AlfalfaGEDB | MS.gene053584

M. sativa cultivar XinJiangDaYe / MS.gene053584

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053584.t1	XP_003610865.1	84.8	211	19	2	11	208	520	730	8.00E-60	240.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053584.t1	Q5HNR8	57.4	47	14	1	10	50	302	348	3.3e-06	53.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053584.t1	G7K6I5	84.8	211	19	2	11	208	520	730	5.8e-60	240.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050226	MS.gene053584	0.805059	1.60E-49	-1.69E-46
MS.gene050227	MS.gene053584	0.813103	3.03E-51	-1.69E-46
MS.gene050228	MS.gene053584	0.806967	6.36E-50	-1.69E-46
MS.gene050442	MS.gene053584	0.81861	1.79E-52	-1.69E-46
MS.gene050680	MS.gene053584	0.821968	3.04E-53	-1.69E-46
MS.gene050820	MS.gene053584	0.802143	6.45E-49	-1.69E-46
MS.gene051265	MS.gene053584	0.808219	3.45E-50	-1.69E-46
MS.gene051568	MS.gene053584	0.801164	1.02E-48	-1.69E-46
MS.gene051860	MS.gene053584	0.805771	1.14E-49	-1.69E-46
MS.gene052190	MS.gene053584	0.809718	1.65E-50	-1.69E-46
MS.gene052255	MS.gene053584	0.818903	1.54E-52	-1.69E-46
MS.gene052333	MS.gene053584	0.812075	5.09E-51	-1.69E-46
MS.gene05288	MS.gene053584	0.840255	9.71E-58	-1.69E-46
MS.gene05289	MS.gene053584	0.834321	3.21E-56	-1.69E-46
MS.gene053166	MS.gene053584	0.80339	3.57E-49	-1.69E-46
MS.gene053494	MS.gene053584	0.805778	1.13E-49	-1.69E-46
MS.gene053584	MS.gene05417	0.820822	5.60E-53	-1.69E-46
MS.gene053584	MS.gene05510	0.808756	2.65E-50	-1.69E-46
MS.gene053584	MS.gene055356	0.817525	3.15E-52	-1.69E-46
MS.gene053584	MS.gene055357	0.813838	2.09E-51	-1.69E-46
MS.gene053584	MS.gene055358	0.800251	1.57E-48	-1.69E-46
MS.gene053584	MS.gene055701	0.840875	6.68E-58	-1.69E-46
MS.gene053584	MS.gene056506	0.827965	1.17E-54	-1.69E-46
MS.gene053584	MS.gene057194	0.825586	4.32E-54	-1.69E-46
MS.gene053584	MS.gene057750	0.811334	7.37E-51	-1.69E-46
MS.gene053584	MS.gene058736	0.80814	3.58E-50	-1.69E-46
MS.gene053584	MS.gene059124	0.80174	7.81E-49	-1.69E-46
MS.gene053584	MS.gene059128	0.862577	4.59E-64	-1.69E-46
MS.gene053584	MS.gene059161	0.805605	1.23E-49	-1.69E-46
MS.gene053584	MS.gene060011	0.830636	2.63E-55	-1.69E-46
MS.gene053584	MS.gene060322	0.814126	1.81E-51	-1.69E-46
MS.gene053584	MS.gene060683	0.816025	6.84E-52	-1.69E-46
MS.gene053584	MS.gene060685	0.818475	1.92E-52	-1.69E-46
MS.gene053584	MS.gene060998	0.800458	1.43E-48	-1.69E-46
MS.gene053584	MS.gene061114	-0.803381	3.58E-49	-1.69E-46
MS.gene053584	MS.gene061343	0.819587	1.07E-52	-1.69E-46
MS.gene053584	MS.gene061506	0.804357	2.25E-49	-1.69E-46
MS.gene053584	MS.gene063004	0.812115	4.99E-51	-1.69E-46
MS.gene053584	MS.gene06347	0.814734	1.32E-51	-1.69E-46
MS.gene053584	MS.gene064293	0.807325	5.34E-50	-1.69E-46
MS.gene053584	MS.gene066206	0.836529	8.87E-57	-1.69E-46
MS.gene053584	MS.gene066433	0.82563	4.22E-54	-1.69E-46
MS.gene053584	MS.gene06657	0.803718	3.05E-49	-1.69E-46
MS.gene053584	MS.gene066887	0.811112	8.24E-51	-1.69E-46
MS.gene053584	MS.gene06697	0.82526	5.16E-54	-1.69E-46
MS.gene053584	MS.gene06698	0.800619	1.32E-48	-1.69E-46
MS.gene053584	MS.gene067163	0.817768	2.78E-52	-1.69E-46
MS.gene053584	MS.gene067553	0.805261	1.45E-49	-1.69E-46
MS.gene053584	MS.gene06871	0.815001	1.16E-51	-1.69E-46
MS.gene053584	MS.gene069554	0.842674	2.24E-58	-1.69E-46
MS.gene053584	MS.gene069868	-0.820601	6.29E-53	-1.69E-46
MS.gene053584	MS.gene070695	0.821822	3.29E-53	-1.69E-46
MS.gene053584	MS.gene071529	0.801086	1.06E-48	-1.69E-46
