AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87798

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87798.t1 MTR_7g071120 96.333 409 15 0 1 409 87 495 0.0 829
MS.gene87798.t1 MTR_4g013260 59.615 416 110 14 1 405 121 489 5.59e-146 424
MS.gene87798.t1 MTR_5g074400 49.883 427 161 12 13 405 173 580 7.81e-114 345
MS.gene87798.t1 MTR_3g031220 52.368 359 125 11 64 406 180 508 7.15e-108 327
MS.gene87798.t1 MTR_5g042920 52.988 251 85 4 72 300 143 382 1.72e-81 257
MS.gene87798.t1 MTR_5g042920 48.718 78 37 2 71 147 311 386 1.41e-14 75.5
MS.gene87798.t1 MTR_5g094430 55.274 237 88 4 79 303 65 295 6.79e-81 254
MS.gene87798.t1 MTR_5g094430 55.274 237 88 4 79 303 87 317 8.77e-81 255
MS.gene87798.t1 MTR_3g056100 54.472 246 79 3 72 300 91 320 9.66e-81 255
MS.gene87798.t1 MTR_3g056100 44.828 87 45 2 71 156 249 333 1.89e-14 75.1
MS.gene87798.t1 MTR_3g056100 54.472 246 79 3 72 300 235 464 3.83e-80 258
MS.gene87798.t1 MTR_3g056100 50.725 69 33 1 71 138 393 461 1.60e-14 75.9
MS.gene87798.t1 MTR_5g094430 55.274 237 88 4 79 303 199 429 7.00e-80 256
MS.gene87798.t1 MTR_3g056100 52.308 260 76 5 72 300 91 333 1.07e-79 253
MS.gene87798.t1 MTR_3g056100 44.828 87 45 2 71 156 262 346 1.83e-14 75.1
MS.gene87798.t1 MTR_3g009470 49.827 289 84 5 79 308 279 565 2.43e-79 258
MS.gene87798.t1 MTR_3g009470 41.667 108 46 4 69 163 474 577 1.34e-15 79.3
MS.gene87798.t1 MTR_3g056100 52.308 260 76 5 72 300 235 477 5.93e-79 255
MS.gene87798.t1 MTR_3g056100 50.725 69 33 1 71 138 406 474 1.63e-14 75.9
MS.gene87798.t1 MTR_7g011820 50.534 281 92 7 77 326 225 489 3.02e-78 251
MS.gene87798.t1 MTR_4g082580 44.262 305 125 8 12 300 65 340 1.75e-75 240
MS.gene87798.t1 MTR_3g031220 61.538 208 65 6 64 258 180 385 3.06e-74 236
MS.gene87798.t1 MTR_3g031220 50.667 75 32 2 229 299 185 258 1.55e-15 78.2
MS.gene87798.t1 MTR_7g080020 49.286 280 85 6 77 300 277 555 1.24e-72 242
MS.gene87798.t1 MTR_7g100510 50.000 240 96 5 77 297 186 420 2.05e-68 223
MS.gene87798.t1 MTR_7g100510 51.613 62 29 1 81 141 362 423 1.25e-13 72.4
MS.gene87798.t1 MTR_7g080000 47.426 272 81 7 80 300 234 494 2.44e-67 226
MS.gene87798.t1 MTR_7g080000 57.143 63 22 3 237 297 233 292 2.12e-12 69.3
MS.gene87798.t1 MTR_5g097490 42.636 258 134 5 72 323 84 333 2.15e-55 187
MS.gene87798.t1 MTR_3g009470 44.351 239 72 5 79 258 279 515 4.29e-49 174
MS.gene87798.t1 MTR_3g009470 53.333 60 27 1 238 297 280 338 4.55e-12 68.2
MS.gene87798.t1 MTR_4g130900 39.669 242 129 5 79 304 185 425 2.17e-43 158
MS.gene87798.t1 MTR_5g097500 33.607 244 135 4 67 302 70 294 2.04e-38 140
MS.gene87798.t1 MTR_1g077780 63.529 85 31 0 215 299 39 123 1.61e-33 122
MS.gene87798.t1 MTR_1g077780 43.182 88 39 2 80 166 62 139 3.44e-15 72.8
MS.gene87798.t1 MTR_8g007270 56.250 80 35 0 215 294 131 210 3.19e-27 108
MS.gene87798.t1 MTR_8g007270 56.140 57 24 1 80 135 154 210 5.42e-14 71.2
MS.gene87798.t1 MTR_7g109800 56.627 83 35 1 222 303 129 211 5.36e-26 107
MS.gene87798.t1 MTR_7g109800 47.727 88 39 2 80 160 145 232 2.30e-17 82.4
MS.gene87798.t1 MTR_3g095080 59.459 74 30 0 221 294 127 200 5.51e-26 105
MS.gene87798.t1 MTR_3g095080 48.684 76 36 2 80 154 144 217 4.19e-14 71.6
MS.gene87798.t1 MTR_3g095080 59.459 74 30 0 221 294 151 224 6.35e-26 105
MS.gene87798.t1 MTR_3g095080 48.684 76 36 2 80 154 168 241 3.72e-14 72.0
MS.gene87798.t1 MTR_3g104750 56.579 76 33 0 219 294 85 160 6.44e-26 103
MS.gene87798.t1 MTR_3g104750 53.448 58 26 1 80 136 104 161 8.88e-15 72.0
MS.gene87798.t1 MTR_4g094588 52.525 99 44 2 224 321 164 260 6.98e-26 107
MS.gene87798.t1 MTR_4g094588 52.000 75 35 1 69 142 167 241 2.65e-16 79.7
MS.gene87798.t1 MTR_1g086790 48.485 99 43 1 222 320 142 232 1.39e-25 106
MS.gene87798.t1 MTR_1g086790 54.688 64 28 1 80 142 158 221 5.64e-16 79.0
MS.gene87798.t1 MTR_8g092010 56.164 73 32 0 225 297 95 167 4.27e-25 101
MS.gene87798.t1 MTR_8g092010 48.684 76 33 2 69 138 92 167 2.97e-14 71.2
MS.gene87798.t1 MTR_8g096730 47.000 100 50 2 219 317 51 148 5.33e-25 100
MS.gene87798.t1 MTR_8g096730 48.387 62 31 1 80 140 70 131 1.60e-13 68.2
MS.gene87798.t1 MTR_2g033820 58.442 77 32 0 222 298 187 263 5.38e-25 105
MS.gene87798.t1 MTR_2g033820 50.617 81 36 2 80 156 203 283 1.82e-16 80.9
MS.gene87798.t1 MTR_5g074200 56.471 85 35 1 64 146 202 286 5.70e-25 104
MS.gene87798.t1 MTR_5g074200 53.226 62 28 1 238 299 220 280 2.98e-14 73.6
MS.gene87798.t1 MTR_5g091390 59.259 81 32 1 224 303 143 223 1.01e-24 103
MS.gene87798.t1 MTR_5g091390 54.688 64 28 1 80 142 157 220 2.08e-14 73.9
MS.gene87798.t1 MTR_7g079010 52.632 95 37 1 200 294 111 197 1.09e-24 101
MS.gene87798.t1 MTR_7g079010 55.172 58 25 1 80 136 141 198 2.53e-14 72.0
MS.gene87798.t1 MTR_8g092140 58.667 75 30 1 221 294 142 216 1.85e-24 101
MS.gene87798.t1 MTR_8g092140 52.632 57 26 1 80 135 160 216 2.27e-13 69.7
MS.gene87798.t1 MTR_1g015140 59.211 76 30 1 219 294 84 158 1.95e-24 99.0
MS.gene87798.t1 MTR_1g015140 40.449 89 47 2 54 136 71 159 7.49e-14 69.3
MS.gene87798.t1 MTR_4g132430 53.488 86 39 1 215 299 104 189 7.47e-24 102
MS.gene87798.t1 MTR_4g132430 43.373 83 35 4 68 138 105 187 1.53e-11 65.9
MS.gene87798.t1 MTR_7g028415 61.765 68 26 0 229 296 84 151 1.07e-23 97.4
MS.gene87798.t1 MTR_7g028415 50.000 58 28 1 80 136 93 150 5.11e-13 67.4
MS.gene87798.t1 MTR_7g028710 61.765 68 26 0 229 296 84 151 1.07e-23 97.4
MS.gene87798.t1 MTR_7g028710 50.000 58 28 1 80 136 93 150 5.11e-13 67.4
MS.gene87798.t1 MTR_7g110720 52.941 85 39 1 222 305 173 257 3.05e-23 100
MS.gene87798.t1 MTR_7g110720 48.333 60 29 2 81 138 190 249 6.67e-11 63.9
