | None:intergenic | 30.0% | |
CCCTAAAAAAAAAACGTGTA+TGG | + | chr7.4:32116665-32116684 | None:intergenic | 30.0% | |
GTTTAATCCATATGTATGGA+CGG | + | chr7.4:32116216-32116235 | None:intergenic | 30.0% | |
TAATCGGATGATATGAAAAC+TGG | + | chr7.4:32117631-32117650 | None:intergenic | 30.0% | |
TATGCATTGTCAAATGTTTC+TGG | + | chr7.4:32117851-32117870 | None:intergenic | 30.0% | |
TCAACTAGGTCAAGTAATAT+GGG | + | chr7.4:32115781-32115800 | None:intergenic | 30.0% | |
TCATGCTTAGTTAACTTCTT+TGG | - | chr7.4:32116534-32116553 | MS.gene87055:intron | 30.0% | |
TGAGAATGAGACATGTTAAT+CGG | + | chr7.4:32117647-32117666 | None:intergenic | 30.0% | |
TGGTCACAAAGTTTAGATTT+AGG | - | chr7.4:32117124-32117143 | MS.gene87055:intron | 30.0% | |
TTGCTTGAACAAAACAATCA+TGG | + | chr7.4:32115591-32115610 | None:intergenic | 30.0% | |
!! | AAATCAACTCTGAAGCTTAA+CGG | + | chr7.4:32117974-32117993 | None:intergenic | 30.0% |
!! | ATTAAGTTGGACTGTTCAAT+TGG | - | chr7.4:32117245-32117264 | MS.gene87055:intron | 30.0% |
!! | ATTTGTATGACTTTTGAGTG+AGG | - | chr7.4:32116118-32116137 | MS.gene87055:intron | 30.0% |
!! | TTAAGTTGGACTGTTCAATT+GGG | - | chr7.4:32117246-32117265 | MS.gene87055:intron | 30.0% |
AGAAAGAAGAGAAAGGTGAA+AGG | + | chr7.4:32115616-32115635 | None:intergenic | 35.0% | |
ATAGGTCAAGTAATATGGGA+CGG | - | chr7.4:32115998-32116017 | MS.gene87055:intron | 35.0% | |
ATGTATACTTACAGCAACCA+CGG | + | chr7.4:32116867-32116886 | None:intergenic | 35.0% | |
CAAGAACTTGCAAAACCAAA+AGG | - | chr7.4:32117874-32117893 | MS.gene87055:intron | 35.0% | |
CACAAGTTAATTCTTACGCT+AGG | - | chr7.4:32117945-32117964 | MS.gene87055:intron | 35.0% | |
GATAAAGCAACCATTTCTCT+GGG | + | chr7.4:32117381-32117400 | None:intergenic | 35.0% | |
GTAGAGTTATACACTAGAGA+AGG | - | chr7.4:32117094-32117113 | MS.gene87055:intron | 35.0% | |
GTCAACTAGGTCAAGTAATA+TGG | + | chr7.4:32115782-32115801 | None:intergenic | 35.0% | |
GTTGTAGATTCTTCAGAACA+AGG | - | chr7.4:32117720-32117739 | MS.gene87055:intron | 35.0% | |
TAAGGTCCACTTAAATCAAG+AGG | + | chr7.4:32117425-32117444 | None:intergenic | 35.0% | |
TGATAAAGCAACCATTTCTC+TGG | + | chr7.4:32117382-32117401 | None:intergenic | 35.0% | |
TGCCAATGCAATGTTCAAAA+TGG | - | chr7.4:32117994-32118013 | MS.gene87055:CDS | 35.0% | |
TGTTGGAGAAAGCAGTAATA+AGG | + | chr7.4:32117443-32117462 | None:intergenic | 35.0% | |
TTGTGATGCATCAGTACTAT+TGG | - | chr7.4:32116685-32116704 | MS.gene87055:intron | 35.0% | |
TTTAAATCACCACCTGTTCT+AGG | + | chr7.4:32117803-32117822 | None:intergenic | 35.0% | |
! | ACACTAGAGAAGGTCTTATA+TGG | - | chr7.4:32117104-32117123 | MS.gene87055:intron | 35.0% |
! | AGAGAAATGGTTGCTTTATC+AGG | - | chr7.4:32117381-32117400 | MS.gene87055:intron | 35.0% |
