Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87549.t1 | XP_003604981.2 | 76.3 | 518 | 121 | 2 | 85 | 602 | 502 | 1017 | 2.90E-179 | 638.6 |
MS.gene87549.t1 | XP_003604981.2 | 83.5 | 103 | 15 | 1 | 1 | 101 | 1 | 103 | 1.90E-37 | 167.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87549.t1 | Q7XA42 | 27.1 | 266 | 152 | 12 | 268 | 505 | 633 | 884 | 1.7e-07 | 59.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87549.t1 | G7JUK4 | 76.3 | 518 | 121 | 2 | 85 | 602 | 502 | 1017 | 2.1e-179 | 638.6 |
MS.gene87549.t1 | G7JUK4 | 83.5 | 103 | 15 | 1 | 1 | 101 | 1 | 103 | 1.4e-37 | 167.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049378 | MS.gene87549 | 0.804439 | 2.16E-49 | -1.69E-46 |
MS.gene050228 | MS.gene87549 | 0.810274 | 1.25E-50 | -1.69E-46 |
MS.gene050442 | MS.gene87549 | 0.806282 | 8.87E-50 | -1.69E-46 |
MS.gene050750 | MS.gene87549 | 0.80371 | 3.06E-49 | -1.69E-46 |
MS.gene050820 | MS.gene87549 | 0.821007 | 5.08E-53 | -1.69E-46 |
MS.gene050953 | MS.gene87549 | 0.802252 | 6.13E-49 | -1.69E-46 |
MS.gene051860 | MS.gene87549 | 0.816429 | 5.56E-52 | -1.69E-46 |
MS.gene053584 | MS.gene87549 | 0.83313 | 6.36E-56 | -1.69E-46 |
MS.gene053836 | MS.gene87549 | 0.803604 | 3.22E-49 | -1.69E-46 |
MS.gene054183 | MS.gene87549 | 0.822234 | 2.64E-53 | -1.69E-46 |
MS.gene055356 | MS.gene87549 | 0.813993 | 1.93E-51 | -1.69E-46 |
MS.gene055358 | MS.gene87549 | 0.805379 | 1.37E-49 | -1.69E-46 |
MS.gene055701 | MS.gene87549 | 0.816544 | 5.24E-52 | -1.69E-46 |
MS.gene058736 | MS.gene87549 | 0.813533 | 2.44E-51 | -1.69E-46 |
MS.gene059128 | MS.gene87549 | 0.815153 | 1.07E-51 | -1.69E-46 |
MS.gene061114 | MS.gene87549 | -0.806125 | 9.57E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87549.t1 | MTR_4g022480 | 77.027 | 518 | 117 | 2 | 85 | 602 | 502 | 1017 | 0.0 | 778 |
MS.gene87549.t1 | MTR_4g022480 | 82.692 | 104 | 16 | 1 | 1 | 102 | 1 | 104 | 1.79e-33 | 137 |
MS.gene87549.t1 | MTR_4g021690 | 74.419 | 516 | 128 | 3 | 87 | 602 | 506 | 1017 | 0.0 | 759 |
MS.gene87549.t1 | MTR_4g021690 | 81.553 | 103 | 19 | 0 | 1 | 103 | 1 | 103 | 2.38e-32 | 134 |
MS.gene87549.t1 | MTR_4g022540 | 76.448 | 518 | 116 | 2 | 85 | 602 | 503 | 1014 | 0.0 | 754 |
MS.gene87549.t1 | MTR_4g022540 | 81.731 | 104 | 17 | 1 | 1 | 102 | 1 | 104 | 1.66e-35 | 143 |
MS.gene87549.t1 | MTR_4g022460 | 74.615 | 520 | 130 | 2 | 87 | 606 | 505 | 1022 | 0.0 | 741 |
MS.gene87549.t1 | MTR_4g022460 | 83.495 | 103 | 17 | 0 | 1 | 103 | 1 | 103 | 2.00e-33 | 137 |
MS.gene87549.t1 | MTR_4g022560 | 75.000 | 512 | 127 | 1 | 87 | 597 | 504 | 1015 | 0.0 | 732 |
MS.gene87549.t1 | MTR_4g022560 | 77.670 | 103 | 23 | 0 | 1 | 103 | 1 | 103 | 7.98e-34 | 138 |
MS.gene87549.t1 | MTR_4g022960 | 71.042 | 518 | 119 | 1 | 85 | 602 | 477 | 963 | 0.0 | 696 |
MS.gene87549.t1 | MTR_4g022960 | 81.553 | 103 | 19 | 0 | 1 | 103 | 1 | 103 | 2.23e-35 | 143 |
MS.gene87549.t1 | MTR_4g022950 | 74.890 | 454 | 80 | 2 | 159 | 612 | 1 | 420 | 0.0 | 639 |
MS.gene87549.t1 | MTR_5g028340 | 32.281 | 570 | 326 | 14 | 89 | 610 | 483 | 1040 | 1.26e-62 | 224 |
MS.gene87549.t1 | MTR_5g028290 | 32.812 | 576 | 327 | 13 | 89 | 610 | 510 | 1079 | 2.77e-61 | 221 |
MS.gene87549.t1 | MTR_5g028420 | 32.642 | 579 | 324 | 14 | 89 | 610 | 478 | 1047 | 1.52e-58 | 213 |
MS.gene87549.t1 | MTR_5g028070 | 30.308 | 584 | 333 | 14 | 88 | 609 | 624 | 1195 | 1.82e-55 | 204 |
MS.gene87549.t1 | MTR_5g028750 | 30.849 | 577 | 334 | 12 | 89 | 610 | 468 | 1034 | 3.73e-55 | 202 |
MS.gene87549.t1 | MTR_2g078070 | 30.192 | 573 | 328 | 17 | 85 | 605 | 515 | 1067 | 1.19e-50 | 189 |
MS.gene87549.t1 | MTR_5g028610 | 31.107 | 569 | 321 | 16 | 88 | 604 | 481 | 1030 | 3.84e-48 | 182 |
MS.gene87549.t1 | MTR_6g016430 | 28.381 | 525 | 332 | 14 | 103 | 605 | 522 | 1024 | 2.16e-43 | 167 |
MS.gene87549.t1 | MTR_6g046480 | 31.850 | 427 | 248 | 16 | 171 | 583 | 567 | 964 | 2.35e-38 | 152 |
MS.gene87549.t1 | MTR_8g038590 | 32.057 | 418 | 252 | 15 | 79 | 481 | 513 | 913 | 2.61e-38 | 152 |
MS.gene87549.t1 | MTR_3g015280 | 41.176 | 289 | 150 | 10 | 91 | 376 | 506 | 777 | 1.73e-37 | 149 |
MS.gene87549.t1 | MTR_5g072340 | 30.112 | 445 | 283 | 14 | 163 | 603 | 568 | 988 | 2.16e-37 | 149 |
MS.gene87549.t1 | MTR_5g071800 | 29.490 | 529 | 313 | 20 | 91 | 605 | 509 | 991 | 2.90e-37 | 149 |
MS.gene87549.t1 | MTR_3g022790 | 29.709 | 515 | 289 | 24 | 90 | 581 | 512 | 976 | 4.22e-37 | 148 |
MS.gene87549.t1 | MTR_5g035480 | 31.111 | 450 | 257 | 18 | 156 | 578 | 551 | 974 | 5.32e-37 | 148 |
MS.gene87549.t1 | MTR_3g015550 | 37.048 | 332 | 170 | 9 | 91 | 398 | 506 | 822 | 6.30e-37 | 147 |
MS.gene87549.t1 | MTR_3g015550 | 38.562 | 306 | 153 | 8 | 91 | 376 | 543 | 833 | 7.50e-37 | 147 |
MS.gene87549.t1 | MTR_4g050790 | 39.394 | 297 | 154 | 8 | 91 | 376 | 506 | 787 | 9.88e-37 | 147 |
MS.gene87549.t1 | MTR_4g050790 | 38.017 | 121 | 71 | 2 | 3 | 123 | 2 | 118 | 1.08e-14 | 78.2 |
MS.gene87549.t1 | MTR_6g052455 | 30.495 | 505 | 276 | 20 | 111 | 582 | 404 | 866 | 1.08e-36 | 147 |
MS.gene87549.t1 | MTR_3g015560 | 40.580 | 276 | 132 | 8 | 117 | 373 | 528 | 790 | 6.84e-36 | 144 |
MS.gene87549.t1 | MTR_3g015560 | 46.018 | 113 | 49 | 3 | 3 | 105 | 2 | 112 | 5.59e-11 | 66.2 |
MS.gene87549.t1 | MTR_6g052760 | 31.250 | 448 | 247 | 17 | 163 | 582 | 563 | 977 | 2.19e-35 | 143 |
MS.gene87549.t1 | MTR_3g018980 | 28.285 | 548 | 307 | 20 | 85 | 581 | 511 | 1023 | 7.13e-35 | 141 |
MS.gene87549.t1 | MTR_6g016420 | 28.261 | 506 | 322 | 14 | 120 | 605 | 516 | 1000 | 7.76e-35 | 141 |
MS.gene87549.t1 | MTR_7g021000 | 28.651 | 541 | 320 | 20 | 90 | 604 | 506 | 1006 | 2.05e-34 | 140 |
MS.gene87549.t1 | MTR_5g070490 | 28.636 | 440 | 283 | 13 | 172 | 605 | 571 | 985 | 2.42e-34 | 140 |
MS.gene87549.t1 | MTR_8g043600 | 59.350 | 123 | 50 | 0 | 90 | 212 | 435 | 557 | 4.47e-34 | 137 |
MS.gene87549.t1 | MTR_3g018980 | 30.118 | 425 | 250 | 16 | 85 | 496 | 511 | 901 | 8.24e-34 | 138 |
MS.gene87549.t1 | MTR_4g055630 | 29.935 | 461 | 281 | 15 | 172 | 605 | 577 | 1022 | 8.27e-34 | 138 |
MS.gene87549.t1 | MTR_5g071470 | 30.283 | 459 | 282 | 15 | 150 | 602 | 559 | 985 | 8.78e-34 | 138 |
MS.gene87549.t1 | MTR_5g070960 | 29.605 | 456 | 277 | 15 | 173 | 602 | 577 | 1014 | 1.04e-33 | 138 |
MS.gene87549.t1 | MTR_7g071940 | 28.855 | 454 | 285 | 14 | 172 | 602 | 566 | 1004 | 1.04e-33 | 138 |
MS.gene87549.t1 | MTR_6g016420 | 28.400 | 500 | 308 | 12 | 120 | 603 | 516 | 981 | 1.25e-33 | 137 |
MS.gene87549.t1 | MTR_0137s0010 | 35.034 | 294 | 176 | 10 | 87 | 373 | 53 | 338 | 3.34e-33 | 135 |
MS.gene87549.t1 | MTR_6g046130 | 30.896 | 424 | 255 | 14 | 171 | 583 | 564 | 960 | 4.76e-33 | 136 |
MS.gene87549.t1 | MTR_3g071130 | 26.609 | 575 | 307 | 17 | 120 | 600 | 530 | 1083 | 4.82e-33 | 136 |
MS.gene87549.t1 | MTR_3g014040 | 36.704 | 267 | 154 | 10 | 114 | 373 | 526 | 784 | 1.23e-32 | 135 |
MS.gene87549.t1 | MTR_3g071070 | 26.957 | 575 | 305 | 18 | 120 | 600 | 325 | 878 | 2.01e-32 | 134 |