MS.gene053584	MS.gene071542	0.813936	1.99E-51	-1.69E-46
MS.gene053584	MS.gene072082	0.803269	3.78E-49	-1.69E-46
MS.gene053584	MS.gene072375	-0.803986	2.68E-49	-1.69E-46
MS.gene053584	MS.gene072677	0.823277	1.51E-53	-1.69E-46
MS.gene053584	MS.gene07344	0.810077	1.38E-50	-1.69E-46
MS.gene053584	MS.gene073460	0.81386	2.07E-51	-1.69E-46
MS.gene053584	MS.gene074393	-0.836848	7.36E-57	-1.69E-46
MS.gene053584	MS.gene07532	0.800722	1.26E-48	-1.69E-46
MS.gene053584	MS.gene20184	0.80814	3.58E-50	-1.69E-46
MS.gene053584	MS.gene20635	0.819046	1.43E-52	-1.69E-46
MS.gene053584	MS.gene22091	0.806465	8.12E-50	-1.69E-46
MS.gene053584	MS.gene22731	0.820484	6.69E-53	-1.69E-46
MS.gene053584	MS.gene23945	0.81075	9.87E-51	-1.69E-46
MS.gene053584	MS.gene24288	0.813473	2.51E-51	-1.69E-46
MS.gene053584	MS.gene25604	0.80576	1.14E-49	-1.69E-46
MS.gene053584	MS.gene25868	0.818891	1.55E-52	-1.69E-46
MS.gene053584	MS.gene25913	-0.833882	4.13E-56	-1.69E-46
MS.gene053584	MS.gene27008	0.825909	3.62E-54	-1.69E-46
MS.gene053584	MS.gene27271	0.811765	5.94E-51	-1.69E-46
MS.gene053584	MS.gene28284	0.808513	2.98E-50	-1.69E-46
MS.gene053584	MS.gene28498	0.823614	1.26E-53	-1.69E-46
MS.gene053584	MS.gene28659	0.814742	1.32E-51	-1.69E-46
MS.gene053584	MS.gene29000	0.813485	2.50E-51	-1.69E-46
MS.gene053584	MS.gene29086	0.805974	1.03E-49	-1.69E-46
MS.gene053584	MS.gene30301	0.80337	3.60E-49	-1.69E-46
MS.gene053584	MS.gene31283	0.827472	1.54E-54	-1.69E-46
MS.gene053584	MS.gene31397	0.812288	4.57E-51	-1.69E-46
MS.gene053584	MS.gene31609	0.824136	9.51E-54	-1.69E-46
MS.gene053584	MS.gene32717	0.827566	1.46E-54	-1.69E-46
MS.gene053584	MS.gene32874	0.803903	2.79E-49	-1.69E-46
MS.gene053584	MS.gene32892	0.838285	3.15E-57	-1.69E-46
MS.gene053584	MS.gene32894	0.833424	5.38E-56	-1.69E-46
MS.gene053584	MS.gene33127	-0.809315	2.01E-50	-1.69E-46
MS.gene053584	MS.gene34936	-0.819327	1.23E-52	-1.69E-46
MS.gene053584	MS.gene35408	0.837201	5.98E-57	-1.69E-46
MS.gene053584	MS.gene35822	0.807652	4.55E-50	-1.69E-46
MS.gene053584	MS.gene35823	0.807637	4.59E-50	-1.69E-46
MS.gene053584	MS.gene35824	0.809623	1.73E-50	-1.69E-46
MS.gene053584	MS.gene35864	0.804356	2.25E-49	-1.69E-46
MS.gene053584	MS.gene36061	0.806224	9.13E-50	-1.69E-46
MS.gene053584	MS.gene38381	0.808408	3.14E-50	-1.69E-46
MS.gene053584	MS.gene39338	0.807573	4.73E-50	-1.69E-46
MS.gene053584	MS.gene40678	0.804301	2.31E-49	-1.69E-46
MS.gene053584	MS.gene40942	0.813691	2.25E-51	-1.69E-46
MS.gene053584	MS.gene41121	0.800977	1.12E-48	-1.69E-46
MS.gene053584	MS.gene41327	0.808849	2.53E-50	-1.69E-46
MS.gene053584	MS.gene43040	0.810261	1.26E-50	-1.69E-46
MS.gene053584	MS.gene43459	0.801389	9.21E-49	-1.69E-46
MS.gene053584	MS.gene44461	0.836362	9.78E-57	-1.69E-46
MS.gene053584	MS.gene45090	0.80862	2.83E-50	-1.69E-46
MS.gene053584	MS.gene45812	0.82618	3.13E-54	-1.69E-46
MS.gene053584	MS.gene46250	0.81017	1.32E-50	-1.69E-46
MS.gene053584	MS.gene48577	0.826111	3.24E-54	-1.69E-46
MS.gene053584	MS.gene48704	0.801489	8.79E-49	-1.69E-46
MS.gene053584	MS.gene49565	0.811966	5.37E-51	-1.69E-46
MS.gene053584	MS.gene49940	0.803384	3.58E-49	-1.69E-46
MS.gene053584	MS.gene51548	-0.812154	4.89E-51	-1.69E-46
MS.gene053584	MS.gene51574	0.811592	6.48E-51	-1.69E-46
MS.gene053584	MS.gene52059	0.819029	1.44E-52	-1.69E-46
MS.gene053584	MS.gene52061	0.806797	6.91E-50	-1.69E-46
MS.gene053584	MS.gene52512	0.804263	2.35E-49	-1.69E-46
MS.gene053584	MS.gene53771	0.815646	8.31E-52	-1.69E-46
MS.gene053584	MS.gene54540	0.805916	1.06E-49	-1.69E-46
