Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88951.t1 | XP_013466196.1 | 95.4 | 608 | 28 | 0 | 1 | 608 | 181 | 788 | 0.00E+00 | 1185.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88951.t1 | Q9XIL5 | 58.8 | 609 | 246 | 4 | 2 | 607 | 230 | 836 | 1.4e-214 | 747.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88951.t1 | A0A072VEK1 | 95.4 | 608 | 28 | 0 | 1 | 608 | 181 | 788 | 0.0e+00 | 1185.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050464 | MS.gene88951 | 0.807441 | 5.05E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene88951 | 0.819661 | 1.03E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene88951 | 0.826609 | 2.47E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene88951 | 0.800294 | 1.54E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene88951 | 0.831631 | 1.50E-55 | -1.69E-46 |
| MS.gene053971 | MS.gene88951 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene88951 | 0.842366 | 2.70E-58 | -1.69E-46 |
| MS.gene05553 | MS.gene88951 | 0.826538 | 2.57E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene88951 | 0.8156 | 8.51E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene88951 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene88951 | 0.825844 | 3.76E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene88951 | 0.809494 | 1.84E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene88951 | 0.835992 | 1.21E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene88951 | 0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene88951 | 0.810475 | 1.13E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene88951 | 0.813383 | 2.63E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene88951 | 0.814302 | 1.65E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88951.t1 | MTR_1g026035 | 95.395 | 608 | 28 | 0 | 1 | 608 | 181 | 788 | 0.0 | 1210 |
| MS.gene88951.t1 | MTR_0381s0010 | 90.132 | 608 | 25 | 1 | 1 | 608 | 2 | 574 | 0.0 | 1126 |
| MS.gene88951.t1 | MTR_1g112240 | 25.000 | 364 | 255 | 8 | 3 | 363 | 130 | 478 | 1.11e-20 | 96.3 |
| MS.gene88951.t1 | MTR_1g112240 | 23.101 | 316 | 231 | 5 | 65 | 378 | 118 | 423 | 1.12e-14 | 77.4 |
| MS.gene88951.t1 | MTR_3g105900 | 22.923 | 349 | 253 | 6 | 20 | 366 | 280 | 614 | 5.53e-17 | 85.5 |
| MS.gene88951.t1 | MTR_3g105900 | 23.864 | 352 | 254 | 6 | 1 | 351 | 331 | 669 | 5.18e-13 | 72.8 |
| MS.gene88951.t1 | MTR_3g114700 | 22.043 | 372 | 273 | 8 | 16 | 386 | 149 | 504 | 2.48e-15 | 79.3 |
| MS.gene88951.t1 | MTR_6g077540 | 23.103 | 290 | 210 | 6 | 64 | 351 | 240 | 518 | 6.84e-15 | 78.2 |
| MS.gene88951.t1 | MTR_6g077540 | 21.379 | 290 | 215 | 5 | 39 | 327 | 113 | 390 | 6.23e-12 | 68.9 |
| MS.gene88951.t1 | MTR_4g075270 | 22.449 | 343 | 248 | 7 | 32 | 371 | 310 | 637 | 7.93e-15 | 78.6 |
| MS.gene88951.t1 | MTR_3g091460 | 26.333 | 300 | 203 | 7 | 43 | 335 | 204 | 492 | 8.62e-15 | 78.2 |
| MS.gene88951.t1 | MTR_1g114300 | 27.273 | 198 | 131 | 5 | 1 | 198 | 306 | 490 | 3.42e-14 | 75.9 |
| MS.gene88951.t1 | MTR_3g037490 | 24.359 | 312 | 206 | 6 | 31 | 327 | 214 | 510 | 9.37e-14 | 74.7 |
| MS.gene88951.t1 | MTR_3g037490 | 23.051 | 295 | 205 | 6 | 82 | 369 | 86 | 365 | 7.70e-11 | 65.5 |
| MS.gene88951.t1 | MTR_1g008310 | 23.547 | 327 | 233 | 8 | 40 | 363 | 174 | 486 | 1.19e-13 | 74.3 |
| MS.gene88951.t1 | MTR_0308s0020 | 23.939 | 330 | 229 | 8 | 39 | 363 | 83 | 395 | 1.20e-13 | 74.3 |
| MS.gene88951.t1 | MTR_6g079180 | 21.724 | 290 | 214 | 6 | 64 | 351 | 58 | 336 | 1.21e-13 | 73.2 |
| MS.gene88951.t1 | MTR_3g053350 | 23.077 | 299 | 217 | 6 | 32 | 329 | 509 | 795 | 1.52e-13 | 74.3 |
| MS.gene88951.t1 | MTR_7g012890 | 22.923 | 349 | 251 | 7 | 64 | 410 | 215 | 547 | 1.92e-13 | 73.6 |
| MS.gene88951.t1 | MTR_1g031720 | 22.086 | 326 | 240 | 7 | 22 | 346 | 289 | 601 | 1.94e-13 | 74.3 |
| MS.gene88951.t1 | MTR_1g031720 | 20.823 | 389 | 255 | 7 | 15 | 365 | 177 | 550 | 5.04e-11 | 66.2 |
| MS.gene88951.t1 | MTR_2g030540 | 23.389 | 419 | 246 | 14 | 1 | 355 | 214 | 621 | 2.57e-13 | 73.6 |
| MS.gene88951.t1 | MTR_2g049740 | 22.039 | 363 | 245 | 9 | 32 | 363 | 213 | 568 | 3.12e-13 | 73.6 |
| MS.gene88951.t1 | MTR_2g049740 | 23.747 | 379 | 248 | 12 | 1 | 365 | 499 | 850 | 1.58e-12 | 71.2 |
| MS.gene88951.t1 | MTR_6g079210 | 21.379 | 290 | 215 | 6 | 64 | 351 | 58 | 336 | 4.04e-13 | 72.0 |
| MS.gene88951.t1 | MTR_6g069840 | 20.755 | 318 | 222 | 9 | 54 | 361 | 29 | 326 | 4.29e-13 | 72.4 |
| MS.gene88951.t1 | MTR_0014s0250 | 22.284 | 359 | 230 | 8 | 9 | 366 | 197 | 507 | 5.01e-13 | 72.4 |
| MS.gene88951.t1 | MTR_8g071970 | 23.662 | 355 | 246 | 10 | 16 | 363 | 321 | 657 | 7.23e-13 | 72.0 |
| MS.gene88951.t1 | MTR_1g113010 | 25.938 | 320 | 218 | 8 | 24 | 335 | 182 | 490 | 8.14e-13 | 71.6 |
| MS.gene88951.t1 | MTR_5g090210 | 21.490 | 349 | 225 | 8 | 16 | 363 | 314 | 614 | 8.44e-13 | 72.0 |
| MS.gene88951.t1 | MTR_5g090210 | 21.114 | 341 | 253 | 7 | 33 | 371 | 401 | 727 | 1.66e-12 | 70.9 |
| MS.gene88951.t1 | MTR_7g091410 | 22.572 | 381 | 267 | 8 | 1 | 372 | 176 | 537 | 8.63e-13 | 72.0 |
