AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89517

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89517.t1 MTR_5g062230 93.852 553 34 0 1 553 1 553 0.0 1083
MS.gene89517.t1 MTR_6g039440 75.769 553 134 0 1 553 1 553 0.0 896
MS.gene89517.t1 MTR_6g008560 71.993 557 152 2 1 553 1 557 0.0 855
MS.gene89517.t1 MTR_4g048460 69.217 549 166 1 8 553 13 561 0.0 790
MS.gene89517.t1 MTR_3g464190 66.607 557 182 2 1 553 1 557 0.0 780
MS.gene89517.t1 MTR_5g073200 65.498 542 186 1 13 553 8 549 0.0 754
MS.gene89517.t1 MTR_5g094620 63.849 556 179 2 1 553 1 537 0.0 753
MS.gene89517.t1 MTR_5g073260 62.703 555 202 3 1 553 1 552 0.0 738
MS.gene89517.t1 MTR_4g081460 54.937 557 245 3 2 553 7 562 0.0 646
MS.gene89517.t1 MTR_4g048460 68.805 452 138 1 8 456 13 464 0.0 642
MS.gene89517.t1 MTR_6g008560 72.070 401 112 0 153 553 1 401 0.0 631
MS.gene89517.t1 MTR_2g081980 43.828 559 306 7 1 553 1 557 1.66e-165 482
MS.gene89517.t1 MTR_2g082010 44.404 545 297 6 13 553 26 568 2.63e-165 482
MS.gene89517.t1 MTR_8g007515 43.773 546 299 6 14 553 13 556 1.15e-163 477
MS.gene89517.t1 MTR_2g082060 42.934 559 299 9 1 553 9 553 7.72e-155 454
MS.gene89517.t1 MTR_4g019550 42.602 561 303 8 1 553 9 558 9.04e-149 439
MS.gene89517.t1 MTR_2g082050 39.010 505 249 8 50 551 9 457 2.95e-118 357
MS.gene89517.t1 MTR_4g045810 33.516 546 358 3 7 551 38 579 7.08e-109 337
MS.gene89517.t1 MTR_2g064425 33.516 546 353 6 9 552 48 585 3.91e-97 307
MS.gene89517.t1 MTR_2g089120 34.570 512 312 9 48 552 69 564 6.05e-96 303
MS.gene89517.t1 MTR_2g089130 34.177 474 297 4 64 533 84 546 2.21e-93 296
MS.gene89517.t1 MTR_7g057340 75.581 172 42 0 382 553 1 172 1.85e-91 278
MS.gene89517.t1 MTR_8g057020 32.532 541 356 5 14 552 55 588 2.76e-90 289
MS.gene89517.t1 MTR_2g064425 32.234 546 345 8 9 552 48 570 7.24e-89 285
MS.gene89517.t1 MTR_2g065450 31.769 554 361 6 7 552 45 589 1.57e-88 285
MS.gene89517.t1 MTR_7g057390 71.512 172 46 1 382 553 1 169 2.86e-83 257
MS.gene89517.t1 MTR_2g064425 40.489 368 210 5 9 374 48 408 5.12e-83 266
MS.gene89517.t1 MTR_4g092020 33.075 517 331 8 40 551 63 569 5.70e-83 270
MS.gene89517.t1 MTR_7g010710 29.167 552 382 6 2 549 5 551 1.41e-77 255
MS.gene89517.t1 MTR_4g092010 29.466 543 372 7 12 549 20 556 2.20e-76 252
MS.gene89517.t1 MTR_2g064425 38.587 368 202 7 9 374 48 393 4.43e-75 244
MS.gene89517.t1 MTR_5g094530 55.046 218 62 3 163 378 1 184 2.79e-72 229
MS.gene89517.t1 MTR_2g010960 28.046 517 355 8 38 540 1 514 1.51e-68 230
MS.gene89517.t1 MTR_6g064980 27.992 493 345 7 60 543 21 512 1.01e-58 204
MS.gene89517.t1 MTR_3g063170 27.004 474 338 7 60 526 21 493 3.92e-58 202
MS.gene89517.t1 MTR_3g063120 28.205 468 321 7 70 526 6 469 1.90e-57 200
MS.gene89517.t1 MTR_7g050990 56.989 186 62 4 189 370 16 187 3.22e-57 206
MS.gene89517.t1 MTR_3g465090 27.789 475 333 7 60 526 21 493 6.79e-57 199
MS.gene89517.t1 MTR_3g052120 28.261 506 346 12 52 547 14 512 9.53e-57 198
MS.gene89517.t1 MTR_3g063140 26.775 493 351 8 60 543 21 512 2.60e-55 194
