Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88616.t1 | XP_003589787.2 | 97.9 | 326 | 7 | 0 | 1 | 326 | 144 | 469 | 3.80E-186 | 660.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88616.t1 | Q9LHE3 | 70.6 | 326 | 95 | 1 | 1 | 326 | 146 | 470 | 4.5e-140 | 498.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88616.t1 | G7ICI5 | 97.9 | 326 | 7 | 0 | 1 | 326 | 144 | 469 | 2.7e-186 | 660.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene88616 | 0.831313 | 1.79E-55 | -1.69E-46 |
| MS.gene050667 | MS.gene88616 | 0.820123 | 8.10E-53 | -1.69E-46 |
| MS.gene052169 | MS.gene88616 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene052367 | MS.gene88616 | 0.802659 | 5.05E-49 | -1.69E-46 |
| MS.gene054614 | MS.gene88616 | 0.801502 | 8.74E-49 | -1.69E-46 |
| MS.gene054662 | MS.gene88616 | 0.831395 | 1.71E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene88616 | 0.844248 | 8.50E-59 | -1.69E-46 |
| MS.gene055382 | MS.gene88616 | 0.815558 | 8.69E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene88616 | 0.819314 | 1.24E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene88616 | 0.838688 | 2.48E-57 | -1.69E-46 |
| MS.gene057367 | MS.gene88616 | 0.813897 | 2.03E-51 | -1.69E-46 |
| MS.gene057669 | MS.gene88616 | 0.826941 | 2.06E-54 | -1.69E-46 |
| MS.gene058853 | MS.gene88616 | 0.821654 | 3.60E-53 | -1.69E-46 |
| MS.gene06093 | MS.gene88616 | 0.803857 | 2.85E-49 | -1.69E-46 |
| MS.gene060985 | MS.gene88616 | 0.833456 | 5.28E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88616.t1 | MTR_1g039270 | 97.853 | 326 | 7 | 0 | 1 | 326 | 144 | 469 | 0.0 | 655 |
| MS.gene88616.t1 | MTR_1g115210 | 73.926 | 326 | 84 | 1 | 1 | 326 | 162 | 486 | 3.85e-172 | 487 |
| MS.gene88616.t1 | MTR_1g111350 | 51.227 | 326 | 154 | 3 | 1 | 326 | 147 | 467 | 7.84e-108 | 322 |
| MS.gene88616.t1 | MTR_7g117430 | 48.936 | 329 | 164 | 4 | 1 | 326 | 157 | 484 | 1.43e-97 | 296 |
| MS.gene88616.t1 | MTR_6g085010 | 46.789 | 327 | 166 | 5 | 1 | 326 | 172 | 491 | 5.71e-95 | 290 |
| MS.gene88616.t1 | MTR_3g097150 | 40.356 | 337 | 180 | 11 | 2 | 326 | 119 | 446 | 8.43e-76 | 239 |
| MS.gene88616.t1 | MTR_8g103880 | 37.383 | 321 | 195 | 4 | 1 | 319 | 132 | 448 | 1.51e-74 | 236 |
| MS.gene88616.t1 | MTR_4g007740 | 36.578 | 339 | 195 | 5 | 1 | 326 | 146 | 477 | 1.73e-67 | 219 |
| MS.gene88616.t1 | MTR_5g080890 | 36.471 | 340 | 190 | 11 | 2 | 326 | 103 | 431 | 4.43e-63 | 206 |
| MS.gene88616.t1 | MTR_5g080960 | 36.765 | 340 | 189 | 11 | 2 | 326 | 103 | 431 | 8.86e-63 | 206 |
| MS.gene88616.t1 | MTR_8g096990 | 36.283 | 339 | 190 | 13 | 2 | 326 | 103 | 429 | 1.55e-62 | 205 |
| MS.gene88616.t1 | MTR_5g044770 | 35.503 | 338 | 193 | 11 | 2 | 326 | 103 | 428 | 4.68e-61 | 201 |
| MS.gene88616.t1 | MTR_3g046300 | 34.181 | 354 | 197 | 7 | 1 | 326 | 113 | 458 | 4.60e-60 | 199 |
| MS.gene88616.t1 | MTR_3g053710 | 37.243 | 341 | 192 | 9 | 1 | 326 | 133 | 466 | 1.21e-58 | 196 |
| MS.gene88616.t1 | MTR_3g053980 | 39.286 | 336 | 186 | 9 | 1 | 326 | 158 | 485 | 2.38e-55 | 187 |
| MS.gene88616.t1 | MTR_8g038280 | 33.913 | 345 | 194 | 12 | 2 | 326 | 103 | 433 | 2.76e-54 | 183 |
| MS.gene88616.t1 | MTR_6g090290 | 34.402 | 343 | 196 | 10 | 2 | 326 | 103 | 434 | 2.85e-52 | 178 |
| MS.gene88616.t1 | MTR_2g105300 | 31.832 | 333 | 203 | 14 | 6 | 323 | 56 | 379 | 1.12e-51 | 175 |
| MS.gene88616.t1 | MTR_5g091130 | 33.333 | 348 | 209 | 7 | 1 | 326 | 207 | 553 | 3.92e-51 | 177 |
| MS.gene88616.t1 | MTR_2g067830 | 31.858 | 339 | 207 | 14 | 3 | 326 | 75 | 404 | 4.07e-50 | 172 |
| MS.gene88616.t1 | MTR_2g028190 | 33.236 | 343 | 203 | 12 | 1 | 326 | 118 | 451 | 4.59e-50 | 172 |
| MS.gene88616.t1 | MTR_2g059460 | 32.941 | 340 | 198 | 11 | 4 | 326 | 78 | 404 | 1.88e-49 | 170 |
| MS.gene88616.t1 | MTR_4g109760 | 35.072 | 345 | 187 | 13 | 1 | 326 | 70 | 396 | 2.17e-49 | 169 |
| MS.gene88616.t1 | MTR_3g028120 | 31.657 | 338 | 211 | 10 | 2 | 326 | 106 | 436 | 1.60e-47 | 166 |
| MS.gene88616.t1 | MTR_6g088760 | 32.362 | 309 | 181 | 12 | 3 | 293 | 106 | 404 | 5.28e-47 | 166 |
| MS.gene88616.t1 | MTR_2g059490 | 32.743 | 339 | 207 | 13 | 3 | 326 | 76 | 408 | 5.89e-47 | 164 |
| MS.gene88616.t1 | MTR_8g038250 | 33.430 | 344 | 177 | 16 | 2 | 326 | 103 | 413 | 6.43e-47 | 164 |
| MS.gene88616.t1 | MTR_8g038310 | 33.033 | 333 | 188 | 12 | 3 | 326 | 105 | 411 | 4.12e-46 | 161 |
| MS.gene88616.t1 | MTR_5g008110 | 32.448 | 339 | 206 | 11 | 2 | 326 | 84 | 413 | 2.69e-45 | 159 |
| MS.gene88616.t1 | MTR_5g008150 | 31.977 | 344 | 200 | 12 | 3 | 326 | 81 | 410 | 5.44e-45 | 158 |
| MS.gene88616.t1 | MTR_0036s0070 | 31.548 | 336 | 201 | 12 | 2 | 326 | 107 | 424 | 8.17e-44 | 155 |
| MS.gene88616.t1 | MTR_5g038360 | 30.882 | 340 | 210 | 14 | 2 | 326 | 105 | 434 | 9.45e-44 | 155 |
| MS.gene88616.t1 | MTR_0036s0110 | 30.548 | 347 | 202 | 14 | 2 | 326 | 111 | 440 | 9.82e-44 | 155 |