| MS.gene88951.t1 | MTR_6g080210 | 22.930 | 314 | 229 | 6 | 39 | 351 | 83 | 384 | 9.60e-13 | 71.2 |
| MS.gene88951.t1 | MTR_5g008300 | 22.222 | 306 | 223 | 5 | 26 | 328 | 280 | 573 | 1.53e-12 | 71.6 |
| MS.gene88951.t1 | MTR_7g091410 | 22.572 | 381 | 267 | 8 | 1 | 372 | 37 | 398 | 1.64e-12 | 70.9 |
| MS.gene88951.t1 | MTR_1g484840 | 22.300 | 287 | 207 | 8 | 78 | 363 | 158 | 429 | 2.39e-12 | 70.5 |
| MS.gene88951.t1 | MTR_2g036560 | 24.561 | 228 | 149 | 5 | 107 | 324 | 254 | 468 | 3.41e-12 | 70.1 |
| MS.gene88951.t1 | MTR_6g471100 | 23.684 | 342 | 237 | 13 | 37 | 372 | 95 | 418 | 3.97e-12 | 69.7 |
| MS.gene88951.t1 | MTR_7g007400 | 23.667 | 300 | 213 | 8 | 31 | 327 | 236 | 522 | 4.82e-12 | 69.3 |
| MS.gene88951.t1 | MTR_8g107050 | 21.287 | 404 | 248 | 10 | 32 | 371 | 77 | 474 | 4.82e-12 | 69.3 |
| MS.gene88951.t1 | MTR_8g107050 | 21.287 | 404 | 248 | 10 | 32 | 371 | 77 | 474 | 6.09e-12 | 68.9 |
| MS.gene88951.t1 | MTR_8g103480 | 21.842 | 380 | 265 | 10 | 10 | 384 | 123 | 475 | 6.37e-12 | 68.9 |
| MS.gene88951.t1 | MTR_1g010020 | 24.399 | 291 | 174 | 7 | 79 | 366 | 141 | 388 | 6.65e-12 | 68.9 |
| MS.gene88951.t1 | MTR_1g010020 | 24.399 | 291 | 174 | 7 | 79 | 366 | 160 | 407 | 7.70e-12 | 68.6 |
| MS.gene88951.t1 | MTR_4g108060 | 23.292 | 322 | 183 | 10 | 16 | 328 | 145 | 411 | 8.08e-12 | 68.2 |
| MS.gene88951.t1 | MTR_6g079830 | 20.526 | 380 | 251 | 6 | 9 | 387 | 224 | 553 | 8.69e-12 | 68.6 |
| MS.gene88951.t1 | MTR_7g405940 | 22.667 | 300 | 218 | 6 | 31 | 328 | 254 | 541 | 1.07e-11 | 68.2 |
| MS.gene88951.t1 | MTR_4g091600 | 23.077 | 351 | 240 | 11 | 32 | 372 | 138 | 468 | 1.11e-11 | 68.6 |
| MS.gene88951.t1 | MTR_4g108060 | 23.292 | 322 | 183 | 10 | 16 | 328 | 279 | 545 | 1.15e-11 | 68.2 |
| MS.gene88951.t1 | MTR_7g066990 | 22.687 | 335 | 237 | 10 | 43 | 372 | 115 | 432 | 1.21e-11 | 68.2 |
| MS.gene88951.t1 | MTR_4g074390 | 24.204 | 314 | 215 | 7 | 21 | 328 | 249 | 545 | 1.25e-11 | 67.8 |
| MS.gene88951.t1 | MTR_8g089700 | 20.513 | 351 | 252 | 9 | 20 | 363 | 125 | 455 | 1.47e-11 | 67.4 |
| MS.gene88951.t1 | MTR_1g068960 | 24.925 | 333 | 228 | 8 | 36 | 363 | 158 | 473 | 1.49e-11 | 67.8 |
| MS.gene88951.t1 | MTR_0014s0210 | 24.332 | 337 | 228 | 8 | 16 | 346 | 53 | 368 | 1.49e-11 | 67.4 |
| MS.gene88951.t1 | MTR_7g091410 | 22.899 | 345 | 248 | 8 | 32 | 372 | 3 | 333 | 1.56e-11 | 67.8 |
| MS.gene88951.t1 | MTR_8g105170 | 24.554 | 224 | 161 | 4 | 144 | 363 | 294 | 513 | 1.58e-11 | 68.2 |
| MS.gene88951.t1 | MTR_6g069840 | 20.243 | 247 | 181 | 4 | 123 | 361 | 72 | 310 | 1.96e-11 | 67.0 |
| MS.gene88951.t1 | MTR_6g079590 | 22.018 | 327 | 241 | 6 | 39 | 364 | 91 | 404 | 2.47e-11 | 67.0 |
| MS.gene88951.t1 | MTR_0014s0180 | 22.468 | 316 | 234 | 5 | 64 | 378 | 217 | 522 | 2.76e-11 | 66.6 |
| MS.gene88951.t1 | MTR_7g076550 | 23.948 | 309 | 225 | 6 | 61 | 368 | 223 | 522 | 2.76e-11 | 66.6 |
| MS.gene88951.t1 | MTR_1g045850 | 23.292 | 322 | 225 | 9 | 47 | 363 | 47 | 351 | 2.83e-11 | 66.6 |
| MS.gene88951.t1 | MTR_5g007250 | 20.909 | 330 | 234 | 7 | 14 | 327 | 499 | 817 | 3.37e-11 | 67.0 |
| MS.gene88951.t1 | MTR_1g095880 | 21.652 | 351 | 261 | 7 | 22 | 371 | 258 | 595 | 3.63e-11 | 66.6 |
| MS.gene88951.t1 | MTR_3g061000 | 24.658 | 219 | 155 | 5 | 152 | 365 | 129 | 342 | 5.66e-11 | 65.9 |
| MS.gene88951.t1 | MTR_6g079920 | 20.402 | 348 | 257 | 8 | 16 | 359 | 231 | 562 | 6.70e-11 | 65.5 |
| MS.gene88951.t1 | MTR_0654s0010 | 22.472 | 267 | 193 | 6 | 64 | 327 | 1 | 256 | 8.48e-11 | 64.7 |
| MS.gene88951.t1 | MTR_6g079250 | 21.379 | 290 | 215 | 6 | 64 | 351 | 58 | 336 | 8.67e-11 | 64.7 |
| MS.gene88951.t1 | MTR_4g076540 | 21.250 | 320 | 227 | 8 | 16 | 328 | 435 | 736 | 9.91e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88951.t1 | AT2G15820 | 58.785 | 609 | 246 | 4 | 2 | 607 | 230 | 836 | 0.0 | 736 |
| MS.gene88951.t1 | AT5G61990 | 23.262 | 374 | 265 | 9 | 14 | 378 | 596 | 956 | 2.46e-15 | 80.5 |
| MS.gene88951.t1 | AT2G35130 | 21.330 | 361 | 271 | 6 | 1 | 360 | 146 | 494 | 7.43e-15 | 78.2 |
| MS.gene88951.t1 | AT1G63400 | 21.892 | 370 | 264 | 10 | 1 | 365 | 181 | 530 | 7.60e-15 | 78.2 |
| MS.gene88951.t1 | AT5G64320 | 21.884 | 329 | 238 | 8 | 25 | 351 | 302 | 613 | 1.51e-14 | 77.4 |
| MS.gene88951.t1 | AT1G09680 | 24.088 | 274 | 196 | 4 | 1 | 274 | 301 | 562 | 1.76e-14 | 77.0 |
| MS.gene88951.t1 | AT1G09680 | 21.131 | 336 | 246 | 7 | 22 | 356 | 252 | 569 | 2.28e-12 | 70.5 |
| MS.gene88951.t1 | AT5G04810 | 21.448 | 359 | 263 | 8 | 7 | 363 | 309 | 650 | 5.90e-14 | 75.9 |
| MS.gene88951.t1 | AT5G04810 | 21.448 | 359 | 263 | 8 | 7 | 363 | 309 | 650 | 7.03e-14 | 75.5 |
| MS.gene88951.t1 | AT1G63130 | 22.714 | 339 | 237 | 10 | 32 | 365 | 208 | 526 | 1.04e-13 | 74.7 |
| MS.gene88951.t1 | AT1G63130 | 22.714 | 339 | 237 | 10 | 32 | 365 | 208 | 526 | 1.04e-13 | 74.7 |
| MS.gene88951.t1 | AT2G17140 | 23.333 | 360 | 250 | 11 | 22 | 372 | 124 | 466 | 1.10e-13 | 75.1 |
| MS.gene88951.t1 | AT2G17140 | 22.552 | 337 | 247 | 7 | 30 | 363 | 167 | 492 | 4.53e-13 | 72.8 |