MS.gene89517.t1 MTR_6g065040 27.865 384 270 5 149 526 9 391 6.18e-48 172
MS.gene89517.t1 MTR_3g015080 48.256 172 51 2 382 553 1 134 2.75e-47 161
MS.gene89517.t1 MTR_3g058160 27.907 430 275 13 66 467 64 486 4.51e-35 139
MS.gene89517.t1 MTR_3g058160 28.241 432 271 14 66 467 255 677 1.16e-34 139
MS.gene89517.t1 MTR_3g058160 28.241 432 271 14 66 467 268 690 1.35e-34 139
MS.gene89517.t1 MTR_3g058160 28.241 432 271 14 66 467 275 697 1.41e-34 139
MS.gene89517.t1 MTR_3g063160 30.112 269 184 4 60 325 21 288 8.98e-33 127
MS.gene89517.t1 MTR_3g058160 27.373 453 269 15 66 467 275 718 6.52e-32 131
MS.gene89517.t1 MTR_2g064295 26.494 385 257 9 66 427 255 636 2.73e-31 129
MS.gene89517.t1 MTR_2g012900 23.848 499 335 14 21 484 212 700 1.59e-29 124
MS.gene89517.t1 MTR_2g012870 23.327 523 364 14 21 519 212 721 3.19e-27 117
MS.gene89517.t1 MTR_7g094970 27.881 269 164 7 70 310 211 477 1.66e-22 102
MS.gene89517.t1 MTR_5g030050 28.302 265 155 8 70 309 3 257 7.53e-21 94.0
MS.gene89517.t1 MTR_7g011663 29.008 262 158 5 68 302 347 607 2.47e-20 95.5
MS.gene89517.t1 MTR_7g011770 29.210 291 177 6 70 332 245 534 2.54e-20 95.5
MS.gene89517.t1 MTR_5g081730 38.542 96 59 0 159 254 16 111 1.05e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89517.t1 AT5G23960 40.625 544 314 5 14 553 7 545 2.19e-150 443
MS.gene89517.t1 AT5G23960 40.659 546 313 6 14 553 7 547 3.20e-150 442
MS.gene89517.t1 AT1G70080 37.478 563 333 9 5 553 54 611 2.10e-125 381
MS.gene89517.t1 AT3G14490 37.729 546 330 5 14 553 60 601 4.50e-123 375
MS.gene89517.t1 AT1G31950 34.011 541 347 5 19 553 70 606 1.05e-114 353
MS.gene89517.t1 AT3G14520 34.502 542 343 6 19 553 68 604 5.96e-114 351
MS.gene89517.t1 AT1G31950 33.948 542 347 6 19 553 70 607 6.55e-114 351
MS.gene89517.t1 AT3G29410 34.622 543 349 4 14 553 64 603 1.33e-111 345
MS.gene89517.t1 AT3G14540 34.686 542 342 6 19 553 65 601 2.36e-111 344
MS.gene89517.t1 AT5G44630 35.348 546 340 9 15 551 14 555 2.04e-110 340
MS.gene89517.t1 AT1G33750 33.942 548 346 8 13 553 65 603 2.13e-109 339
MS.gene89517.t1 AT3G32030 34.502 542 343 8 19 553 68 604 7.88e-107 333
MS.gene89517.t1 AT4G15870 35.448 536 322 10 24 551 77 596 8.46e-107 332
MS.gene89517.t1 AT3G29410 35.329 501 318 4 56 553 1 498 5.71e-106 327
MS.gene89517.t1 AT4G13300 35.701 535 333 7 24 551 22 552 6.10e-106 329
MS.gene89517.t1 AT4G20230 34.791 549 340 11 12 549 60 601 1.45e-102 322
MS.gene89517.t1 AT4G20210 32.790 552 362 6 8 553 52 600 1.51e-102 322
MS.gene89517.t1 AT4G20230 34.791 549 340 11 12 549 72 613 2.66e-102 322
MS.gene89517.t1 AT4G13280 35.688 538 333 8 24 553 22 554 2.50e-100 314
MS.gene89517.t1 AT4G20200 33.394 548 352 7 14 553 62 604 3.40e-100 315
MS.gene89517.t1 AT3G29190 33.769 536 346 6 24 553 69 601 5.12e-99 312
MS.gene89517.t1 AT1G31950 34.685 444 280 5 19 456 70 509 6.06e-95 300
MS.gene89517.t1 AT1G66020 34.062 549 347 9 14 553 56 598 2.93e-94 300
MS.gene89517.t1 AT2G23230 32.058 549 358 9 13 551 55 598 1.17e-93 298
MS.gene89517.t1 AT4G16730 31.549 523 342 6 43 553 21 539 2.20e-92 293