MS.gene87549.t1 | MTR_0603s0010 | 28.270 | 474 | 271 | 18 | 149 | 609 | 632 | 1049 | 2.09e-32 | 134 |
MS.gene87549.t1 | MTR_1g037610 | 27.778 | 540 | 335 | 22 | 85 | 603 | 511 | 1016 | 2.38e-32 | 134 |
MS.gene87549.t1 | MTR_5g071670 | 27.891 | 441 | 291 | 12 | 166 | 602 | 561 | 978 | 2.60e-32 | 134 |
MS.gene87549.t1 | MTR_1g022380 | 27.172 | 541 | 326 | 17 | 91 | 602 | 505 | 1006 | 3.43e-32 | 133 |
MS.gene87549.t1 | MTR_6g046570 | 29.577 | 497 | 266 | 20 | 163 | 604 | 565 | 1032 | 3.52e-32 | 133 |
MS.gene87549.t1 | MTR_8g038570 | 31.139 | 395 | 250 | 12 | 88 | 475 | 526 | 905 | 4.47e-32 | 133 |
MS.gene87549.t1 | MTR_3g015500 | 37.716 | 289 | 150 | 8 | 91 | 376 | 544 | 805 | 9.22e-32 | 132 |
MS.gene87549.t1 | MTR_3g015500 | 38.843 | 121 | 70 | 2 | 3 | 123 | 40 | 156 | 8.08e-16 | 81.6 |
MS.gene87549.t1 | MTR_5g071310 | 29.245 | 424 | 268 | 15 | 164 | 581 | 534 | 931 | 1.06e-31 | 132 |
MS.gene87549.t1 | MTR_6g046620 | 28.545 | 536 | 298 | 20 | 130 | 604 | 470 | 981 | 1.44e-31 | 131 |
MS.gene87549.t1 | MTR_8g446950 | 31.889 | 323 | 194 | 11 | 149 | 460 | 595 | 902 | 1.68e-31 | 131 |
MS.gene87549.t1 | MTR_3g070590 | 27.542 | 541 | 303 | 18 | 120 | 600 | 530 | 1041 | 1.72e-31 | 131 |
MS.gene87549.t1 | MTR_5g040770 | 29.307 | 505 | 287 | 20 | 143 | 605 | 318 | 794 | 1.85e-31 | 130 |
MS.gene87549.t1 | MTR_3g014360 | 28.119 | 537 | 312 | 26 | 85 | 606 | 496 | 973 | 2.09e-31 | 131 |
MS.gene87549.t1 | MTR_3g027420 | 28.814 | 531 | 320 | 21 | 90 | 581 | 505 | 1016 | 2.34e-31 | 130 |
MS.gene87549.t1 | MTR_3g032800 | 26.716 | 539 | 336 | 20 | 75 | 585 | 496 | 1003 | 2.77e-31 | 130 |
MS.gene87549.t1 | MTR_0425s0020 | 28.044 | 542 | 327 | 25 | 83 | 603 | 514 | 1013 | 3.64e-31 | 130 |
MS.gene87549.t1 | MTR_3g034380 | 27.032 | 529 | 336 | 21 | 89 | 596 | 516 | 1015 | 4.54e-31 | 130 |
MS.gene87549.t1 | MTR_3g027250 | 27.339 | 545 | 327 | 19 | 90 | 588 | 503 | 1024 | 4.89e-31 | 130 |
MS.gene87549.t1 | MTR_3g015260 | 27.471 | 597 | 337 | 28 | 71 | 602 | 501 | 1066 | 6.66e-31 | 129 |
MS.gene87549.t1 | MTR_5g035530 | 29.645 | 479 | 275 | 19 | 169 | 611 | 461 | 913 | 7.34e-31 | 129 |
MS.gene87549.t1 | MTR_3g033860 | 28.224 | 535 | 325 | 23 | 89 | 597 | 516 | 1017 | 7.43e-31 | 129 |
MS.gene87549.t1 | MTR_0256s0050 | 26.476 | 593 | 299 | 19 | 91 | 578 | 475 | 1035 | 8.03e-31 | 129 |
MS.gene87549.t1 | MTR_0230s0010 | 29.449 | 472 | 264 | 17 | 150 | 581 | 475 | 917 | 1.39e-30 | 128 |
MS.gene87549.t1 | MTR_0133s0030 | 29.306 | 447 | 258 | 17 | 164 | 583 | 560 | 975 | 2.04e-30 | 128 |
MS.gene87549.t1 | MTR_5g072140 | 29.099 | 433 | 265 | 17 | 164 | 573 | 527 | 940 | 2.06e-30 | 127 |
MS.gene87549.t1 | MTR_3g032200 | 27.094 | 561 | 332 | 25 | 75 | 597 | 500 | 1021 | 2.26e-30 | 127 |
MS.gene87549.t1 | MTR_6g046930 | 30.837 | 454 | 263 | 18 | 171 | 598 | 563 | 991 | 2.41e-30 | 127 |
MS.gene87549.t1 | MTR_7g021000 | 31.092 | 357 | 216 | 12 | 90 | 430 | 506 | 848 | 2.63e-30 | 127 |
MS.gene87549.t1 | MTR_5g037590 | 34.934 | 229 | 137 | 7 | 148 | 373 | 531 | 750 | 3.61e-30 | 127 |
MS.gene87549.t1 | MTR_3g020620 | 29.237 | 472 | 270 | 19 | 149 | 609 | 720 | 1138 | 3.82e-30 | 127 |
MS.gene87549.t1 | MTR_0133s0020 | 28.384 | 458 | 272 | 16 | 149 | 583 | 555 | 979 | 5.82e-30 | 126 |
MS.gene87549.t1 | MTR_3g036050 | 27.932 | 469 | 283 | 15 | 147 | 602 | 181 | 607 | 7.24e-30 | 126 |
MS.gene87549.t1 | MTR_5g071570 | 30.986 | 355 | 226 | 12 | 173 | 522 | 576 | 916 | 7.36e-30 | 126 |
MS.gene87549.t1 | MTR_3g026660 | 28.132 | 455 | 272 | 15 | 156 | 601 | 552 | 960 | 8.31e-30 | 126 |
MS.gene87549.t1 | MTR_3g026660 | 28.132 | 455 | 272 | 15 | 156 | 601 | 609 | 1017 | 1.15e-29 | 125 |
MS.gene87549.t1 | MTR_3g034460 | 27.004 | 474 | 295 | 20 | 147 | 596 | 553 | 999 | 1.30e-29 | 125 |
MS.gene87549.t1 | MTR_0144s0060 | 28.324 | 519 | 281 | 21 | 124 | 604 | 521 | 986 | 1.36e-29 | 125 |
MS.gene87549.t1 | MTR_0144s0060 | 35.602 | 191 | 95 | 6 | 143 | 314 | 963 | 1144 | 2.51e-18 | 90.1 |
MS.gene87549.t1 | MTR_3g022600 | 28.336 | 547 | 328 | 25 | 83 | 603 | 514 | 1022 | 1.83e-29 | 125 |
MS.gene87549.t1 | MTR_2g063777 | 27.477 | 535 | 267 | 22 | 121 | 598 | 546 | 1016 | 1.95e-29 | 125 |
MS.gene87549.t1 | MTR_3g015260 | 29.064 | 406 | 244 | 15 | 71 | 466 | 501 | 872 | 1.97e-29 | 124 |
MS.gene87549.t1 | MTR_6g047450 | 28.276 | 435 | 272 | 12 | 171 | 583 | 566 | 982 | 2.67e-29 | 124 |
MS.gene87549.t1 | MTR_3g022230 | 27.778 | 504 | 307 | 21 | 83 | 578 | 519 | 973 | 2.86e-29 | 124 |
MS.gene87549.t1 | MTR_3g014510 | 28.166 | 529 | 330 | 21 | 85 | 606 | 511 | 996 | 2.89e-29 | 124 |
MS.gene87549.t1 | MTR_3g014080 | 31.805 | 349 | 219 | 13 | 121 | 460 | 547 | 885 | 3.39e-29 | 124 |
MS.gene87549.t1 | MTR_3g014080 | 31.805 | 349 | 219 | 13 | 121 | 460 | 547 | 885 | 3.44e-29 | 124 |
MS.gene87549.t1 | MTR_3g035940 | 28.030 | 528 | 309 | 21 | 89 | 585 | 515 | 1002 | 5.81e-29 | 123 |
MS.gene87549.t1 | MTR_3g024460 | 33.793 | 290 | 170 | 12 | 90 | 373 | 122 | 395 | 6.48e-29 | 122 |
MS.gene87549.t1 | MTR_3g018930 | 25.979 | 562 | 359 | 19 | 71 | 604 | 501 | 1033 | 6.59e-29 | 123 |
MS.gene87549.t1 | MTR_3g435720 | 28.839 | 534 | 316 | 20 | 86 | 602 | 512 | 998 | 6.83e-29 | 123 |
MS.gene87549.t1 | MTR_3g023320 | 26.786 | 504 | 280 | 19 | 171 | 604 | 568 | 1052 | 7.53e-29 | 123 |
MS.gene87549.t1 | MTR_3g032500 | 28.269 | 520 | 290 | 21 | 141 | 607 | 567 | 1056 | 8.19e-29 | 123 |
MS.gene87549.t1 | MTR_5g037500 | 29.150 | 494 | 298 | 17 | 121 | 602 | 482 | 935 | 1.23e-28 | 122 |
MS.gene87549.t1 | MTR_3g020890 | 28.055 | 581 | 335 | 24 | 80 | 604 | 500 | 1053 | 1.48e-28 | 122 |
MS.gene87549.t1 | MTR_3g031940 | 26.025 | 561 | 353 | 22 | 75 | 604 | 500 | 1029 | 1.75e-28 | 122 |
MS.gene87549.t1 | MTR_3g014390 | 27.366 | 486 | 307 | 17 | 85 | 558 | 509 | 960 | 1.84e-28 | 122 |
MS.gene87549.t1 | MTR_1g047800 | 27.911 | 541 | 300 | 21 | 118 | 604 | 538 | 1042 | 1.85e-28 | 122 |
MS.gene87549.t1 | MTR_3g014320 | 27.119 | 531 | 338 | 23 | 85 | 603 | 511 | 1004 | 2.00e-28 | 122 |
MS.gene87549.t1 | MTR_5g037450 | 25.907 | 579 | 297 | 20 | 88 | 602 | 542 | 1052 | 3.06e-28 | 121 |
MS.gene87549.t1 | MTR_3g032370 | 29.466 | 543 | 307 | 25 | 92 | 598 | 516 | 1018 | 3.49e-28 | 121 |
MS.gene87549.t1 | MTR_8g030860 | 27.580 | 533 | 308 | 23 | 86 | 585 | 519 | 1006 | 3.71e-28 | 120 |
MS.gene87549.t1 | MTR_3g033080 | 29.952 | 414 | 241 | 17 | 86 | 475 | 511 | 899 | 5.74e-28 | 120 |
MS.gene87549.t1 | MTR_3g023030 | 29.843 | 382 | 233 | 13 | 96 | 466 | 525 | 882 | 6.93e-28 | 120 |
MS.gene87549.t1 | MTR_3g023030 | 29.843 | 382 | 233 | 13 | 96 | 466 | 491 | 848 | 7.56e-28 | 120 |
MS.gene87549.t1 | MTR_0137s0070 | 32.051 | 312 | 197 | 10 | 154 | 460 | 2 | 303 | 8.28e-28 | 119 |
MS.gene87549.t1 | MTR_0137s0070 | 32.051 | 312 | 197 | 10 | 154 | 460 | 2 | 303 | 1.10e-27 | 118 |
MS.gene87549.t1 | MTR_3g011620 | 28.544 | 522 | 292 | 21 | 149 | 602 | 576 | 1084 | 1.32e-27 | 119 |