| MS.gene88616.t1 | MTR_2g055840 | 31.339 | 351 | 210 | 12 | 1 | 326 | 29 | 373 | 1.83e-42 | 150 |
| MS.gene88616.t1 | MTR_5g008070 | 33.333 | 339 | 200 | 12 | 2 | 326 | 98 | 424 | 8.59e-41 | 147 |
| MS.gene88616.t1 | MTR_0036s0050 | 30.233 | 344 | 204 | 12 | 2 | 326 | 107 | 433 | 1.13e-40 | 147 |
| MS.gene88616.t1 | MTR_0024s0040 | 29.290 | 338 | 215 | 11 | 3 | 326 | 81 | 408 | 3.12e-39 | 143 |
| MS.gene88616.t1 | MTR_1g037630 | 33.036 | 336 | 200 | 9 | 1 | 326 | 108 | 428 | 5.64e-39 | 142 |
| MS.gene88616.t1 | MTR_3g014290 | 33.036 | 336 | 200 | 9 | 1 | 326 | 96 | 416 | 9.66e-39 | 142 |
| MS.gene88616.t1 | MTR_4g045857 | 38.384 | 198 | 110 | 6 | 4 | 189 | 77 | 274 | 3.22e-37 | 135 |
| MS.gene88616.t1 | MTR_5g044570 | 28.829 | 333 | 200 | 11 | 2 | 326 | 106 | 409 | 3.22e-37 | 137 |
| MS.gene88616.t1 | MTR_3g100500 | 33.136 | 338 | 201 | 13 | 1 | 326 | 113 | 437 | 5.18e-37 | 137 |
| MS.gene88616.t1 | MTR_8g039540 | 33.333 | 333 | 204 | 9 | 1 | 326 | 112 | 433 | 3.41e-36 | 135 |
| MS.gene88616.t1 | MTR_2g070430 | 29.363 | 361 | 206 | 12 | 1 | 324 | 103 | 451 | 3.01e-33 | 127 |
| MS.gene88616.t1 | MTR_1g060750 | 28.994 | 338 | 200 | 14 | 10 | 326 | 56 | 374 | 7.74e-33 | 125 |
| MS.gene88616.t1 | MTR_3g068000 | 28.883 | 367 | 206 | 16 | 1 | 326 | 89 | 441 | 2.59e-28 | 114 |
| MS.gene88616.t1 | MTR_5g008090 | 29.836 | 305 | 184 | 12 | 40 | 326 | 20 | 312 | 5.95e-28 | 110 |
| MS.gene88616.t1 | MTR_4g100990 | 27.157 | 394 | 206 | 18 | 1 | 326 | 90 | 470 | 7.10e-27 | 110 |
| MS.gene88616.t1 | MTR_7g105850 | 28.418 | 373 | 207 | 15 | 1 | 326 | 106 | 465 | 3.85e-26 | 108 |
| MS.gene88616.t1 | MTR_7g102750 | 26.000 | 350 | 225 | 12 | 3 | 326 | 99 | 440 | 4.59e-26 | 108 |
| MS.gene88616.t1 | MTR_7g102750 | 26.769 | 325 | 204 | 12 | 3 | 301 | 99 | 415 | 1.43e-25 | 106 |
| MS.gene88616.t1 | MTR_5g012490 | 25.840 | 387 | 218 | 16 | 1 | 326 | 91 | 469 | 5.80e-25 | 105 |
| MS.gene88616.t1 | MTR_5g016260 | 25.145 | 346 | 221 | 14 | 1 | 326 | 104 | 431 | 1.13e-24 | 104 |
| MS.gene88616.t1 | MTR_5g016260 | 25.145 | 346 | 221 | 14 | 1 | 326 | 104 | 431 | 2.01e-24 | 104 |
| MS.gene88616.t1 | MTR_4g095270 | 24.277 | 346 | 224 | 13 | 1 | 326 | 96 | 423 | 2.48e-24 | 103 |
| MS.gene88616.t1 | MTR_2g084550 | 28.443 | 334 | 192 | 17 | 3 | 303 | 95 | 414 | 2.70e-24 | 103 |
| MS.gene88616.t1 | MTR_4g095270 | 24.277 | 346 | 224 | 13 | 1 | 326 | 96 | 423 | 4.34e-24 | 103 |
| MS.gene88616.t1 | MTR_7g062360 | 27.978 | 361 | 215 | 17 | 1 | 326 | 75 | 425 | 2.98e-23 | 99.8 |
| MS.gene88616.t1 | MTR_4g056420 | 28.743 | 334 | 190 | 18 | 3 | 303 | 95 | 413 | 8.64e-23 | 99.0 |
| MS.gene88616.t1 | MTR_8g094590 | 25.779 | 353 | 214 | 15 | 3 | 326 | 91 | 424 | 9.47e-23 | 98.2 |
| MS.gene88616.t1 | MTR_2g063110 | 27.829 | 327 | 214 | 12 | 19 | 326 | 185 | 508 | 1.08e-22 | 98.6 |
| MS.gene88616.t1 | MTR_3g065160 | 26.479 | 355 | 214 | 15 | 1 | 326 | 90 | 426 | 1.79e-22 | 97.4 |
| MS.gene88616.t1 | MTR_1g061940 | 26.586 | 331 | 203 | 12 | 3 | 303 | 101 | 421 | 2.70e-21 | 94.7 |
| MS.gene88616.t1 | MTR_1g078240 | 25.140 | 358 | 220 | 15 | 3 | 326 | 87 | 430 | 1.24e-19 | 89.7 |
| MS.gene88616.t1 | MTR_5g077850 | 25.356 | 351 | 227 | 13 | 1 | 326 | 97 | 437 | 2.29e-19 | 88.6 |
| MS.gene88616.t1 | MTR_8g094590 | 25.786 | 318 | 192 | 14 | 3 | 295 | 91 | 389 | 3.36e-19 | 87.8 |
| MS.gene88616.t1 | MTR_8g094590 | 29.185 | 233 | 134 | 10 | 3 | 222 | 91 | 305 | 9.62e-19 | 85.5 |
| MS.gene88616.t1 | MTR_1g078240 | 26.733 | 303 | 180 | 14 | 3 | 277 | 87 | 375 | 1.10e-18 | 86.3 |
| MS.gene88616.t1 | MTR_1g078240 | 25.140 | 358 | 219 | 16 | 3 | 326 | 87 | 429 | 1.64e-18 | 86.3 |
| MS.gene88616.t1 | MTR_7g021510 | 23.546 | 361 | 226 | 14 | 1 | 326 | 88 | 433 | 2.98e-18 | 85.5 |
| MS.gene88616.t1 | MTR_3g096930 | 25.352 | 355 | 212 | 17 | 3 | 326 | 102 | 434 | 6.03e-17 | 81.6 |
| MS.gene88616.t1 | MTR_5g061690 | 27.171 | 357 | 205 | 18 | 1 | 326 | 117 | 449 | 2.69e-15 | 77.0 |
| MS.gene88616.t1 | MTR_5g077920 | 24.919 | 309 | 204 | 11 | 1 | 288 | 84 | 385 | 9.00e-15 | 75.1 |
| MS.gene88616.t1 | MTR_2g022450 | 24.397 | 373 | 220 | 18 | 1 | 325 | 56 | 414 | 5.95e-14 | 72.4 |
| MS.gene88616.t1 | MTR_3g087780 | 24.011 | 354 | 223 | 13 | 1 | 326 | 115 | 450 | 1.05e-13 | 72.0 |
| MS.gene88616.t1 | MTR_3g006820 | 22.817 | 355 | 224 | 13 | 3 | 326 | 77 | 412 | 1.40e-13 | 71.2 |
| MS.gene88616.t1 | MTR_6g084710 | 24.513 | 359 | 219 | 17 | 3 | 326 | 209 | 550 | 2.75e-13 | 70.9 |
| MS.gene88616.t1 | MTR_4g023650 | 32.086 | 187 | 95 | 10 | 3 | 165 | 79 | 257 | 3.13e-13 | 70.5 |
| MS.gene88616.t1 | MTR_6g084710 | 25.641 | 234 | 143 | 10 | 3 | 219 | 209 | 428 | 5.39e-13 | 69.7 |
| MS.gene88616.t1 | MTR_1g029810 | 25.215 | 349 | 212 | 16 | 3 | 321 | 75 | 404 | 1.70e-12 | 68.2 |
| MS.gene88616.t1 | MTR_1g029810 | 25.071 | 351 | 214 | 16 | 1 | 321 | 73 | 404 | 2.19e-12 | 67.8 |
| MS.gene88616.t1 | MTR_4g023630 | 28.415 | 183 | 104 | 8 | 3 | 164 | 79 | 255 | 4.45e-12 | 67.0 |