MS.gene053584	MS.gene54876	0.818025	2.43E-52	-1.69E-46
MS.gene053584	MS.gene55717	0.8046	2.00E-49	-1.69E-46
MS.gene053584	MS.gene55718	0.837767	4.28E-57	-1.69E-46
MS.gene053584	MS.gene56053	0.845074	5.09E-59	-1.69E-46
MS.gene053584	MS.gene56057	0.830197	3.36E-55	-1.69E-46
MS.gene053584	MS.gene56290	0.815942	7.14E-52	-1.69E-46
MS.gene053584	MS.gene56431	0.849342	3.44E-60	-1.69E-46
MS.gene053584	MS.gene56840	0.812542	4.02E-51	-1.69E-46
MS.gene053584	MS.gene56842	0.803252	3.81E-49	-1.69E-46
MS.gene053584	MS.gene57469	0.813414	2.59E-51	-1.69E-46
MS.gene053584	MS.gene57565	0.809788	1.59E-50	-1.69E-46
MS.gene053584	MS.gene57566	0.810461	1.14E-50	-1.69E-46
MS.gene053584	MS.gene57643	0.800555	1.36E-48	-1.69E-46
MS.gene053584	MS.gene58865	0.802588	5.22E-49	-1.69E-46
MS.gene053584	MS.gene59129	0.806786	6.95E-50	-1.69E-46
MS.gene053584	MS.gene59149	0.833448	5.30E-56	-1.69E-46
MS.gene053584	MS.gene59282	0.83798	3.77E-57	-1.69E-46
MS.gene053584	MS.gene59840	0.802066	6.69E-49	-1.69E-46
MS.gene053584	MS.gene60204	0.830279	3.21E-55	-1.69E-46
MS.gene053584	MS.gene60206	0.834135	3.57E-56	-1.69E-46
MS.gene053584	MS.gene60903	0.814774	1.30E-51	-1.69E-46
MS.gene053584	MS.gene61139	0.841731	3.98E-58	-1.69E-46
MS.gene053584	MS.gene61435	0.803578	3.26E-49	-1.69E-46
MS.gene053584	MS.gene61667	0.819949	8.88E-53	-1.69E-46
MS.gene053584	MS.gene61670	0.80002	1.75E-48	-1.69E-46
MS.gene053584	MS.gene62587	0.802897	4.51E-49	-1.69E-46
MS.gene053584	MS.gene63058	0.818707	1.70E-52	-1.69E-46
MS.gene053584	MS.gene63288	0.831508	1.60E-55	-1.69E-46
MS.gene053584	MS.gene63412	0.841568	4.39E-58	-1.69E-46
MS.gene053584	MS.gene63507	0.828705	7.75E-55	-1.69E-46
MS.gene053584	MS.gene66208	0.818072	2.37E-52	-1.69E-46
MS.gene053584	MS.gene66964	0.800881	1.17E-48	-1.69E-46
MS.gene053584	MS.gene67105	0.818155	2.27E-52	-1.69E-46
MS.gene053584	MS.gene68333	0.825488	4.56E-54	-1.69E-46
MS.gene053584	MS.gene68528	0.810109	1.36E-50	-1.69E-46
MS.gene053584	MS.gene68819	0.801092	1.06E-48	-1.69E-46
MS.gene053584	MS.gene68987	0.812516	4.08E-51	-1.69E-46
MS.gene053584	MS.gene69575	0.81329	2.76E-51	-1.69E-46
MS.gene053584	MS.gene69794	0.859193	4.90E-63	-1.69E-46
MS.gene053584	MS.gene70021	0.826092	3.28E-54	-1.69E-46
MS.gene053584	MS.gene70534	0.808088	3.68E-50	-1.69E-46
MS.gene053584	MS.gene70586	-0.832859	7.43E-56	-1.69E-46
MS.gene053584	MS.gene71443	0.803401	3.55E-49	-1.69E-46
MS.gene053584	MS.gene71871	0.812255	4.65E-51	-1.69E-46
MS.gene053584	MS.gene72054	0.8258	3.85E-54	-1.69E-46
MS.gene053584	MS.gene72253	0.813213	2.87E-51	-1.69E-46
MS.gene053584	MS.gene72268	0.81715	3.83E-52	-1.69E-46
MS.gene053584	MS.gene72557	0.80575	1.15E-49	-1.69E-46
MS.gene053584	MS.gene73332	0.807249	5.54E-50	-1.69E-46
MS.gene053584	MS.gene74367	0.80148	8.83E-49	-1.69E-46
MS.gene053584	MS.gene74741	0.815957	7.08E-52	-1.69E-46
MS.gene053584	MS.gene75490	0.820667	6.08E-53	-1.69E-46
MS.gene053584	MS.gene76356	0.807025	6.18E-50	-1.69E-46
MS.gene053584	MS.gene76533	-0.812902	3.36E-51	-1.69E-46
MS.gene053584	MS.gene76554	0.814708	1.34E-51	-1.69E-46
MS.gene053584	MS.gene76773	-0.804516	2.08E-49	-1.69E-46
MS.gene053584	MS.gene77188	0.806824	6.82E-50	-1.69E-46
MS.gene053584	MS.gene77781	0.810204	1.30E-50	-1.69E-46
MS.gene053584	MS.gene82533	0.800851	1.19E-48	-1.69E-46
MS.gene053584	MS.gene83831	0.823347	1.46E-53	-1.69E-46
MS.gene053584	MS.gene84326	0.83174	1.41E-55	-1.69E-46
MS.gene053584	MS.gene84948	0.813601	2.36E-51	-1.69E-46