MS.gene87549.t1 | MTR_0511s0020 | 29.200 | 500 | 271 | 21 | 111 | 582 | 513 | 957 | 1.34e-27 | 119 |
MS.gene87549.t1 | MTR_2g014840 | 30.941 | 404 | 251 | 15 | 80 | 477 | 505 | 886 | 1.68e-27 | 119 |
MS.gene87549.t1 | MTR_0083s0120 | 28.512 | 477 | 288 | 18 | 141 | 604 | 112 | 548 | 2.29e-27 | 118 |
MS.gene87549.t1 | MTR_3g030960 | 27.101 | 476 | 279 | 19 | 141 | 585 | 563 | 1001 | 2.35e-27 | 118 |
MS.gene87549.t1 | MTR_3g022570 | 27.329 | 483 | 309 | 15 | 147 | 604 | 594 | 1059 | 2.46e-27 | 118 |
MS.gene87549.t1 | MTR_5g071220 | 28.911 | 505 | 301 | 19 | 129 | 605 | 521 | 995 | 2.73e-27 | 118 |
MS.gene87549.t1 | MTR_5g071823 | 29.797 | 443 | 268 | 17 | 178 | 605 | 578 | 992 | 2.75e-27 | 118 |
MS.gene87549.t1 | MTR_5g071850 | 29.797 | 443 | 268 | 17 | 178 | 605 | 578 | 992 | 2.75e-27 | 118 |
MS.gene87549.t1 | MTR_5g071220 | 28.911 | 505 | 301 | 19 | 129 | 605 | 521 | 995 | 3.00e-27 | 118 |
MS.gene87549.t1 | MTR_0002s0110 | 27.652 | 528 | 311 | 21 | 89 | 585 | 515 | 1002 | 3.14e-27 | 118 |
MS.gene87549.t1 | MTR_3g022300 | 26.531 | 539 | 336 | 21 | 83 | 603 | 514 | 1010 | 3.16e-27 | 118 |
MS.gene87549.t1 | MTR_3g035480 | 27.324 | 527 | 314 | 20 | 89 | 585 | 515 | 1002 | 6.07e-27 | 117 |
MS.gene87549.t1 | MTR_3g435740 | 26.769 | 523 | 328 | 20 | 86 | 585 | 556 | 1046 | 6.31e-27 | 117 |
MS.gene87549.t1 | MTR_0002s0120 | 27.324 | 527 | 314 | 20 | 89 | 585 | 298 | 785 | 9.45e-27 | 116 |
MS.gene87549.t1 | MTR_3g030980 | 27.500 | 480 | 286 | 20 | 141 | 602 | 563 | 998 | 1.50e-26 | 115 |
MS.gene87549.t1 | MTR_3g022940 | 26.802 | 541 | 349 | 17 | 90 | 604 | 502 | 1021 | 1.73e-26 | 115 |
MS.gene87549.t1 | MTR_3g022130 | 27.239 | 536 | 312 | 22 | 94 | 581 | 501 | 1006 | 2.16e-26 | 115 |
MS.gene87549.t1 | MTR_3g019040 | 26.860 | 551 | 340 | 20 | 85 | 604 | 511 | 1029 | 2.41e-26 | 115 |
MS.gene87549.t1 | MTR_5g070470 | 28.378 | 444 | 291 | 13 | 172 | 609 | 575 | 997 | 2.66e-26 | 115 |
MS.gene87549.t1 | MTR_3g034430 | 28.645 | 391 | 246 | 15 | 89 | 466 | 516 | 886 | 2.84e-26 | 115 |
MS.gene87549.t1 | MTR_3g028040 | 27.273 | 517 | 327 | 20 | 89 | 585 | 516 | 1003 | 3.57e-26 | 114 |
MS.gene87549.t1 | MTR_3g032760 | 32.239 | 335 | 194 | 14 | 141 | 460 | 563 | 879 | 5.02e-26 | 114 |
MS.gene87549.t1 | MTR_4g019360 | 28.936 | 470 | 289 | 17 | 147 | 604 | 492 | 928 | 5.09e-26 | 114 |
MS.gene87549.t1 | MTR_3g022920 | 31.124 | 347 | 216 | 10 | 147 | 475 | 549 | 890 | 5.16e-26 | 114 |
MS.gene87549.t1 | MTR_3g032150 | 31.073 | 354 | 214 | 12 | 92 | 430 | 516 | 854 | 6.24e-26 | 114 |
MS.gene87549.t1 | MTR_3g032960 | 27.431 | 576 | 329 | 22 | 86 | 607 | 512 | 1052 | 1.25e-25 | 113 |
MS.gene87549.t1 | MTR_8g106550 | 28.052 | 385 | 239 | 13 | 86 | 466 | 444 | 794 | 1.38e-25 | 112 |
MS.gene87549.t1 | MTR_3g035960 | 27.125 | 553 | 312 | 24 | 89 | 596 | 515 | 1021 | 1.64e-25 | 112 |
MS.gene87549.t1 | MTR_3g021380 | 26.232 | 568 | 356 | 20 | 75 | 604 | 469 | 1011 | 1.71e-25 | 112 |
MS.gene87549.t1 | MTR_3g021170 | 26.690 | 577 | 369 | 20 | 59 | 604 | 469 | 1022 | 2.10e-25 | 112 |
MS.gene87549.t1 | MTR_4g050410 | 27.519 | 516 | 320 | 22 | 92 | 585 | 517 | 1000 | 2.13e-25 | 112 |
MS.gene87549.t1 | MTR_3g033240 | 27.932 | 469 | 280 | 16 | 86 | 518 | 515 | 961 | 2.46e-25 | 112 |
MS.gene87549.t1 | MTR_5g035280 | 26.453 | 499 | 297 | 16 | 156 | 602 | 565 | 1045 | 2.63e-25 | 112 |
MS.gene87549.t1 | MTR_3g035810 | 28.788 | 396 | 247 | 12 | 85 | 467 | 478 | 851 | 3.50e-25 | 111 |
MS.gene87549.t1 | MTR_5g037460 | 28.333 | 420 | 211 | 17 | 168 | 581 | 442 | 777 | 3.58e-25 | 111 |
MS.gene87549.t1 | MTR_0005s0200 | 27.619 | 525 | 296 | 20 | 149 | 610 | 588 | 1091 | 6.09e-25 | 110 |
MS.gene87549.t1 | MTR_3g025360 | 27.413 | 518 | 311 | 17 | 90 | 585 | 531 | 1005 | 6.23e-25 | 110 |
MS.gene87549.t1 | MTR_6g046450 | 27.197 | 478 | 252 | 18 | 171 | 578 | 615 | 1066 | 8.16e-25 | 110 |
MS.gene87549.t1 | MTR_7g078790 | 27.204 | 397 | 248 | 15 | 87 | 466 | 501 | 873 | 1.43e-24 | 109 |
MS.gene87549.t1 | MTR_3g021100 | 26.506 | 581 | 367 | 20 | 59 | 604 | 474 | 1029 | 1.95e-24 | 109 |
MS.gene87549.t1 | MTR_3g086070 | 27.294 | 436 | 271 | 14 | 171 | 583 | 565 | 977 | 2.05e-24 | 109 |
MS.gene87549.t1 | MTR_3g027470 | 25.000 | 572 | 338 | 20 | 83 | 604 | 423 | 953 | 2.49e-24 | 108 |
MS.gene87549.t1 | MTR_5g071780 | 26.778 | 478 | 302 | 14 | 150 | 602 | 555 | 1009 | 2.87e-24 | 108 |
MS.gene87549.t1 | MTR_3g022870 | 30.548 | 347 | 218 | 10 | 147 | 475 | 556 | 897 | 2.99e-24 | 108 |
MS.gene87549.t1 | MTR_6g084550 | 31.399 | 293 | 181 | 11 | 86 | 373 | 498 | 775 | 3.94e-24 | 108 |
MS.gene87549.t1 | MTR_1g045960 | 28.527 | 319 | 212 | 10 | 147 | 460 | 540 | 847 | 4.08e-24 | 108 |
MS.gene87549.t1 | MTR_0002s0090 | 27.032 | 529 | 312 | 25 | 89 | 585 | 515 | 1001 | 4.90e-24 | 108 |
MS.gene87549.t1 | MTR_3g035500 | 27.032 | 529 | 312 | 25 | 89 | 585 | 515 | 1001 | 4.90e-24 | 108 |
MS.gene87549.t1 | MTR_3g032340 | 27.664 | 441 | 227 | 16 | 86 | 460 | 517 | 931 | 5.90e-24 | 107 |
MS.gene87549.t1 | MTR_1g008240 | 26.565 | 527 | 319 | 17 | 89 | 599 | 501 | 975 | 6.49e-24 | 107 |
MS.gene87549.t1 | MTR_1g023600 | 26.214 | 515 | 324 | 16 | 91 | 582 | 507 | 988 | 7.62e-24 | 107 |
MS.gene87549.t1 | MTR_3g033380 | 28.238 | 471 | 275 | 20 | 147 | 596 | 573 | 1001 | 1.12e-23 | 107 |
MS.gene87549.t1 | MTR_3g014470 | 32.075 | 318 | 174 | 12 | 73 | 373 | 450 | 742 | 1.71e-23 | 105 |
MS.gene87549.t1 | MTR_2g038930 | 28.540 | 459 | 275 | 19 | 87 | 523 | 352 | 779 | 1.94e-23 | 106 |
MS.gene87549.t1 | MTR_3g022740 | 28.496 | 379 | 217 | 12 | 90 | 460 | 236 | 568 | 2.50e-23 | 105 |
MS.gene87549.t1 | MTR_2g038900 | 28.540 | 459 | 275 | 19 | 87 | 523 | 515 | 942 | 2.75e-23 | 105 |
MS.gene87549.t1 | MTR_3g021340 | 27.156 | 545 | 347 | 19 | 85 | 604 | 496 | 1015 | 2.94e-23 | 105 |
MS.gene87549.t1 | MTR_5g035240 | 27.451 | 459 | 270 | 17 | 156 | 601 | 563 | 971 | 4.85e-23 | 104 |
MS.gene87549.t1 | MTR_0267s0070 | 35.094 | 265 | 158 | 10 | 116 | 373 | 547 | 804 | 7.13e-23 | 104 |
MS.gene87549.t1 | MTR_3g032110 | 31.046 | 306 | 184 | 10 | 167 | 460 | 638 | 928 | 9.44e-23 | 103 |
MS.gene87549.t1 | MTR_8g036195 | 27.826 | 460 | 300 | 16 | 141 | 583 | 521 | 965 | 9.75e-23 | 103 |
MS.gene87549.t1 | MTR_4g126000 | 28.539 | 445 | 282 | 16 | 171 | 605 | 437 | 855 | 1.07e-22 | 103 |
MS.gene87549.t1 | MTR_3g022400 | 26.326 | 528 | 297 | 20 | 147 | 600 | 553 | 1062 | 1.23e-22 | 103 |
MS.gene87549.t1 | MTR_3g435220 | 29.338 | 317 | 210 | 9 | 149 | 460 | 530 | 837 | 1.42e-22 | 103 |
MS.gene87549.t1 | MTR_3g022400 | 26.501 | 483 | 313 | 15 | 147 | 604 | 553 | 1018 | 7.97e-22 | 100 |
MS.gene87549.t1 | MTR_3g435210 | 32.751 | 229 | 126 | 7 | 149 | 373 | 377 | 581 | 1.73e-21 | 99.8 |
MS.gene87549.t1 | MTR_5g095910 | 31.894 | 301 | 184 | 11 | 80 | 374 | 508 | 793 | 3.16e-21 | 99.4 |
MS.gene87549.t1 | MTR_3g018930 | 30.070 | 286 | 185 | 9 | 90 | 370 | 520 | 795 | 3.90e-21 | 98.6 |