MS.gene87798.t1 MTR_4g132430 53.488 86 39 1 215 299 238 323 3.46e-23 101
MS.gene87798.t1 MTR_4g132430 43.373 83 35 4 68 138 239 321 3.87e-11 65.1
MS.gene87798.t1 MTR_7g110720 52.941 85 39 1 222 305 200 284 3.82e-23 100
MS.gene87798.t1 MTR_7g110720 48.333 60 29 2 81 138 217 276 7.74e-11 63.9
MS.gene87798.t1 MTR_5g043880 56.757 74 32 0 221 294 107 180 9.77e-23 97.4
MS.gene87798.t1 MTR_5g043880 57.895 57 23 1 80 135 124 180 1.27e-13 71.2
MS.gene87798.t1 MTR_2g088000 53.571 84 38 1 217 299 328 411 2.16e-22 99.8
MS.gene87798.t1 MTR_4g122530 53.012 83 39 0 225 307 195 277 2.36e-22 98.6
MS.gene87798.t1 MTR_4g122530 38.739 111 65 2 80 189 208 316 1.76e-13 72.0
MS.gene87798.t1 MTR_4g094412 53.165 79 36 1 222 299 227 305 2.60e-22 99.0
MS.gene87798.t1 MTR_4g094412 44.086 93 47 3 51 138 211 303 2.58e-14 74.7
MS.gene87798.t1 MTR_4g094412 53.165 79 36 1 222 299 218 296 2.62e-22 99.0
MS.gene87798.t1 MTR_4g094412 44.086 93 47 3 51 138 202 294 2.24e-14 75.1
MS.gene87798.t1 MTR_2g023930 52.381 84 39 1 215 297 282 365 2.64e-22 99.4
MS.gene87798.t1 MTR_2g023930 50.000 60 28 2 81 138 306 365 1.57e-11 66.2
MS.gene87798.t1 MTR_4g107970 53.247 77 35 1 222 297 162 238 2.87e-22 99.4
MS.gene87798.t1 MTR_4g107970 50.000 60 28 2 81 138 179 238 3.57e-11 65.1
MS.gene87798.t1 MTR_4g107970 52.564 78 36 1 221 297 238 315 4.23e-22 99.0
MS.gene87798.t1 MTR_4g107970 50.000 60 28 2 81 138 256 315 4.23e-11 65.1
MS.gene87798.t1 MTR_3g095040 52.000 75 36 0 224 298 104 178 5.70e-22 93.6
MS.gene87798.t1 MTR_3g095040 51.667 60 28 1 80 138 118 177 6.05e-13 67.8
MS.gene87798.t1 MTR_7g009730 50.588 85 41 1 222 305 203 287 6.68e-22 98.2
MS.gene87798.t1 MTR_7g009730 51.724 58 26 2 81 136 220 277 4.00e-11 65.1
MS.gene87798.t1 MTR_3g053330 39.062 128 69 3 178 304 199 318 7.41e-22 97.4
MS.gene87798.t1 MTR_1g078260 37.500 152 80 4 144 294 167 304 4.20e-21 95.5
MS.gene87798.t1 MTR_1g078260 51.724 58 26 2 80 135 247 304 1.13e-11 66.6
MS.gene87798.t1 MTR_4g049790 53.086 81 37 1 220 299 294 374 7.00e-21 95.1
MS.gene87798.t1 MTR_4g094908 47.253 91 44 2 213 299 238 328 7.21e-20 90.5
MS.gene87798.t1 MTR_4g094908 50.877 57 26 2 81 135 267 323 7.86e-12 66.6
MS.gene87798.t1 MTR_6g086555 38.298 141 78 3 158 297 134 266 2.00e-19 90.1
MS.gene87798.t1 MTR_6g086555 46.154 65 33 2 81 143 207 271 1.32e-11 66.2
MS.gene87798.t1 MTR_1g009613 39.568 139 65 5 177 299 189 324 3.78e-19 88.2
MS.gene87798.t1 MTR_2g045360 46.667 90 46 2 225 313 198 286 9.49e-19 88.2
MS.gene87798.t1 MTR_4g049760 49.398 83 41 1 217 298 269 351 1.48e-18 88.2
MS.gene87798.t1 MTR_2g105060 53.125 64 29 1 236 298 92 155 2.17e-18 84.3
MS.gene87798.t1 MTR_2g105060 44.286 70 37 2 80 147 94 163 8.77e-14 70.9
MS.gene87798.t1 MTR_3g106060 38.298 141 59 7 178 294 59 195 2.91e-18 85.1
MS.gene87798.t1 MTR_3g106060 40.244 82 39 3 80 159 138 211 1.56e-11 65.1
MS.gene87798.t1 MTR_5g016610 41.121 107 51 2 202 296 152 258 3.73e-18 84.3
MS.gene87798.t1 MTR_5g016610 44.928 69 36 2 69 135 188 256 2.91e-11 63.9
MS.gene87798.t1 MTR_2g105060 53.125 64 29 1 236 298 167 230 4.02e-18 85.1
MS.gene87798.t1 MTR_2g105060 44.286 70 37 2 80 147 169 238 1.10e-13 72.0
MS.gene87798.t1 MTR_4g007060 40.777 103 56 3 236 333 126 228 6.26e-18 84.0
MS.gene87798.t1 MTR_4g007060 49.180 61 29 2 80 138 128 188 2.69e-13 70.1
MS.gene87798.t1 MTR_7g062220 59.649 57 23 0 238 294 124 180 8.39e-18 84.0
MS.gene87798.t1 MTR_7g062220 59.322 59 19 2 80 135 124 180 5.99e-15 75.5
MS.gene87798.t1 MTR_4g007060 40.777 103 56 3 236 333 160 262 1.17e-17 83.6
MS.gene87798.t1 MTR_4g007060 49.180 61 29 2 80 138 162 222 3.76e-13 70.1
MS.gene87798.t1 MTR_4g127040 43.137 102 53 2 206 302 209 310 1.20e-17 83.6
MS.gene87798.t1 MTR_8g067650 52.083 96 40 4 73 166 332 423 1.96e-17 84.7
MS.gene87798.t1 MTR_8g067650 41.463 82 42 2 236 311 337 418 3.52e-11 65.1
MS.gene87798.t1 MTR_6g046600 62.903 62 22 1 96 157 18 78 1.05e-16 76.3
MS.gene87798.t1 MTR_8g067635 50.000 96 42 4 73 166 342 433 2.53e-16 81.3
MS.gene87798.t1 MTR_8g067635 31.915 141 75 5 236 370 347 472 1.20e-11 66.6
MS.gene87798.t1 MTR_1g013790 45.205 73 39 1 226 297 89 161 3.39e-16 78.2
MS.gene87798.t1 MTR_1g013790 35.484 124 58 6 80 181 101 224 2.50e-12 67.0
MS.gene87798.t1 MTR_1g013760 30.178 169 100 5 225 383 125 285 8.80e-16 77.8
MS.gene87798.t1 MTR_1g013760 49.123 57 27 2 81 135 141 197 4.39e-11 63.5
MS.gene87798.t1 MTR_4g047580 35.606 132 75 3 217 347 260 382 1.19e-15 79.0
MS.gene87798.t1 MTR_1g070455 46.753 77 37 2 219 294 277 350 1.26e-15 78.2
MS.gene87798.t1 MTR_1g070455 50.847 59 27 2 81 137 294 352 2.84e-11 65.1
MS.gene87798.t1 MTR_8g069935 38.281 128 64 4 73 198 324 438 2.49e-15 77.8
MS.gene87798.t1 MTR_2g024350 52.778 72 32 2 73 142 1 72 1.14e-14 73.2
MS.gene87798.t1 MTR_2g024350 47.059 68 35 1 233 299 3 70 1.15e-12 67.4
MS.gene87798.t1 MTR_2g032030 46.914 81 41 2 239 317 268 348 1.65e-14 75.1
MS.gene87798.t1 MTR_2g032030 46.914 81 41 2 239 317 268 348 1.72e-14 75.5
MS.gene87798.t1 MTR_8g087000 39.535 86 45 2 239 323 78 157 2.98e-14 72.4
MS.gene87798.t1 MTR_8g087000 39.535 86 45 2 239 323 77 156 3.29e-14 72.4
MS.gene87798.t1 MTR_7g109600 46.970 66 34 1 239 303 54 119 3.71e-14 72.4
MS.gene87798.t1 MTR_7g109600 53.333 60 26 2 81 138 54 113 1.04e-12 68.2
MS.gene87798.t1 MTR_8g028565 42.222 90 42 2 239 327 156 236 3.96e-14 73.6
MS.gene87798.t1 MTR_8g028565 42.647 68 37 2 73 138 148 215 7.71e-11 63.5
MS.gene87798.t1 MTR_2g024380 51.389 72 33 2 73 142 244 315 1.47e-13 72.4
MS.gene87798.t1 MTR_2g024380 47.761 67 34 1 233 298 246 312 8.68e-12 67.0