MS.gene053584	MS.gene85149	-0.815675	8.19E-52	-1.69E-46
MS.gene053584	MS.gene85253	0.802242	6.16E-49	-1.69E-46
MS.gene053584	MS.gene86382	0.810924	9.05E-51	-1.69E-46
MS.gene053584	MS.gene87384	0.813705	2.24E-51	-1.69E-46
MS.gene053584	MS.gene87549	0.83313	6.36E-56	-1.69E-46
MS.gene053584	MS.gene87669	0.813147	2.97E-51	-1.69E-46
MS.gene053584	MS.gene88091	0.81331	2.73E-51	-1.69E-46
MS.gene053584	MS.gene88112	0.800041	1.74E-48	-1.69E-46
MS.gene053584	MS.gene89017	0.800852	1.19E-48	-1.69E-46
MS.gene053584	MS.gene91645	0.808704	2.72E-50	-1.69E-46
MS.gene053584	MS.gene91808	0.80529	1.43E-49	-1.69E-46
MS.gene053584	MS.gene91809	0.811221	7.80E-51	-1.69E-46
MS.gene053584	MS.gene93041	0.823788	1.15E-53	-1.69E-46
MS.gene053584	MS.gene93500	0.8123	4.54E-51	-1.69E-46
MS.gene053584	MS.gene93890	0.800844	1.19E-48	-1.69E-46
MS.gene053584	MS.gene93892	0.8215	3.91E-53	-1.69E-46
MS.gene053584	MS.gene95377	0.83035	3.09E-55	-1.69E-46
MS.gene053584	MS.gene95552	0.806021	1.01E-49	-1.69E-46
MS.gene053584	MS.gene99802	0.823413	1.40E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053584.t1	MTR_5g007870	88.152	211	12	3	11	208	520	730	5.04e-127	379

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 42 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACGAGGATGCTTCTGTTTC+AGG	0.107488	4.4:+21421522	None:intergenic
TAGGAGGATGCTTCTGTTTC+AGG	0.113465	4.4:+21421480	None:intergenic
GCCACTAGGCTTTGGGATTA+AGG	0.224626	4.4:+21421946	None:intergenic
GATGAGGATGCATCTGTTTC+AGG	0.245100	4.4:+21421564	None:intergenic
AGGTGTATCCATTCTGTCTA+TGG	0.263485	4.4:+21421584	None:intergenic
AGGTGCATCCATTCTGTCTA+TGG	0.274117	4.4:+21421542	None:intergenic
CCCAAAGCCTAGTGGCTATC+AGG	0.312696	4.4:-21421939	MS.gene053584:intron
ACCTGATAGCCACTAGGCTT+TGG	0.333731	4.4:+21421938	None:intergenic
TTATGCACGGCTATACAAAA+AGG	0.347651	4.4:-21421156	MS.gene053584:intron
AGCAGCAAGTAGGTGACTTC+TGG	0.351419	4.4:+21421381	None:intergenic
GGCCGCACATCGGCTTTATA+AGG	0.356189	4.4:-21421628	MS.gene053584:CDS
ATTCTGTCTATGGATGAAAA+AGG	0.366978	4.4:+21421594	None:intergenic
CCTGATAGCCACTAGGCTTT+GGG	0.368633	4.4:+21421939	None:intergenic
AAGCTTCCCATCGCTTATCC+TGG	0.456526	4.4:+21421177	None:intergenic
TCCTTGCACACTGCAGTTGA+AGG	0.457978	4.4:-21421806	MS.gene053584:CDS
GCAGCAAGTAGGTGACTTCT+GGG	0.458547	4.4:+21421382	None:intergenic
ACTTCTAAAGGCGAGTTGTC+AGG	0.469383	4.4:+21421782	None:intergenic
TACTTGCTGCTGTTATCATC+AGG	0.469739	4.4:-21421369	MS.gene053584:intron
TGCTTCAGGTGTCTGATGAA+TGG	0.479306	4.4:-21420502	MS.gene053584:intron
TTGAACCAGGACATGGGGAT+TGG	0.485459	4.4:-21420475	MS.gene053584:CDS
ACCTTCAACTGCAGTGTGCA+AGG	0.533306	4.4:+21421805	None:intergenic
TGGTGGTTTGAACCAGGACA+TGG	0.544727	4.4:-21420482	MS.gene053584:CDS
AAGAATAAGTCATTGAAGAC+TGG	0.546254	4.4:-21421408	MS.gene053584:CDS
ATCCTCATCCATAGACAGAA+TGG	0.554296	4.4:-21421550	MS.gene053584:CDS
ATCCATTCTGTCTATGGATG+AGG	0.570002	4.4:+21421548	None:intergenic
ATCCTCGTCTATAGACAGAA+TGG	0.578285	4.4:-21421508	MS.gene053584:CDS
GTACACCAATCCCCATGTCC+TGG	0.585989	4.4:+21420470	None:intergenic
AACATGGACTGGCCGCACAT+CGG	0.587459	4.4:-21421638	MS.gene053584:CDS
GGTGGTTTGAACCAGGACAT+GGG	0.589942	4.4:-21420481	MS.gene053584:CDS
TTCAGGTGTCTGATGAATGG+TGG	0.600539	4.4:-21420499	MS.gene053584:intron
GTGGTTTGAACCAGGACATG+GGG	0.604494	4.4:-21420480	MS.gene053584:CDS
GATGAATGGTGGTTTGAACC+AGG	0.608417	4.4:-21420488	MS.gene053584:CDS
TGAGTATGCTGAACATGGAC+TGG	0.614896	4.4:-21421649	MS.gene053584:CDS
ATGCATGAGTATGCTGAACA+TGG	0.615116	4.4:-21421654	MS.gene053584:CDS