! | TTTTACACCGTCCATACATA+TGG | - | chr7.4:32116206-32116225 | MS.gene87055:intron | 35.0% |
!! | AATCAACTCTGAAGCTTAAC+GGG | + | chr7.4:32117973-32117992 | None:intergenic | 35.0% |
!! | ATTGTCAAATGTTTCTGGAG+TGG | + | chr7.4:32117846-32117865 | None:intergenic | 35.0% |
!! | TGTTCTGAAGAATCTACAAC+TGG | + | chr7.4:32117720-32117739 | None:intergenic | 35.0% |
ATGTTCAAAATGGCGAACCT+TGG | - | chr7.4:32118004-32118023 | MS.gene87055:CDS | 40.0% | |
CAGCACAAGAGACAGTATTA+GGG | + | chr7.4:32116817-32116836 | None:intergenic | 40.0% | |
CTACCTCCTCTTGATTTAAG+TGG | - | chr7.4:32117416-32117435 | MS.gene87055:intron | 40.0% | |
CTAGGTCAAGTAATATGGGA+TGG | + | chr7.4:32115777-32115796 | None:intergenic | 40.0% | |
GACGATACATCAAGTTTCAC+AGG | - | chr7.4:32116707-32116726 | MS.gene87055:intron | 40.0% | |
GACTGTTCAATTGGGAAGAA+GGG | - | chr7.4:32117254-32117273 | MS.gene87055:intron | 40.0% | |
GTCAAGTAATATGGGATGGA+GGG | + | chr7.4:32115773-32115792 | None:intergenic | 40.0% | |
TCAGCACAAGAGACAGTATT+AGG | + | chr7.4:32116818-32116837 | None:intergenic | 40.0% | |
TCAGCTAACTCAGATTTACC+TGG | - | chr7.4:32117300-32117319 | MS.gene87055:intron | 40.0% | |
TTCACAGGTGAAAAATCAGC+AGG | - | chr7.4:32116722-32116741 | MS.gene87055:intron | 40.0% | |
TTGAACACATTTCAGCTTGG+TGG | - | chr7.4:32117222-32117241 | MS.gene87055:intron | 40.0% | |
! | CAATCAAGTTGTCCTAGAAC+AGG | - | chr7.4:32117788-32117807 | MS.gene87055:intron | 40.0% |
! | TTGTGCTGATATTCTTGCTG+TGG | - | chr7.4:32116829-32116848 | MS.gene87055:CDS | 40.0% |
!! | AGCTGAACTTAAACTTGCTG+TGG | + | chr7.4:32117286-32117305 | None:intergenic | 40.0% |
!! | CGCCATTTTGAACATTGCAT+TGG | + | chr7.4:32117999-32118018 | None:intergenic | 40.0% |
!! | TTCAGCTTGGTGGATTAAGT+TGG | - | chr7.4:32117232-32117251 | MS.gene87055:intron | 40.0% |
AACTCAGATTTACCTGGTCC+TGG | - | chr7.4:32117306-32117325 | MS.gene87055:intron | 45.0% | |
AGACCACTTAGATCAGAACC+AGG | + | chr7.4:32117327-32117346 | None:intergenic | 45.0% | |
AGGTTTCACACCCAGAGAAA+TGG | - | chr7.4:32117368-32117387 | MS.gene87055:intron | 45.0% | |
CATACGTGACAGAGTCAACT+AGG | + | chr7.4:32115795-32115814 | None:intergenic | 45.0% | |
CCAAACGCTAATTCACTGAG+AGG | - | chr7.4:32116746-32116765 | MS.gene87055:intron | 45.0% | |
CCTCTCAGTGAATTAGCGTT+TGG | + | chr7.4:32116749-32116768 | None:intergenic | 45.0% | |
GGACTGTTCAATTGGGAAGA+AGG | - | chr7.4:32117253-32117272 | MS.gene87055:intron | 45.0% | |
GGTCAAGTAATATGGGATGG+AGG | + | chr7.4:32115774-32115793 | None:intergenic | 45.0% | |
GGTCCACTTAAATCAAGAGG+AGG | + | chr7.4:32117422-32117441 | None:intergenic | 45.0% | |
GTCAAGTAATATGGGACGGA+GGG | - | chr7.4:32116002-32116021 | MS.gene87055:intron | 45.0% | |
! | CAGAGTGAAAGAGACCCTTT+TGG | + | chr7.4:32117892-32117911 | None:intergenic | 45.0% |