MS.gene87549.t1 | MTR_5g072250 | 33.103 | 290 | 178 | 9 | 178 | 464 | 578 | 854 | 5.11e-21 | 98.2 |
MS.gene87549.t1 | MTR_8g039260 | 27.294 | 436 | 241 | 17 | 66 | 476 | 32 | 416 | 9.12e-21 | 96.7 |
MS.gene87549.t1 | MTR_6g046440 | 27.228 | 404 | 249 | 13 | 203 | 583 | 540 | 921 | 2.29e-20 | 96.3 |
MS.gene87549.t1 | MTR_2g039090 | 28.678 | 401 | 257 | 15 | 71 | 460 | 485 | 867 | 4.20e-20 | 95.5 |
MS.gene87549.t1 | MTR_2g014720 | 25.310 | 565 | 336 | 23 | 80 | 609 | 411 | 924 | 7.76e-20 | 94.7 |
MS.gene87549.t1 | MTR_3g033110 | 27.062 | 388 | 231 | 12 | 86 | 460 | 511 | 859 | 8.48e-20 | 94.7 |
MS.gene87549.t1 | MTR_3g021400 | 25.641 | 468 | 292 | 14 | 154 | 600 | 555 | 987 | 2.28e-19 | 93.2 |
MS.gene87549.t1 | MTR_3g019000 | 28.136 | 558 | 329 | 28 | 85 | 604 | 507 | 1030 | 4.98e-19 | 92.0 |
MS.gene87549.t1 | MTR_4g022940 | 74.074 | 54 | 14 | 0 | 1 | 54 | 1 | 54 | 5.11e-19 | 82.4 |
MS.gene87549.t1 | MTR_3g027200 | 31.270 | 307 | 181 | 12 | 173 | 466 | 597 | 886 | 6.66e-19 | 91.7 |
MS.gene87549.t1 | MTR_3g022060 | 28.112 | 466 | 279 | 19 | 173 | 604 | 477 | 920 | 3.40e-18 | 89.4 |
MS.gene87549.t1 | MTR_5g034770 | 32.056 | 287 | 158 | 14 | 94 | 374 | 502 | 757 | 1.07e-17 | 87.8 |
MS.gene87549.t1 | MTR_7g089080 | 31.494 | 308 | 162 | 10 | 169 | 460 | 915 | 1189 | 1.10e-17 | 87.8 |
MS.gene87549.t1 | MTR_3g034650 | 27.430 | 463 | 250 | 23 | 154 | 594 | 123 | 521 | 5.61e-17 | 85.5 |
MS.gene87549.t1 | MTR_3g021330 | 26.531 | 490 | 271 | 21 | 140 | 600 | 141 | 570 | 8.81e-17 | 84.3 |
MS.gene87549.t1 | MTR_5g039570 | 35.577 | 208 | 115 | 8 | 218 | 417 | 388 | 584 | 2.66e-16 | 82.8 |
MS.gene87549.t1 | MTR_3g018970 | 36.122 | 263 | 150 | 11 | 174 | 430 | 52 | 302 | 2.96e-16 | 82.4 |
MS.gene87549.t1 | MTR_3g056380 | 36.364 | 143 | 83 | 4 | 144 | 279 | 571 | 712 | 4.73e-15 | 79.3 |
MS.gene87549.t1 | MTR_8g037220 | 26.379 | 417 | 225 | 15 | 210 | 600 | 1576 | 1936 | 4.08e-14 | 76.6 |
MS.gene87549.t1 | MTR_8g011850 | 26.402 | 428 | 239 | 14 | 197 | 600 | 1615 | 1990 | 4.51e-14 | 76.6 |
MS.gene87549.t1 | MTR_8g037220 | 26.379 | 417 | 225 | 15 | 210 | 600 | 1355 | 1715 | 5.11e-14 | 76.3 |
MS.gene87549.t1 | MTR_7g078300 | 33.908 | 174 | 93 | 6 | 85 | 255 | 518 | 672 | 7.70e-14 | 75.5 |
MS.gene87549.t1 | MTR_7g078300 | 39.560 | 91 | 50 | 2 | 1 | 87 | 1 | 90 | 5.84e-11 | 66.2 |
MS.gene87549.t1 | MTR_5g040900 | 24.645 | 422 | 242 | 16 | 148 | 549 | 515 | 880 | 2.35e-13 | 73.9 |
MS.gene87549.t1 | MTR_2g039040 | 32.584 | 178 | 106 | 6 | 87 | 257 | 387 | 557 | 3.49e-13 | 72.8 |
MS.gene87549.t1 | MTR_8g445980 | 32.934 | 167 | 96 | 3 | 89 | 255 | 516 | 666 | 4.02e-13 | 73.2 |
MS.gene87549.t1 | MTR_5g021080 | 36.486 | 148 | 88 | 3 | 141 | 287 | 570 | 712 | 6.34e-13 | 72.4 |
MS.gene87549.t1 | MTR_4g119195 | 34.247 | 146 | 77 | 4 | 111 | 255 | 549 | 676 | 6.83e-13 | 72.4 |
MS.gene87549.t1 | MTR_4g119195 | 40.659 | 91 | 49 | 2 | 1 | 87 | 1 | 90 | 1.45e-11 | 68.2 |
MS.gene87549.t1 | MTR_3g033130 | 23.418 | 474 | 262 | 18 | 147 | 560 | 532 | 964 | 7.18e-13 | 72.4 |
MS.gene87549.t1 | MTR_7g091140 | 27.119 | 295 | 163 | 11 | 117 | 397 | 1121 | 1377 | 7.32e-13 | 72.4 |
MS.gene87549.t1 | MTR_2g038760 | 25.767 | 489 | 262 | 21 | 80 | 523 | 521 | 953 | 7.60e-13 | 72.4 |
MS.gene87549.t1 | MTR_4g119195 | 32.934 | 167 | 88 | 5 | 111 | 276 | 549 | 692 | 7.74e-13 | 72.0 |
MS.gene87549.t1 | MTR_4g119195 | 40.659 | 91 | 49 | 2 | 1 | 87 | 1 | 90 | 1.35e-11 | 68.2 |
MS.gene87549.t1 | MTR_7g091200 | 26.935 | 323 | 190 | 11 | 91 | 403 | 505 | 791 | 8.54e-13 | 72.0 |
MS.gene87549.t1 | MTR_7g491190 | 26.935 | 323 | 190 | 11 | 91 | 403 | 486 | 772 | 9.39e-13 | 72.0 |
MS.gene87549.t1 | MTR_8g090305 | 24.324 | 518 | 283 | 22 | 134 | 585 | 40 | 514 | 1.03e-12 | 71.2 |
MS.gene87549.t1 | MTR_7g013560 | 23.002 | 513 | 268 | 19 | 137 | 600 | 507 | 941 | 1.55e-12 | 71.2 |
MS.gene87549.t1 | MTR_8g027540 | 40.217 | 92 | 51 | 1 | 1 | 88 | 1 | 92 | 1.61e-12 | 71.2 |
MS.gene87549.t1 | MTR_3g011420 | 32.821 | 195 | 110 | 9 | 129 | 311 | 563 | 748 | 2.11e-12 | 70.9 |
MS.gene87549.t1 | MTR_0391s0020 | 38.636 | 88 | 54 | 0 | 167 | 254 | 672 | 759 | 2.34e-12 | 70.5 |
MS.gene87549.t1 | MTR_3g056320 | 33.908 | 174 | 98 | 7 | 149 | 314 | 586 | 750 | 5.82e-12 | 69.3 |
MS.gene87549.t1 | MTR_3g456030 | 38.393 | 112 | 66 | 3 | 149 | 260 | 577 | 685 | 7.37e-12 | 68.9 |
MS.gene87549.t1 | MTR_1g021110 | 36.364 | 88 | 56 | 0 | 167 | 254 | 676 | 763 | 1.52e-11 | 67.8 |
MS.gene87549.t1 | MTR_3g011280 | 35.838 | 173 | 90 | 8 | 151 | 311 | 552 | 715 | 1.73e-11 | 67.8 |
MS.gene87549.t1 | MTR_3g011280 | 35.838 | 173 | 90 | 8 | 151 | 311 | 584 | 747 | 1.92e-11 | 67.8 |
MS.gene87549.t1 | MTR_5g076840 | 41.758 | 91 | 48 | 2 | 1 | 87 | 1 | 90 | 1.98e-11 | 67.8 |
MS.gene87549.t1 | MTR_5g076840 | 31.551 | 187 | 101 | 8 | 111 | 294 | 551 | 713 | 2.15e-11 | 67.4 |
MS.gene87549.t1 | MTR_1g030770 | 24.408 | 422 | 213 | 16 | 216 | 600 | 535 | 887 | 2.86e-11 | 67.0 |
MS.gene87549.t1 | MTR_4g094540 | 31.765 | 170 | 107 | 4 | 85 | 254 | 537 | 697 | 4.55e-11 | 66.6 |
MS.gene87549.t1 | MTR_3g055740 | 37.143 | 105 | 64 | 2 | 156 | 260 | 525 | 627 | 5.20e-11 | 66.2 |
MS.gene87549.t1 | MTR_7g078640 | 39.560 | 91 | 50 | 2 | 1 | 87 | 1 | 90 | 6.04e-11 | 65.9 |
MS.gene87549.t1 | MTR_1g078490 | 38.739 | 111 | 63 | 3 | 147 | 255 | 558 | 665 | 6.57e-11 | 65.9 |
MS.gene87549.t1 | MTR_7g091550 | 40.741 | 81 | 48 | 0 | 150 | 230 | 583 | 663 | 6.99e-11 | 66.2 |
MS.gene87549.t1 | MTR_6g037690 | 39.130 | 92 | 51 | 2 | 1 | 88 | 1 | 91 | 7.78e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87549.t1 | AT3G14470 | 25.793 | 473 | 283 | 20 | 149 | 596 | 573 | 1002 | 4.76e-24 | 108 |
MS.gene87549.t1 | AT3G14470 | 25.793 | 473 | 283 | 20 | 149 | 596 | 573 | 1002 | 4.76e-24 | 108 |
MS.gene87549.t1 | AT3G14460 | 29.534 | 386 | 238 | 12 | 91 | 460 | 513 | 880 | 1.30e-23 | 107 |
MS.gene87549.t1 | AT1G69550 | 32.780 | 241 | 140 | 7 | 167 | 392 | 874 | 1107 | 2.56e-15 | 80.5 |
MS.gene87549.t1 | AT1G69550 | 26.233 | 507 | 274 | 16 | 110 | 599 | 803 | 1226 | 2.15e-13 | 74.3 |
MS.gene87549.t1 | AT1G69550 | 25.641 | 468 | 277 | 17 | 141 | 585 | 721 | 1140 | 1.30e-11 | 68.6 |
MS.gene87549.t1 | AT1G69550 | 26.022 | 465 | 281 | 16 | 156 | 603 | 695 | 1113 | 8.42e-11 | 65.9 |
MS.gene87549.t1 | AT2G14080 | 31.140 | 228 | 130 | 7 | 168 | 391 | 736 | 940 | 6.30e-14 | 75.9 |
MS.gene87549.t1 | AT2G14080 | 31.140 | 228 | 130 | 7 | 168 | 391 | 603 | 807 | 6.70e-14 | 75.9 |
MS.gene87549.t1 | AT3G25510 | 35.537 | 121 | 71 | 2 | 141 | 254 | 630 | 750 | 3.00e-12 | 70.5 |
MS.gene87549.t1 | AT3G25510 | 35.537 | 121 | 71 | 2 | 141 | 254 | 630 | 750 | 3.00e-12 | 70.5 |
MS.gene87549.t1 | AT5G44510 | 25.000 | 388 | 225 | 12 | 91 | 468 | 609 | 940 | 3.68e-12 | 70.1 |
MS.gene87549.t1 | AT5G44510 | 25.000 | 388 | 225 | 12 | 91 | 468 | 609 | 940 | 3.89e-12 | 70.1 |