| MS.gene88616.t1 | MTR_5g061690 | 26.214 | 309 | 184 | 14 | 39 | 326 | 25 | 310 | 1.31e-11 | 65.5 |
| MS.gene88616.t1 | MTR_5g080330 | 23.631 | 347 | 219 | 16 | 1 | 326 | 1 | 322 | 4.37e-11 | 63.9 |
| MS.gene88616.t1 | MTR_4g008110 | 43.750 | 80 | 39 | 2 | 57 | 130 | 45 | 124 | 7.46e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88616.t1 | AT3G20015 | 70.552 | 326 | 95 | 1 | 1 | 326 | 146 | 470 | 2.28e-157 | 449 |
| MS.gene88616.t1 | AT3G18490 | 50.305 | 328 | 157 | 4 | 1 | 326 | 177 | 500 | 5.50e-107 | 321 |
| MS.gene88616.t1 | AT1G25510 | 47.853 | 326 | 165 | 3 | 1 | 326 | 163 | 483 | 3.70e-103 | 311 |
| MS.gene88616.t1 | AT3G61820 | 48.955 | 335 | 161 | 4 | 1 | 326 | 150 | 483 | 1.73e-99 | 301 |
| MS.gene88616.t1 | AT1G01300 | 50.606 | 330 | 157 | 5 | 1 | 326 | 157 | 484 | 1.26e-98 | 300 |
| MS.gene88616.t1 | AT5G10770 | 39.521 | 334 | 187 | 7 | 1 | 326 | 147 | 473 | 4.60e-71 | 228 |
| MS.gene88616.t1 | AT2G03200 | 37.135 | 342 | 192 | 12 | 2 | 326 | 123 | 458 | 4.43e-63 | 207 |
| MS.gene88616.t1 | AT1G79720 | 36.391 | 338 | 190 | 6 | 1 | 321 | 148 | 477 | 2.40e-60 | 201 |
| MS.gene88616.t1 | AT5G10760 | 37.690 | 329 | 191 | 7 | 1 | 326 | 147 | 464 | 1.27e-57 | 193 |
| MS.gene88616.t1 | AT5G33340 | 34.421 | 337 | 201 | 9 | 2 | 326 | 106 | 434 | 7.87e-57 | 190 |
| MS.gene88616.t1 | AT1G64830 | 34.412 | 340 | 195 | 13 | 2 | 326 | 102 | 428 | 1.01e-49 | 171 |
| MS.gene88616.t1 | AT3G59080 | 32.286 | 350 | 211 | 9 | 1 | 326 | 185 | 532 | 1.17e-49 | 173 |
| MS.gene88616.t1 | AT2G28040 | 33.533 | 334 | 189 | 10 | 2 | 326 | 72 | 381 | 3.19e-49 | 169 |
| MS.gene88616.t1 | AT2G28040 | 33.533 | 334 | 189 | 10 | 2 | 326 | 81 | 390 | 3.95e-49 | 169 |
| MS.gene88616.t1 | AT2G42980 | 32.670 | 352 | 209 | 10 | 1 | 326 | 175 | 524 | 9.04e-49 | 171 |
| MS.gene88616.t1 | AT3G25700 | 31.818 | 352 | 213 | 11 | 1 | 326 | 99 | 449 | 1.35e-47 | 166 |
| MS.gene88616.t1 | AT3G54400 | 33.533 | 334 | 202 | 10 | 1 | 326 | 103 | 424 | 2.24e-46 | 162 |
| MS.gene88616.t1 | AT2G28010 | 31.737 | 334 | 196 | 8 | 2 | 326 | 81 | 391 | 4.61e-46 | 161 |
| MS.gene88616.t1 | AT2G28030 | 32.143 | 336 | 190 | 10 | 3 | 326 | 78 | 387 | 4.80e-46 | 160 |
| MS.gene88616.t1 | AT1G09750 | 31.548 | 336 | 214 | 9 | 1 | 326 | 119 | 448 | 1.60e-45 | 160 |
| MS.gene88616.t1 | AT2G28220 | 31.176 | 340 | 192 | 10 | 3 | 326 | 84 | 397 | 1.55e-42 | 152 |
| MS.gene88616.t1 | AT3G59080 | 31.014 | 345 | 186 | 9 | 1 | 326 | 185 | 496 | 1.37e-40 | 148 |
| MS.gene88616.t1 | AT2G28225 | 30.702 | 342 | 191 | 12 | 3 | 326 | 84 | 397 | 1.73e-37 | 138 |
| MS.gene88616.t1 | AT1G31450 | 30.000 | 350 | 211 | 14 | 2 | 326 | 101 | 441 | 1.68e-36 | 136 |
| MS.gene88616.t1 | AT5G07030 | 33.138 | 341 | 197 | 11 | 1 | 326 | 130 | 454 | 1.11e-35 | 134 |
| MS.gene88616.t1 | AT2G35615 | 28.409 | 352 | 216 | 14 | 2 | 326 | 101 | 443 | 1.39e-35 | 134 |
| MS.gene88616.t1 | AT4G30040 | 29.499 | 339 | 210 | 9 | 1 | 321 | 100 | 427 | 2.19e-34 | 130 |
| MS.gene88616.t1 | AT2G23945 | 30.990 | 313 | 180 | 14 | 2 | 293 | 112 | 409 | 7.30e-33 | 127 |
| MS.gene88616.t1 | AT5G43100 | 26.957 | 345 | 215 | 13 | 1 | 326 | 91 | 417 | 8.85e-30 | 118 |
| MS.gene88616.t1 | AT4G30030 | 30.347 | 346 | 202 | 15 | 1 | 326 | 93 | 419 | 1.36e-29 | 117 |
| MS.gene88616.t1 | AT2G39710 | 28.767 | 365 | 205 | 16 | 1 | 325 | 80 | 429 | 2.02e-29 | 117 |
| MS.gene88616.t1 | AT5G43100 | 26.957 | 345 | 215 | 13 | 1 | 326 | 91 | 417 | 2.75e-29 | 118 |
| MS.gene88616.t1 | AT2G36670 | 27.660 | 329 | 199 | 13 | 3 | 303 | 51 | 368 | 4.39e-29 | 116 |
| MS.gene88616.t1 | AT2G36670 | 27.660 | 329 | 199 | 13 | 3 | 303 | 51 | 368 | 4.39e-29 | 116 |
| MS.gene88616.t1 | AT2G36670 | 27.660 | 329 | 199 | 13 | 3 | 303 | 117 | 434 | 5.88e-29 | 116 |
| MS.gene88616.t1 | AT2G36670 | 27.660 | 329 | 199 | 13 | 3 | 303 | 122 | 439 | 6.22e-29 | 116 |
| MS.gene88616.t1 | AT3G02740 | 27.507 | 349 | 217 | 15 | 3 | 326 | 27 | 364 | 7.58e-27 | 109 |
| MS.gene88616.t1 | AT3G02740 | 27.195 | 353 | 213 | 15 | 3 | 326 | 102 | 439 | 1.87e-26 | 109 |
| MS.gene88616.t1 | AT3G50050 | 27.378 | 347 | 213 | 13 | 1 | 326 | 108 | 436 | 3.66e-26 | 109 |
| MS.gene88616.t1 | AT3G12700 | 27.536 | 345 | 226 | 13 | 1 | 326 | 121 | 460 | 1.09e-25 | 107 |
| MS.gene88616.t1 | AT5G02190 | 27.913 | 369 | 209 | 18 | 1 | 326 | 88 | 442 | 1.20e-24 | 103 |
| MS.gene88616.t1 | AT5G37540 | 27.557 | 352 | 221 | 12 | 1 | 326 | 95 | 438 | 1.94e-24 | 103 |
| MS.gene88616.t1 | AT1G66180 | 27.920 | 351 | 217 | 13 | 1 | 326 | 87 | 426 | 2.22e-24 | 103 |
| MS.gene88616.t1 | AT5G36260 | 24.571 | 350 | 227 | 13 | 3 | 326 | 95 | 433 | 1.76e-23 | 100 |
| MS.gene88616.t1 | AT5G22850 | 28.399 | 331 | 196 | 14 | 3 | 303 | 98 | 417 | 2.55e-23 | 100 |
| MS.gene88616.t1 | AT3G52500 | 27.688 | 372 | 214 | 14 | 1 | 326 | 105 | 467 | 6.99e-23 | 99.0 |
| MS.gene88616.t1 | AT1G05840 | 26.124 | 356 | 217 | 15 | 3 | 326 | 97 | 438 | 5.19e-22 | 96.7 |