TTCCTTATAAAGCCGATGTG+CGG	0.615392	4.4:+21421626	None:intergenic
AAATACACACTGTGTCGAGA+TGG	0.617275	4.4:-21420437	MS.gene053584:CDS
TGATGATAACAGCAGCAAGT+AGG	0.630310	4.4:+21421371	None:intergenic
TCCTTAATCCCAAAGCCTAG+TGG	0.642915	4.4:-21421947	MS.gene053584:CDS
AGCGATGGGAAGCTTATGCA+CGG	0.649071	4.4:-21421169	MS.gene053584:CDS
AGCCTAACCTGATAGCCACT+AGG	0.659756	4.4:+21421932	None:intergenic
ATCCATTCTGTCTATAGACG+AGG	0.664126	4.4:+21421506	None:intergenic
TCGAGATGGTATGTATCACA+AGG	0.673604	4.4:-21420423	MS.gene053584:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATAAACGTTAAATATATTT+TGG	-	chr4.4:21421641-21421660	MS.gene053584:CDS	10.0%
!!	AACAAAATATAAAGAAAAGA+TGG	+	chr4.4:21421106-21421125	None:intergenic	15.0%
!!	ATTATTATAAATGAAGTACA+TGG	-	chr4.4:21421822-21421841	MS.gene053584:intron	15.0%
!!	TTGTATTATCTTGAAAAATT+AGG	+	chr4.4:21420911-21420930	None:intergenic	15.0%
!!!	TTATTTTTTCTTATTCTCTT+TGG	-	chr4.4:21421741-21421760	MS.gene053584:intron	15.0%
!!!	TTCTTTTTCTTAGATATAAA+CGG	-	chr4.4:21421925-21421944	MS.gene053584:intron	15.0%
!!!	TTTTTATTTTTTTCCTTGTT+TGG	-	chr4.4:21421524-21421543	MS.gene053584:CDS	15.0%
!!	AAATCATTACAAGGAATTAA+GGG	+	chr4.4:21421716-21421735	None:intergenic	20.0%
!!	AGAAACAAAAACAATGATAA+AGG	+	chr4.4:21421465-21421484	None:intergenic	20.0%
!!	ATAAAAGTCAAATCATTACA+AGG	+	chr4.4:21421725-21421744	None:intergenic	20.0%
!!	GAAACAAAAACAATGATAAA+GGG	+	chr4.4:21421464-21421483	None:intergenic	20.0%
!!	GCTTAACTTAAAACATTTAT+TGG	-	chr4.4:21420692-21420711	MS.gene053584:intron	20.0%
!!	TAACATAAATCCATTAGAAA+TGG	+	chr4.4:21420488-21420507	None:intergenic	20.0%
!!!	TCTTTTTCTTAGATATAAAC+GGG	-	chr4.4:21421926-21421945	MS.gene053584:intron	20.0%
!!!	TTGATTGGTTAAAACTAAAA+TGG	+	chr4.4:21421219-21421238	None:intergenic	20.0%
!	AATATAAAGAAAAGATGGCA+CGG	+	chr4.4:21421101-21421120	None:intergenic	25.0%
!	AGAACTAGAATAAAGAAAGT+GGG	+	chr4.4:21421568-21421587	None:intergenic	25.0%
!	CAAATCATTACAAGGAATTA+AGG	+	chr4.4:21421717-21421736	None:intergenic	25.0%
!!	CTCTTTGGTTTATAGATTAA+TGG	-	chr4.4:21421756-21421775	MS.gene053584:intron	25.0%
!!	TAGAAGTACAAAAAAGAACA+CGG	-	chr4.4:21420053-21420072	MS.gene053584:intron	25.0%
!!	TGATTGGTTAAAATTCACAT+GGG	-	chr4.4:21421171-21421190	MS.gene053584:CDS	25.0%
!!	TTGATTGGTTAAAATTCACA+TGG	-	chr4.4:21421170-21421189	MS.gene053584:CDS	25.0%
!!	TTGGTAATTGATATGAATGT+AGG	-	chr4.4:21420711-21420730	MS.gene053584:intron	25.0%
!!!	ATGGACATTCTTTTTTTTGT+TGG	-	chr4.4:21421841-21421860	MS.gene053584:intron	25.0%
!!!	CTTTTTTTTGTTGGATTACA+TGG	-	chr4.4:21421850-21421869	MS.gene053584:intron	25.0%
!!!	GTTCTTTTTTGTACTTCTAA+AGG	+	chr4.4:21420052-21420071	None:intergenic	25.0%
	AAGAATAAGTCATTGAAGAC+TGG	-	chr4.4:21420411-21420430	MS.gene053584:intron	30.0%
	ACTCATAGTTACTGATAAGT+GGG	-	chr4.4:21420832-21420851	MS.gene053584:intron	30.0%
	ATTCTGTCTATGGATGAAAA+AGG	+	chr4.4:21420228-21420247	None:intergenic	30.0%
	CAGAACTAGAATAAAGAAAG+TGG	+	chr4.4:21421569-21421588	None:intergenic	30.0%
	TATGGATGAAAAAGGATTTC+TGG	+	chr4.4:21420220-21420239	None:intergenic	30.0%
	TCTTACACACTTTCTTTGAT+TGG	+	chr4.4:21421234-21421253	None:intergenic	30.0%
	TGCAACATTTCCATTTCTAA+TGG	-	chr4.4:21420475-21420494	MS.gene053584:CDS	30.0%
!	AGAAGTACAAAAAAGAACAC+GGG	-	chr4.4:21420054-21420073	MS.gene053584:intron	30.0%
!	TTCTGTGTCTTTGGAAAAAT+AGG	+	chr4.4:21420361-21420380	None:intergenic	30.0%
!	TTTTTCATCCATAGACAGAA+TGG	-	chr4.4:21420227-21420246	MS.gene053584:intron	30.0%