MS.gene87798.t1 MTR_8g098945 42.529 87 48 2 237 321 128 214 1.62e-13 70.9
MS.gene87798.t1 MTR_8g098945 38.144 97 56 3 81 175 130 224 3.49e-13 69.7
MS.gene87798.t1 MTR_7g079040 41.860 86 40 2 239 323 155 231 5.45e-13 69.7
MS.gene87798.t1 MTR_3g108960 32.624 141 83 3 167 295 232 372 6.49e-13 70.1
MS.gene87798.t1 MTR_1g099600 37.778 90 54 2 216 304 164 252 6.87e-13 69.3
MS.gene87798.t1 MTR_1g077760 61.364 44 17 0 215 258 91 134 7.78e-13 65.9
MS.gene87798.t1 MTR_2g016770 47.619 63 32 1 239 300 36 98 9.31e-13 67.4
MS.gene87798.t1 MTR_2g016770 37.255 102 61 3 81 179 36 137 2.11e-12 66.6
MS.gene87798.t1 MTR_2g016770 47.619 63 32 1 239 300 28 90 1.15e-12 67.0
MS.gene87798.t1 MTR_2g016770 37.255 102 61 3 81 179 28 129 1.73e-12 66.6
MS.gene87798.t1 MTR_0117s0040 37.838 111 62 3 210 315 46 154 1.34e-12 67.8
MS.gene87798.t1 MTR_2g083870 46.032 63 33 1 239 300 81 143 2.14e-12 67.4
MS.gene87798.t1 MTR_5g044695 52.000 50 24 0 215 264 54 103 2.35e-12 63.5
MS.gene87798.t1 MTR_6g053200 48.529 68 33 2 73 138 323 390 1.06e-11 67.0
MS.gene87798.t1 MTR_8g099350 53.448 58 23 2 80 133 132 189 1.09e-11 66.2
MS.gene87798.t1 MTR_4g021780 43.421 76 42 1 64 139 7 81 1.79e-11 61.2
MS.gene87798.t1 MTR_5g093540 44.000 75 26 1 72 146 150 208 2.58e-11 63.9
MS.gene87798.t1 MTR_3g090860 50.000 58 25 2 80 133 133 190 2.74e-11 64.7
MS.gene87798.t1 MTR_5g067680 48.276 58 26 2 80 133 202 259 4.20e-11 64.3
MS.gene87798.t1 MTR_6g038890 52.000 50 24 0 215 264 165 214 7.87e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87798.t1 AT2G38470 53.390 354 130 7 74 405 178 518 8.10e-110 332
MS.gene87798.t1 AT2G03340 55.422 249 95 4 79 316 249 492 4.90e-85 268
MS.gene87798.t1 AT1G13960 56.017 241 84 4 79 297 75 315 1.09e-81 255
MS.gene87798.t1 AT1G13960 54.618 249 91 4 71 297 220 468 4.60e-81 258
MS.gene87798.t1 AT5G07100 56.485 239 61 5 70 307 107 303 1.97e-79 248
MS.gene87798.t1 AT5G07100 55.649 239 63 5 70 307 14 210 2.12e-79 244
MS.gene87798.t1 AT5G07100 55.649 239 63 5 70 307 14 210 2.12e-79 244
MS.gene87798.t1 AT5G07100 55.649 239 63 5 70 307 14 210 2.12e-79 244
MS.gene87798.t1 AT5G07100 55.649 239 63 5 70 307 14 210 2.12e-79 244
MS.gene87798.t1 AT2G30250 56.277 231 89 3 77 299 163 389 5.81e-78 246
MS.gene87798.t1 AT2G30250 53.846 65 29 1 81 144 329 393 1.89e-14 75.1
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 34 274 2.45e-77 244
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 34 274 2.45e-77 244
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 34 274 2.45e-77 244
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 34 274 2.45e-77 244
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 170 410 1.62e-76 246
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 138 378 1.72e-76 245
MS.gene87798.t1 AT4G26640 50.617 243 104 3 79 307 210 450 6.41e-76 246
MS.gene87798.t1 AT3G01080 51.598 219 87 2 79 297 204 403 1.75e-71 232
MS.gene87798.t1 AT3G01080 51.598 219 87 2 79 297 166 365 1.91e-71 231
MS.gene87798.t1 AT4G26440 49.618 262 88 6 79 300 177 434 7.57e-67 223
MS.gene87798.t1 AT4G26440 46.250 80 38 2 80 156 372 449 1.61e-12 69.7
MS.gene87798.t1 AT2G04880 41.538 260 115 5 73 307 105 352 1.92e-60 203
MS.gene87798.t1 AT2G04880 40.364 275 121 6 73 307 105 376 5.18e-60 202
MS.gene87798.t1 AT2G37260 44.939 247 108 6 77 296 82 327 2.72e-53 181
MS.gene87798.t1 AT2G37260 54.098 61 27 1 239 299 86 145 2.41e-13 71.2
MS.gene87798.t1 AT2G37260 44.939 247 108 6 77 296 80 325 3.00e-53 181
MS.gene87798.t1 AT2G37260 54.098 61 27 1 239 299 84 143 2.52e-13 71.2
MS.gene87798.t1 AT4G30935 43.162 234 118 6 81 304 169 397 5.77e-48 170
MS.gene87798.t1 AT4G30935 39.316 117 64 3 81 192 332 446 3.52e-16 80.5
MS.gene87798.t1 AT5G56270 75.000 104 19 2 200 300 450 549 2.91e-46 169
MS.gene87798.t1 AT5G56270 73.913 69 18 0 79 147 272 340 3.62e-28 117
MS.gene87798.t1 AT5G56270 48.611 72 34 2 238 308 273 342 3.80e-13 71.6
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 3.37e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 3.37e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 3.71e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 4.24e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 4.40e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 4.40e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 4.48e-41 156
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 381 594 4.50e-41 155
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 4.76e-41 155
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 4.80e-41 155
MS.gene87798.t1 AT4G12020 42.056 214 109 3 60 258 448 661 7.16e-41 155
MS.gene87798.t1 AT1G55600 61.446 83 32 0 217 299 286 368 1.08e-27 114
MS.gene87798.t1 AT1G55600 57.377 61 25 1 81 140 308 368 2.11e-16 81.3
MS.gene87798.t1 AT2G44745 45.378 119 53 4 186 298 92 204 1.45e-27 109
MS.gene87798.t1 AT2G44745 56.140 57 24 1 80 135 145 201 5.18e-14 71.2
MS.gene87798.t1 AT4G39410 50.485 103 44 1 219 321 204 299 2.34e-27 110
MS.gene87798.t1 AT4G39410 50.877 57 27 1 80 135 223 279 2.76e-12 67.4
MS.gene87798.t1 AT1G29860 59.524 84 33 1 222 304 120 203 4.57e-27 109
MS.gene87798.t1 AT1G29860 56.061 66 28 1 80 144 136 201 1.15e-16 80.1
MS.gene87798.t1 AT4G18170 61.039 77 30 0 222 298 156 232 4.85e-27 110
MS.gene87798.t1 AT5G46350 56.098 82 36 0 224 305 169 250 5.73e-26 107
MS.gene87798.t1 AT5G46350 56.061 66 27 2 80 144 183 247 7.98e-16 78.6
MS.gene87798.t1 AT2G37260 74.194 62 16 0 77 138 162 223 1.27e-25 108
MS.gene87798.t1 AT2G37260 54.098 61 27 1 239 299 166 225 3.94e-13 71.2