| MS.gene88616.t1 | AT1G65240 | 25.348 | 359 | 210 | 17 | 3 | 326 | 91 | 426 | 2.15e-21 | 94.7 |
| MS.gene88616.t1 | AT1G08210 | 27.841 | 352 | 214 | 16 | 3 | 326 | 135 | 474 | 2.34e-20 | 92.0 |
| MS.gene88616.t1 | AT1G08210 | 27.841 | 352 | 214 | 16 | 3 | 326 | 101 | 440 | 2.86e-20 | 91.7 |
| MS.gene88616.t1 | AT1G08210 | 27.841 | 352 | 214 | 16 | 3 | 326 | 149 | 488 | 3.74e-20 | 91.3 |
| MS.gene88616.t1 | AT1G08210 | 29.333 | 300 | 175 | 14 | 3 | 277 | 101 | 388 | 9.64e-20 | 90.1 |
| MS.gene88616.t1 | AT4G16563 | 28.141 | 398 | 206 | 16 | 3 | 326 | 100 | 491 | 1.01e-19 | 90.1 |
| MS.gene88616.t1 | AT5G45120 | 22.798 | 386 | 229 | 14 | 3 | 326 | 100 | 478 | 1.47e-19 | 89.4 |
| MS.gene88616.t1 | AT4G12920 | 27.761 | 335 | 187 | 11 | 1 | 313 | 73 | 374 | 1.61e-19 | 88.6 |
| MS.gene88616.t1 | AT1G49050 | 26.087 | 253 | 155 | 12 | 3 | 236 | 222 | 461 | 2.47e-16 | 79.7 |
| MS.gene88616.t1 | AT2G17760 | 24.719 | 356 | 213 | 17 | 1 | 326 | 119 | 449 | 3.52e-16 | 79.7 |
| MS.gene88616.t1 | AT1G49050 | 26.360 | 239 | 144 | 12 | 3 | 222 | 222 | 447 | 9.53e-16 | 78.2 |
| MS.gene88616.t1 | AT1G49050 | 26.360 | 239 | 144 | 12 | 3 | 222 | 49 | 274 | 1.28e-15 | 77.4 |
| MS.gene88616.t1 | AT1G77480 | 25.905 | 359 | 212 | 19 | 1 | 326 | 82 | 419 | 1.83e-15 | 77.4 |
| MS.gene88616.t1 | AT1G77480 | 26.050 | 357 | 210 | 19 | 3 | 326 | 84 | 419 | 2.56e-15 | 76.6 |
| MS.gene88616.t1 | AT4G35880 | 24.702 | 336 | 211 | 14 | 1 | 313 | 122 | 438 | 1.04e-14 | 75.1 |
| MS.gene88616.t1 | AT3G51340 | 26.136 | 352 | 212 | 18 | 1 | 326 | 118 | 447 | 4.91e-14 | 73.2 |
| MS.gene88616.t1 | AT3G51350 | 24.713 | 348 | 205 | 16 | 1 | 321 | 117 | 434 | 8.94e-14 | 72.4 |
| MS.gene88616.t1 | AT4G35880 | 24.383 | 324 | 203 | 13 | 1 | 301 | 122 | 426 | 1.08e-13 | 72.0 |
| MS.gene88616.t1 | AT1G44130 | 24.294 | 354 | 218 | 17 | 3 | 326 | 66 | 399 | 1.53e-12 | 68.2 |
| MS.gene88616.t1 | AT3G51340 | 26.073 | 303 | 180 | 15 | 1 | 280 | 118 | 399 | 1.04e-11 | 65.9 |
| MS.gene88616.t1 | AT5G10080 | 23.691 | 363 | 216 | 16 | 1 | 326 | 115 | 453 | 3.12e-11 | 64.7 |
| MS.gene88616.t1 | AT3G51330 | 25.284 | 352 | 222 | 17 | 1 | 326 | 117 | 453 | 3.68e-11 | 64.3 |
| MS.gene88616.t1 | AT3G51330 | 25.284 | 352 | 222 | 17 | 1 | 326 | 117 | 453 | 3.78e-11 | 64.3 |
Find 108 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAATATTTGTTCGGATA+TGG | 0.122611 | 1.4:+23889910 | None:intergenic |
| GCTACTTCTGCTTCGTTTAT+TGG | 0.138095 | 1.4:-23891339 | MS.gene88616:CDS |
| TTCTACTACGTCTCACTTTC+GGG | 0.179528 | 1.4:-23889959 | MS.gene88616:CDS |
| CTACTTCTGCTTCGTTTATT+GGG | 0.181833 | 1.4:-23891338 | MS.gene88616:CDS |
| GCATTTGCTCCTTCACCTTC+TGG | 0.202156 | 1.4:-23889605 | MS.gene88616:CDS |
| GATATCCACACCTCCCTTTC+CGG | 0.230477 | 1.4:+23891265 | None:intergenic |
| CCTTCTGGTCTTTCCATCAT+AGG | 0.241850 | 1.4:-23889590 | MS.gene88616:CDS |
| ATCCAAAGGCTCCGCCGGTT+TGG | 0.265743 | 1.4:+23890095 | None:intergenic |
| CTTCTACTACGTCTCACTTT+CGG | 0.273039 | 1.4:-23889960 | MS.gene88616:CDS |
| TTGATCCCGGCCGATGATAT+TGG | 0.281436 | 1.4:-23889641 | MS.gene88616:CDS |
| TCCAAAGGCTCCGCCGGTTT+GGG | 0.283928 | 1.4:+23890096 | None:intergenic |
| ATTCAGGAAGTGATATTGTT+TGG | 0.328169 | 1.4:-23891419 | MS.gene88616:CDS |
| GCCCAAACCGGCGGAGCCTT+TGG | 0.328588 | 1.4:-23890097 | MS.gene88616:CDS |
| GTTTCTATCGATGGAACTAA+TGG | 0.337355 | 1.4:-23889542 | MS.gene88616:CDS |
| AACGGTCCGCCCGATGGTTA+TGG | 0.339939 | 1.4:+23890231 | None:intergenic |
| TATGTCTTTCGTGGGCCAAT+TGG | 0.346916 | 1.4:-23890122 | MS.gene88616:CDS |
| GTTGGAGCAGCTGGGTTGTT+AGG | 0.347858 | 1.4:-23890160 | MS.gene88616:CDS |
| GGAATGTTTGTTGGAGCAGC+TGG | 0.350251 | 1.4:-23890169 | MS.gene88616:CDS |
| CGCCGGTTTGGGCTCCCAAT+TGG | 0.356798 | 1.4:+23890107 | None:intergenic |
| TGAAATATTTGTTCGGATAT+GGG | 0.367001 | 1.4:+23889911 | None:intergenic |
| ATGTCTTTCGTGGGCCAATT+GGG | 0.379833 | 1.4:-23890121 | MS.gene88616:CDS |
| CAGTATATGGTGATAGATTC+AGG | 0.394103 | 1.4:-23891435 | None:intergenic |
| TGGAACAAGGGAATGTTTGT+TGG | 0.417853 | 1.4:-23890178 | MS.gene88616:CDS |
| ATATTTCAGTTAACTGATAT+AGG | 0.421183 | 1.4:-23889896 | MS.gene88616:CDS |
| TCACTTTCGGGTCTTGCAGT+TGG | 0.424557 | 1.4:-23889947 | MS.gene88616:CDS |
| CTTTCGGGTCTTGCAGTTGG+AGG | 0.428746 | 1.4:-23889944 | MS.gene88616:CDS |
| TCATCCGGTTCACTCGAATT+CGG | 0.429351 | 1.4:-23890046 | MS.gene88616:CDS |
| CAGTTAACTGATATAGGAAC+GGG | 0.432458 | 1.4:-23889890 | MS.gene88616:CDS |
| TTGCTGAATATTCCCTATGA+TGG | 0.435218 | 1.4:+23889577 | None:intergenic |
| TTGATGATGATGTTGCTTGC+CGG | 0.437671 | 1.4:-23891284 | MS.gene88616:CDS |
| GCAGCTGGGTTGTTAGGCCT+CGG | 0.440728 | 1.4:-23890154 | MS.gene88616:CDS |
| TTGCACCTACGGGCATTGCT+TGG | 0.450316 | 1.4:+23890020 | None:intergenic |
| TGCATCGCGAAAAGCATTGT+AGG | 0.452930 | 1.4:+23889817 | None:intergenic |
| CTGCAATCGGGTGCGGACAT+TGG | 0.452938 | 1.4:-23890198 | MS.gene88616:CDS |