MS.gene87549.t1 | AT5G44510 | 25.000 | 388 | 225 | 12 | 91 | 468 | 609 | 940 | 4.58e-12 | 70.1 |
MS.gene87549.t1 | AT5G44510 | 25.000 | 388 | 225 | 12 | 91 | 468 | 609 | 940 | 5.76e-12 | 69.7 |
MS.gene87549.t1 | AT3G04220 | 39.773 | 88 | 53 | 0 | 167 | 254 | 729 | 816 | 8.61e-11 | 65.5 |
MS.gene87549.t1 | AT3G04220 | 39.773 | 88 | 53 | 0 | 167 | 254 | 758 | 845 | 9.43e-11 | 65.5 |
Find 118 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCAAATTTATTAGCAAATT+TGG | 0.094005 | 4.1:+75409177 | MS.gene87549:CDS |
TTCAGGCAAATATTTCATTT+TGG | 0.130283 | 4.1:-75409767 | None:intergenic |
CTTACACATATATTTCTTTC+TGG | 0.135739 | 4.1:+75409349 | MS.gene87549:CDS |
TCTGGGTTAACTAATCTTAA+AGG | 0.170523 | 4.1:+75409367 | MS.gene87549:CDS |
TTCTCAATGCTTACAAATTA+AGG | 0.174739 | 4.1:+75408447 | MS.gene87549:CDS |
CAAACCCGTCATGTCTCTTT+TGG | 0.218599 | 4.1:+75408386 | MS.gene87549:CDS |
TGCAGTGATGTTGCCCATTC+AGG | 0.251648 | 4.1:-75409856 | None:intergenic |
TGATCTTTCTCATTGTTATA+AGG | 0.255097 | 4.1:+75408649 | MS.gene87549:CDS |
ATTCCATTCTGTCAAGTTCT+AGG | 0.260652 | 4.1:+75408543 | MS.gene87549:CDS |
TACCAACTTCCAAAGATCTT+TGG | 0.263797 | 4.1:-75408756 | None:intergenic |
CTCAAGGGCTTACAGATAAA+TGG | 0.270339 | 4.1:+75409127 | MS.gene87549:CDS |
GCCAAGAGTATGAATTTAAT+AGG | 0.275889 | 4.1:+75408992 | MS.gene87549:CDS |
TGAGATCAAGGCTGTGGTTT+TGG | 0.283133 | 4.1:+75406963 | MS.gene87549:CDS |
CCAGCCAGAGTTGAACTTGA+TGG | 0.301091 | 4.1:-75407014 | None:intergenic |
GAAAGTTGCCCAAAGATCTT+TGG | 0.315381 | 4.1:+75408747 | MS.gene87549:CDS |
AATTGGTATATACACACTTT+TGG | 0.329426 | 4.1:+75409043 | MS.gene87549:CDS |
TTCCTGATATATGTGTGTTT+TGG | 0.330898 | 4.1:-75409493 | None:intergenic |
CTCAAAGTGTTAGAGTTCTA+TGG | 0.334011 | 4.1:+75409739 | MS.gene87549:CDS |
ACCAACTTCCAAAGATCTTT+GGG | 0.343827 | 4.1:-75408755 | None:intergenic |
CTAATGTCTTGAAGCCCTTC+AGG | 0.344583 | 4.1:-75409784 | None:intergenic |
CATAGAACTCTAACACTTTG+AGG | 0.352479 | 4.1:-75409738 | None:intergenic |
AGAGGACGACTGGTGATAAA+TGG | 0.355802 | 4.1:+75408938 | MS.gene87549:CDS |
TTACACATATATTTCTTTCT+GGG | 0.357611 | 4.1:+75409350 | MS.gene87549:CDS |
AAAGTAGAGTATCTTGAGAT+AGG | 0.360899 | 4.1:+75409571 | MS.gene87549:CDS |
TTTGTCAATTGATATTGAAT+TGG | 0.366214 | 4.1:+75409026 | MS.gene87549:CDS |
TTCATCCTTCCAATACTAGA+TGG | 0.376439 | 4.1:-75408611 | None:intergenic |
CCCTATTAAATTCATACTCT+TGG | 0.387687 | 4.1:-75408993 | None:intergenic |
TTCCAAAACACACATATATC+AGG | 0.393302 | 4.1:+75409491 | MS.gene87549:CDS |
ATATTGCAATCTTCTGCAAT+TGG | 0.394597 | 4.1:-75409215 | None:intergenic |
GGCTTACAGATAAATGGATT+TGG | 0.395089 | 4.1:+75409133 | MS.gene87549:CDS |
TTCATACTCTTGGCTTCTGT+TGG | 0.397552 | 4.1:-75408983 | None:intergenic |
ATTTCTATTACCACAACATT+GGG | 0.397562 | 4.1:+75408472 | MS.gene87549:CDS |
TGTAGGGGTGGAAGATCAAT+AGG | 0.403920 | 4.1:+75409921 | MS.gene87549:CDS |
CTGCAGACTCTAAGAATCAT+AGG | 0.408118 | 4.1:+75409811 | MS.gene87549:CDS |
TTGGAAGGATGAAACATCTA+AGG | 0.424468 | 4.1:+75408621 | MS.gene87549:CDS |
TGAGAAGTTGATCGGGATGC+TGG | 0.430752 | 4.1:+75406876 | MS.gene87549:CDS |
ATTGAACCGCCATCATAATC+AGG | 0.431305 | 4.1:-75408503 | None:intergenic |
ATAACAGTTAACAATCGATA+AGG | 0.432424 | 4.1:-75409455 | None:intergenic |
ATAATTCAGTTATAGACCTT+GGG | 0.432987 | 4.1:-75408682 | None:intergenic |
CTGGGCTCCACGGTTGTTGA+AGG | 0.437052 | 4.1:+75406895 | MS.gene87549:CDS |
ATGGTTGTTACAGCATGAAA+TGG | 0.439045 | 4.1:+75409701 | MS.gene87549:CDS |
TTTGGATGCGGAGGAGCAGC+AGG | 0.440599 | 4.1:+75406981 | MS.gene87549:CDS |
ATCTTACATATATACCTGAA+TGG | 0.440697 | 4.1:+75409842 | MS.gene87549:CDS |
CACCTGTCGCCTCAAGTCTT+CGG | 0.441003 | 4.1:-75407091 | None:intergenic |
TATAACTGAATTATTTAACT+TGG | 0.445811 | 4.1:+75408691 | MS.gene87549:CDS |
GAGTTGAACTTGATGGTTGT+TGG | 0.452378 | 4.1:-75407007 | None:intergenic |
AATAATTCAGTTATAGACCT+TGG | 0.453883 | 4.1:-75408683 | None:intergenic |
CCAAGAGTATGAATTTAATA+GGG | 0.453961 | 4.1:+75408993 | MS.gene87549:CDS |
TGGTGTGACATTGTCTAATT+CGG | 0.465067 | 4.1:+75409156 | MS.gene87549:CDS |
TATCTGTAAGCCCTTGAGAC+TGG | 0.467393 | 4.1:-75409122 | None:intergenic |
TGATTATGATGGCGGTTCAA+TGG | 0.467792 | 4.1:+75408505 | MS.gene87549:CDS |
TATCTCAAGATACTCTACTT+TGG | 0.471392 | 4.1:-75409569 | None:intergenic |
ACATGCCGAGACATCACATT+CGG | 0.471765 | 4.1:-75409901 | None:intergenic |
GCCCAAAGATCTTTGGAAGT+TGG | 0.474845 | 4.1:+75408754 | MS.gene87549:CDS |
CATTTCTATTACCACAACAT+TGG | 0.477611 | 4.1:+75408471 | MS.gene87549:CDS |
AAGAGAAGTTGGAACTTGAC+AGG | 0.478987 | 4.1:-75408426 | None:intergenic |
TCTTACATATATACCTGAAT+GGG | 0.479353 | 4.1:+75409843 | MS.gene87549:CDS |
ACTTCTATGCCGCATGGGAT+AGG | 0.481327 | 4.1:+75408818 | MS.gene87549:CDS |
TAAGCATTGAGAAGAGAAGT+TGG | 0.486760 | 4.1:-75408437 | None:intergenic |
CCATCAAGTTCAACTCTGGC+TGG | 0.489227 | 4.1:+75407014 | MS.gene87549:CDS |
TATCATTGACTATGTACTCT+AGG | 0.499167 | 4.1:-75409291 | None:intergenic |
ACATGATTGAGAAGTTGATC+GGG | 0.504329 | 4.1:+75406869 | MS.gene87549:CDS |
AACATGATTGAGAAGTTGAT+CGG | 0.509026 | 4.1:+75406868 | MS.gene87549:CDS |
GGTTCTGCACTCCAGTCTCA+AGG | 0.510934 | 4.1:+75409111 | MS.gene87549:CDS |
ATGTGATGTCTCGGCATGTA+GGG | 0.514556 | 4.1:+75409905 | MS.gene87549:CDS |
AAATGAAATATTTGCCTGAA+GGG | 0.517301 | 4.1:+75409770 | MS.gene87549:CDS |
TCGCCTAGAACTTGACAGAA+TGG | 0.519797 | 4.1:-75408546 | None:intergenic |
AACTTAACTTCTATGCCGCA+TGG | 0.521398 | 4.1:+75408812 | MS.gene87549:CDS |
ACGAAGATTCCATCTAGTAT+TGG | 0.523616 | 4.1:+75408602 | MS.gene87549:CDS |
TAAATGGCTTGGAACATTTG+AGG | 0.528820 | 4.1:+75408954 | MS.gene87549:CDS |
TTCTAGGCGATTTCGTGTGA+TGG | 0.531274 | 4.1:+75408559 | MS.gene87549:CDS |
CATGCCGAGACATCACATTC+GGG | 0.536298 | 4.1:-75409900 | None:intergenic |
GCTCCACGGTTGTTGAAGGT+TGG | 0.539353 | 4.1:+75406899 | MS.gene87549:CDS |
AGTGCTAAAACTAGTGAACT+AGG | 0.540504 | 4.1:+75408899 | MS.gene87549:CDS |
AATGTGATGTCTCGGCATGT+AGG | 0.543321 | 4.1:+75409904 | MS.gene87549:CDS |
GAGAAGTTGATCGGGATGCT+GGG | 0.543335 | 4.1:+75406877 | MS.gene87549:CDS |
GATTCAGTACCTGATTATGA+TGG | 0.544381 | 4.1:+75408494 | MS.gene87549:CDS |
GATCGGGATGCTGGGCTCCA+CGG | 0.546505 | 4.1:+75406885 | MS.gene87549:CDS |
AAGGTGAATCAGACATGTAA+AGG | 0.546610 | 4.1:-75409267 | None:intergenic |
TTACAGATAAATGGATTTGG+TGG | 0.547844 | 4.1:+75409136 | MS.gene87549:CDS |
ACGACTGGTGATAAATGGCT+TGG | 0.549724 | 4.1:+75408943 | MS.gene87549:CDS |
GATCCATGCAACGATGAAGA+TGG | 0.555703 | 4.1:+75409682 | MS.gene87549:CDS |
AATCTTCGTTGACTGTGTCT+TGG | 0.559777 | 4.1:-75408588 | None:intergenic |
GTTCTGCACTCCAGTCTCAA+GGG | 0.563007 | 4.1:+75409112 | MS.gene87549:CDS |
GTAACGAAGAAGAAATCTCA+AGG | 0.565630 | 4.1:+75409401 | MS.gene87549:CDS |
CACCGAAGACTTGAGGCGAC+AGG | 0.568811 | 4.1:+75407089 | MS.gene87549:CDS |
ATTGCCCGAATGTGATGTCT+CGG | 0.569798 | 4.1:+75409896 | MS.gene87549:CDS |
AAAGCCAAAAGAGACATGAC+GGG | 0.571186 | 4.1:-75408390 | None:intergenic |