MS.gene87798.t1 AT5G64810 60.563 71 28 0 225 295 97 167 4.20e-25 101
MS.gene87798.t1 AT5G64810 52.632 57 26 1 80 135 110 166 7.02e-13 67.4
MS.gene87798.t1 AT5G41570 59.211 76 31 0 219 294 79 154 6.54e-25 100
MS.gene87798.t1 AT5G41570 51.724 58 27 1 80 136 98 155 1.45e-13 68.9
MS.gene87798.t1 AT3G01080 69.231 65 19 1 79 143 204 267 7.40e-25 104
MS.gene87798.t1 AT3G01080 49.254 67 33 1 238 304 205 270 1.81e-12 68.2
MS.gene87798.t1 AT5G13080 59.722 72 29 0 225 296 54 125 8.21e-25 99.4
MS.gene87798.t1 AT5G13080 48.387 62 31 1 80 140 67 128 3.85e-14 69.7
MS.gene87798.t1 AT2G47260 40.441 136 59 2 222 356 158 272 1.02e-24 104
MS.gene87798.t1 AT2G47260 51.562 64 30 1 80 142 174 237 2.04e-14 74.3
MS.gene87798.t1 AT5G26170 60.000 70 28 0 225 294 100 169 1.19e-24 100
MS.gene87798.t1 AT5G26170 50.877 57 27 1 80 135 113 169 1.72e-13 68.6
MS.gene87798.t1 AT4G04450 55.814 86 37 1 215 299 175 260 1.44e-24 105
MS.gene87798.t1 AT4G04450 36.937 111 46 4 50 138 150 258 5.74e-11 64.3
MS.gene87798.t1 AT5G49520 55.952 84 36 1 222 304 205 288 2.31e-24 104
MS.gene87798.t1 AT5G49520 47.436 78 40 1 80 156 221 298 8.56e-15 75.9
MS.gene87798.t1 AT1G64000 57.895 76 32 0 219 294 95 170 2.79e-24 99.8
MS.gene87798.t1 AT1G64000 51.724 58 27 1 80 136 114 171 8.48e-14 70.1
MS.gene87798.t1 AT3G01970 61.111 72 28 0 225 296 52 123 5.50e-24 97.4
MS.gene87798.t1 AT3G01970 49.231 65 30 2 80 141 65 129 1.32e-12 65.5
MS.gene87798.t1 AT4G04450 55.814 86 37 1 215 299 269 354 6.05e-24 104
MS.gene87798.t1 AT4G04450 48.333 60 29 2 81 138 293 352 9.72e-11 63.9
MS.gene87798.t1 AT1G69310 53.846 78 36 0 217 294 126 203 2.87e-23 99.0
MS.gene87798.t1 AT1G69310 57.895 57 23 1 80 135 147 203 4.97e-14 72.4
MS.gene87798.t1 AT1G69310 53.846 78 36 0 217 294 126 203 2.87e-23 99.0
MS.gene87798.t1 AT1G69310 57.895 57 23 1 80 135 147 203 4.97e-14 72.4
MS.gene87798.t1 AT1G69310 53.846 78 36 0 217 294 126 203 2.87e-23 99.0
MS.gene87798.t1 AT1G69310 57.895 57 23 1 80 135 147 203 4.97e-14 72.4
MS.gene87798.t1 AT5G15130 55.128 78 34 1 221 297 168 245 3.30e-23 102
MS.gene87798.t1 AT2G46130 53.750 80 37 0 215 294 7 86 4.15e-23 93.6
MS.gene87798.t1 AT2G46130 55.172 58 25 1 80 136 30 87 2.63e-15 72.0
MS.gene87798.t1 AT5G15130 55.128 78 34 1 221 297 210 287 4.23e-23 101
MS.gene87798.t1 AT1G68150 50.000 90 44 1 216 304 213 302 7.39e-23 99.8
MS.gene87798.t1 AT1G62300 54.217 83 37 1 216 297 290 372 1.16e-22 100
MS.gene87798.t1 AT1G62300 38.462 104 49 5 50 138 269 372 2.29e-11 65.9
MS.gene87798.t1 AT4G22070 53.571 84 38 1 215 297 274 357 1.79e-22 99.8
MS.gene87798.t1 AT4G22070 53.571 84 38 1 215 297 274 357 1.79e-22 99.8
MS.gene87798.t1 AT4G22070 53.571 84 38 1 215 297 274 357 1.79e-22 99.8
MS.gene87798.t1 AT4G22070 53.571 84 38 1 215 297 274 357 1.79e-22 99.8
MS.gene87798.t1 AT2G21900 45.745 94 48 1 227 317 95 188 2.41e-22 94.4
MS.gene87798.t1 AT2G21900 47.059 68 35 1 72 138 101 168 1.54e-15 75.5
MS.gene87798.t1 AT3G62340 44.144 111 61 1 222 331 102 212 2.77e-21 93.2
MS.gene87798.t1 AT3G62340 51.667 60 28 1 80 138 118 177 3.65e-13 69.7
MS.gene87798.t1 AT1G18860 52.564 78 36 1 221 297 222 299 6.12e-21 95.1
MS.gene87798.t1 AT4G01720 53.247 77 35 1 222 297 223 299 9.10e-20 91.7
MS.gene87798.t1 AT2G23320 42.202 109 49 3 202 296 191 299 1.56e-19 89.0
MS.gene87798.t1 AT2G23320 52.632 57 25 2 81 135 241 297 5.65e-11 63.9
MS.gene87798.t1 AT4G24240 36.129 155 85 4 148 296 194 340 2.73e-19 89.0
MS.gene87798.t1 AT4G24240 52.632 57 25 2 81 135 282 338 5.21e-12 67.0
MS.gene87798.t1 AT1G69310 48.718 78 36 1 217 294 126 199 7.81e-19 86.7
MS.gene87798.t1 AT2G46130 50.000 80 36 1 215 294 7 82 1.02e-18 81.6
MS.gene87798.t1 AT1G80840 42.529 87 48 2 236 321 144 229 2.29e-18 85.5
MS.gene87798.t1 AT1G80840 49.180 61 29 2 80 138 146 206 1.27e-13 71.6
MS.gene87798.t1 AT4G31800 53.125 64 29 1 237 299 110 173 7.76e-18 82.8
MS.gene87798.t1 AT4G31800 44.262 61 32 2 80 138 111 171 3.25e-11 63.5
MS.gene87798.t1 AT4G31550 51.282 78 34 2 219 295 230 304 8.36e-18 84.3
MS.gene87798.t1 AT4G31550 54.386 57 24 2 81 135 247 303 3.48e-11 64.3
MS.gene87798.t1 AT4G31550 51.282 78 34 2 219 295 229 303 8.75e-18 84.0
MS.gene87798.t1 AT4G31550 54.386 57 24 2 81 135 246 302 3.52e-11 64.3
MS.gene87798.t1 AT4G31800 53.125 64 29 1 237 299 175 238 1.46e-17 83.2
MS.gene87798.t1 AT4G31800 44.262 61 32 2 80 138 176 236 5.94e-11 63.5
MS.gene87798.t1 AT2G24570 53.247 77 32 2 219 294 227 300 1.84e-17 83.2
MS.gene87798.t1 AT2G24570 54.386 57 24 2 81 135 244 300 3.12e-11 64.7
MS.gene87798.t1 AT2G30590 36.478 159 82 5 150 294 217 370 2.28e-17 83.6
MS.gene87798.t1 AT2G30590 50.847 59 27 2 81 137 314 372 2.35e-11 65.5
MS.gene87798.t1 AT5G43290 57.627 59 25 0 236 294 112 170 4.78e-17 81.3
MS.gene87798.t1 AT5G43290 61.404 57 21 1 80 135 114 170 6.98e-16 77.8
MS.gene87798.t1 AT5G28650 48.052 77 36 2 219 294 246 319 7.67e-17 81.6
MS.gene87798.t1 AT2G25000 48.438 64 32 1 237 299 102 165 1.29e-16 79.0
MS.gene87798.t1 AT2G25000 30.000 120 74 4 80 191 103 220 1.18e-11 64.7
MS.gene87798.t1 AT2G25000 48.438 64 32 1 237 299 102 165 1.29e-16 79.0
MS.gene87798.t1 AT2G25000 30.000 120 74 4 80 191 103 220 1.18e-11 64.7
MS.gene87798.t1 AT3G04670 35.294 153 86 5 150 294 172 319 1.33e-16 80.9
MS.gene87798.t1 AT2G25000 48.438 64 32 1 237 299 124 187 1.98e-16 79.0
MS.gene87798.t1 AT2G25000 30.000 120 74 4 80 191 125 242 1.74e-11 64.3
MS.gene87798.t1 AT2G25000 48.438 64 32 1 237 299 145 208 2.90e-16 79.0
MS.gene87798.t1 AT2G25000 30.000 120 74 4 80 191 146 263 2.22e-11 64.3