| TGTCTTATCTCTCGAGGCAC+TGG | 0.460971 | 1.4:-23890070 | MS.gene88616:CDS |
| GGCCAATTGGGAGCCCAAAC+CGG | 0.466739 | 1.4:-23890109 | MS.gene88616:CDS |
| AGTTAACTGAAATATTTGTT+CGG | 0.472372 | 1.4:+23889904 | None:intergenic |
| TTCTGCTTCGTTTATTGGGG+TGG | 0.480733 | 1.4:-23891334 | MS.gene88616:CDS |
| GGAATTCAAGTTTCTATCGA+TGG | 0.482938 | 1.4:-23889551 | MS.gene88616:CDS |
| CTTCTGGTCTTTCCATCATA+GGG | 0.484726 | 1.4:-23889589 | MS.gene88616:CDS |
| AAATCTTAACCTTTCCCGCC+AGG | 0.484884 | 1.4:-23889670 | MS.gene88616:CDS |
| TGTTTGCTTCAACACACATT+GGG | 0.485439 | 1.4:+23889503 | None:intergenic |
| GATTGCAGTGTCCTTGATAA+CGG | 0.491062 | 1.4:+23890213 | None:intergenic |
| AGTGAGACGTAGTAGAAGCT+AGG | 0.502354 | 1.4:+23889965 | None:intergenic |
| GTTATCAAGGACACTGCAAT+CGG | 0.503421 | 1.4:-23890211 | MS.gene88616:CDS |
| AGTAGAAGCTAGGGTAGAAC+GGG | 0.505044 | 1.4:+23889975 | None:intergenic |
| GGGTTGTTAGGCCTCGGAGG+TGG | 0.505394 | 1.4:-23890148 | MS.gene88616:CDS |
| GCGTCCGAATTCGAGTGAAC+CGG | 0.505443 | 1.4:+23890042 | None:intergenic |
| GTGAGACGTAGTAGAAGCTA+GGG | 0.505740 | 1.4:+23889966 | None:intergenic |
| AGGTGGACCTATGTCTTTCG+TGG | 0.506441 | 1.4:-23890131 | MS.gene88616:CDS |
| ATAAACGAAGCAGAAGTAGC+AGG | 0.508250 | 1.4:+23891342 | None:intergenic |
| TCTCGAGGCACTGGATCATC+CGG | 0.510100 | 1.4:-23890061 | MS.gene88616:CDS |
| CTCTTGAAACCATAACCATC+GGG | 0.512781 | 1.4:-23890240 | MS.gene88616:CDS |
| CATCGGGCGGACCGTTATCA+AGG | 0.514418 | 1.4:-23890224 | MS.gene88616:CDS |
| AGGAACCCACATTGCACCTA+CGG | 0.516231 | 1.4:+23890009 | None:intergenic |
| CTTGATAACGGTCCGCCCGA+TGG | 0.523145 | 1.4:+23890225 | None:intergenic |
| ATGATGTTGCTTGCCGGAAA+GGG | 0.527421 | 1.4:-23891278 | MS.gene88616:CDS |
| AAAGTTCCAATATCATCGGC+CGG | 0.527527 | 1.4:+23889635 | None:intergenic |
| AACAGTAGGTAACCTGGTAA+TGG | 0.534799 | 1.4:+23889841 | None:intergenic |
| ACAGTATCCAAAGGCTCCGC+CGG | 0.535096 | 1.4:+23890090 | None:intergenic |
| TACTTCTGCTTCGTTTATTG+GGG | 0.538816 | 1.4:-23891337 | MS.gene88616:CDS |
| GGAACCCACATTGCACCTAC+GGG | 0.543677 | 1.4:+23890010 | None:intergenic |
| GCTCTTGAAACCATAACCAT+CGG | 0.557569 | 1.4:-23890241 | MS.gene88616:CDS |
| GACACGTGTTATGACTTGAA+CGG | 0.559620 | 1.4:-23889743 | MS.gene88616:CDS |
| GAAATATTTGTTCGGATATG+GGG | 0.560097 | 1.4:+23889912 | None:intergenic |
| AATTGGCCCACGAAAGACAT+AGG | 0.560178 | 1.4:+23890124 | None:intergenic |
| TGTGGATATCAAGTTGCATA+TGG | 0.560299 | 1.4:-23891252 | MS.gene88616:CDS |
| CGGGTGCGGACATTGGAACA+AGG | 0.561496 | 1.4:-23890191 | MS.gene88616:CDS |
| ACACCGGCACAGCCATTACC+AGG | 0.562171 | 1.4:-23889853 | MS.gene88616:CDS |
| GATGATGTTGCTTGCCGGAA+AGG | 0.565770 | 1.4:-23891279 | MS.gene88616:CDS |
| TAGTAGAAGCTAGGGTAGAA+CGG | 0.569534 | 1.4:+23889974 | None:intergenic |
| ATGTTTGCTTCAACACACAT+TGG | 0.570489 | 1.4:+23889502 | None:intergenic |
| ATCAAGTTGCATATGGTGAT+GGG | 0.575723 | 1.4:-23891245 | MS.gene88616:CDS |
| AAGTTCCAATATCATCGGCC+GGG | 0.576206 | 1.4:+23889636 | None:intergenic |
| AAGGACACTGCAATCGGGTG+CGG | 0.585643 | 1.4:-23890205 | MS.gene88616:CDS |
| TCAGTTAACTGATATAGGAA+CGG | 0.586143 | 1.4:-23889891 | MS.gene88616:CDS |
| TATCAAGTTGCATATGGTGA+TGG | 0.587507 | 1.4:-23891246 | MS.gene88616:CDS |
| ACAGAAAGTTCCAATATCAT+CGG | 0.590346 | 1.4:+23889631 | None:intergenic |
| GGATACTGTCTTATCTCTCG+AGG | 0.592311 | 1.4:-23890076 | MS.gene88616:CDS |
| TAAACGAAGCAGAAGTAGCA+GGG | 0.592676 | 1.4:+23891343 | None:intergenic |
| GGTGGACCTATGTCTTTCGT+GGG | 0.595416 | 1.4:-23890130 | MS.gene88616:CDS |
| TGATTATAACATTGATCACA+AGG | 0.597383 | 1.4:+23891384 | None:intergenic |
| ATAGGGAATATTCAGCAAGA+AGG | 0.599831 | 1.4:-23889572 | MS.gene88616:CDS |
| TAACCTGGTAATGGCTGTGC+CGG | 0.602170 | 1.4:+23889850 | None:intergenic |
| AAAGCATTGTAGGCAACAGT+AGG | 0.603981 | 1.4:+23889827 | None:intergenic |
| GTAGGCAACAGTAGGTAACC+TGG | 0.609612 | 1.4:+23889835 | None:intergenic |
| GAATGTTTGTTGGAGCAGCT+GGG | 0.609714 | 1.4:-23890168 | MS.gene88616:CDS |
| TTATCAAGGACACTGCAATC+GGG | 0.611505 | 1.4:-23890210 | MS.gene88616:CDS |
| AGGAACGGGAGGAGTTGTCA+TGG | 0.613607 | 1.4:-23889876 | MS.gene88616:CDS |
| CAATGCCCGTAGGTGCAATG+TGG | 0.615447 | 1.4:-23890015 | MS.gene88616:CDS |
| GGAGGAGTTGTCATGGACAC+CGG | 0.620713 | 1.4:-23889869 | MS.gene88616:CDS |
| AATGCCCGTAGGTGCAATGT+GGG | 0.625127 | 1.4:-23890014 | MS.gene88616:CDS |
| ATGGAAAGACCAGAAGGTGA+AGG | 0.625165 | 1.4:+23889596 | None:intergenic |
| GGTGATGGGTCGTCTACCAA+AGG | 0.626771 | 1.4:-23891231 | MS.gene88616:intron |
| ATAGAAACTCTGGGAGCACG+TGG | 0.629230 | 1.4:+23889770 | None:intergenic |
| GGACGCCAAGCAATGCCCGT+AGG | 0.637191 | 1.4:-23890025 | MS.gene88616:CDS |
| CGACACTGTTGGAACTCGAA+CGG | 0.646861 | 1.4:+23889712 | None:intergenic |
| GCTGGGTTGTTAGGCCTCGG+AGG | 0.647032 | 1.4:-23890151 | MS.gene88616:CDS |
| GGGTGCGGACATTGGAACAA+GGG | 0.650156 | 1.4:-23890190 | MS.gene88616:CDS |