ACATAACTTGAGAGGACGAC+TGG | 0.571994 | 4.1:+75408928 | MS.gene87549:CDS |
TAAAGCCAAAAGAGACATGA+CGG | 0.573266 | 4.1:-75408391 | None:intergenic |
AAAATGAAATATTTGCCTGA+AGG | 0.575501 | 4.1:+75409769 | MS.gene87549:CDS |
GAGAGATGATCTTGACAAGC+TGG | 0.576674 | 4.1:+75406927 | MS.gene87549:CDS |
GAAGTCATCGAGCAAGTCAT+CGG | 0.584047 | 4.1:-75407064 | None:intergenic |
ACAACCATCAAGTTCAACTC+TGG | 0.584621 | 4.1:+75407010 | MS.gene87549:CDS |
CAACCATCTTCATCGTTGCA+TGG | 0.591659 | 4.1:-75409685 | None:intergenic |
TATGTCTGAGATCAAGGCTG+TGG | 0.592076 | 4.1:+75406957 | MS.gene87549:CDS |
GGTTAACTAATCTTAAAGGA+TGG | 0.594457 | 4.1:+75409371 | MS.gene87549:CDS |
GGACAATATGTCTGAGATCA+AGG | 0.596781 | 4.1:+75406951 | MS.gene87549:CDS |
ATAAGGTTAAAGAGCTCCCA+AGG | 0.601734 | 4.1:+75408666 | MS.gene87549:CDS |
AAGTCTTCGACATCTTGAGT+TGG | 0.607541 | 4.1:+75408778 | MS.gene87549:CDS |
ACTTAACTTCTATGCCGCAT+GGG | 0.609450 | 4.1:+75408813 | MS.gene87549:CDS |
GGTACTGAATCCCAATGTTG+TGG | 0.611969 | 4.1:-75408482 | None:intergenic |
AGATTCCATCTAGTATTGGA+AGG | 0.612435 | 4.1:+75408606 | MS.gene87549:CDS |
TAACGAAGAAGAAATCTCAA+GGG | 0.617789 | 4.1:+75409402 | MS.gene87549:CDS |
TCAGTACCTGATTATGATGG+CGG | 0.617900 | 4.1:+75408497 | MS.gene87549:CDS |
TGATATAATTCTACATGACA+TGG | 0.619483 | 4.1:+75409090 | MS.gene87549:CDS |
TTGACTATGTACTCTAGGCA+AGG | 0.620795 | 4.1:-75409286 | None:intergenic |
ACTTCAACACCGAAGACTTG+AGG | 0.622617 | 4.1:+75407082 | MS.gene87549:CDS |
GTAGGGGTGGAAGATCAATA+GGG | 0.626486 | 4.1:+75409922 | MS.gene87549:CDS |
GGAGGATTACATAACTTGAG+AGG | 0.653680 | 4.1:+75408920 | MS.gene87549:CDS |
AGATGATCTTGACAAGCTGG+TGG | 0.655618 | 4.1:+75406930 | MS.gene87549:CDS |
TGTGATGTCTCGGCATGTAG+GGG | 0.657039 | 4.1:+75409906 | MS.gene87549:CDS |
GTTCCAACCTTCAACAACCG+TGG | 0.664705 | 4.1:-75406902 | None:intergenic |
GATGTCTCGGCATGTAGGGG+TGG | 0.666903 | 4.1:+75409909 | MS.gene87549:CDS |
GTCATCTTTCCTATCCCATG+CGG | 0.671206 | 4.1:-75408827 | None:intergenic |
AACGAAGAAGAAATCTCAAG+GGG | 0.671355 | 4.1:+75409403 | MS.gene87549:CDS |
GCTAAAACTAGTGAACTAGG+AGG | 0.686503 | 4.1:+75408902 | MS.gene87549:CDS |
TTGGATGCGGAGGAGCAGCA+GGG | 0.689712 | 4.1:+75406982 | MS.gene87549:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATTTTAGTTAATGAAAA+GGG | + | chr4.1:75408347-75408366 | MS.gene87549:intron | 10.0% |
!! | TATAACTGAATTATTTAACT+TGG | + | chr4.1:75408691-75408710 | MS.gene87549:CDS | 15.0% |
!!! | AAATTCTTTTATCAACATTA+AGG | - | chr4.1:75407233-75407252 | None:intergenic | 15.0% |
!!! | AATTCTTTTATCAACATTAA+GGG | - | chr4.1:75407232-75407251 | None:intergenic | 15.0% |
!!! | ATATTTTAGTTAATGAAAAG+GGG | + | chr4.1:75408348-75408367 | MS.gene87549:intron | 15.0% |
!!! | CTATATTTTAGTTAATGAAA+AGG | + | chr4.1:75408346-75408365 | MS.gene87549:intron | 15.0% |
!!! | TTCTTAATTAAATAGTCTTT+TGG | - | chr4.1:75408110-75408129 | None:intergenic | 15.0% |
!! | AAATTGTGAAAAAATGTTCA+GGG | + | chr4.1:75407892-75407911 | MS.gene87549:intron | 20.0% |
!! | ATCTTCTATCTTCAATTTAA+AGG | + | chr4.1:75407773-75407792 | MS.gene87549:intron | 20.0% |
!! | TCTTCTATCTTCAATTTAAA+GGG | + | chr4.1:75407774-75407793 | MS.gene87549:intron | 20.0% |
!! | TTACACATATATTTCTTTCT+GGG | + | chr4.1:75409350-75409369 | MS.gene87549:CDS | 20.0% |
!! | TTTGTCAATTGATATTGAAT+TGG | + | chr4.1:75409026-75409045 | MS.gene87549:CDS | 20.0% |
!!! | AACATTTTGAGTTGAAAAAA+TGG | + | chr4.1:75407490-75407509 | MS.gene87549:intron | 20.0% |
!!! | GTTATTTCTATAATTGGAAT+TGG | + | chr4.1:75407411-75407430 | MS.gene87549:intron | 20.0% |
!!! | GTTTCAGTTATTTCTATAAT+TGG | + | chr4.1:75407405-75407424 | MS.gene87549:intron | 20.0% |
! | AAAATGAAATATTTGCCTGA+AGG | + | chr4.1:75409769-75409788 | MS.gene87549:CDS | 25.0% |
! | AAATGAAATATTTGCCTGAA+GGG | + | chr4.1:75409770-75409789 | MS.gene87549:CDS | 25.0% |
! | AATAATTCAGTTATAGACCT+TGG | - | chr4.1:75408686-75408705 | None:intergenic | 25.0% |
! | AGTACAAGTTTAGAAGATAT+TGG | + | chr4.1:75408185-75408204 | MS.gene87549:intron | 25.0% |
! | ATAACAGTTAACAATCGATA+AGG | - | chr4.1:75409458-75409477 | None:intergenic | 25.0% |
! | ATAATTCAGTTATAGACCTT+GGG | - | chr4.1:75408685-75408704 | None:intergenic | 25.0% |
! | ATCTTACATATATACCTGAA+TGG | + | chr4.1:75409842-75409861 | MS.gene87549:CDS | 25.0% |
! | ATTTCTATAATTGGAATTGG+AGG | + | chr4.1:75407414-75407433 | MS.gene87549:intron | 25.0% |
! | ATTTCTATTACCACAACATT+GGG | + | chr4.1:75408472-75408491 | MS.gene87549:CDS | 25.0% |
! | CTTACACATATATTTCTTTC+TGG | + | chr4.1:75409349-75409368 | MS.gene87549:CDS | 25.0% |
! | CTTATGAAAATTGATGAACA+AGG | + | chr4.1:75407996-75408015 | MS.gene87549:intron | 25.0% |
! | GAAATTGTGAAAAAATGTTC+AGG | + | chr4.1:75407891-75407910 | MS.gene87549:intron | 25.0% |
! | GGCAAATTTATTAGCAAATT+TGG | + | chr4.1:75409177-75409196 | MS.gene87549:CDS | 25.0% |
! | TCTTACATATATACCTGAAT+GGG | + | chr4.1:75409843-75409862 | MS.gene87549:CDS | 25.0% |
! | TGATATAATTCTACATGACA+TGG | + | chr4.1:75409090-75409109 | MS.gene87549:CDS | 25.0% |
! | TGATCTTTCTCATTGTTATA+AGG | + | chr4.1:75408649-75408668 | MS.gene87549:CDS | 25.0% |
! | TTCTCAATGCTTACAAATTA+AGG | + | chr4.1:75408447-75408466 | MS.gene87549:CDS | 25.0% |
!! | AATTGGTATATACACACTTT+TGG | + | chr4.1:75409043-75409062 | MS.gene87549:CDS | 25.0% |
!! | CCAAGAGTATGAATTTAATA+GGG | + | chr4.1:75408993-75409012 | MS.gene87549:CDS | 25.0% |
!! | TCAGGCAAATATTTCATTTT+GGG | - | chr4.1:75409769-75409788 | None:intergenic | 25.0% |
!! | TTCAGGCAAATATTTCATTT+TGG | - | chr4.1:75409770-75409789 | None:intergenic | 25.0% |
!!! | ATAAAGTTGTTGTTTAACAC+TGG | + | chr4.1:75407363-75407382 | MS.gene87549:intron | 25.0% |
!!! | CTTTTACTCAATTGTTGTTA+TGG | + | chr4.1:75408719-75408738 | MS.gene87549:CDS | 25.0% |
AAACAATAGTGATTCGACTT+TGG | + | chr4.1:75408129-75408148 | MS.gene87549:intron | 30.0% | |
ACAAAATGGTTCAGAAAATC+AGG | + | chr4.1:75407184-75407203 | MS.gene87549:intron | 30.0% | |
ATATTGCAATCTTCTGCAAT+TGG | - | chr4.1:75409218-75409237 | None:intergenic | 30.0% | |
ATCTCAAACTAATGTTGAGA+TGG | + | chr4.1:75407566-75407585 | MS.gene87549:intron | 30.0% | |
CAAAATGGTTCAGAAAATCA+GGG | + | chr4.1:75407185-75407204 | MS.gene87549:intron | 30.0% | |
CATTTCTATTACCACAACAT+TGG | + | chr4.1:75408471-75408490 | MS.gene87549:CDS | 30.0% | |
CCCTATTAAATTCATACTCT+TGG | - | chr4.1:75408996-75409015 | None:intergenic | 30.0% | |
GGTTAACTAATCTTAAAGGA+TGG | + | chr4.1:75409371-75409390 | MS.gene87549:CDS | 30.0% | |
TAACGAAGAAGAAATCTCAA+GGG | + | chr4.1:75409402-75409421 | MS.gene87549:CDS | 30.0% | |
TAGAAGATATTTGCTTGTGT+TGG | + | chr4.1:75407626-75407645 | MS.gene87549:intron | 30.0% | |
TATCTCAAGATACTCTACTT+TGG | - | chr4.1:75409572-75409591 | None:intergenic | 30.0% | |
TCTGGGTTAACTAATCTTAA+AGG | + | chr4.1:75409367-75409386 | MS.gene87549:CDS | 30.0% | |
TGAGATGGATAAAATGCAAT+CGG | + | chr4.1:75407581-75407600 | MS.gene87549:intron | 30.0% | |