| MS.gene88951.t1 | AT2G17140 | 23.333 | 360 | 250 | 11 | 22 | 372 | 124 | 466 | 1.10e-13 | 75.1 |
| MS.gene88951.t1 | AT2G17140 | 22.552 | 337 | 247 | 7 | 30 | 363 | 167 | 492 | 4.53e-13 | 72.8 |
| MS.gene88951.t1 | AT4G20090 | 22.156 | 334 | 243 | 6 | 16 | 345 | 263 | 583 | 1.15e-13 | 74.7 |
| MS.gene88951.t1 | AT4G20090 | 22.156 | 334 | 243 | 6 | 16 | 345 | 263 | 583 | 1.15e-13 | 74.7 |
| MS.gene88951.t1 | AT1G09900 | 22.609 | 345 | 247 | 7 | 20 | 363 | 150 | 475 | 1.16e-13 | 74.3 |
| MS.gene88951.t1 | AT1G31840 | 22.812 | 320 | 228 | 8 | 64 | 378 | 512 | 817 | 1.28e-13 | 74.7 |
| MS.gene88951.t1 | AT2G35130 | 21.154 | 364 | 271 | 7 | 1 | 360 | 168 | 519 | 1.49e-13 | 74.3 |
| MS.gene88951.t1 | AT2G35130 | 21.154 | 364 | 271 | 7 | 1 | 360 | 146 | 497 | 1.82e-13 | 73.9 |
| MS.gene88951.t1 | AT3G16710 | 22.078 | 308 | 214 | 9 | 64 | 364 | 169 | 457 | 1.90e-13 | 73.6 |
| MS.gene88951.t1 | AT1G20300 | 23.138 | 376 | 265 | 11 | 16 | 386 | 157 | 513 | 5.63e-13 | 72.0 |
| MS.gene88951.t1 | AT3G48810 | 26.119 | 268 | 170 | 9 | 107 | 363 | 128 | 378 | 5.72e-13 | 72.4 |
| MS.gene88951.t1 | AT5G02860 | 23.028 | 317 | 230 | 7 | 32 | 347 | 476 | 779 | 6.46e-13 | 72.4 |
| MS.gene88951.t1 | AT5G02860 | 23.028 | 317 | 230 | 7 | 32 | 347 | 476 | 779 | 6.46e-13 | 72.4 |
| MS.gene88951.t1 | AT5G02860 | 23.028 | 317 | 230 | 7 | 32 | 347 | 476 | 779 | 6.46e-13 | 72.4 |
| MS.gene88951.t1 | AT5G02860 | 23.028 | 317 | 230 | 7 | 32 | 347 | 476 | 779 | 6.46e-13 | 72.4 |
| MS.gene88951.t1 | AT5G02860 | 23.028 | 317 | 230 | 7 | 32 | 347 | 476 | 779 | 6.46e-13 | 72.4 |
| MS.gene88951.t1 | AT3G18110 | 23.301 | 309 | 225 | 5 | 25 | 331 | 240 | 538 | 7.62e-13 | 72.4 |
| MS.gene88951.t1 | AT5G55840 | 22.905 | 358 | 248 | 9 | 16 | 365 | 344 | 681 | 9.13e-13 | 72.0 |
| MS.gene88951.t1 | AT5G55840 | 22.905 | 358 | 248 | 9 | 16 | 365 | 344 | 681 | 9.13e-13 | 72.0 |
| MS.gene88951.t1 | AT5G55840 | 23.077 | 351 | 242 | 9 | 23 | 365 | 311 | 641 | 1.10e-12 | 72.0 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.73e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.15e-11 | 68.6 |
| MS.gene88951.t1 | AT1G62590 | 21.892 | 370 | 264 | 10 | 1 | 365 | 181 | 530 | 1.73e-12 | 70.9 |
| MS.gene88951.t1 | AT1G62590 | 21.892 | 370 | 264 | 10 | 1 | 365 | 181 | 530 | 1.73e-12 | 70.9 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G06710 | 23.200 | 375 | 214 | 9 | 13 | 363 | 341 | 665 | 1.76e-12 | 71.2 |
| MS.gene88951.t1 | AT1G06710 | 22.287 | 341 | 233 | 10 | 25 | 347 | 463 | 789 | 1.09e-11 | 68.6 |
| MS.gene88951.t1 | AT1G13040 | 22.414 | 348 | 255 | 8 | 18 | 363 | 122 | 456 | 2.15e-12 | 70.1 |
| MS.gene88951.t1 | AT1G13040 | 22.414 | 348 | 255 | 8 | 18 | 363 | 122 | 456 | 2.15e-12 | 70.1 |
| MS.gene88951.t1 | AT3G54980 | 23.100 | 329 | 233 | 9 | 42 | 366 | 301 | 613 | 2.47e-12 | 70.5 |
| MS.gene88951.t1 | AT3G54980 | 23.100 | 329 | 233 | 9 | 42 | 366 | 301 | 613 | 2.47e-12 | 70.5 |
| MS.gene88951.t1 | AT5G41170 | 21.726 | 336 | 244 | 8 | 40 | 371 | 37 | 357 | 3.60e-12 | 69.3 |
| MS.gene88951.t1 | AT5G41170 | 21.726 | 336 | 244 | 8 | 40 | 371 | 137 | 457 | 4.17e-12 | 69.3 |
| MS.gene88951.t1 | AT1G63330 | 21.622 | 370 | 265 | 10 | 1 | 365 | 106 | 455 | 4.98e-12 | 69.3 |
| MS.gene88951.t1 | AT1G63330 | 21.622 | 370 | 265 | 10 | 1 | 365 | 106 | 455 | 4.98e-12 | 69.3 |
| MS.gene88951.t1 | AT1G63330 | 21.622 | 370 | 265 | 10 | 1 | 365 | 106 | 455 | 4.98e-12 | 69.3 |
| MS.gene88951.t1 | AT5G41170 | 21.726 | 336 | 244 | 8 | 40 | 371 | 137 | 457 | 5.03e-12 | 68.9 |
| MS.gene88951.t1 | AT1G12775 | 21.587 | 315 | 228 | 6 | 62 | 371 | 277 | 577 | 5.05e-12 | 69.3 |
| MS.gene88951.t1 | AT1G12620 | 20.195 | 307 | 226 | 6 | 62 | 363 | 261 | 553 | 5.74e-12 | 69.3 |
| MS.gene88951.t1 | AT2G31400 | 22.910 | 323 | 236 | 7 | 12 | 333 | 235 | 545 | 9.22e-12 | 68.9 |
| MS.gene88951.t1 | AT2G31400 | 22.910 | 323 | 236 | 7 | 12 | 333 | 235 | 545 | 1.03e-11 | 68.6 |
| MS.gene88951.t1 | AT4G39620 | 22.408 | 299 | 217 | 7 | 68 | 360 | 117 | 406 | 1.29e-11 | 67.8 |
| MS.gene88951.t1 | AT3G16710 | 21.379 | 290 | 205 | 8 | 64 | 346 | 169 | 442 | 1.33e-11 | 67.4 |
| MS.gene88951.t1 | AT5G01110 | 22.419 | 339 | 243 | 8 | 22 | 356 | 317 | 639 | 1.57e-11 | 67.8 |
| MS.gene88951.t1 | AT4G19440 | 22.316 | 354 | 257 | 7 | 11 | 361 | 484 | 822 | 1.73e-11 | 67.8 |
| MS.gene88951.t1 | AT4G19440 | 22.316 | 354 | 257 | 7 | 11 | 361 | 484 | 822 | 1.73e-11 | 67.8 |
| MS.gene88951.t1 | AT4G19440 | 22.316 | 354 | 257 | 7 | 11 | 361 | 484 | 822 | 1.73e-11 | 67.8 |
| MS.gene88951.t1 | AT4G19440 | 22.316 | 354 | 257 | 7 | 11 | 361 | 484 | 822 | 1.73e-11 | 67.8 |
| MS.gene88951.t1 | AT3G53700 | 21.471 | 340 | 240 | 7 | 32 | 363 | 211 | 531 | 1.89e-11 | 67.8 |
| MS.gene88951.t1 | AT5G01110 | 22.419 | 339 | 243 | 8 | 22 | 356 | 345 | 667 | 1.94e-11 | 67.8 |
| MS.gene88951.t1 | AT4G39620 | 22.408 | 299 | 217 | 7 | 68 | 360 | 117 | 406 | 2.11e-11 | 67.4 |
| MS.gene88951.t1 | AT4G31850 | 23.099 | 355 | 253 | 8 | 1 | 351 | 319 | 657 | 2.87e-11 | 67.4 |