| ATGTTGCTTGCCGGAAAGGG+AGG | 0.650168 | 1.4:-23891275 | MS.gene88616:CDS |
| CCTATGATGGAAAGACCAGA+AGG | 0.651297 | 1.4:+23889590 | None:intergenic |
| CAATTGGGAGCCCAAACCGG+CGG | 0.653313 | 1.4:-23890106 | MS.gene88616:CDS |
| TTAACTGATATAGGAACGGG+AGG | 0.659844 | 1.4:-23889887 | MS.gene88616:CDS |
| TAGAACGGGTTATGAATGAG+AGG | 0.671064 | 1.4:+23889989 | None:intergenic |
| AGAGATAAGACAGTATCCAA+AGG | 0.673865 | 1.4:+23890081 | None:intergenic |
| AAGACATAGGTCCACCTCCG+AGG | 0.695349 | 1.4:+23890137 | None:intergenic |
| TTGAAACCATAACCATCGGG+CGG | 0.703144 | 1.4:-23890237 | MS.gene88616:CDS |
| GCTTGCCGGAAAGGGAGGTG+TGG | 0.712007 | 1.4:-23891270 | MS.gene88616:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAATTTAATTTAACATGTT+AGG | - | chr1.4:23889909-23889928 | MS.gene88616:CDS | 15.0% |
| !!! | TGATAAGGAATTAATTTTAA+AGG | - | chr1.4:23890262-23890281 | MS.gene88616:intron | 15.0% |
| !!! | TTTTAGATGATGTTTATATT+AGG | - | chr1.4:23889845-23889864 | MS.gene88616:CDS | 15.0% |
| !! | AAAACAAAGTGATTTATGTT+TGG | + | chr1.4:23890483-23890502 | None:intergenic | 20.0% |
| !! | AAAGAGTAGAATAAAATTCA+TGG | - | chr1.4:23890625-23890644 | MS.gene88616:intron | 20.0% |
| !! | AGTTAACTGAAATATTTGTT+CGG | + | chr1.4:23891039-23891058 | None:intergenic | 20.0% |
| !! | ATATTTCAGTTAACTGATAT+AGG | - | chr1.4:23891044-23891063 | MS.gene88616:intron | 20.0% |
| !!! | AAGCTAGAATTTTTAGATTT+TGG | - | chr1.4:23890354-23890373 | MS.gene88616:intron | 20.0% |
| !!! | ACTTTGTTTTCAACTTTTAT+TGG | - | chr1.4:23890493-23890512 | MS.gene88616:intron | 20.0% |
| !!! | AGACAAAATTGATTCTAAAA+GGG | - | chr1.4:23889882-23889901 | MS.gene88616:CDS | 20.0% |
| ! | AAGCTTAATTAATATTCCAC+TGG | + | chr1.4:23890588-23890607 | None:intergenic | 25.0% |
| ! | TGAAATATTTGTTCGGATAT+GGG | + | chr1.4:23891032-23891051 | None:intergenic | 25.0% |
| ! | TGATTATAACATTGATCACA+AGG | + | chr1.4:23889559-23889578 | None:intergenic | 25.0% |
| !! | GAGACAAAATTGATTCTAAA+AGG | - | chr1.4:23889881-23889900 | MS.gene88616:CDS | 25.0% |
| !! | TATATTAGGTTCCATTTTAG+AGG | - | chr1.4:23889859-23889878 | MS.gene88616:CDS | 25.0% |
| !! | TTGTTTCCAATGTTGATAAA+GGG | - | chr1.4:23890670-23890689 | MS.gene88616:intron | 25.0% |
| !! | TTTGTTTCCAATGTTGATAA+AGG | - | chr1.4:23890669-23890688 | MS.gene88616:intron | 25.0% |
| !!! | AATTATCATTTGCCCTTTTT+TGG | + | chr1.4:23890150-23890169 | None:intergenic | 25.0% |
| !!! | TGTATGTTTGGTTTTGTTTT+TGG | - | chr1.4:23890238-23890257 | MS.gene88616:CDS | 25.0% |
| !!! | TGTTTTAAGCACATTGTTTA+AGG | + | chr1.4:23890437-23890456 | None:intergenic | 25.0% |
| AACAAAGCAAGAAAAATGTG+TGG | + | chr1.4:23889770-23889789 | None:intergenic | 30.0% | |
| ACAGAAAGTTCCAATATCAT+CGG | + | chr1.4:23891312-23891331 | None:intergenic | 30.0% | |
| ATTCACATTGAGTGTATGTT+TGG | - | chr1.4:23890226-23890245 | MS.gene88616:CDS | 30.0% | |
| ATTCAGGAAGTGATATTGTT+TGG | - | chr1.4:23889521-23889540 | MS.gene88616:CDS | 30.0% | |
| CACCAAACATAACCAAAAAA+GGG | - | chr1.4:23890135-23890154 | MS.gene88616:CDS | 30.0% | |
| CTGAAATATTTGTTCGGATA+TGG | + | chr1.4:23891033-23891052 | None:intergenic | 30.0% | |
| GAAAAATAAAACGACACTGT+TGG | + | chr1.4:23891242-23891261 | None:intergenic | 30.0% | |
| GAAATATTTGTTCGGATATG+GGG | + | chr1.4:23891031-23891050 | None:intergenic | 30.0% | |
| GTGTCAAAAATAGAAACTCT+GGG | + | chr1.4:23891182-23891201 | None:intergenic | 30.0% | |
| TCAGTTAACTGATATAGGAA+CGG | - | chr1.4:23891049-23891068 | MS.gene88616:intron | 30.0% | |
| ! | AGTTTTACTCATATTACCAG+TGG | - | chr1.4:23890569-23890588 | MS.gene88616:intron | 30.0% |
| !! | CAATTTTGTCTCCTCTAAAA+TGG | + | chr1.4:23889873-23889892 | None:intergenic | 30.0% |
| !!! | ACAGTGTCGTTTTATTTTTC+TGG | - | chr1.4:23891242-23891261 | MS.gene88616:CDS | 30.0% |
| !!! | ACTAATGGTTTTGTAGGATT+TGG | - | chr1.4:23891413-23891432 | MS.gene88616:CDS | 30.0% |
| !!! | GGTTTTGTTTTTGGATGATA+AGG | - | chr1.4:23890247-23890266 | MS.gene88616:CDS | 30.0% |
| AGAGATAAGACAGTATCCAA+AGG | + | chr1.4:23890862-23890881 | None:intergenic | 35.0% | |
| ATAGGGAATATTCAGCAAGA+AGG | - | chr1.4:23891368-23891387 | MS.gene88616:CDS | 35.0% | |
| CAGTTAACTGATATAGGAAC+GGG | - | chr1.4:23891050-23891069 | MS.gene88616:intron | 35.0% | |
| CGTGTCAAAAATAGAAACTC+TGG | + | chr1.4:23891183-23891202 | None:intergenic | 35.0% | |
| CTACTTCTGCTTCGTTTATT+GGG | - | chr1.4:23889602-23889621 | MS.gene88616:CDS | 35.0% | |
| GAAGTAGCAGGGTTAAAAAT+AGG | + | chr1.4:23889589-23889608 | None:intergenic | 35.0% | |
| GCACCAAACATAACCAAAAA+AGG | - | chr1.4:23890134-23890153 | MS.gene88616:CDS | 35.0% | |
| GTTTCTATCGATGGAACTAA+TGG | - | chr1.4:23891398-23891417 | MS.gene88616:CDS | 35.0% | |
| TACTTCTGCTTCGTTTATTG+GGG | - | chr1.4:23889603-23889622 | MS.gene88616:CDS | 35.0% | |
| TTGCTGAATATTCCCTATGA+TGG | + | chr1.4:23891366-23891385 | None:intergenic | 35.0% | |