!!	CACTTTCTTTATTCTAGTTC+TGG	-	chr4.4:21421567-21421586	MS.gene053584:CDS	30.0%
!!	TGATAGAAGATCATTTTTCC+AGG	-	chr4.4:21420624-21420643	MS.gene053584:intron	30.0%
	AAGACGAGCTACAATCAATA+TGG	+	chr4.4:21420520-21420539	None:intergenic	35.0%
	AAGTACAAAAAAGAACACGG+GGG	-	chr4.4:21420056-21420075	MS.gene053584:intron	35.0%
	ACATGGGTCCCATATAAATT+TGG	-	chr4.4:21421187-21421206	MS.gene053584:CDS	35.0%
	CAAATGTGCATATCCAAACA+AGG	+	chr4.4:21421540-21421559	None:intergenic	35.0%
	GAAACAAAGAAAACAACGTC+TGG	+	chr4.4:21420991-21421010	None:intergenic	35.0%
	GAAGTACAAAAAAGAACACG+GGG	-	chr4.4:21420055-21420074	MS.gene053584:intron	35.0%
	GACTCATAGTTACTGATAAG+TGG	-	chr4.4:21420831-21420850	MS.gene053584:intron	35.0%
	GGATCCCACCAAATTTATAT+GGG	+	chr4.4:21421198-21421217	None:intergenic	35.0%
	TACATATGCATTTCCTCTCT+CGG	-	chr4.4:21421061-21421080	MS.gene053584:intron	35.0%
	TATACTTAGAAGCCAGTAAC+TGG	-	chr4.4:21420769-21420788	MS.gene053584:intron	35.0%
	TATGAGTCATACTCAACAAG+AGG	+	chr4.4:21420819-21420838	None:intergenic	35.0%
	TGCTTGTGATGTATGTTTGT+GGG	-	chr4.4:21420735-21420754	MS.gene053584:intron	35.0%
	TGGATCCCACCAAATTTATA+TGG	+	chr4.4:21421199-21421218	None:intergenic	35.0%
	TTATGCACGGCTATACAAAA+AGG	-	chr4.4:21420663-21420682	MS.gene053584:intron	35.0%
!	ATTTTCCTCTTCTGTGTCTT+TGG	+	chr4.4:21420370-21420389	None:intergenic	35.0%
!	ATTTTTCCAGGATAAGCGAT+GGG	-	chr4.4:21420636-21420655	MS.gene053584:intron	35.0%
!	TGTGTCTTTGGAAAAATAGG+AGG	+	chr4.4:21420358-21420377	None:intergenic	35.0%
!	TTTTTCCAAAGACACAGAAG+AGG	-	chr4.4:21420362-21420381	MS.gene053584:intron	35.0%
	AAATACACACTGTGTCGAGA+TGG	-	chr4.4:21421382-21421401	MS.gene053584:CDS	40.0%
	ACAATCATCCATCCAGTTAC+TGG	+	chr4.4:21420784-21420803	None:intergenic	40.0%
	ACACACACACACTCTTTGAT+TGG	-	chr4.4:21421155-21421174	MS.gene053584:intron	40.0%
	AGGTGTATCCATTCTGTCTA+TGG	+	chr4.4:21420238-21420257	None:intergenic	40.0%
	ATAGTTACTGATAAGTGGGC+AGG	-	chr4.4:21420836-21420855	MS.gene053584:intron	40.0%
	ATCCATTCTGTCTATAGACG+AGG	+	chr4.4:21420316-21420335	None:intergenic	40.0%
	ATCCATTCTGTCTATGGATG+AGG	+	chr4.4:21420232-21420251	None:intergenic	40.0%
	ATCCTCATCCATAGACAGAA+TGG	-	chr4.4:21420269-21420288	MS.gene053584:intron	40.0%
	ATCCTCGTCTATAGACAGAA+TGG	-	chr4.4:21420311-21420330	MS.gene053584:intron	40.0%
	ATGCATGAGTATGCTGAACA+TGG	-	chr4.4:21420165-21420184	MS.gene053584:intron	40.0%
	CTAGAATAAAGAAAGTGGGC+AGG	+	chr4.4:21421564-21421583	None:intergenic	40.0%
	CTGCTTGTGATGTATGTTTG+TGG	-	chr4.4:21420734-21420753	MS.gene053584:intron	40.0%
	GAGAGAGGAAATGCATATGT+AGG	+	chr4.4:21421062-21421081	None:intergenic	40.0%
	GGGTCCCATATAAATTTGGT+GGG	-	chr4.4:21421191-21421210	MS.gene053584:CDS	40.0%
	TAACTGGATGGATGATTGTG+TGG	-	chr4.4:21420785-21420804	MS.gene053584:intron	40.0%
	TAGTTACTGATAAGTGGGCA+GGG	-	chr4.4:21420837-21420856	MS.gene053584:intron	40.0%
	TCGAGATGGTATGTATCACA+AGG	-	chr4.4:21421396-21421415	MS.gene053584:CDS	40.0%
	TGATGATAACAGCAGCAAGT+AGG	+	chr4.4:21420451-21420470	None:intergenic	40.0%
	TGGGTCCCATATAAATTTGG+TGG	-	chr4.4:21421190-21421209	MS.gene053584:CDS	40.0%
	TTCCTTATAAAGCCGATGTG+CGG	+	chr4.4:21420196-21420215	None:intergenic	40.0%
!	CATTTTTCCAGGATAAGCGA+TGG	-	chr4.4:21420635-21420654	MS.gene053584:intron	40.0%
!	GTTACCATTTTGCATACCAG+AGG	-	chr4.4:21420142-21420161	MS.gene053584:intron	40.0%
!	TACTTGCTGCTGTTATCATC+AGG	-	chr4.4:21420450-21420469	MS.gene053584:CDS	40.0%
	AGAAATCTCTGCAGCATGTG+AGG	+	chr4.4:21420092-21420111	None:intergenic	45.0%