| MS.gene88951.t1 | AT2G15630 | 21.914 | 324 | 226 | 6 | 28 | 343 | 310 | 614 | 3.08e-11 | 66.6 |
| MS.gene88951.t1 | AT1G66345 | 20.120 | 333 | 252 | 6 | 32 | 363 | 221 | 540 | 3.79e-11 | 66.2 |
| MS.gene88951.t1 | AT3G22470 | 21.842 | 380 | 265 | 11 | 1 | 365 | 128 | 490 | 3.87e-11 | 66.6 |
| MS.gene88951.t1 | AT1G62670 | 20.317 | 379 | 245 | 11 | 25 | 363 | 201 | 562 | 6.03e-11 | 65.9 |
| MS.gene88951.t1 | AT1G62670 | 20.317 | 379 | 245 | 11 | 25 | 363 | 201 | 562 | 6.03e-11 | 65.9 |
| MS.gene88951.t1 | AT1G62914 | 21.229 | 358 | 256 | 10 | 1 | 351 | 174 | 512 | 6.67e-11 | 65.5 |
| MS.gene88951.t1 | AT2G18940 | 21.212 | 297 | 183 | 6 | 20 | 313 | 185 | 433 | 6.88e-11 | 65.9 |
| MS.gene88951.t1 | AT1G62680 | 21.498 | 307 | 219 | 9 | 64 | 365 | 171 | 460 | 7.86e-11 | 65.5 |
| MS.gene88951.t1 | AT1G62680 | 21.498 | 307 | 219 | 9 | 64 | 365 | 171 | 460 | 7.86e-11 | 65.5 |
Find 138 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATTTCATACTTATTT+TGG | 0.134963 | 1.3:+249237 | None:intergenic |
| GGTATTCTGGATTGGTATTC+TGG | 0.195897 | 1.3:-248670 | MS.gene88951:CDS |
| ATATTTATGGTGGCCTAATT+TGG | 0.196709 | 1.3:-249952 | MS.gene88951:CDS |
| TACAACTTGGTTCTGGAAAT+TGG | 0.196797 | 1.3:-248640 | MS.gene88951:CDS |
| ACCATTGCAAGCTCTCATTT+TGG | 0.235787 | 1.3:-248918 | MS.gene88951:CDS |
| AGAGAAATGAAGTTGAAATT+AGG | 0.236285 | 1.3:-249668 | MS.gene88951:CDS |
| TGAAATTGATGCCCCATTAA+TGG | 0.248077 | 1.3:-249225 | MS.gene88951:CDS |
| TTCTATTCTTTCTTTGTCTA+TGG | 0.251309 | 1.3:+249910 | None:intergenic |
| TATGGAATCACATGATAAAT+TGG | 0.256096 | 1.3:-249492 | MS.gene88951:CDS |
| CATGATTGATTCTGCAAATT+CGG | 0.273446 | 1.3:+249586 | None:intergenic |
| ACTAAACATGTACTTCAATA+TGG | 0.284965 | 1.3:-249510 | MS.gene88951:CDS |
| CACCTTGTGTTCTTGCATAC+TGG | 0.289141 | 1.3:-248827 | MS.gene88951:CDS |
| GATAGCTATGCAGCCAAATT+AGG | 0.290210 | 1.3:+249939 | None:intergenic |
| TAGTATATATTTAGATTCTT+TGG | 0.296485 | 1.3:-249417 | MS.gene88951:CDS |
| GCTTTCAAACTGCAAAAGTT+TGG | 0.303946 | 1.3:+249772 | None:intergenic |
| TTCTTCTGTTCAAGGTTGTT+TGG | 0.305268 | 1.3:-250158 | MS.gene88951:CDS |
| AACCACCTATGAACAAGTTT+TGG | 0.306684 | 1.3:+248852 | None:intergenic |
| CTTACATCTTCAAGAATATA+TGG | 0.308293 | 1.3:+248612 | None:intergenic |
| ATACTATATATAACACTATT+AGG | 0.314376 | 1.3:+249434 | None:intergenic |
| AATTTGGCTGCATAGCTATC+AGG | 0.319175 | 1.3:-249936 | MS.gene88951:CDS |
| TACCTTAGTTCTTCTGTTCA+AGG | 0.335736 | 1.3:-250166 | MS.gene88951:CDS |
| TCCCTTGACTTTACAATCAA+TGG | 0.337999 | 1.3:+248701 | None:intergenic |
| TCTGTTCTTTATTTAACTTC+AGG | 0.342578 | 1.3:+249147 | None:intergenic |
| AGGGAAAGGGAAAGGTATTC+TGG | 0.343457 | 1.3:-248683 | MS.gene88951:CDS |
| ATATTCAGGAAATCACTTAA+AGG | 0.349756 | 1.3:-249285 | MS.gene88951:CDS |
| TGAGGGCCTGCGCAAGGGAG+GGG | 0.351418 | 1.3:-249823 | MS.gene88951:CDS |
| GGTAAGCCACAATCAATATA+TGG | 0.352346 | 1.3:+250185 | None:intergenic |
| GAGGGCCTGCGCAAGGGAGG+GGG | 0.359066 | 1.3:-249822 | MS.gene88951:CDS |
| TTAAGTGATTTCCTGAATAT+AGG | 0.360058 | 1.3:+249288 | None:intergenic |
| ATACTGATTGGGATGCTTCT+AGG | 0.366598 | 1.3:-249119 | MS.gene88951:CDS |
| GCAATGGTGCAAAACTTATC+TGG | 0.373004 | 1.3:+248933 | None:intergenic |
| CAATTCCAAAACTTGTTCAT+AGG | 0.373747 | 1.3:-248857 | MS.gene88951:CDS |
| TTATTTAACTTCAGGCTCAT+TGG | 0.384361 | 1.3:+249155 | None:intergenic |
| GGAATTGTAGGTTGACCATT+TGG | 0.387144 | 1.3:+248873 | None:intergenic |
| TTACATGGATACCTATATTC+AGG | 0.393280 | 1.3:-249299 | MS.gene88951:CDS |
| TTAGATTCTTTGGTGAAAGT+TGG | 0.397946 | 1.3:-249407 | MS.gene88951:CDS |
| GAAGCAATACAACTTGGTTC+TGG | 0.398600 | 1.3:-248647 | MS.gene88951:CDS |
| AATAAACATATGATGGTGTA+AGG | 0.401918 | 1.3:+249534 | None:intergenic |
| AATTTCCATCAAAATTGAAA+TGG | 0.402162 | 1.3:+249051 | None:intergenic |
| ATTCCACCGAATGATTCAAT+TGG | 0.404834 | 1.3:-250119 | MS.gene88951:CDS |
| TGAGTTTATATATCATCGTT+TGG | 0.412181 | 1.3:-250002 | MS.gene88951:CDS |
| GAACAGAGAGAAATACTGAT+TGG | 0.415232 | 1.3:-249131 | MS.gene88951:CDS |
| CTTGAGGGCCTGCGCAAGGG+AGG | 0.416299 | 1.3:-249825 | MS.gene88951:CDS |
| CAAAATGGAAGTCCACTCTA+AGG | 0.416614 | 1.3:-249723 | MS.gene88951:CDS |
| ATATAAACTCAGCTTGCTTA+AGG | 0.416737 | 1.3:+250014 | None:intergenic |
| AATATCTCCAAGGACTTCAT+AGG | 0.423483 | 1.3:+249692 | None:intergenic |
| TAAGGGAAGTCGTGAGGGTG+TGG | 0.438002 | 1.3:-248754 | MS.gene88951:CDS |
| TTTGATGATATTATCAATCA+AGG | 0.443335 | 1.3:-250232 | MS.gene88951:CDS |
| TATATGGAACGTGGACTCGC+TGG | 0.444107 | 1.3:+250201 | None:intergenic |
| TATCATCGTTTGGTTACAAA+TGG | 0.445733 | 1.3:-249992 | MS.gene88951:CDS |
| GTATTCTGGATTGGTATTCT+GGG | 0.446524 | 1.3:-248669 | MS.gene88951:CDS |
| TAAGATGATGTTACATGATC+GGG | 0.446858 | 1.3:+249319 | None:intergenic |
| GATGTAGCCACTCATAAAAC+TGG | 0.455806 | 1.3:+248991 | None:intergenic |
| TGGAGGAAGCAGAGAAAACT+TGG | 0.461017 | 1.3:-249796 | MS.gene88951:CDS |
| GATGTGCATAAAGATATTTA+TGG | 0.465782 | 1.3:-249965 | MS.gene88951:CDS |