TTCCAAAACACACATATATC+AGG | + | chr4.1:75409491-75409510 | MS.gene87549:CDS | 30.0% | |
TTTCTCTTCGTTTCAAAACT+CGG | - | chr4.1:75407284-75407303 | None:intergenic | 30.0% | |
! | AAAGTAGAGTATCTTGAGAT+AGG | + | chr4.1:75409571-75409590 | MS.gene87549:CDS | 30.0% |
! | AACATGATTGAGAAGTTGAT+CGG | + | chr4.1:75406868-75406887 | MS.gene87549:CDS | 30.0% |
! | CAATCACAAGTTGACTAAAA+AGG | + | chr4.1:75407119-75407138 | MS.gene87549:intron | 30.0% |
! | CAGGCAAATATTTCATTTTG+GGG | - | chr4.1:75409768-75409787 | None:intergenic | 30.0% |
! | CTCAATTTTAAATCTCTCTG+TGG | + | chr4.1:75409601-75409620 | MS.gene87549:CDS | 30.0% |
! | GCCAAGAGTATGAATTTAAT+AGG | + | chr4.1:75408992-75409011 | MS.gene87549:CDS | 30.0% |
! | GCTTCTCTTTTCTTACAAAA+TGG | + | chr4.1:75407170-75407189 | MS.gene87549:intron | 30.0% |
! | TATCATTGACTATGTACTCT+AGG | - | chr4.1:75409294-75409313 | None:intergenic | 30.0% |
! | TATTGGTGATAAGTACTTCA+TGG | + | chr4.1:75408202-75408221 | MS.gene87549:intron | 30.0% |
! | TTACAGATAAATGGATTTGG+TGG | + | chr4.1:75409136-75409155 | MS.gene87549:CDS | 30.0% |
! | TTCCTGATATATGTGTGTTT+TGG | - | chr4.1:75409496-75409515 | None:intergenic | 30.0% |
! | TTCTACCTTCAACATTTTCA+CGG | - | chr4.1:75407611-75407630 | None:intergenic | 30.0% |
! | TTTTGTAAGAAAAGAGAAGC+TGG | - | chr4.1:75407170-75407189 | None:intergenic | 30.0% |
!! | CAACAGAGAGAAATTGATTT+TGG | - | chr4.1:75408262-75408281 | None:intergenic | 30.0% |
!! | CTTTTTAGTCAACTTGTGAT+TGG | - | chr4.1:75407121-75407140 | None:intergenic | 30.0% |
!!! | AAGCACTTTTTCAAATGAAG+TGG | - | chr4.1:75408068-75408087 | None:intergenic | 30.0% |
!!! | TGTCTCTTTTGGCTTTAAAT+TGG | + | chr4.1:75408397-75408416 | MS.gene87549:CDS | 30.0% |
AACGAAGAAGAAATCTCAAG+GGG | + | chr4.1:75409403-75409422 | MS.gene87549:CDS | 35.0% | |
AAGCTTAATGTATTCCATGG+AGG | + | chr4.1:75407941-75407960 | MS.gene87549:intron | 35.0% | |
AAGGTGAATCAGACATGTAA+AGG | - | chr4.1:75409270-75409289 | None:intergenic | 35.0% | |
ACCAACTTCCAAAGATCTTT+GGG | - | chr4.1:75408758-75408777 | None:intergenic | 35.0% | |
ACGAAGATTCCATCTAGTAT+TGG | + | chr4.1:75408602-75408621 | MS.gene87549:CDS | 35.0% | |
AGAAGTTATTGGAAGAGATG+AGG | + | chr4.1:75407326-75407345 | MS.gene87549:intron | 35.0% | |
AGTGCTAAAACTAGTGAACT+AGG | + | chr4.1:75408899-75408918 | MS.gene87549:CDS | 35.0% | |
ATAATTGGAATTGGAGGACT+TGG | + | chr4.1:75407420-75407439 | MS.gene87549:intron | 35.0% | |
ATGGTTGTTACAGCATGAAA+TGG | + | chr4.1:75409701-75409720 | MS.gene87549:CDS | 35.0% | |
ATTCCATTCTGTCAAGTTCT+AGG | + | chr4.1:75408543-75408562 | MS.gene87549:CDS | 35.0% | |
CATAGAACTCTAACACTTTG+AGG | - | chr4.1:75409741-75409760 | None:intergenic | 35.0% | |
GATTCAGTACCTGATTATGA+TGG | + | chr4.1:75408494-75408513 | MS.gene87549:CDS | 35.0% | |
GGAACTTAGTAAGAGAATTG+AGG | + | chr4.1:75407206-75407225 | MS.gene87549:intron | 35.0% | |
GTAACGAAGAAGAAATCTCA+AGG | + | chr4.1:75409401-75409420 | MS.gene87549:CDS | 35.0% | |
GTCTCGATGAAAAACAATCT+TGG | + | chr4.1:75407796-75407815 | MS.gene87549:intron | 35.0% | |
TAAAGCCAAAAGAGACATGA+CGG | - | chr4.1:75408394-75408413 | None:intergenic | 35.0% | |
TAAGCTTCCAATGCTTCTAA+TGG | - | chr4.1:75407928-75407947 | None:intergenic | 35.0% | |
TACCAACTTCCAAAGATCTT+TGG | - | chr4.1:75408759-75408778 | None:intergenic | 35.0% | |
TGGAAGCTTAATGTATTCCA+TGG | + | chr4.1:75407938-75407957 | MS.gene87549:intron | 35.0% | |
TGGTGTGACATTGTCTAATT+CGG | + | chr4.1:75409156-75409175 | MS.gene87549:CDS | 35.0% | |
TTCATCCTTCCAATACTAGA+TGG | - | chr4.1:75408614-75408633 | None:intergenic | 35.0% | |
TTGGAAGGATGAAACATCTA+AGG | + | chr4.1:75408621-75408640 | MS.gene87549:CDS | 35.0% | |
! | ACATGATTGAGAAGTTGATC+GGG | + | chr4.1:75406869-75406888 | MS.gene87549:CDS | 35.0% |
! | AGATTCCATCTAGTATTGGA+AGG | + | chr4.1:75408606-75408625 | MS.gene87549:CDS | 35.0% |
! | ATCATCTTTTTCCAACTCAC+TGG | - | chr4.1:75409074-75409093 | None:intergenic | 35.0% |
! | CTCAAAGTGTTAGAGTTCTA+TGG | + | chr4.1:75409739-75409758 | MS.gene87549:CDS | 35.0% |
! | GGCTTACAGATAAATGGATT+TGG | + | chr4.1:75409133-75409152 | MS.gene87549:CDS | 35.0% |
! | TAAATGGCTTGGAACATTTG+AGG | + | chr4.1:75408954-75408973 | MS.gene87549:CDS | 35.0% |
! | TTGATGACATTGCTGAAAGA+CGG | + | chr4.1:75407687-75407706 | MS.gene87549:intron | 35.0% |
!! | AATGAGGAATTGGTGTCAAT+TGG | + | chr4.1:75407864-75407883 | MS.gene87549:intron | 35.0% |
!! | TAAGCATTGAGAAGAGAAGT+TGG | - | chr4.1:75408440-75408459 | None:intergenic | 35.0% |
!! | TTTTGAGAATGACAGAGAAC+AGG | + | chr4.1:75407839-75407858 | MS.gene87549:intron | 35.0% |
AAAGCCAAAAGAGACATGAC+GGG | - | chr4.1:75408393-75408412 | None:intergenic | 40.0% | |
AACTCACTCCTTTATTCGTG+CGG | + | chr4.1:75407302-75407321 | MS.gene87549:intron | 40.0% | |
AACTTAACTTCTATGCCGCA+TGG | + | chr4.1:75408812-75408831 | MS.gene87549:CDS | 40.0% | |
AACTTCTTCCGCACGAATAA+AGG | - | chr4.1:75407313-75407332 | None:intergenic | 40.0% | |
AAGAGAAGTTGGAACTTGAC+AGG | - | chr4.1:75408429-75408448 | None:intergenic | 40.0% | |
AAGTCTTCGACATCTTGAGT+TGG | + | chr4.1:75408778-75408797 | MS.gene87549:CDS | 40.0% | |
ACAACCATCAAGTTCAACTC+TGG | + | chr4.1:75407010-75407029 | MS.gene87549:CDS | 40.0% | |
ACTTAACTTCTATGCCGCAT+GGG | + | chr4.1:75408813-75408832 | MS.gene87549:CDS | 40.0% | |
AGAACAGGAGAATGAGGAAT+TGG | + | chr4.1:75407854-75407873 | MS.gene87549:intron | 40.0% | |
ATAAGGTTAAAGAGCTCCCA+AGG | + | chr4.1:75408666-75408685 | MS.gene87549:CDS | 40.0% | |
ATTCGACTTTGGATTGCACA+AGG | + | chr4.1:75408140-75408159 | MS.gene87549:intron | 40.0% | |
ATTCGTGCGGAAGAAGTTAT+TGG | + | chr4.1:75407315-75407334 | MS.gene87549:intron | 40.0% | |
ATTGAACCGCCATCATAATC+AGG | - | chr4.1:75408506-75408525 | None:intergenic | 40.0% | |
CATGCGCAATATCATGCATT+TGG | - | chr4.1:75408298-75408317 | None:intergenic | 40.0% | |
CTCAAGGGCTTACAGATAAA+TGG | + | chr4.1:75409127-75409146 | MS.gene87549:CDS | 40.0% | |
CTTAATGTATTCCATGGAGG+AGG | + | chr4.1:75407944-75407963 | MS.gene87549:intron | 40.0% | |
GAAAGTTGCCCAAAGATCTT+TGG | + | chr4.1:75408747-75408766 | MS.gene87549:CDS | 40.0% | |
GAACTCCGTGAAAATGTTGA+AGG | + | chr4.1:75407603-75407622 | MS.gene87549:intron | 40.0% | |
GCTAAAACTAGTGAACTAGG+AGG | + | chr4.1:75408902-75408921 | MS.gene87549:CDS | 40.0% | |
GGAGGATTACATAACTTGAG+AGG | + | chr4.1:75408920-75408939 | MS.gene87549:CDS | 40.0% | |
GTAAGAAAAGAGAAGCTGGT+TGG | - | chr4.1:75407166-75407185 | None:intergenic | 40.0% | |
GTTGGATGACAATTGGAATG+AGG | + | chr4.1:75407644-75407663 | MS.gene87549:intron | 40.0% | |
TCAGTACCTGATTATGATGG+CGG | + | chr4.1:75408497-75408516 | MS.gene87549:CDS | 40.0% | |
TGCTTGTGTTGGATGACAAT+TGG | + | chr4.1:75407637-75407656 | MS.gene87549:intron | 40.0% | |
TTCATACTCTTGGCTTCTGT+TGG | - | chr4.1:75408986-75409005 | None:intergenic | 40.0% | |
TTCGACTTTGGATTGCACAA+GGG | + | chr4.1:75408141-75408160 | MS.gene87549:intron | 40.0% | |