	AGGTGCATCCATTCTGTCTA+TGG	+	chr4.4:21420280-21420299	None:intergenic	45.0%
	CAGCAGTAAGCAACTTGACA+AGG	+	chr4.4:21421294-21421313	None:intergenic	45.0%
	CTTAGAAGCCAGTAACTGGA+TGG	-	chr4.4:21420773-21420792	MS.gene053584:intron	45.0%
	GATGAATGGTGGTTTGAACC+AGG	-	chr4.4:21421331-21421350	MS.gene053584:intron	45.0%
	GATGAGGATGCATCTGTTTC+AGG	+	chr4.4:21420258-21420277	None:intergenic	45.0%
	GCATCCTCTGGTATGCAAAA+TGG	+	chr4.4:21420149-21420168	None:intergenic	45.0%
	TAGGAGGATGCTTCTGTTTC+AGG	+	chr4.4:21420342-21420361	None:intergenic	45.0%
	TCCTTAATCCCAAAGCCTAG+TGG	-	chr4.4:21419872-21419891	MS.gene053584:intron	45.0%
	TCTCAGCTATGCAGAGACAA+TGG	-	chr4.4:21421482-21421501	MS.gene053584:CDS	45.0%
	TGAGTATGCTGAACATGGAC+TGG	-	chr4.4:21420170-21420189	MS.gene053584:intron	45.0%
	TGCTTCAGGTGTCTGATGAA+TGG	-	chr4.4:21421317-21421336	MS.gene053584:intron	45.0%
	TTCAGGTGTCTGATGAATGG+TGG	-	chr4.4:21421320-21421339	MS.gene053584:intron	45.0%
!	ACTTCTAAAGGCGAGTTGTC+AGG	+	chr4.4:21420040-21420059	None:intergenic	45.0%
!!	TATAATAATAAAAGTTAATT+TGG	+	chr4.4:21421811-21421830	None:intergenic	5.0%
	AACTGCAGTTGCTTCGCAGT+CGG	-	chr4.4:21420934-21420953	MS.gene053584:intron	50.0%
	AAGCTTCCCATCGCTTATCC+TGG	+	chr4.4:21420645-21420664	None:intergenic	50.0%
	ACCTGATAGCCACTAGGCTT+TGG	+	chr4.4:21419884-21419903	None:intergenic	50.0%
	ACCTTCAACTGCAGTGTGCA+AGG	+	chr4.4:21420017-21420036	None:intergenic	50.0%
	AGCAGCAAGTAGGTGACTTC+TGG	+	chr4.4:21420441-21420460	None:intergenic	50.0%
	AGCCTAACCTGATAGCCACT+AGG	+	chr4.4:21419890-21419909	None:intergenic	50.0%
	AGCCTAGTGGCTATCAGGTT+AGG	-	chr4.4:21419885-21419904	MS.gene053584:intron	50.0%
	AGCGATGGGAAGCTTATGCA+CGG	-	chr4.4:21420650-21420669	MS.gene053584:intron	50.0%
	CAGCATACTCATGCATCCTC+TGG	+	chr4.4:21420161-21420180	None:intergenic	50.0%
	CCTGATAGCCACTAGGCTTT+GGG	+	chr4.4:21419883-21419902	None:intergenic	50.0%
	GACGAGGATGCTTCTGTTTC+AGG	+	chr4.4:21420300-21420319	None:intergenic	50.0%
	GCAGCAAGTAGGTGACTTCT+GGG	+	chr4.4:21420440-21420459	None:intergenic	50.0%
	GGTGGTTTGAACCAGGACAT+GGG	-	chr4.4:21421338-21421357	MS.gene053584:intron	50.0%
	GTGGTTTGAACCAGGACATG+GGG	-	chr4.4:21421339-21421358	MS.gene053584:intron	50.0%
	TCCTTGCACACTGCAGTTGA+AGG	-	chr4.4:21420013-21420032	MS.gene053584:intron	50.0%
	TGGTGGTTTGAACCAGGACA+TGG	-	chr4.4:21421337-21421356	MS.gene053584:intron	50.0%
	TTGAACCAGGACATGGGGAT+TGG	-	chr4.4:21421344-21421363	MS.gene053584:intron	50.0%
!!	GCCACTAGGCTTTGGGATTA+AGG	+	chr4.4:21419876-21419895	None:intergenic	50.0%
!!	GCTTACTGCTGACTTGCTTC+AGG	-	chr4.4:21421303-21421322	MS.gene053584:intron	50.0%
	CCCAAAGCCTAGTGGCTATC+AGG	-	chr4.4:21419880-21419899	MS.gene053584:intron	55.0%
	GTACACCAATCCCCATGTCC+TGG	+	chr4.4:21421352-21421371	None:intergenic	55.0%
!!	AACATGGACTGGCCGCACAT+CGG	-	chr4.4:21420181-21420200	MS.gene053584:intron	55.0%
!!	GGCCGCACATCGGCTTTATA+AGG	-	chr4.4:21420191-21420210	MS.gene053584:intron	55.0%
	AAGATGGCACGGCAGCAGAC+TGG	+	chr4.4:21421090-21421109	None:intergenic	60.0%
	TGCTTCGCAGTCGGAGACGT+AGG	-	chr4.4:21420943-21420962	MS.gene053584:intron	60.0%
	AGCAGACTGGTGGCCGAGAG+AGG	+	chr4.4:21421077-21421096	None:intergenic	65.0%
	AGTGGGCAGGGTCTCTCGAG+AGG	-	chr4.4:21420849-21420868	MS.gene053584:intron	65.0%
	ATGGCACGGCAGCAGACTGG+TGG	+	chr4.4:21421087-21421106	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	21419851	21421990	21419851	ID=MS.gene053584
chr4.4	mRNA	21419851	21421990	21419851	ID=MS.gene053584.t1;Parent=MS.gene053584