| TACTTGCATCACGAAACATT+TGG | 0.467025 | 1.3:+249354 | None:intergenic |
| GGAGGGCATCGAAATTCATC+GGG | 0.486854 | 1.3:-248795 | MS.gene88951:CDS |
| TGTACACAAAAGCCTGTGAT+GGG | 0.487794 | 1.3:+249744 | None:intergenic |
| AACAGAGAGAAATACTGATT+GGG | 0.489307 | 1.3:-249130 | MS.gene88951:CDS |
| ATCCACCCAATTGAATCATT+CGG | 0.490712 | 1.3:+250113 | None:intergenic |
| GTTGGTAAAATTGACAAGGC+TGG | 0.491220 | 1.3:-249389 | MS.gene88951:CDS |
| TTCCACCGAATGATTCAATT+GGG | 0.494453 | 1.3:-250118 | MS.gene88951:CDS |
| TACTGCTTTGAAAAGTTCCC+TGG | 0.496818 | 1.3:+250037 | None:intergenic |
| TTTAGTAAATAAACATATGA+TGG | 0.501648 | 1.3:+249527 | None:intergenic |
| GTCCATTGATTGTAAAGTCA+AGG | 0.503337 | 1.3:-248703 | MS.gene88951:CDS |
| TACTAGGCTAGCAGATTACA+TGG | 0.508890 | 1.3:-250290 | MS.gene88951:CDS |
| CGATCTTGAGGGCCTGCGCA+AGG | 0.509240 | 1.3:-249829 | MS.gene88951:CDS |
| CTTGCATACTGGTACATGTA+TGG | 0.514271 | 1.3:-248816 | MS.gene88951:CDS |
| TGATGCAACGCAGTTGGTAT+CGG | 0.517096 | 1.3:-250330 | MS.gene88951:CDS |
| TTGAGGGCCTGCGCAAGGGA+GGG | 0.517464 | 1.3:-249824 | MS.gene88951:CDS |
| AACCTTGAACAGAAGAACTA+AGG | 0.520036 | 1.3:+250164 | None:intergenic |
| GATTGTAAAGTCAAGGGAAA+GGG | 0.520477 | 1.3:-248696 | MS.gene88951:CDS |
| CACGTTCCATATATTGATTG+TGG | 0.521967 | 1.3:-250191 | MS.gene88951:CDS |
| TTGTACACAAAAGCCTGTGA+TGG | 0.523890 | 1.3:+249743 | None:intergenic |
| AGGTGTGAATATAATGAGAC+AGG | 0.525973 | 1.3:-248574 | MS.gene88951:CDS |
| GATCTTGAGGGCCTGCGCAA+GGG | 0.528756 | 1.3:-249828 | MS.gene88951:CDS |
| GTAAGATGATGTTACATGAT+CGG | 0.529110 | 1.3:+249318 | None:intergenic |
| TCATGTAACATCATCTTACA+TGG | 0.535360 | 1.3:-249314 | MS.gene88951:CDS |
| TGGAGGGCATCGAAATTCAT+CGG | 0.541168 | 1.3:-248796 | MS.gene88951:CDS |
| AAATATCTTTATGCACATCA+AGG | 0.541678 | 1.3:+249969 | None:intergenic |
| AAGGGAAAGGTATTCTGGAT+TGG | 0.541846 | 1.3:-248678 | MS.gene88951:CDS |
| GTAAGAGATTTCACTAAGGC+AGG | 0.542553 | 1.3:-248594 | MS.gene88951:CDS |
| TGGTATGCCTATGAAGTCCT+TGG | 0.542710 | 1.3:-249699 | MS.gene88951:CDS |
| CGCTTATAAGAGCTTTGAAG+AGG | 0.543004 | 1.3:+250062 | None:intergenic |
| ACCATTTGGCCAAAACTGAT+CGG | 0.544895 | 1.3:+248887 | None:intergenic |
| TCACCACTTGGCTTAGAAGT+AGG | 0.546193 | 1.3:+248969 | None:intergenic |
| AGGTGCTAGTATCGATCTTG+AGG | 0.547318 | 1.3:-249841 | MS.gene88951:CDS |
| ATGTTCTTACTGTCACCACT+TGG | 0.551541 | 1.3:+248957 | None:intergenic |
| GACTTTACAATCAATGGACA+TGG | 0.551655 | 1.3:+248707 | None:intergenic |
| ATCACATGATAAATTGGAAG+AGG | 0.554760 | 1.3:-249486 | MS.gene88951:CDS |
| GGTGCTAGTATCGATCTTGA+GGG | 0.554891 | 1.3:-249840 | MS.gene88951:CDS |
| ATATGGAACGTGGACTCGCT+GGG | 0.555396 | 1.3:+250202 | None:intergenic |
| CACCGAATGATTCAATTGGG+TGG | 0.555489 | 1.3:-250115 | MS.gene88951:CDS |
| TTCTGGGAAGCAATACAACT+TGG | 0.555919 | 1.3:-248653 | MS.gene88951:CDS |
| TTCCAAAACTTGTTCATAGG+TGG | 0.558137 | 1.3:-248854 | MS.gene88951:CDS |
| TCCATTGATTGTAAAGTCAA+GGG | 0.563781 | 1.3:-248702 | MS.gene88951:CDS |
| TAAACATATGATGGTGTAAG+GGG | 0.566401 | 1.3:+249536 | None:intergenic |
| TACACAAAAGCCTGTGATGG+GGG | 0.572867 | 1.3:+249746 | None:intergenic |
| TAAAGTCAAGGGAAAGGGAA+AGG | 0.573314 | 1.3:-248691 | MS.gene88951:CDS |
| ATGGAAGTCCACTCTAAGGT+TGG | 0.573408 | 1.3:-249719 | MS.gene88951:CDS |
| ACGTGGACTCGCTGGGAACA+CGG | 0.577330 | 1.3:+250209 | None:intergenic |
| ATAAACATATGATGGTGTAA+GGG | 0.580524 | 1.3:+249535 | None:intergenic |
| AATACATCCTGAGTTTGAGA+AGG | 0.581619 | 1.3:-249193 | MS.gene88951:CDS |
| AAAGCTCTTATAAGCGAACC+AGG | 0.587841 | 1.3:-250055 | MS.gene88951:CDS |
| GCCAAAATGAGAGCTTGCAA+TGG | 0.588265 | 1.3:+248917 | None:intergenic |
| ATGTTTCGTGATGCAAGTAT+TGG | 0.589456 | 1.3:-249350 | MS.gene88951:CDS |
| AATGGATGATGCAACGCAGT+TGG | 0.589865 | 1.3:-250336 | None:intergenic |
| TATATATAACACTATTAGGA+TGG | 0.591675 | 1.3:+249438 | None:intergenic |
| TGATTGTAAAGTCAAGGGAA+AGG | 0.594051 | 1.3:-248697 | MS.gene88951:CDS |
| TATGCAAGCTAAGACGCGGC+TGG | 0.601478 | 1.3:+250089 | None:intergenic |
| GCATACTGGTACATGTATGG+AGG | 0.605806 | 1.3:-248813 | MS.gene88951:CDS |
| AAGAAAGAATAGAAGCATTG+AGG | 0.611980 | 1.3:-249901 | MS.gene88951:CDS |
| CATTTCTCTAAATATCTCCA+AGG | 0.612521 | 1.3:+249682 | None:intergenic |
| AAGATTAAGGGAAGTCGTGA+GGG | 0.613821 | 1.3:-248759 | MS.gene88951:CDS |
| GTACACAAAAGCCTGTGATG+GGG | 0.621853 | 1.3:+249745 | None:intergenic |
| CACCCAATTGAATCATTCGG+TGG | 0.622335 | 1.3:+250116 | None:intergenic |
| GAAGATTAAGGGAAGTCGTG+AGG | 0.622880 | 1.3:-248760 | MS.gene88951:CDS |
| TATTAGGATGGCATTTCTCG+AGG | 0.625254 | 1.3:+249450 | None:intergenic |
| GCTTATAAGAGCTTTGAAGA+GGG | 0.626136 | 1.3:+250063 | None:intergenic |
| AGGCAAGAGATGCTACGCGC+TGG | 0.626231 | 1.3:-249881 | MS.gene88951:CDS |
| CATACTGGTACATGTATGGA+GGG | 0.627303 | 1.3:-248812 | MS.gene88951:CDS |
| TAATATCATCAAATACCTCA+CGG | 0.632598 | 1.3:+250242 | None:intergenic |
| TAGGCATACCAACCTTAGAG+TGG | 0.638621 | 1.3:+249711 | None:intergenic |