| ! | ATCAAGTTGCATATGGTGAT+GGG | - | chr1.4:23889695-23889714 | MS.gene88616:CDS | 35.0% |
| ! | GCTTAAAACACTTGTTAGCA+TGG | - | chr1.4:23890447-23890466 | MS.gene88616:intron | 35.0% |
| ! | GGAATTCAAGTTTCTATCGA+TGG | - | chr1.4:23891389-23891408 | MS.gene88616:CDS | 35.0% |
| ! | TATCAAGTTGCATATGGTGA+TGG | - | chr1.4:23889694-23889713 | MS.gene88616:CDS | 35.0% |
| ! | TGTGGATATCAAGTTGCATA+TGG | - | chr1.4:23889688-23889707 | MS.gene88616:CDS | 35.0% |
| !!! | GATGGAACTAATGGTTTTGT+AGG | - | chr1.4:23891407-23891426 | MS.gene88616:CDS | 35.0% |
| !!! | GTGTCGTTTTATTTTTCTGG+TGG | - | chr1.4:23891245-23891264 | MS.gene88616:CDS | 35.0% |
| !!! | TGCCCTTTTTTGGTTATGTT+TGG | + | chr1.4:23890140-23890159 | None:intergenic | 35.0% |
| AAAGTTCCAATATCATCGGC+CGG | + | chr1.4:23891308-23891327 | None:intergenic | 40.0% | |
| AACAGTAGGTAACCTGGTAA+TGG | + | chr1.4:23891102-23891121 | None:intergenic | 40.0% | |
| AAGCGTCCCTTTATCAACAT+TGG | + | chr1.4:23890679-23890698 | None:intergenic | 40.0% | |
| ATAAACGAAGCAGAAGTAGC+AGG | + | chr1.4:23889601-23889620 | None:intergenic | 40.0% | |
| CTCTTGAAACCATAACCATC+GGG | - | chr1.4:23890700-23890719 | MS.gene88616:intron | 40.0% | |
| CTTCACACAGTACATACCTT+TGG | + | chr1.4:23889728-23889747 | None:intergenic | 40.0% | |
| CTTCTACTACGTCTCACTTT+CGG | - | chr1.4:23890980-23890999 | MS.gene88616:intron | 40.0% | |
| GACACGTGTTATGACTTGAA+CGG | - | chr1.4:23891197-23891216 | MS.gene88616:intron | 40.0% | |
| GATTGCAGTGTCCTTGATAA+CGG | + | chr1.4:23890730-23890749 | None:intergenic | 40.0% | |
| GCTACTTCTGCTTCGTTTAT+TGG | - | chr1.4:23889601-23889620 | MS.gene88616:CDS | 40.0% | |
| GCTCTTGAAACCATAACCAT+CGG | - | chr1.4:23890699-23890718 | MS.gene88616:intron | 40.0% | |
| GTTATCAAGGACACTGCAAT+CGG | - | chr1.4:23890729-23890748 | MS.gene88616:intron | 40.0% | |
| TAAACGAAGCAGAAGTAGCA+GGG | + | chr1.4:23889600-23889619 | None:intergenic | 40.0% | |
| TAGTAGAAGCTAGGGTAGAA+CGG | + | chr1.4:23890969-23890988 | None:intergenic | 40.0% | |
| TGGAACAAGGGAATGTTTGT+TGG | - | chr1.4:23890762-23890781 | MS.gene88616:intron | 40.0% | |
| TTAACTGATATAGGAACGGG+AGG | - | chr1.4:23891053-23891072 | MS.gene88616:intron | 40.0% | |
| TTATCAAGGACACTGCAATC+GGG | - | chr1.4:23890730-23890749 | MS.gene88616:intron | 40.0% | |
| TTCTACTACGTCTCACTTTC+GGG | - | chr1.4:23890981-23891000 | MS.gene88616:intron | 40.0% | |
| ! | CTTCTGGTCTTTCCATCATA+GGG | - | chr1.4:23891351-23891370 | MS.gene88616:CDS | 40.0% |
| !! | AAAGCATTGTAGGCAACAGT+AGG | + | chr1.4:23891116-23891135 | None:intergenic | 40.0% |
| !! | TAGAACGGGTTATGAATGAG+AGG | + | chr1.4:23890954-23890973 | None:intergenic | 40.0% |
| !! | TTGATGATGATGTTGCTTGC+CGG | - | chr1.4:23889656-23889675 | MS.gene88616:CDS | 40.0% |
| AAATCTTAACCTTTCCCGCC+AGG | - | chr1.4:23891270-23891289 | MS.gene88616:CDS | 45.0% | |
| AAGTTCCAATATCATCGGCC+GGG | + | chr1.4:23891307-23891326 | None:intergenic | 45.0% | |
| AATTGGCCCACGAAAGACAT+AGG | + | chr1.4:23890819-23890838 | None:intergenic | 45.0% | |
| AGTAGAAGCTAGGGTAGAAC+GGG | + | chr1.4:23890968-23890987 | None:intergenic | 45.0% | |
| AGTGAGACGTAGTAGAAGCT+AGG | + | chr1.4:23890978-23890997 | None:intergenic | 45.0% | |
| ATGGAAAGACCAGAAGGTGA+AGG | + | chr1.4:23891347-23891366 | None:intergenic | 45.0% | |
| ATGTCTTTCGTGGGCCAATT+GGG | - | chr1.4:23890819-23890838 | MS.gene88616:intron | 45.0% | |
| CAAAAAATTCCTGGCGGGAA+AGG | + | chr1.4:23891282-23891301 | None:intergenic | 45.0% | |
| CGGGATCAAAAAATTCCTGG+CGG | + | chr1.4:23891288-23891307 | None:intergenic | 45.0% | |
| GGATACTGTCTTATCTCTCG+AGG | - | chr1.4:23890864-23890883 | MS.gene88616:intron | 45.0% | |
| GGGATCAAAAAATTCCTGGC+GGG | + | chr1.4:23891287-23891306 | None:intergenic | 45.0% | |
| GTGAGACGTAGTAGAAGCTA+GGG | + | chr1.4:23890977-23890996 | None:intergenic | 45.0% | |
| TATGTCTTTCGTGGGCCAAT+TGG | - | chr1.4:23890818-23890837 | MS.gene88616:intron | 45.0% | |
| TCATCCGGTTCACTCGAATT+CGG | - | chr1.4:23890894-23890913 | MS.gene88616:intron | 45.0% | |
| TTCTGCTTCGTTTATTGGGG+TGG | - | chr1.4:23889606-23889625 | MS.gene88616:CDS | 45.0% | |
| TTGAAACCATAACCATCGGG+CGG | - | chr1.4:23890703-23890722 | MS.gene88616:intron | 45.0% | |
| ! | ATGATGTTGCTTGCCGGAAA+GGG | - | chr1.4:23889662-23889681 | MS.gene88616:CDS | 45.0% |
| ! | CCTATGATGGAAAGACCAGA+AGG | + | chr1.4:23891353-23891372 | None:intergenic | 45.0% |
| ! | CCTTCTGGTCTTTCCATCAT+AGG | - | chr1.4:23891350-23891369 | MS.gene88616:CDS | 45.0% |
| ! | GAATGTTTGTTGGAGCAGCT+GGG | - | chr1.4:23890772-23890791 | MS.gene88616:intron | 45.0% |
| !! | TGCATCGCGAAAAGCATTGT+AGG | + | chr1.4:23891126-23891145 | None:intergenic | 45.0% |
| !!! | CGCCAGGAATTTTTTGATCC+CGG | - | chr1.4:23891286-23891305 | MS.gene88616:CDS | 45.0% |
| AATGCCCGTAGGTGCAATGT+GGG | - | chr1.4:23890926-23890945 | MS.gene88616:intron | 50.0% | |
| AGGAACCCACATTGCACCTA+CGG | + | chr1.4:23890934-23890953 | None:intergenic | 50.0% | |