MS.gene87798.t1 AT1G69810 45.455 88 44 3 221 304 128 215 4.64e-16 79.0
MS.gene87798.t1 AT1G69810 45.455 88 44 3 221 304 186 273 6.74e-16 79.3
MS.gene87798.t1 AT4G23550 45.333 75 40 1 227 300 129 203 9.31e-16 78.2
MS.gene87798.t1 AT4G23550 30.986 142 85 4 64 192 124 265 4.08e-11 63.9
MS.gene87798.t1 AT5G52830 36.792 106 65 2 216 320 144 248 6.58e-14 72.8
MS.gene87798.t1 AT5G52830 45.588 68 35 2 73 138 158 225 6.90e-12 66.6
MS.gene87798.t1 AT4G01250 52.381 63 29 1 239 300 129 191 8.67e-14 72.0
MS.gene87798.t1 AT4G01250 30.952 126 72 3 73 183 121 246 1.91e-12 68.2
MS.gene87798.t1 AT2G34830 45.588 68 36 1 236 302 213 280 4.17e-13 70.9
MS.gene87798.t1 AT2G34830 44.286 70 38 1 236 304 222 291 4.78e-13 70.9
MS.gene87798.t1 AT1G30650 47.692 65 33 1 239 302 218 282 5.18e-13 70.9
MS.gene87798.t1 AT1G29280 48.333 60 30 1 239 297 75 134 7.53e-13 68.6
MS.gene87798.t1 AT3G58710 35.652 115 64 2 195 299 19 133 6.06e-12 66.2
MS.gene87798.t1 AT3G58710 45.205 73 38 2 81 151 72 144 6.00e-11 63.2
MS.gene87798.t1 AT3G58710 46.774 62 32 1 239 299 71 132 7.42e-12 65.9
MS.gene87798.t1 AT3G58710 45.205 73 38 2 81 151 71 143 6.58e-11 63.2
MS.gene87798.t1 AT5G45050 44.776 67 36 1 239 304 1181 1247 2.35e-11 66.2
MS.gene87798.t1 AT5G45050 44.776 67 36 1 239 304 1153 1219 2.45e-11 66.2
MS.gene87798.t1 AT5G45050 47.619 63 32 1 239 300 1042 1104 2.57e-11 66.2
MS.gene87798.t1 AT2G46400 38.889 108 53 6 80 179 104 206 4.25e-11 63.9
MS.gene87798.t1 AT2G40750 30.435 184 104 8 61 220 133 316 6.31e-11 63.9

Find 84 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGGGTCATGGAAATTT+TGG 0.121536 7.1:+31084373 MS.gene87798:CDS
ACTGAATTACTATGTATTTC+TGG 0.148019 7.1:-31083102 None:intergenic
AATTACTGAAATTGTGTATA+AGG 0.218480 7.1:+31083323 MS.gene87798:CDS
CTCAGATGCTGCTTACTTAA+AGG 0.223594 7.1:+31084447 MS.gene87798:CDS
CTTCTATTAGATTGAGGCTT+AGG 0.244236 7.1:-31083360 None:intergenic
TATGGTCAGAAAGTTGTTAA+AGG 0.320018 7.1:+31083798 MS.gene87798:CDS
ATTGGTGAAACTTGCTGAAT+TGG 0.326542 7.1:-31084287 None:intergenic
ATATCCTTGATGATGGCTTT+AGG 0.338446 7.1:+31083766 MS.gene87798:CDS
ACATCACAAACTAGTTATTC+TGG 0.338708 7.1:+31083504 MS.gene87798:CDS
CTATGTATTTCTGGTTTGAT+TGG 0.340505 7.1:-31083093 None:intergenic
GGTTACAATTGGAGAAAATA+TGG 0.346189 7.1:+31083198 MS.gene87798:CDS
CGCTGATTGATCAGAAATTC+CGG 0.347931 7.1:-31083418 None:intergenic
GGCTTTAGGTGGAGAAAATA+TGG 0.350202 7.1:+31083780 MS.gene87798:CDS
GCAGCATACCAGCGCCTATT+AGG 0.353432 7.1:+31084242 MS.gene87798:CDS
TGTTCAGAGAATTTCTGTTC+AGG 0.353921 7.1:-31084216 None:intergenic
ATACATAGTAATTCAGTTAC+TGG 0.366718 7.1:+31083108 MS.gene87798:CDS
AGGTTAAGAAACAGGATATA+TGG 0.374930 7.1:+31082971 MS.gene87798:CDS
TTCACCGCTGAGGGCCTAAT+AGG 0.377251 7.1:-31084256 None:intergenic
ATTTCCACAGGACATGTTGC+AGG 0.392763 7.1:+31084357 MS.gene87798:CDS
TTCTATTAGATTGAGGCTTA+GGG 0.403532 7.1:-31083359 None:intergenic
GGTATTATTATAAAGTGAAT+TGG 0.413103 7.1:-31084305 None:intergenic
TTCCACAAACATGTTTCAAC+AGG 0.417283 7.1:+31082248 None:intergenic
CGAGTTAATTACCTTGCATT+GGG 0.417999 7.1:-31083825 None:intergenic
CCTGCAGCACCGCGTGCTGC+TGG 0.419054 7.1:-31084187 None:intergenic
ACTTCCTGCCAACGGAAATC+AGG 0.420002 7.1:+31084330 MS.gene87798:CDS
AGTAATTCAGTTACTGGATC+TGG 0.426304 7.1:+31083114 MS.gene87798:CDS
TCAGGAACAGGTTAAGAAAC+AGG 0.430648 7.1:+31082963 MS.gene87798:intron
GATCAGAAGATGGTTACAAT+TGG 0.435599 7.1:+31083187 MS.gene87798:CDS
GTCATCCTTCCGCTCATCCT+TGG 0.436454 7.1:-31084470 None:intergenic
AGCTGAAGAATCTTCTTGTA+TGG 0.436941 7.1:-31083454 None:intergenic
AACTCCTGATTTCCGTTGGC+AGG 0.438505 7.1:-31084334 None:intergenic
CCAGCAGCACGCGGTGCTGC+AGG 0.442471 7.1:+31084187 MS.gene87798:CDS
ATTACTGAAATTGTGTATAA+GGG 0.445907 7.1:+31083324 MS.gene87798:CDS
AAGAATAGCTCTGAGTTGAT+TGG 0.464332 7.1:-31083059 None:intergenic
AAAGTCGAGAAGGATTTAGA+TGG 0.467711 7.1:+31083297 MS.gene87798:CDS
ATTTCCGTTGGCAGGAAGTC+CGG 0.470594 7.1:-31084326 None:intergenic
ACGAGTTAATTACCTTGCAT+TGG 0.471250 7.1:-31083826 None:intergenic
TTCATCTCTCGGAAGATCAA+TGG 0.478124 7.1:+31084399 MS.gene87798:CDS
TTCTTCAGCTTCTGTGGGAG+AGG 0.479406 7.1:+31083467 MS.gene87798:CDS
GTAGTTTGAACTACAACTCT+AGG 0.492620 7.1:-31083732 None:intergenic
AATTCACTTTATAATAATAC+CGG 0.494143 7.1:+31084307 MS.gene87798:CDS
CCCTTCGTAAGTTGTGATCA+CGG 0.496994 7.1:-31084146 None:intergenic
TATTACAAATGCACTGCCCC+TGG 0.499056 7.1:+31084076 MS.gene87798:CDS
AGAAGATTCTTCAGCTTCTG+TGG 0.510110 7.1:+31083461 MS.gene87798:CDS
CAGGACATGTTGCAGGGTCA+TGG 0.513437 7.1:+31084364 MS.gene87798:CDS
ATCTGAGTATTGTGAATGAT+TGG 0.513956 7.1:-31084431 None:intergenic
GAAATTGATATCCTTGATGA+TGG 0.516687 7.1:+31083759 MS.gene87798:CDS
TTTGTTCTTCTATTAGATTG+AGG 0.518744 7.1:-31083366 None:intergenic
GAAGGGTGATAATGAAAATG+AGG 0.537668 7.1:+31083674 MS.gene87798:CDS
TTGTACCAGAGGCGAAAAGA+TGG 0.551787 7.1:+31083544 MS.gene87798:CDS
GAGTTAGTGCATGATGAAGT+AGG 0.552236 7.1:-31083396 None:intergenic
GAAGATTCTTCAGCTTCTGT+GGG 0.555145 7.1:+31083462 MS.gene87798:CDS
GAATAACAGTTCACCGCTGA+GGG 0.557266 7.1:-31084265 None:intergenic
GAACAAAGGAGATCAGAAGA+TGG 0.567232 7.1:+31083177 MS.gene87798:CDS
TGCTGCTTACTTAAAGGCCA+AGG 0.570021 7.1:+31084453 MS.gene87798:CDS
AAATAACTCCTGATTTCCGT+TGG 0.574081 7.1:-31084338 None:intergenic
CGCGTGCTGCTGGTACGTCA+TGG 0.575170 7.1:-31084177 None:intergenic
AAATCAGGAGTTATTTCCAC+AGG 0.592695 7.1:+31084345 MS.gene87798:CDS
TCCTTGATGATGGCTTTAGG+TGG 0.594532 7.1:+31083769 MS.gene87798:CDS
TCCACCTAAAGCCATCATCA+AGG 0.597161 7.1:-31083770 None:intergenic
GCTGAGGGCCTAATAGGCGC+TGG 0.598191 7.1:-31084250 None:intergenic