| AGATGTAAGAGATTTCACTA+AGG | 0.650087 | 1.3:-248598 | MS.gene88951:CDS |
| TACCAGTATGCAAGAACACA+AGG | 0.651343 | 1.3:+248825 | None:intergenic |
| CTGATTGGGATGCTTCTAGG+TGG | 0.655228 | 1.3:-249116 | MS.gene88951:CDS |
| CACAATCAATATATGGAACG+TGG | 0.669238 | 1.3:+250192 | None:intergenic |
| TGGTATTGATGAAAATCAAG+AGG | 0.669406 | 1.3:-249861 | MS.gene88951:CDS |
| CATCCTACTTCTAAGCCAAG+TGG | 0.677886 | 1.3:-248972 | MS.gene88951:CDS |
| GTGCATAAAGATATTTATGG+TGG | 0.703198 | 1.3:-249962 | MS.gene88951:CDS |
| GAATTATGCAAGCTAAGACG+CGG | 0.705558 | 1.3:+250085 | None:intergenic |
| ACTAGGCTAGCAGATTACAT+GGG | 0.706145 | 1.3:-250289 | MS.gene88951:CDS |
| CAAGTTTACAAAGTGCCGTG+AGG | 0.713955 | 1.3:-250257 | MS.gene88951:CDS |
| GAGGGCATCGAAATTCATCG+GGG | 0.720882 | 1.3:-248794 | MS.gene88951:CDS |
| AAGCTCTTATAAGCGAACCA+GGG | 0.725063 | 1.3:-250054 | MS.gene88951:CDS |
| AGGGCATCGAAATTCATCGG+GGG | 0.752383 | 1.3:-248793 | MS.gene88951:CDS |
| GAAAGTTGGTAAAATTGACA+AGG | 0.752517 | 1.3:-249393 | MS.gene88951:CDS |
| ACACAAAAGCCTGTGATGGG+GGG | 0.758936 | 1.3:+249747 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTATATATAACACTATT+AGG | + | chr1.3:249421-249440 | None:intergenic | 15.0% |
| !! | TAGTATATATTTAGATTCTT+TGG | - | chr1.3:249435-249454 | MS.gene88951:CDS | 15.0% |
| !! | TTTAGTAAATAAACATATGA+TGG | + | chr1.3:249328-249347 | None:intergenic | 15.0% |
| !! | AATTTCCATCAAAATTGAAA+TGG | + | chr1.3:249804-249823 | None:intergenic | 20.0% |
| !! | TATATATAACACTATTAGGA+TGG | + | chr1.3:249417-249436 | None:intergenic | 20.0% |
| !!! | ATTATCCATTTCAATTTTGA+TGG | - | chr1.3:249796-249815 | MS.gene88951:CDS | 20.0% |
| !!! | ATTCAAGTTTTTCCATTAAT+GGG | + | chr1.3:249642-249661 | None:intergenic | 20.0% |
| !!! | CATCAATTTCATACTTATTT+TGG | + | chr1.3:249618-249637 | None:intergenic | 20.0% |
| !!! | TATTCAAGTTTTTCCATTAA+TGG | + | chr1.3:249643-249662 | None:intergenic | 20.0% |
| !!! | TTTGATGATATTATCAATCA+AGG | - | chr1.3:248620-248639 | MS.gene88951:CDS | 20.0% |
| ! | AAATATCTTTATGCACATCA+AGG | + | chr1.3:248886-248905 | None:intergenic | 25.0% |
| ! | ACTAAACATGTACTTCAATA+TGG | - | chr1.3:249342-249361 | MS.gene88951:CDS | 25.0% |
| ! | AGAGAAATGAAGTTGAAATT+AGG | - | chr1.3:249184-249203 | MS.gene88951:CDS | 25.0% |
| ! | ATATTCAGGAAATCACTTAA+AGG | - | chr1.3:249567-249586 | MS.gene88951:CDS | 25.0% |
| ! | CTTACATCTTCAAGAATATA+TGG | + | chr1.3:250243-250262 | None:intergenic | 25.0% |
| ! | GATGTGCATAAAGATATTTA+TGG | - | chr1.3:248887-248906 | MS.gene88951:CDS | 25.0% |
| ! | TAATATCATCAAATACCTCA+CGG | + | chr1.3:248613-248632 | None:intergenic | 25.0% |
| ! | TATGGAATCACATGATAAAT+TGG | - | chr1.3:249360-249379 | MS.gene88951:CDS | 25.0% |
| ! | TGAGTTTATATATCATCGTT+TGG | - | chr1.3:248850-248869 | MS.gene88951:CDS | 25.0% |
| ! | TTAAGTGATTTCCTGAATAT+AGG | + | chr1.3:249567-249586 | None:intergenic | 25.0% |
| ! | TTCTATTCTTTCTTTGTCTA+TGG | + | chr1.3:248945-248964 | None:intergenic | 25.0% |
| !! | AATAAACATATGATGGTGTA+AGG | + | chr1.3:249321-249340 | None:intergenic | 25.0% |
| !! | ATAAACATATGATGGTGTAA+GGG | + | chr1.3:249320-249339 | None:intergenic | 25.0% |
| !! | TCTGTTCTTTATTTAACTTC+AGG | + | chr1.3:249708-249727 | None:intergenic | 25.0% |
| !!! | TTCAAGTTTTTCCATTAATG+GGG | + | chr1.3:249641-249660 | None:intergenic | 25.0% |
| AGATGTAAGAGATTTCACTA+AGG | - | chr1.3:250254-250273 | MS.gene88951:CDS | 30.0% | |
| ATATTTATGGTGGCCTAATT+TGG | - | chr1.3:248900-248919 | MS.gene88951:CDS | 30.0% | |
| ATCACATGATAAATTGGAAG+AGG | - | chr1.3:249366-249385 | MS.gene88951:CDS | 30.0% | |
| CATTTCTCTAAATATCTCCA+AGG | + | chr1.3:249173-249192 | None:intergenic | 30.0% | |
| GTAAGATGATGTTACATGAT+CGG | + | chr1.3:249537-249556 | None:intergenic | 30.0% | |
| GTGCATAAAGATATTTATGG+TGG | - | chr1.3:248890-248909 | MS.gene88951:CDS | 30.0% | |
| TAAGATGATGTTACATGATC+GGG | + | chr1.3:249536-249555 | None:intergenic | 30.0% | |
| TATCATCGTTTGGTTACAAA+TGG | - | chr1.3:248860-248879 | MS.gene88951:CDS | 30.0% | |
| TCATGTAACATCATCTTACA+TGG | - | chr1.3:249538-249557 | MS.gene88951:CDS | 30.0% | |
| TTACATGGATACCTATATTC+AGG | - | chr1.3:249553-249572 | MS.gene88951:CDS | 30.0% | |
| TTAGATTCTTTGGTGAAAGT+TGG | - | chr1.3:249445-249464 | MS.gene88951:CDS | 30.0% | |
| ! | AACAGAGAGAAATACTGATT+GGG | - | chr1.3:249722-249741 | MS.gene88951:CDS | 30.0% |
| ! | ATATAAACTCAGCTTGCTTA+AGG | + | chr1.3:248841-248860 | None:intergenic | 30.0% |
| ! | CAATTCCAAAACTTGTTCAT+AGG | - | chr1.3:249995-250014 | MS.gene88951:CDS | 30.0% |
| ! | CATGATTGATTCTGCAAATT+CGG | + | chr1.3:249269-249288 | None:intergenic | 30.0% |
| ! | GATGTTTTGCTGAAGATTAA+GGG | - | chr1.3:250081-250100 | MS.gene88951:CDS | 30.0% |
| ! | TAAACATATGATGGTGTAAG+GGG | + | chr1.3:249319-249338 | None:intergenic | 30.0% |
| ! | TAATTTTCCTTCTCAAACTC+AGG | + | chr1.3:249669-249688 | None:intergenic | 30.0% |
| ! | TCCATTGATTGTAAAGTCAA+GGG | - | chr1.3:250150-250169 | MS.gene88951:CDS | 30.0% |