| AGGTGGACCTATGTCTTTCG+TGG | - | chr1.4:23890809-23890828 | MS.gene88616:intron | 50.0% | |
| CGACACTGTTGGAACTCGAA+CGG | + | chr1.4:23891231-23891250 | None:intergenic | 50.0% | |
| GATATCCACACCTCCCTTTC+CGG | + | chr1.4:23889678-23889697 | None:intergenic | 50.0% | |
| GCATTTGCTCCTTCACCTTC+TGG | - | chr1.4:23891335-23891354 | MS.gene88616:CDS | 50.0% | |
| GGCCGGGATCAAAAAATTCC+TGG | + | chr1.4:23891291-23891310 | None:intergenic | 50.0% | |
| GGTGGACCTATGTCTTTCGT+GGG | - | chr1.4:23890810-23890829 | MS.gene88616:intron | 50.0% | |
| GTAGGCAACAGTAGGTAACC+TGG | + | chr1.4:23891108-23891127 | None:intergenic | 50.0% | |
| TGTCTTATCTCTCGAGGCAC+TGG | - | chr1.4:23890870-23890889 | MS.gene88616:intron | 50.0% | |
| TTGATCCCGGCCGATGATAT+TGG | - | chr1.4:23891299-23891318 | MS.gene88616:CDS | 50.0% | |
| ! | ATAGAAACTCTGGGAGCACG+TGG | + | chr1.4:23891173-23891192 | None:intergenic | 50.0% |
| ! | GATGATGTTGCTTGCCGGAA+AGG | - | chr1.4:23889661-23889680 | MS.gene88616:CDS | 50.0% |
| ! | GGAATGTTTGTTGGAGCAGC+TGG | - | chr1.4:23890771-23890790 | MS.gene88616:intron | 50.0% |
| ! | TCACTTTCGGGTCTTGCAGT+TGG | - | chr1.4:23890993-23891012 | MS.gene88616:intron | 50.0% |
| !! | TAACCTGGTAATGGCTGTGC+CGG | + | chr1.4:23891093-23891112 | None:intergenic | 50.0% |
| AAGACATAGGTCCACCTCCG+AGG | + | chr1.4:23890806-23890825 | None:intergenic | 55.0% | |
| AAGGACACTGCAATCGGGTG+CGG | - | chr1.4:23890735-23890754 | MS.gene88616:intron | 55.0% | |
| ACAGTATCCAAAGGCTCCGC+CGG | + | chr1.4:23890853-23890872 | None:intergenic | 55.0% | |
| AGGAACGGGAGGAGTTGTCA+TGG | - | chr1.4:23891064-23891083 | MS.gene88616:intron | 55.0% | |
| CAATGCCCGTAGGTGCAATG+TGG | - | chr1.4:23890925-23890944 | MS.gene88616:intron | 55.0% | |
| GCGTCCGAATTCGAGTGAAC+CGG | + | chr1.4:23890901-23890920 | None:intergenic | 55.0% | |
| GGAACCCACATTGCACCTAC+GGG | + | chr1.4:23890933-23890952 | None:intergenic | 55.0% | |
| GGAGGAGTTGTCATGGACAC+CGG | - | chr1.4:23891071-23891090 | MS.gene88616:intron | 55.0% | |
| GGGTGCGGACATTGGAACAA+GGG | - | chr1.4:23890750-23890769 | MS.gene88616:intron | 55.0% | |
| GTTGGAGCAGCTGGGTTGTT+AGG | - | chr1.4:23890780-23890799 | MS.gene88616:intron | 55.0% | |
| ! | ATGTTGCTTGCCGGAAAGGG+AGG | - | chr1.4:23889665-23889684 | MS.gene88616:CDS | 55.0% |
| ! | CTTTCGGGTCTTGCAGTTGG+AGG | - | chr1.4:23890996-23891015 | MS.gene88616:intron | 55.0% |
| ! | TTGCACCTACGGGCATTGCT+TGG | + | chr1.4:23890923-23890942 | None:intergenic | 55.0% |
| !! | GGTGATGGGTCGTCTACCAA+AGG | - | chr1.4:23889709-23889728 | MS.gene88616:CDS | 55.0% |
| !! | TCTCGAGGCACTGGATCATC+CGG | - | chr1.4:23890879-23890898 | MS.gene88616:intron | 55.0% |
| AACGGTCCGCCCGATGGTTA+TGG | + | chr1.4:23890712-23890731 | None:intergenic | 60.0% | |
| ACACCGGCACAGCCATTACC+AGG | - | chr1.4:23891087-23891106 | MS.gene88616:intron | 60.0% | |
| CAATTGGGAGCCCAAACCGG+CGG | - | chr1.4:23890834-23890853 | MS.gene88616:intron | 60.0% | |
| CATCGGGCGGACCGTTATCA+AGG | - | chr1.4:23890716-23890735 | MS.gene88616:intron | 60.0% | |
| CGGGTGCGGACATTGGAACA+AGG | - | chr1.4:23890749-23890768 | MS.gene88616:intron | 60.0% | |
| CTGCAATCGGGTGCGGACAT+TGG | - | chr1.4:23890742-23890761 | MS.gene88616:intron | 60.0% | |
| GCAGCTGGGTTGTTAGGCCT+CGG | - | chr1.4:23890786-23890805 | MS.gene88616:intron | 60.0% | |
| GGCCAATTGGGAGCCCAAAC+CGG | - | chr1.4:23890831-23890850 | MS.gene88616:intron | 60.0% | |
| ! | ATCCAAAGGCTCCGCCGGTT+TGG | + | chr1.4:23890848-23890867 | None:intergenic | 60.0% |
| !! | CTTGATAACGGTCCGCCCGA+TGG | + | chr1.4:23890718-23890737 | None:intergenic | 60.0% |
| !! | TCCAAAGGCTCCGCCGGTTT+GGG | + | chr1.4:23890847-23890866 | None:intergenic | 60.0% |
| GCTGGGTTGTTAGGCCTCGG+AGG | - | chr1.4:23890789-23890808 | MS.gene88616:intron | 65.0% | |
| GCTTGCCGGAAAGGGAGGTG+TGG | - | chr1.4:23889670-23889689 | MS.gene88616:CDS | 65.0% | |
| GGACGCCAAGCAATGCCCGT+AGG | - | chr1.4:23890915-23890934 | MS.gene88616:intron | 65.0% | |
| GGGTTGTTAGGCCTCGGAGG+TGG | - | chr1.4:23890792-23890811 | MS.gene88616:intron | 65.0% | |
| !! | CGCCGGTTTGGGCTCCCAAT+TGG | + | chr1.4:23890836-23890855 | None:intergenic | 65.0% |
| GCCCAAACCGGCGGAGCCTT+TGG | - | chr1.4:23890843-23890862 | MS.gene88616:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 23889511 | 23891451 | 23889511 | ID=MS.gene88616 |
| chr1.4 | mRNA | 23889511 | 23891451 | 23889511 | ID=MS.gene88616.t1;Parent=MS.gene88616 |
| chr1.4 | exon | 23891232 | 23891451 | 23891232 | ID=MS.gene88616.t1.exon1;Parent=MS.gene88616.t1 |
| chr1.4 | CDS | 23891232 | 23891451 | 23891232 | ID=cds.MS.gene88616.t1;Parent=MS.gene88616.t1 |
| chr1.4 | exon | 23889511 | 23890271 | 23889511 | ID=MS.gene88616.t1.exon2;Parent=MS.gene88616.t1 |
| chr1.4 | CDS | 23889511 | 23890271 | 23889511 | ID=cds.MS.gene88616.t1;Parent=MS.gene88616.t1 |
| Gene Sequence |
| Protein sequence |