AAATGAGGGCTATTGTGCCT+CGG 0.599243 7.1:+31083689 MS.gene87798:CDS
ACTTCATCATGCACTAACTC+CGG 0.601569 7.1:+31083399 MS.gene87798:CDS
TTTCCACAGGACATGTTGCA+GGG 0.604747 7.1:+31084358 MS.gene87798:CDS
AATTTCTGATCAATCAGCGA+TGG 0.607277 7.1:+31083422 MS.gene87798:CDS
TATTAGATTGAGGCTTAGGG+TGG 0.608282 7.1:-31083356 None:intergenic
CTCAATCTGTTAGAGAACAA+AGG 0.613228 7.1:+31083163 MS.gene87798:CDS
AAAGGCCAAGGATGAGCGGA+AGG 0.616534 7.1:+31084465 MS.gene87798:CDS
CGTTTGACAGAAATGACTGA+AGG 0.620216 7.1:-31084498 None:intergenic
TATGGACAGAAACAAGTGAA+AGG 0.621665 7.1:+31083216 MS.gene87798:CDS
TTAAAGGAAATCCCAATGCA+AGG 0.622034 7.1:+31083814 MS.gene87798:CDS
AAGGGTGATAATGAAAATGA+GGG 0.631414 7.1:+31083675 MS.gene87798:CDS
GGAATAACAGTTCACCGCTG+AGG 0.643487 7.1:-31084266 None:intergenic
TTTAACAGTTCTACTAGCCG+AGG 0.646431 7.1:-31083706 None:intergenic
TGACAACGCCCTTGTACCAG+AGG 0.647629 7.1:+31083533 MS.gene87798:CDS
ACTTAAAGGCCAAGGATGAG+CGG 0.651060 7.1:+31084461 MS.gene87798:CDS
CCGTGATCACAACTTACGAA+GGG 0.654251 7.1:+31084146 MS.gene87798:CDS
GCCGTGATCACAACTTACGA+AGG 0.661238 7.1:+31084145 MS.gene87798:CDS
AATACCGGACTTCCTGCCAA+CGG 0.666996 7.1:+31084322 MS.gene87798:CDS
TCACAAACTAGTTATTCTGG+AGG 0.672894 7.1:+31083507 MS.gene87798:CDS
TGACCCTGCAACATGTCCTG+TGG 0.679335 7.1:-31084361 None:intergenic
AGCGCCTATTAGGCCCTCAG+CGG 0.697644 7.1:+31084252 MS.gene87798:CDS
CATGACGTACCAGCAGCACG+CGG 0.718504 7.1:+31084178 MS.gene87798:CDS
GTGCACTTGTAATAACTACG+CGG 0.790555 7.1:-31083249 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAAAATTAATAAGTTA+AGG - chr7.1:31084043-31084062 None:intergenic 10.0%
!! AATTCACTTTATAATAATAC+CGG + chr7.1:31084307-31084326 MS.gene87798:CDS 15.0%
!! AATTACTGAAATTGTGTATA+AGG + chr7.1:31083323-31083342 MS.gene87798:CDS 20.0%
!! ATTACTGAAATTGTGTATAA+GGG + chr7.1:31083324-31083343 MS.gene87798:CDS 20.0%
!! GGTAAGATATAAACAATTTA+AGG + chr7.1:31083565-31083584 MS.gene87798:intron 20.0%
!! GGTATTATTATAAAGTGAAT+TGG - chr7.1:31084308-31084327 None:intergenic 20.0%
!!! CAACAATTTAAAGTAAAACA+AGG + chr7.1:31082801-31082820 MS.gene87798:intron 20.0%
!!! GAATTAATTTTGCTTTTTTC+TGG + chr7.1:31082329-31082348 MS.gene87798:intron 20.0%
!!! TAAAACAAGGTTTAGTTTAT+TGG + chr7.1:31082814-31082833 MS.gene87798:intron 20.0%
!!! TTAATTTTTTCAAAATCTGC+AGG + chr7.1:31084050-31084069 MS.gene87798:intron 20.0%
!!! TTCTTGTTTTAGTATAAACA+AGG + chr7.1:31082641-31082660 MS.gene87798:intron 20.0%
!!! TTTTTGTTTACTGTTTTTGA+TGG + chr7.1:31082572-31082591 MS.gene87798:intron 20.0%
! ACTGAATTACTATGTATTTC+TGG - chr7.1:31083105-31083124 None:intergenic 25.0%
! AGAACAAATAAAGCTATGTT+TGG - chr7.1:31082507-31082526 None:intergenic 25.0%
! ATACATAGTAATTCAGTTAC+TGG + chr7.1:31083108-31083127 MS.gene87798:CDS 25.0%
! CTAGTATATTCTTAAGTCTT+AGG + chr7.1:31082699-31082718 MS.gene87798:intron 25.0%
! TTCTATCACAAACCATATTT+CGG - chr7.1:31082841-31082860 None:intergenic 25.0%
! TTTATTTGTTCTAACCTCAT+TGG + chr7.1:31082515-31082534 MS.gene87798:intron 25.0%
! TTTGTTCTTCTATTAGATTG+AGG - chr7.1:31083369-31083388 None:intergenic 25.0%
! TTTGTTGAATAGTTCAAACA+AGG + chr7.1:31082664-31082683 MS.gene87798:intron 25.0%
!! ATCATTTTGTGTGTTATCTA+GGG + chr7.1:31082299-31082318 MS.gene87798:intron 25.0%
!! TAGTCAATAAGTTCTAACTT+GGG + chr7.1:31083865-31083884 MS.gene87798:intron 25.0%
!! TATCATTTTGTGTGTTATCT+AGG + chr7.1:31082298-31082317 MS.gene87798:intron 25.0%
!! TTAGTCAATAAGTTCTAACT+TGG + chr7.1:31083864-31083883 MS.gene87798:intron 25.0%
!! TTTTTCTTCATTGAGCAATT+TGG - chr7.1:31083279-31083298 None:intergenic 25.0%
AATGAAGAAAAAAGTCGAGA+AGG + chr7.1:31083287-31083306 MS.gene87798:CDS 30.0%
ACATCACAAACTAGTTATTC+TGG + chr7.1:31083504-31083523 MS.gene87798:CDS 30.0%
AGGTTAAGAAACAGGATATA+TGG + chr7.1:31082971-31082990 MS.gene87798:CDS 30.0%
CACTTCAAACCTTTATATTG+CGG + chr7.1:31083898-31083917 MS.gene87798:intron 30.0%
CTTTATATTGCGGTAAAATG+TGG + chr7.1:31083908-31083927 MS.gene87798:intron 30.0%
GAAAAATCTGTTTGCTTTGT+AGG - chr7.1:31083009-31083028 None:intergenic 30.0%
GAAATTGATATCCTTGATGA+TGG + chr7.1:31083759-31083778 MS.gene87798:CDS 30.0%
GGTTACAATTGGAGAAAATA+TGG + chr7.1:31083198-31083217 MS.gene87798:CDS 30.0%
TAGAACATTGTTGCATAGTT+TGG + chr7.1:31082856-31082875 MS.gene87798:intron 30.0%
TAGTTTATTGGACCGAAATA+TGG + chr7.1:31082826-31082845 MS.gene87798:intron 30.0%
TATGGTCAGAAAGTTGTTAA+AGG + chr7.1:31083798-31083817 MS.gene87798:CDS 30.0%
TTATATTGCGGCTGAAATTA+TGG + chr7.1:31083961-31083980 MS.gene87798:intron 30.0%
TTCTATTAGATTGAGGCTTA+GGG - chr7.1:31083362-31083381 None:intergenic 30.0%
! AAGGGTGATAATGAAAATGA+GGG + chr7.1:31083675-31083694 MS.gene87798:CDS 30.0%
! AGTCAATAAGTTCTAACTTG+GGG + chr7.1:31083866-31083885 MS.gene87798:intron 30.0%
! ATCTGAGTATTGTGAATGAT+TGG - chr7.1:31084434-31084453 None:intergenic 30.0%
! ATTTTTCTTTGTTGCAGGAA+GGG + chr7.1:31083657-31083676 MS.gene87798:intron 30.0%
! CACATTTTACCGCAATATAA+AGG - chr7.1:31083910-31083929 None:intergenic 30.0%
! TTGTGATTTTTCTTTGTTGC+AGG + chr7.1:31083652-31083671 MS.gene87798:intron 30.0%
!! AATTTTGGGTATTCATCTCT+CGG + chr7.1:31084388-31084407 MS.gene87798:CDS 30.0%
!! CCTCTAAAACTGTTATATTG+CGG + chr7.1:31083949-31083968 MS.gene87798:intron 30.0%
!! CTATGTATTTCTGGTTTGAT+TGG - chr7.1:31083096-31083115 None:intergenic 30.0%
!!! ATTTGTTTTGCTTGAACTTC+AGG + chr7.1:31082945-31082964 MS.gene87798:intron 30.0%
AAAGTCGAGAAGGATTTAGA+TGG + chr7.1:31083297-31083316 MS.gene87798:CDS 35.0%
AAATAACTCCTGATTTCCGT+TGG - chr7.1:31084341-31084360 None:intergenic 35.0%