| ! | TTATTTAACTTCAGGCTCAT+TGG | + | chr1.3:249700-249719 | None:intergenic | 30.0% |
| ! | TTGATTTTGCTCTTTCTACT+AGG | - | chr1.3:248546-248565 | MS.gene88951:CDS | 30.0% |
| !! | AAGAAAGAATAGAAGCATTG+AGG | - | chr1.3:248951-248970 | MS.gene88951:CDS | 30.0% |
| !! | GAAAGTTGGTAAAATTGACA+AGG | - | chr1.3:249459-249478 | MS.gene88951:CDS | 30.0% |
| !! | TGGTATTGATGAAAATCAAG+AGG | - | chr1.3:248991-249010 | MS.gene88951:CDS | 30.0% |
| !!! | TGAACAAGTTTTGGAATTGT+AGG | + | chr1.3:249994-250013 | None:intergenic | 30.0% |
| AACCTTGAACAGAAGAACTA+AGG | + | chr1.3:248691-248710 | None:intergenic | 35.0% | |
| AATACATCCTGAGTTTGAGA+AGG | - | chr1.3:249659-249678 | MS.gene88951:CDS | 35.0% | |
| AATATCTCCAAGGACTTCAT+AGG | + | chr1.3:249163-249182 | None:intergenic | 35.0% | |
| AGGTGTGAATATAATGAGAC+AGG | - | chr1.3:250278-250297 | MS.gene88951:CDS | 35.0% | |
| ATCCACCCAATTGAATCATT+CGG | + | chr1.3:248742-248761 | None:intergenic | 35.0% | |
| ATGTTTCGTGATGCAAGTAT+TGG | - | chr1.3:249502-249521 | MS.gene88951:CDS | 35.0% | |
| ATTCCACCGAATGATTCAAT+TGG | - | chr1.3:248733-248752 | MS.gene88951:CDS | 35.0% | |
| CACAATCAATATATGGAACG+TGG | + | chr1.3:248663-248682 | None:intergenic | 35.0% | |
| GAACAGAGAGAAATACTGAT+TGG | - | chr1.3:249721-249740 | MS.gene88951:CDS | 35.0% | |
| GACTTTACAATCAATGGACA+TGG | + | chr1.3:250148-250167 | None:intergenic | 35.0% | |
| GATTGTAAAGTCAAGGGAAA+GGG | - | chr1.3:250156-250175 | MS.gene88951:CDS | 35.0% | |
| GCTTTCAAACTGCAAAAGTT+TGG | + | chr1.3:249083-249102 | None:intergenic | 35.0% | |
| GGTAAGCCACAATCAATATA+TGG | + | chr1.3:248670-248689 | None:intergenic | 35.0% | |
| TACTTGCATCACGAAACATT+TGG | + | chr1.3:249501-249520 | None:intergenic | 35.0% | |
| TCCCTTGACTTTACAATCAA+TGG | + | chr1.3:250154-250173 | None:intergenic | 35.0% | |
| TGAAATTGATGCCCCATTAA+TGG | - | chr1.3:249627-249646 | MS.gene88951:CDS | 35.0% | |
| TGATTGTAAAGTCAAGGGAA+AGG | - | chr1.3:250155-250174 | MS.gene88951:CDS | 35.0% | |
| TTCCACCGAATGATTCAATT+GGG | - | chr1.3:248734-248753 | MS.gene88951:CDS | 35.0% | |
| TTCTTCTGTTCAAGGTTGTT+TGG | - | chr1.3:248694-248713 | MS.gene88951:CDS | 35.0% | |
| ! | AACCACCTATGAACAAGTTT+TGG | + | chr1.3:250003-250022 | None:intergenic | 35.0% |
| ! | ACAGGCTTTTGTGTACAAAA+TGG | - | chr1.3:249114-249133 | MS.gene88951:CDS | 35.0% |
| ! | ATGACAGATTTTGTCAAGAG+TGG | - | chr1.3:249286-249305 | MS.gene88951:CDS | 35.0% |
| ! | CACGTTCCATATATTGATTG+TGG | - | chr1.3:248661-248680 | MS.gene88951:CDS | 35.0% |
| ! | GGATGTTTTGCTGAAGATTA+AGG | - | chr1.3:250080-250099 | MS.gene88951:CDS | 35.0% |
| ! | GTCCATTGATTGTAAAGTCA+AGG | - | chr1.3:250149-250168 | MS.gene88951:CDS | 35.0% |
| ! | TACCTTAGTTCTTCTGTTCA+AGG | - | chr1.3:248686-248705 | MS.gene88951:CDS | 35.0% |
| ! | TTCCAAAACTTGTTCATAGG+TGG | - | chr1.3:249998-250017 | MS.gene88951:CDS | 35.0% |
| !! | GCTTATAAGAGCTTTGAAGA+GGG | + | chr1.3:248792-248811 | None:intergenic | 35.0% |
| !! | GTATTCTGGATTGGTATTCT+GGG | - | chr1.3:250183-250202 | MS.gene88951:CDS | 35.0% |
| !! | TACAACTTGGTTCTGGAAAT+TGG | - | chr1.3:250212-250231 | MS.gene88951:CDS | 35.0% |
| AAAGCTCTTATAAGCGAACC+AGG | - | chr1.3:248797-248816 | MS.gene88951:CDS | 40.0% | |
| AAGATTAAGGGAAGTCGTGA+GGG | - | chr1.3:250093-250112 | MS.gene88951:CDS | 40.0% | |
| AAGCTCTTATAAGCGAACCA+GGG | - | chr1.3:248798-248817 | MS.gene88951:CDS | 40.0% | |
| AATTTGGCTGCATAGCTATC+AGG | - | chr1.3:248916-248935 | MS.gene88951:CDS | 40.0% | |
| ACCATTTGGCCAAAACTGAT+CGG | + | chr1.3:249968-249987 | None:intergenic | 40.0% | |
| ACTAGGCTAGCAGATTACAT+GGG | - | chr1.3:248563-248582 | MS.gene88951:CDS | 40.0% | |
| ATGTTCTTACTGTCACCACT+TGG | + | chr1.3:249898-249917 | None:intergenic | 40.0% | |
| CAAAATGGAAGTCCACTCTA+AGG | - | chr1.3:249129-249148 | MS.gene88951:CDS | 40.0% | |
| CATACTGGTACATGTATGGA+GGG | - | chr1.3:250040-250059 | MS.gene88951:CDS | 40.0% | |
| CTTGCATACTGGTACATGTA+TGG | - | chr1.3:250036-250055 | MS.gene88951:CDS | 40.0% | |
| GAAGCAATACAACTTGGTTC+TGG | - | chr1.3:250205-250224 | MS.gene88951:CDS | 40.0% | |
| GAATTATGCAAGCTAAGACG+CGG | + | chr1.3:248770-248789 | None:intergenic | 40.0% | |
| GATAGCTATGCAGCCAAATT+AGG | + | chr1.3:248916-248935 | None:intergenic | 40.0% | |
| GATGTAGCCACTCATAAAAC+TGG | + | chr1.3:249864-249883 | None:intergenic | 40.0% | |
| GCAATGGTGCAAAACTTATC+TGG | + | chr1.3:249922-249941 | None:intergenic | 40.0% | |
| GTAAGAGATTTCACTAAGGC+AGG | - | chr1.3:250258-250277 | MS.gene88951:CDS | 40.0% | |
| TAAAGTCAAGGGAAAGGGAA+AGG | - | chr1.3:250161-250180 | MS.gene88951:CDS | 40.0% | |
| TACCAGTATGCAAGAACACA+AGG | + | chr1.3:250030-250049 | None:intergenic | 40.0% | |
| TACTAGGCTAGCAGATTACA+TGG | - | chr1.3:248562-248581 | MS.gene88951:CDS | 40.0% | |
| TATTAGGATGGCATTTCTCG+AGG | + | chr1.3:249405-249424 | None:intergenic | 40.0% | |
| TGTACACAAAAGCCTGTGAT+GGG | + | chr1.3:249111-249130 | None:intergenic | 40.0% | |
| TTGTACACAAAAGCCTGTGA+TGG | + | chr1.3:249112-249131 | None:intergenic | 40.0% | |