chr4.4	exon	21421940	21421990	21421940	ID=MS.gene053584.t1.exon1;Parent=MS.gene053584.t1
chr4.4	CDS	21421940	21421990	21421940	ID=cds.MS.gene053584.t1;Parent=MS.gene053584.t1
chr4.4	exon	21421784	21421828	21421784	ID=MS.gene053584.t1.exon2;Parent=MS.gene053584.t1
chr4.4	CDS	21421784	21421828	21421784	ID=cds.MS.gene053584.t1;Parent=MS.gene053584.t1
chr4.4	exon	21421370	21421679	21421370	ID=MS.gene053584.t1.exon3;Parent=MS.gene053584.t1
chr4.4	CDS	21421370	21421679	21421370	ID=cds.MS.gene053584.t1;Parent=MS.gene053584.t1
chr4.4	exon	21421157	21421281	21421157	ID=MS.gene053584.t1.exon4;Parent=MS.gene053584.t1
chr4.4	CDS	21421157	21421281	21421157	ID=cds.MS.gene053584.t1;Parent=MS.gene053584.t1
chr4.4	exon	21420424	21420516	21420424	ID=MS.gene053584.t1.exon5;Parent=MS.gene053584.t1
chr4.4	CDS	21420424	21420516	21420424	ID=cds.MS.gene053584.t1;Parent=MS.gene053584.t1
chr4.4	exon	21419851	21419877	21419851	ID=MS.gene053584.t1.exon6;Parent=MS.gene053584.t1
chr4.4	CDS	21419851	21419877	21419851	ID=cds.MS.gene053584.t1;Parent=MS.gene053584.t1

Gene Sequence

>MS.gene053584

ATGGTGAATTTGATGACTACATCCTTAATCCCAAAGCCTAGTGGCTATCAGGTTAGGCTTTCTGTTCGTATAAGAAATAAAATTAAAATGATCATTTTATTATGCTAATCTTAAGAACTTTGCTAAATTTTGTATTAACATGTTAACTTACTAAAATTGCAGTCCTTGCACACTGCAGTTGAAGGTCCTGACAACTCGCCTTTAGAAGTACAAAAAAGAACACGGGGGCTAAATTTTTCCTCACATGCTGCAGAGATTTCTTCGTGTATAATTTAGTTGTTAATGTTTTCAGTTACCATTTTGCATACCAGAGGATGCATGAGTATGCTGAACATGGACTGGCCGCACATCGGCTTTATAAGGAAACCAGAAATCCTTTTTCATCCATAGACAGAATGGATACACCTGAAACAGATGCATCCTCATCCATAGACAGAATGGATGCACCTGAAACAGAAGCATCCTCGTCTATAGACAGAATGGATACACCTGAAACAGAAGCATCCTCCTATTTTTCCAAAGACACAGAAGAGGAAAATTCTTCAGATATTTTACTGAGCAAGAATAAGTCATTGAAGACTGGACACCCAGAAGTCACCTACTTGCTGCTGTTATCATCAGGTGTGCAACATTTCCATTTCTAATGGATTTATGTTACAGAGCTATCCATATTGATTGTAGCTCGTCTTTGTTACTGTTTTCAGTGTAGAAAATGAAGCAAGAGAACTGCTAGTTGCTGTAAGCTTTCAGCTAGCAGCTTCTGATGCAGTAGCTGATAGAAGATCATTTTTCCAGGATAAGCGATGGGAAGCTTATGCACGGCTATACAAAAAGGTTTTCTGCTTAACTTAAAACATTTATTGGTAATTGATATGAATGTAGGCTGCTTGTGATGTATGTTTGTGGGCACAAAATACTTATACTTAGAAGCCAGTAACTGGATGGATGATTGTGTGGTAGTTAAGCCTCTTGTTGAGTATGACTCATAGTTACTGATAAGTGGGCAGGGTCTCTCGAGAGGACTGTAGTATTTAAATAAAAGTTGTACATAGTAAATCCTAATTTTTCAAGATAATACAAATGAACTGCAGTTGCTTCGCAGTCGGAGACGTAGGCAAAATTGTCTGAACTTCGTTTCCAGACGTTGTTTTCTTTGTTTCTTTACTCTTTAGAACATGATTGCTGTACTAACACTTCGCAACTAGCTTCCTACATATGCATTTCCTCTCTCGGCCACCAGTCTGCTGCCGTGCCATCTTTTCTTTATATTTTGTTTTAAGTGCTAACAACACATTGTCTAACACACACACACACACTCTTTGATTGGTTAAAATTCACATGGGTCCCATATAAATTTGGTGGGATCCATTTTAGTTTTAACCAATCAAAGAAAGTGTGTAAGAGAATGTGTTGTTAGCATTATTCTTTTGTTTTAAATTACCTTGTCAAGTTGCTTACTGCTGACTTGCTTCAGGTGTCTGATGAATGGTGGTTTGAACCAGGACATGGGGATTGGTGTACTTGTCTAGAGAAATACACACTGTGTCGAGATGGTATGTATCACAAGGTATGTATTTCTGATCAGTTAAGCATTTGAAAATCGCACACTTCCCTTTATCATTGTTTTTGTTTCTCAGCTATGCAGAGACAATGGCATACATACGCTGTGATTTTTTTTATTTTTTTCCTTGTTTGGATATGCACATTTGTCCTGCCCACTTTCTTTATTCTAGTTCTGGCTTTAGTTCTAATAATCGATGTTGTGTTAGAAATGTATGTGCTTCGTAGTAAATAAACGTTAAATATATTTTGGACAGTCTATTGCTAAGTCAATTTTTGAAGTCTTAAAGTCAACTATTTAACCCTTAATTCCTTGTAATGATTTGACTTTTATTTTTTCTTATTCTCTTTGGTTTATAGATTAATGGTGTAATATCTCTTTATATCAGCAATTCATCCAAATTAACTTTTATTATTATAAATGAAGTACATGGACATTCTTTTTTTTGTTGGATTACATGGACATATTTAATTAATACAAACAAAATATGATGTTTTCTTCTAGTTACTGATTTTCTTTTTCTTAGATATAAACGGGTTTGTAAATAAGCAGACTGCTTTACTGAAGAACTTTATTTAA

Protein sequence

>MS.gene053584.t1

MVNLMTTSLIPKPSGYQSLHTAVEGPDNSPLERMHEYAEHGLAAHRLYKETRNPFSSIDRMDTPETDASSSIDRMDAPETEASSSIDRMDTPETEASSYFSKDTEEENSSDILLSKNKSLKTGHPEVTYLLLLSSENEARELLVAVSFQLAASDAVADRRSFFQDKRWEAYARLYKKVSDEWWFEPGHGDWCTCLEKYTLCRDGMYHKTALLKNFI