TTGACTATGTACTCTAGGCA+AGG | - | chr4.1:75409289-75409308 | None:intergenic | 40.0% | |
! | AATCTTCGTTGACTGTGTCT+TGG | - | chr4.1:75408591-75408610 | None:intergenic | 40.0% |
! | CTGCAGACTCTAAGAATCAT+AGG | + | chr4.1:75409811-75409830 | MS.gene87549:CDS | 40.0% |
! | GAGTTGAACTTGATGGTTGT+TGG | - | chr4.1:75407010-75407029 | None:intergenic | 40.0% |
! | GGACAATATGTCTGAGATCA+AGG | + | chr4.1:75406951-75406970 | MS.gene87549:CDS | 40.0% |
!! | TGATTATGATGGCGGTTCAA+TGG | + | chr4.1:75408505-75408524 | MS.gene87549:CDS | 40.0% |
AATGTATTCCATGGAGGAGG+AGG | + | chr4.1:75407947-75407966 | MS.gene87549:intron | 45.0% | |
AATGTGATGTCTCGGCATGT+AGG | + | chr4.1:75409904-75409923 | MS.gene87549:CDS | 45.0% | |
ACATAACTTGAGAGGACGAC+TGG | + | chr4.1:75408928-75408947 | MS.gene87549:CDS | 45.0% | |
ACATGCCGAGACATCACATT+CGG | - | chr4.1:75409904-75409923 | None:intergenic | 45.0% | |
ACGACTGGTGATAAATGGCT+TGG | + | chr4.1:75408943-75408962 | MS.gene87549:CDS | 45.0% | |
ACTTCAACACCGAAGACTTG+AGG | + | chr4.1:75407082-75407101 | MS.gene87549:CDS | 45.0% | |
AGAAGATGTACCACTTGCCT+GGG | - | chr4.1:75407760-75407779 | None:intergenic | 45.0% | |
AGAGGACGACTGGTGATAAA+TGG | + | chr4.1:75408938-75408957 | MS.gene87549:CDS | 45.0% | |
AGATGATCTTGACAAGCTGG+TGG | + | chr4.1:75406930-75406949 | MS.gene87549:CDS | 45.0% | |
ATGTGATGTCTCGGCATGTA+GGG | + | chr4.1:75409905-75409924 | MS.gene87549:CDS | 45.0% | |
ATTGCCCGAATGTGATGTCT+CGG | + | chr4.1:75409896-75409915 | MS.gene87549:CDS | 45.0% | |
CAACCATCTTCATCGTTGCA+TGG | - | chr4.1:75409688-75409707 | None:intergenic | 45.0% | |
CTAATGTCTTGAAGCCCTTC+AGG | - | chr4.1:75409787-75409806 | None:intergenic | 45.0% | |
GAAGTCATCGAGCAAGTCAT+CGG | - | chr4.1:75407067-75407086 | None:intergenic | 45.0% | |
GAGAGATGATCTTGACAAGC+TGG | + | chr4.1:75406927-75406946 | MS.gene87549:CDS | 45.0% | |
GATCCATGCAACGATGAAGA+TGG | + | chr4.1:75409682-75409701 | MS.gene87549:CDS | 45.0% | |
GCATGATATTGCGCATGATC+TGG | + | chr4.1:75408301-75408320 | MS.gene87549:intron | 45.0% | |
GCGCTTGCTCAACTTGTATA+CGG | + | chr4.1:75407450-75407469 | MS.gene87549:intron | 45.0% | |
GGAATGAGGATCGTGATCTT+TGG | + | chr4.1:75407658-75407677 | MS.gene87549:intron | 45.0% | |
GTCATCTTTCCTATCCCATG+CGG | - | chr4.1:75408830-75408849 | None:intergenic | 45.0% | |
TAGAAGATGTACCACTTGCC+TGG | - | chr4.1:75407761-75407780 | None:intergenic | 45.0% | |
TATCACCGCAAGAAGTGAGA+AGG | + | chr4.1:75407731-75407750 | MS.gene87549:intron | 45.0% | |
TATCTGTAAGCCCTTGAGAC+TGG | - | chr4.1:75409125-75409144 | None:intergenic | 45.0% | |
TCGCCTAGAACTTGACAGAA+TGG | - | chr4.1:75408549-75408568 | None:intergenic | 45.0% | |
TGACAGAGAACAGGAGAATG+AGG | + | chr4.1:75407848-75407867 | MS.gene87549:intron | 45.0% | |
TTCTAGGCGATTTCGTGTGA+TGG | + | chr4.1:75408559-75408578 | MS.gene87549:CDS | 45.0% | |
TTGCTGAAAGACGGAGCAAA+AGG | + | chr4.1:75407696-75407715 | MS.gene87549:intron | 45.0% | |
! | CAAACCCGTCATGTCTCTTT+TGG | + | chr4.1:75408386-75408405 | MS.gene87549:CDS | 45.0% |
! | GCCCAAAGATCTTTGGAAGT+TGG | + | chr4.1:75408754-75408773 | MS.gene87549:CDS | 45.0% |
! | GGTACTGAATCCCAATGTTG+TGG | - | chr4.1:75408485-75408504 | None:intergenic | 45.0% |
! | GTATACAAGTTGAGCAAGCG+CGG | - | chr4.1:75407451-75407470 | None:intergenic | 45.0% |
! | TATGTCTGAGATCAAGGCTG+TGG | + | chr4.1:75406957-75406976 | MS.gene87549:CDS | 45.0% |
! | TGAGATCAAGGCTGTGGTTT+TGG | + | chr4.1:75406963-75406982 | MS.gene87549:CDS | 45.0% |
!! | GGAATTGGTGTCAATTGGCA+AGG | + | chr4.1:75407869-75407888 | MS.gene87549:intron | 45.0% |
!!! | TTTTGGTGATGCCAGTGAGT+TGG | + | chr4.1:75409060-75409079 | MS.gene87549:CDS | 45.0% |
AAGAAGTGAGAAGGTTGCCC+AGG | + | chr4.1:75407740-75407759 | MS.gene87549:intron | 50.0% | |
ACTTCTATGCCGCATGGGAT+AGG | + | chr4.1:75408818-75408837 | MS.gene87549:CDS | 50.0% | |
ATTCCATGGAGGAGGAGGAT+TGG | + | chr4.1:75407952-75407971 | MS.gene87549:intron | 50.0% | |
CATGCCGAGACATCACATTC+GGG | - | chr4.1:75409903-75409922 | None:intergenic | 50.0% | |
CCAATGCTTCTAATGGCGAG+AGG | - | chr4.1:75407921-75407940 | None:intergenic | 50.0% | |
CCAGCCAGAGTTGAACTTGA+TGG | - | chr4.1:75407017-75407036 | None:intergenic | 50.0% | |
CCATCAAGTTCAACTCTGGC+TGG | + | chr4.1:75407014-75407033 | MS.gene87549:CDS | 50.0% | |
GGCAACCTTCTCACTTCTTG+CGG | - | chr4.1:75407739-75407758 | None:intergenic | 50.0% | |
GTTCCAACCTTCAACAACCG+TGG | - | chr4.1:75406905-75406924 | None:intergenic | 50.0% | |
GTTCTGCACTCCAGTCTCAA+GGG | + | chr4.1:75409112-75409131 | MS.gene87549:CDS | 50.0% | |
TGCAGTGATGTTGCCCATTC+AGG | - | chr4.1:75409859-75409878 | None:intergenic | 50.0% | |
TGTGATGTCTCGGCATGTAG+GGG | + | chr4.1:75409906-75409925 | MS.gene87549:CDS | 50.0% | |
! | CCTCTCGCCATTAGAAGCAT+TGG | + | chr4.1:75407918-75407937 | MS.gene87549:intron | 50.0% |
! | GAGAAGTTGATCGGGATGCT+GGG | + | chr4.1:75406877-75406896 | MS.gene87549:CDS | 50.0% |
! | TGAGAAGTTGATCGGGATGC+TGG | + | chr4.1:75406876-75406895 | MS.gene87549:CDS | 50.0% |
!! | CGTTTCAAAACTCGGTGCTC+AGG | - | chr4.1:75407276-75407295 | None:intergenic | 50.0% |
!!! | CAAGGCTGTGGTTTTGGATG+CGG | + | chr4.1:75406969-75406988 | MS.gene87549:CDS | 50.0% |
CACCTGTCGCCTCAAGTCTT+CGG | - | chr4.1:75407094-75407113 | None:intergenic | 55.0% | |
GCTCCACGGTTGTTGAAGGT+TGG | + | chr4.1:75406899-75406918 | MS.gene87549:CDS | 55.0% | |
GGTTCTGCACTCCAGTCTCA+AGG | + | chr4.1:75409111-75409130 | MS.gene87549:CDS | 55.0% | |
TGACCAATCCTCCTCCTCCA+TGG | - | chr4.1:75407958-75407977 | None:intergenic | 55.0% | |
CACCGAAGACTTGAGGCGAC+AGG | + | chr4.1:75407089-75407108 | MS.gene87549:CDS | 60.0% | |
CTGGGCTCCACGGTTGTTGA+AGG | + | chr4.1:75406895-75406914 | MS.gene87549:CDS | 60.0% | |
GAGAAGGTTGCCCAGGCAAG+TGG | + | chr4.1:75407747-75407766 | MS.gene87549:intron | 60.0% | |
GATGTCTCGGCATGTAGGGG+TGG | + | chr4.1:75409909-75409928 | MS.gene87549:CDS | 60.0% | |
TTGGATGCGGAGGAGCAGCA+GGG | + | chr4.1:75406982-75407001 | MS.gene87549:CDS | 60.0% | |
TTTGGATGCGGAGGAGCAGC+AGG | + | chr4.1:75406981-75407000 | MS.gene87549:CDS | 60.0% | |
!!! | GGCTGTGGTTTTGGATGCGG+AGG | + | chr4.1:75406972-75406991 | MS.gene87549:CDS | 60.0% |
GATCGGGATGCTGGGCTCCA+CGG | + | chr4.1:75406885-75406904 | MS.gene87549:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 75406847 | 75409942 | 75406847 | ID=MS.gene87549 |
chr4.1 | mRNA | 75406847 | 75409942 | 75406847 | ID=MS.gene87549.t1;Parent=MS.gene87549 |
chr4.1 | exon | 75406847 | 75407110 | 75406847 | ID=MS.gene87549.t1.exon1;Parent=MS.gene87549.t1 |
chr4.1 | CDS | 75406847 | 75407110 | 75406847 | ID=cds.MS.gene87549.t1;Parent=MS.gene87549.t1 |
chr4.1 | exon | 75408368 | 75409942 | 75408368 | ID=MS.gene87549.t1.exon2;Parent=MS.gene87549.t1 |
chr4.1 | CDS | 75408368 | 75409942 | 75408368 | ID=cds.MS.gene87549.t1;Parent=MS.gene87549.t1 |
Gene Sequence |
Protein sequence |