! | TCAAGTTGTCCTAGAACAGG+TGG | - | chr7.4:32117791-32117810 | MS.gene87055:intron | 45.0% |
!! | GTCAAATGTTTCTGGAGTGG+TGG | + | chr7.4:32117843-32117862 | None:intergenic | 45.0% |
CTTAGATCAGAACCAGGACC+AGG | + | chr7.4:32117321-32117340 | None:intergenic | 50.0% | |
GGTCAAGTAATATGGGACGG+AGG | - | chr7.4:32116001-32116020 | MS.gene87055:intron | 50.0% | |
!! | GGACGGAGGGAGTATGTTTT+AGG | - | chr7.4:32116015-32116034 | MS.gene87055:intron | 50.0% |
!! | GGTCCTGGTTCTGATCTAAG+TGG | - | chr7.4:32117321-32117340 | MS.gene87055:intron | 50.0% |
TAGTGTGCGCGTGTGTGCAT+GGG | + | chr7.4:32116079-32116098 | None:intergenic | 55.0% | |
TGTGGCAGCAAGAGATTCCG+TGG | - | chr7.4:32116847-32116866 | MS.gene87055:CDS | 55.0% | |
TTAGTGTGCGCGTGTGTGCA+TGG | + | chr7.4:32116080-32116099 | None:intergenic | 55.0% | |
TTGACCACTAGACCCCGTGA+GGG | + | chr7.4:32118032-32118051 | None:intergenic | 55.0% | |
! | TCTGGAGTGGTGGTGTCAAG+TGG | + | chr7.4:32117833-32117852 | None:intergenic | 55.0% |
CTTGACCACTAGACCCCGTG+AGG | + | chr7.4:32118033-32118052 | None:intergenic | 60.0% | |
TGACCACTAGACCCCGTGAG+GGG | + | chr7.4:32118031-32118050 | None:intergenic | 60.0% | |
GACCACTAGACCCCGTGAGG+GGG | + | chr7.4:32118030-32118049 | None:intergenic | 65.0% | |
CGAACCTTGGCCCCCTCACG+GGG | - | chr7.4:32118017-32118036 | MS.gene87055:CDS | 70.0% | |
GCGAACCTTGGCCCCCTCAC+GGG | - | chr7.4:32118016-32118035 | MS.gene87055:CDS | 70.0% | |
GGCGAACCTTGGCCCCCTCA+CGG | - | chr7.4:32118015-32118034 | MS.gene87055:CDS | 70.0% | |
TAGACCCCGTGAGGGGGCCA+AGG | + | chr7.4:32118024-32118043 | None:intergenic | 70.0% | |
GGCCCCCTCACGGGGTCTAG+TGG | - | chr7.4:32118025-32118044 | MS.gene87055:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 32115548 | 32118081 | 32115548 | ID=MS.gene87055 |
chr7.4 | mRNA | 32115548 | 32118081 | 32115548 | ID=MS.gene87055.t1;Parent=MS.gene87055 |
chr7.4 | exon | 32117988 | 32118081 | 32117988 | ID=MS.gene87055.t1.exon1;Parent=MS.gene87055.t1 |
chr7.4 | CDS | 32117988 | 32118081 | 32117988 | ID=cds.MS.gene87055.t1;Parent=MS.gene87055.t1 |
chr7.4 | exon | 32116755 | 32116900 | 32116755 | ID=MS.gene87055.t1.exon2;Parent=MS.gene87055.t1 |
chr7.4 | CDS | 32116755 | 32116900 | 32116755 | ID=cds.MS.gene87055.t1;Parent=MS.gene87055.t1 |
chr7.4 | exon | 32116227 | 32116392 | 32116227 | ID=MS.gene87055.t1.exon3;Parent=MS.gene87055.t1 |
chr7.4 | CDS | 32116227 | 32116392 | 32116227 | ID=cds.MS.gene87055.t1;Parent=MS.gene87055.t1 |
chr7.4 | exon | 32115548 | 32115933 | 32115548 | ID=MS.gene87055.t1.exon4;Parent=MS.gene87055.t1 |
chr7.4 | CDS | 32115548 | 32115933 | 32115548 | ID=cds.MS.gene87055.t1;Parent=MS.gene87055.t1 |
Gene Sequence |
Protein sequence |