AATGCAAGGTAATTAACTCG+TGG + chr7.1:31083828-31083847 MS.gene87798:intron 35.0%
AATTTCTGATCAATCAGCGA+TGG + chr7.1:31083422-31083441 MS.gene87798:CDS 35.0%
ACGAGTTAATTACCTTGCAT+TGG - chr7.1:31083829-31083848 None:intergenic 35.0%
AGCTGAAGAATCTTCTTGTA+TGG - chr7.1:31083457-31083476 None:intergenic 35.0%
AGTAATTCAGTTACTGGATC+TGG + chr7.1:31083114-31083133 MS.gene87798:CDS 35.0%
CGAGTTAATTACCTTGCATT+GGG - chr7.1:31083828-31083847 None:intergenic 35.0%
CTCAATCTGTTAGAGAACAA+AGG + chr7.1:31083163-31083182 MS.gene87798:CDS 35.0%
CTTCTATTAGATTGAGGCTT+AGG - chr7.1:31083363-31083382 None:intergenic 35.0%
GATCAGAAGATGGTTACAAT+TGG + chr7.1:31083187-31083206 MS.gene87798:CDS 35.0%
GTAGTTTGAACTACAACTCT+AGG - chr7.1:31083735-31083754 None:intergenic 35.0%
TAATTAACTCGTGGAAACGA+AGG + chr7.1:31083837-31083856 MS.gene87798:intron 35.0%
TATGGACAGAAACAAGTGAA+AGG + chr7.1:31083216-31083235 MS.gene87798:CDS 35.0%
TCACAAACTAGTTATTCTGG+AGG + chr7.1:31083507-31083526 MS.gene87798:CDS 35.0%
TGTTCAGAGAATTTCTGTTC+AGG - chr7.1:31084219-31084238 None:intergenic 35.0%
TTAAAGGAAATCCCAATGCA+AGG + chr7.1:31083814-31083833 MS.gene87798:CDS 35.0%
! AAATCAGGAGTTATTTCCAC+AGG + chr7.1:31084345-31084364 MS.gene87798:CDS 35.0%
! ATGTGGTTTGTATGACTTGT+GGG + chr7.1:31082539-31082558 MS.gene87798:intron 35.0%
! GAAGGGTGATAATGAAAATG+AGG + chr7.1:31083674-31083693 MS.gene87798:CDS 35.0%
! GATTTTTCTTTGTTGCAGGA+AGG + chr7.1:31083656-31083675 MS.gene87798:intron 35.0%
! TAAGTTCTAACTTGGGGTTA+TGG + chr7.1:31083872-31083891 MS.gene87798:intron 35.0%
!! AAACAGATTTTTCAACCGAG+AGG + chr7.1:31083016-31083035 MS.gene87798:CDS 35.0%
!! AAGAATAGCTCTGAGTTGAT+TGG - chr7.1:31083062-31083081 None:intergenic 35.0%
!! ATATCCTTGATGATGGCTTT+AGG + chr7.1:31083766-31083785 MS.gene87798:CDS 35.0%
!! ATTGGTGAAACTTGCTGAAT+TGG - chr7.1:31084290-31084309 None:intergenic 35.0%
!! CCGCAATATAACAGTTTTAG+AGG - chr7.1:31083952-31083971 None:intergenic 35.0%
AAGGTCTAATACGTCATTCG+TGG + chr7.1:31083584-31083603 MS.gene87798:intron 40.0%
ACTTCATCATGCACTAACTC+CGG + chr7.1:31083399-31083418 MS.gene87798:CDS 40.0%
AGAAGATTCTTCAGCTTCTG+TGG + chr7.1:31083461-31083480 MS.gene87798:CDS 40.0%
ATACAAACCACATGCCAATG+AGG - chr7.1:31082532-31082551 None:intergenic 40.0%
CGTTTGACAGAAATGACTGA+AGG - chr7.1:31084501-31084520 None:intergenic 40.0%
CTACTTAGTGGAATAAGGCT+CGG + chr7.1:31082894-31082913 MS.gene87798:intron 40.0%
CTTATTCCACTAAGTAGGGT+CGG - chr7.1:31082891-31082910 None:intergenic 40.0%
GAACAAAGGAGATCAGAAGA+TGG + chr7.1:31083177-31083196 MS.gene87798:CDS 40.0%
GAAGATTCTTCAGCTTCTGT+GGG + chr7.1:31083462-31083481 MS.gene87798:CDS 40.0%
GAGTTAGTGCATGATGAAGT+AGG - chr7.1:31083399-31083418 None:intergenic 40.0%
GTGCACTTGTAATAACTACG+CGG - chr7.1:31083252-31083271 None:intergenic 40.0%
TATTAGATTGAGGCTTAGGG+TGG - chr7.1:31083359-31083378 None:intergenic 40.0%
TCAGGAACAGGTTAAGAAAC+AGG + chr7.1:31082963-31082982 MS.gene87798:intron 40.0%
TTCATCTCTCGGAAGATCAA+TGG + chr7.1:31084399-31084418 MS.gene87798:CDS 40.0%
TTTAACAGTTCTACTAGCCG+AGG - chr7.1:31083709-31083728 None:intergenic 40.0%
TTTGCTTGAACTTCAGGAAC+AGG + chr7.1:31082951-31082970 MS.gene87798:intron 40.0%
! CATGTGGTTTGTATGACTTG+TGG + chr7.1:31082538-31082557 MS.gene87798:intron 40.0%
! CGCTGATTGATCAGAAATTC+CGG - chr7.1:31083421-31083440 None:intergenic 40.0%
! CTCAGATGCTGCTTACTTAA+AGG + chr7.1:31084447-31084466 MS.gene87798:CDS 40.0%
! GTTTTCTCACATTACAGCCA+GGG - chr7.1:31084096-31084115 None:intergenic 40.0%
! TGCAGGGTCATGGAAATTTT+GGG + chr7.1:31084374-31084393 MS.gene87798:CDS 40.0%
! TGTGGTTTGTATGACTTGTG+GGG + chr7.1:31082540-31082559 MS.gene87798:intron 40.0%
! TGTTTTCTCACATTACAGCC+AGG - chr7.1:31084097-31084116 None:intergenic 40.0%
! TTGCAGGGTCATGGAAATTT+TGG + chr7.1:31084373-31084392 MS.gene87798:CDS 40.0%
! TTTTCTCACATTACAGCCAG+GGG - chr7.1:31084095-31084114 None:intergenic 40.0%
!! AGATTTTTCAACCGAGAGGA+CGG + chr7.1:31083020-31083039 MS.gene87798:CDS 40.0%
!! GAGCCTTATTCCACTAAGTA+GGG - chr7.1:31082895-31082914 None:intergenic 40.0%
!! GGCTTTAGGTGGAGAAAATA+TGG + chr7.1:31083780-31083799 MS.gene87798:CDS 40.0%
AAATGAGGGCTATTGTGCCT+CGG + chr7.1:31083689-31083708 MS.gene87798:CDS 45.0%
ACTTAAAGGCCAAGGATGAG+CGG + chr7.1:31084461-31084480 MS.gene87798:CDS 45.0%
ATTTCCACAGGACATGTTGC+AGG + chr7.1:31084357-31084376 MS.gene87798:CDS 45.0%
CCCTTCGTAAGTTGTGATCA+CGG - chr7.1:31084149-31084168 None:intergenic 45.0%
CCGTGATCACAACTTACGAA+GGG + chr7.1:31084146-31084165 MS.gene87798:CDS 45.0%
CGACCCTACTTAGTGGAATA+AGG + chr7.1:31082889-31082908 MS.gene87798:intron 45.0%
GAATAACAGTTCACCGCTGA+GGG - chr7.1:31084268-31084287 None:intergenic 45.0%
GTTCTAACCTCATTGGCATG+TGG + chr7.1:31082522-31082541 MS.gene87798:intron 45.0%
TATTACAAATGCACTGCCCC+TGG + chr7.1:31084076-31084095 MS.gene87798:CDS 45.0%
TCCACCTAAAGCCATCATCA+AGG - chr7.1:31083773-31083792 None:intergenic 45.0%
TTGTACCAGAGGCGAAAAGA+TGG + chr7.1:31083544-31083563 MS.gene87798:CDS 45.0%
TTTCCACAGGACATGTTGCA+GGG + chr7.1:31084358-31084377 MS.gene87798:CDS 45.0%
! ATCTTTTCGCCTCTGGTACA+AGG - chr7.1:31083545-31083564 None:intergenic 45.0%
! TCTTACCATCTTTTCGCCTC+TGG - chr7.1:31083552-31083571 None:intergenic 45.0%
! TCTTTTCGCCTCTGGTACAA+GGG - chr7.1:31083544-31083563 None:intergenic 45.0%
! TGCTGCTTACTTAAAGGCCA+AGG + chr7.1:31084453-31084472 MS.gene87798:CDS 45.0%
!! AGATTTTGATGCCGTCCTCT+CGG - chr7.1:31083034-31083053 None:intergenic 45.0%
!! CGAGCCTTATTCCACTAAGT+AGG - chr7.1:31082896-31082915 None:intergenic 45.0%