| ! | ACCATTGCAAGCTCTCATTT+TGG | - | chr1.3:249934-249953 | MS.gene88951:CDS | 40.0% |
| ! | ATACTGATTGGGATGCTTCT+AGG | - | chr1.3:249733-249752 | MS.gene88951:CDS | 40.0% |
| ! | GCTTTTATGCCGATCAGTTT+TGG | - | chr1.3:249956-249975 | MS.gene88951:CDS | 40.0% |
| ! | GGAATTGTAGGTTGACCATT+TGG | + | chr1.3:249982-250001 | None:intergenic | 40.0% |
| ! | GTTGGTAAAATTGACAAGGC+TGG | - | chr1.3:249463-249482 | MS.gene88951:CDS | 40.0% |
| ! | TTCTGGGAAGCAATACAACT+TGG | - | chr1.3:250199-250218 | MS.gene88951:CDS | 40.0% |
| !! | AAGGGAAAGGTATTCTGGAT+TGG | - | chr1.3:250174-250193 | MS.gene88951:CDS | 40.0% |
| !! | CGCTTATAAGAGCTTTGAAG+AGG | + | chr1.3:248793-248812 | None:intergenic | 40.0% |
| !! | GGTATTCTGGATTGGTATTC+TGG | - | chr1.3:250182-250201 | MS.gene88951:CDS | 40.0% |
| !! | TACATCGCCAGTTTTATGAG+TGG | - | chr1.3:249854-249873 | MS.gene88951:CDS | 40.0% |
| !! | TACTGCTTTGAAAAGTTCCC+TGG | + | chr1.3:248818-248837 | None:intergenic | 40.0% |
| CACCCAATTGAATCATTCGG+TGG | + | chr1.3:248739-248758 | None:intergenic | 45.0% | |
| CACCGAATGATTCAATTGGG+TGG | - | chr1.3:248737-248756 | MS.gene88951:CDS | 45.0% | |
| CACCTTGTGTTCTTGCATAC+TGG | - | chr1.3:250025-250044 | MS.gene88951:CDS | 45.0% | |
| CATCCTACTTCTAAGCCAAG+TGG | - | chr1.3:249880-249899 | MS.gene88951:CDS | 45.0% | |
| GAAGATTAAGGGAAGTCGTG+AGG | - | chr1.3:250092-250111 | MS.gene88951:CDS | 45.0% | |
| GCATACTGGTACATGTATGG+AGG | - | chr1.3:250039-250058 | MS.gene88951:CDS | 45.0% | |
| GCCAAAATGAGAGCTTGCAA+TGG | + | chr1.3:249938-249957 | None:intergenic | 45.0% | |
| GTACACAAAAGCCTGTGATG+GGG | + | chr1.3:249110-249129 | None:intergenic | 45.0% | |
| TACACAAAAGCCTGTGATGG+GGG | + | chr1.3:249109-249128 | None:intergenic | 45.0% | |
| TAGGCATACCAACCTTAGAG+TGG | + | chr1.3:249144-249163 | None:intergenic | 45.0% | |
| TCACCACTTGGCTTAGAAGT+AGG | + | chr1.3:249886-249905 | None:intergenic | 45.0% | |
| TGGAGGAAGCAGAGAAAACT+TGG | - | chr1.3:249056-249075 | MS.gene88951:CDS | 45.0% | |
| TGGTATGCCTATGAAGTCCT+TGG | - | chr1.3:249153-249172 | MS.gene88951:CDS | 45.0% | |
| !! | AGGGAAAGGGAAAGGTATTC+TGG | - | chr1.3:250169-250188 | MS.gene88951:CDS | 45.0% |
| !! | AGGTGCTAGTATCGATCTTG+AGG | - | chr1.3:249011-249030 | MS.gene88951:CDS | 45.0% |
| !! | ATGGAAGTCCACTCTAAGGT+TGG | - | chr1.3:249133-249152 | MS.gene88951:CDS | 45.0% |
| !! | CAAGTTTACAAAGTGCCGTG+AGG | - | chr1.3:248595-248614 | MS.gene88951:CDS | 45.0% |
| !! | GGTGCTAGTATCGATCTTGA+GGG | - | chr1.3:249012-249031 | MS.gene88951:CDS | 45.0% |
| !! | TGGAGGGCATCGAAATTCAT+CGG | - | chr1.3:250056-250075 | MS.gene88951:CDS | 45.0% |
| ATATGGAACGTGGACTCGCT+GGG | + | chr1.3:248653-248672 | None:intergenic | 50.0% | |
| CTGATTGGGATGCTTCTAGG+TGG | - | chr1.3:249736-249755 | MS.gene88951:CDS | 50.0% | |
| TATATGGAACGTGGACTCGC+TGG | + | chr1.3:248654-248673 | None:intergenic | 50.0% | |
| ! | ACACAAAAGCCTGTGATGGG+GGG | + | chr1.3:249108-249127 | None:intergenic | 50.0% |
| !! | AGGGCATCGAAATTCATCGG+GGG | - | chr1.3:250059-250078 | MS.gene88951:CDS | 50.0% |
| !! | GAGGGCATCGAAATTCATCG+GGG | - | chr1.3:250058-250077 | MS.gene88951:CDS | 50.0% |
| !! | GCCGATCAGTTTTGGCCAAA+TGG | - | chr1.3:249964-249983 | MS.gene88951:CDS | 50.0% |
| !! | GGAGGGCATCGAAATTCATC+GGG | - | chr1.3:250057-250076 | MS.gene88951:CDS | 50.0% |
| TAAGGGAAGTCGTGAGGGTG+TGG | - | chr1.3:250098-250117 | MS.gene88951:CDS | 55.0% | |
| TATGCAAGCTAAGACGCGGC+TGG | + | chr1.3:248766-248785 | None:intergenic | 55.0% | |
| TGAAAGCAACCCCCCATCAC+AGG | - | chr1.3:249096-249115 | MS.gene88951:CDS | 55.0% | |
| ACGTGGACTCGCTGGGAACA+CGG | + | chr1.3:248646-248665 | None:intergenic | 60.0% | |
| AGGCAAGAGATGCTACGCGC+TGG | - | chr1.3:248971-248990 | MS.gene88951:CDS | 60.0% | |
| GATCTTGAGGGCCTGCGCAA+GGG | - | chr1.3:249024-249043 | MS.gene88951:CDS | 60.0% | |
| CGATCTTGAGGGCCTGCGCA+AGG | - | chr1.3:249023-249042 | MS.gene88951:CDS | 65.0% | |
| TTGAGGGCCTGCGCAAGGGA+GGG | - | chr1.3:249028-249047 | MS.gene88951:CDS | 65.0% | |
| CTTGAGGGCCTGCGCAAGGG+AGG | - | chr1.3:249027-249046 | MS.gene88951:CDS | 70.0% | |
| TGAGGGCCTGCGCAAGGGAG+GGG | - | chr1.3:249029-249048 | MS.gene88951:CDS | 70.0% | |
| CACCTCCCCCTCCCTTGCGC+AGG | + | chr1.3:249038-249057 | None:intergenic | 75.0% | |
| CGCAAGGGAGGGGGAGGTGG+AGG | - | chr1.3:249039-249058 | MS.gene88951:CDS | 75.0% | |
| CTGCGCAAGGGAGGGGGAGG+TGG | - | chr1.3:249036-249055 | MS.gene88951:CDS | 75.0% | |
| GAGGGCCTGCGCAAGGGAGG+GGG | - | chr1.3:249030-249049 | MS.gene88951:CDS | 75.0% | |
| ! | GGCCTGCGCAAGGGAGGGGG+AGG | - | chr1.3:249033-249052 | MS.gene88951:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 248524 | 250350 | 248524 | ID=MS.gene88951 |
| chr1.3 | mRNA | 248524 | 250350 | 248524 | ID=MS.gene88951.t1;Parent=MS.gene88951 |
| chr1.3 | exon | 248524 | 250350 | 248524 | ID=MS.gene88951.t1.exon1;Parent=MS.gene88951.t1 |
| chr1.3 | CDS | 248524 | 250350 | 248524 | ID=cds.MS.gene88951.t1;Parent=MS.gene88951.t1 |
| Gene Sequence |
| Protein sequence |