!! TCCTTGATGATGGCTTTAGG+TGG + chr7.1:31083769-31083788 MS.gene87798:CDS 45.0%
!!! CGTCATTCGTGGTTTTAGAG+TGG + chr7.1:31083595-31083614 MS.gene87798:intron 45.0%
AACTCCTGATTTCCGTTGGC+AGG - chr7.1:31084337-31084356 None:intergenic 50.0%
AATACCGGACTTCCTGCCAA+CGG + chr7.1:31084322-31084341 MS.gene87798:CDS 50.0%
ACTTCCTGCCAACGGAAATC+AGG + chr7.1:31084330-31084349 MS.gene87798:CDS 50.0%
ATGTAGCCGACCCTACTTAG+TGG + chr7.1:31082882-31082901 MS.gene87798:intron 50.0%
ATTTCCGTTGGCAGGAAGTC+CGG - chr7.1:31084329-31084348 None:intergenic 50.0%
CTTAGTGGAATAAGGCTCGG+TGG + chr7.1:31082897-31082916 MS.gene87798:intron 50.0%
GCCGTGATCACAACTTACGA+AGG + chr7.1:31084145-31084164 MS.gene87798:CDS 50.0%
GGAATAACAGTTCACCGCTG+AGG - chr7.1:31084269-31084288 None:intergenic 50.0%
TTCTTCAGCTTCTGTGGGAG+AGG + chr7.1:31083467-31083486 MS.gene87798:CDS 50.0%
AAAGGCCAAGGATGAGCGGA+AGG + chr7.1:31084465-31084484 MS.gene87798:CDS 55.0%
CAGGACATGTTGCAGGGTCA+TGG + chr7.1:31084364-31084383 MS.gene87798:CDS 55.0%
GCAGCATACCAGCGCCTATT+AGG + chr7.1:31084242-31084261 MS.gene87798:CDS 55.0%
GTCATCCTTCCGCTCATCCT+TGG - chr7.1:31084473-31084492 None:intergenic 55.0%
TGACAACGCCCTTGTACCAG+AGG + chr7.1:31083533-31083552 MS.gene87798:CDS 55.0%
TGACCCTGCAACATGTCCTG+TGG - chr7.1:31084364-31084383 None:intergenic 55.0%
TTCACCGCTGAGGGCCTAAT+AGG - chr7.1:31084259-31084278 None:intergenic 55.0%
AGCGCCTATTAGGCCCTCAG+CGG + chr7.1:31084252-31084271 MS.gene87798:CDS 60.0%
CATGACGTACCAGCAGCACG+CGG + chr7.1:31084178-31084197 MS.gene87798:CDS 60.0%
GCTGAGGGCCTAATAGGCGC+TGG - chr7.1:31084253-31084272 None:intergenic 65.0%
! CGCGTGCTGCTGGTACGTCA+TGG - chr7.1:31084180-31084199 None:intergenic 65.0%
CCTGCAGCACCGCGTGCTGC+TGG - chr7.1:31084190-31084209 None:intergenic 75.0%
!! CCAGCAGCACGCGGTGCTGC+AGG + chr7.1:31084187-31084206 MS.gene87798:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 31082258 31084528 31082258 ID=MS.gene87798
chr7.1 mRNA 31082258 31084528 31082258 ID=MS.gene87798.t1;Parent=MS.gene87798
chr7.1 exon 31082258 31082269 31082258 ID=MS.gene87798.t1.exon1;Parent=MS.gene87798.t1
chr7.1 CDS 31082258 31082269 31082258 ID=cds.MS.gene87798.t1;Parent=MS.gene87798.t1
chr7.1 exon 31082967 31083565 31082967 ID=MS.gene87798.t1.exon2;Parent=MS.gene87798.t1
chr7.1 CDS 31082967 31083565 31082967 ID=cds.MS.gene87798.t1;Parent=MS.gene87798.t1
chr7.1 exon 31083674 31083835 31083674 ID=MS.gene87798.t1.exon3;Parent=MS.gene87798.t1
chr7.1 CDS 31083674 31083835 31083674 ID=cds.MS.gene87798.t1;Parent=MS.gene87798.t1
chr7.1 exon 31084072 31084528 31084072 ID=MS.gene87798.t1.exon4;Parent=MS.gene87798.t1
chr7.1 CDS 31084072 31084528 31084072 ID=cds.MS.gene87798.t1;Parent=MS.gene87798.t1
Gene Sequence

>MS.gene87798

ATGTTTCAACAGGTAAGCACTGTTTTTTTTCTTAAACAAGTATCATTTTGTGTGTTATCTAGGGCTTGTGTGAATTAATTTTGCTTTTTTCTGGAGTTTATGACATGTTCATAAGCTGTTTTCAGCTTATTTCTAAACATAACTTATAGCTTATGTGTAAAAGTTTGACTTTATTTTATCTTCTGTTATGAAATTAGCTTATACAAAAGCACTTATGTTATAAACACACTTAATTAAGCTGTTTATCCAAACATAGCTTTATTTGTTCTAACCTCATTGGCATGTGGTTTGTATGACTTGTGGGGTCTGTTTGTTTTTTGTTTACTGTTTTTGATGGAGTTTTTTATTTTCTGCTTATTTGTACTTTTCTTTTTGTTTTCTTTTTCTTGTTTTAGTATAAACAAGGTTTGTTGAATAGTTCAAACAAGGCTAAAAACTTTACTAGTATATTCTTAAGTCTTAGGTTGAAAATATTTCAATGTATGTTTCTATGCTTTGATAATCAATAGACTATATCATAATGATTATTATGTTGAATAGTCACAACAATTTAAAGTAAAACAAGGTTTAGTTTATTGGACCGAAATATGGTTTGTGATAGAACATTGTTGCATAGTTTGGTCTATGTAGCCGACCCTACTTAGTGGAATAAGGCTCGGTGGTTGTTGTATTCTAATTAAATTCAATATTTGTTTTGCTTGAACTTCAGGAACAGGTTAAGAAACAGGATATATGGAAATTTAATGAACCTACAAAGCAAACAGATTTTTCAACCGAGAGGACGGCATCAAAATCTGAATTCCAATCAACTCAGAGCTATTCTTCAGAAATTGTACCAATCAAACCAGAAATACATAGTAATTCAGTTACTGGATCTGGTTATTATAACTACAATAATAATGCATCTCAATCTGTTAGAGAACAAAGGAGATCAGAAGATGGTTACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGCGAAAATCCGCGTAGTTATTACAAGTGCACGAATCCAAATTGCTCAATGAAGAAAAAAGTCGAGAAGGATTTAGATGGACAAATTACTGAAATTGTGTATAAGGGAACTCATAACCACCCTAAGCCTCAATCTAATAGAAGAACAAACTCTCAACCTACTTCATCATGCACTAACTCCGGAATTTCTGATCAATCAGCGATGGATCATGTATCCATACAAGAAGATTCTTCAGCTTCTGTGGGAGAGGAAGATTTTGAACAAACATCACAAACTAGTTATTCTGGAGGAAATGACAACGCCCTTGTACCAGAGGCGAAAAGATGGTAAGATATAAACAATTTAAGGTCTAATACGTCATTCGTGGTTTTAGAGTGGAATTGTGTAGTGCATTTTAATTTAGTCGAACTAATTGTGATTTTTCTTTGTTGCAGGAAGGGTGATAATGAAAATGAGGGCTATTGTGCCTCGGCTAGTAGAACTGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATCCTTGATGATGGCTTTAGGTGGAGAAAATATGGTCAGAAAGTTGTTAAAGGAAATCCCAATGCAAGGTAATTAACTCGTGGAAACGAAGGCGCTTTAGTCAATAAGTTCTAACTTGGGGTTATGGTTACACTTCAAACCTTTATATTGCGGTAAAATGTGGTTGCTGCTGTTGCAGAAACCTCTAAAACTGTTATATTGCGGCTGAAATTATGGCTGCAGACTGCAATTTAGAATTACAAATACATTTCTAGTTGTTGCTATTACGAACACCTTAACTTATTAATTTTTTCAAAATCTGCAGGAGCTATTACAAATGCACTGCCCCTGGCTGTAATGTGAGAAAACATGTTGAAAGAGCTGCACATGATATCAAAGCCGTGATCACAACTTACGAAGGGAAACACAACCATGACGTACCAGCAGCACGCGGTGCTGCAGGTTACAACCTGAACAGAAATTCTCTGAACAACAGCAGCATACCAGCGCCTATTAGGCCCTCAGCGGTGAACTGTTATTCCAATTCAGCAAGTTTCACCAATTCACTTTATAATAATACCGGACTTCCTGCCAACGGAAATCAGGAGTTATTTCCACAGGACATGTTGCAGGGTCATGGAAATTTTGGGTATTCATCTCTCGGAAGATCAATGGATTCATCAGCCAATCATTCACAATACTCAGATGCTGCTTACTTAAAGGCCAAGGATGAGCGGAAGGATGACTCATTCCTTCAGTCATTTCTGTCAAACGACTTCTAA
Protein sequence

>MS.gene87798.t1

MFQQEQVKKQDIWKFNEPTKQTDFSTERTASKSEFQSTQSYSSEIVPIKPEIHSNSVTGSGYYNYNNNASQSVREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTNPNCSMKKKVEKDLDGQITEIVYKGTHNHPKPQSNRRTNSQPTSSCTNSGISDQSAMDHVSIQEDSSASVGEEDFEQTSQTSYSGGNDNALVPEAKRWKGDNENEGYCASASRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCNVRKHVERAAHDIKAVITTYEGKHNHDVPAARGAAGYNLNRNSLNNSSIPAPIRPSAVNCYSNSASFTNSLYNNTGLPANGNQELFPQDMLQGHGNFGYSSLGRSMDSSANHSQYSDAAYLKAKDERKDDSFLQSFLSNDF