MS.gene89517.t1 AT3G29110 33.211 545 353 7 14 551 55 595 3.10e-92 295
MS.gene89517.t1 AT2G23230 31.949 554 347 10 13 551 55 593 3.84e-92 295
MS.gene89517.t1 AT3G14540 34.821 448 281 5 19 460 65 507 1.17e-90 288
MS.gene89517.t1 AT4G16730 31.855 496 323 5 70 553 1 493 5.55e-90 285
MS.gene89517.t1 AT4G13280 34.387 538 310 10 24 553 22 524 6.57e-88 281
MS.gene89517.t1 AT1G48800 31.843 559 364 10 2 549 50 602 1.21e-87 283
MS.gene89517.t1 AT4G16740 30.769 559 361 11 7 553 20 564 1.03e-83 271
MS.gene89517.t1 AT3G25810 30.282 568 373 9 3 553 36 597 1.27e-82 269
MS.gene89517.t1 AT1G61680 31.548 504 325 8 52 547 78 569 2.93e-81 265
MS.gene89517.t1 AT2G24210 29.818 550 361 10 13 551 45 580 3.54e-81 265
MS.gene89517.t1 AT3G25830 29.422 571 375 12 3 553 32 594 6.53e-81 265
MS.gene89517.t1 AT3G25820 29.422 571 375 12 3 553 32 594 6.53e-81 265
MS.gene89517.t1 AT1G61680 31.746 504 317 9 52 547 78 562 1.60e-78 258
MS.gene89517.t1 AT1G48820 31.123 543 322 12 14 549 63 560 3.77e-78 256
MS.gene89517.t1 AT5G48110 36.842 342 211 5 213 553 2 339 1.73e-74 240
MS.gene89517.t1 AT4G16740 34.204 383 231 8 7 378 20 392 7.85e-67 222
MS.gene89517.t1 AT1G66020 36.413 368 223 7 14 374 56 419 1.98e-65 219
MS.gene89517.t1 AT3G25820 32.080 399 248 9 3 386 32 422 2.83e-62 211
MS.gene89517.t1 AT4G16740 35.542 332 193 8 7 327 20 341 1.87e-57 196
MS.gene89517.t1 AT4G16740 35.542 332 193 8 7 327 20 341 1.87e-57 196
MS.gene89517.t1 AT3G25820 32.647 340 206 9 3 327 32 363 2.41e-52 184
MS.gene89517.t1 AT3G25820 32.647 340 206 9 3 327 32 363 2.41e-52 184
MS.gene89517.t1 AT1G79460 24.184 521 348 19 66 553 273 779 2.81e-25 110
MS.gene89517.t1 AT1G61120 23.002 513 360 15 65 553 283 784 2.12e-21 99.0
MS.gene89517.t1 AT4G02780 29.323 266 158 6 68 305 332 595 1.88e-20 95.9

Find 91 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTCTCGCTGTGCTATTT+AGG 0.126479 5.4:+48743687 MS.gene89517:CDS
CTAAAACTGGATGCTTAAAT+TGG 0.160304 5.4:-48747077 None:intergenic
AGATGTGTTCACCAAGTTTA+AGG 0.171551 5.4:+48744001 MS.gene89517:intron
CACAAGAGCTATGTTGAAAA+TGG 0.199028 5.4:+48743638 MS.gene89517:CDS
CTCTCTCGCTGTGCTATTTA+GGG 0.207543 5.4:+48743688 MS.gene89517:CDS
TATTCATGGAGAGGAAATTT+TGG 0.247279 5.4:+48744103 MS.gene89517:CDS
AGCCAATCTTTGCAGGTTAA+TGG 0.266883 5.4:+48746218 MS.gene89517:CDS
CAGAATTTCACCCAAATGTC+TGG 0.305980 5.4:+48743303 MS.gene89517:CDS
AAAACATGTTTGCTCATTGT+TGG 0.311477 5.4:+48746806 MS.gene89517:CDS
GGATTGTCGAATGTTGCTTC+TGG 0.320132 5.4:+48744535 MS.gene89517:CDS
AAATATTCTCCCCAGACATT+TGG 0.320286 5.4:-48743314 None:intergenic
GTGCCGCAGCCAATCTTTGC+AGG 0.328094 5.4:+48746211 MS.gene89517:CDS
ATTTCCTTGCTAGAGAATAC+TGG 0.329894 5.4:-48744581 None:intergenic
TAAATTAATTTCATGTAGTC+TGG 0.356370 5.4:-48744850 None:intergenic
AGATTTCTTTGCTTGGCGTC+AGG 0.356623 5.4:-48743278 None:intergenic
ATCCATTAACCTGCAAAGAT+TGG 0.365552 5.4:-48746220 None:intergenic
AATATTCTCCCCAGACATTT+GGG 0.380119 5.4:-48743313 None:intergenic
AAGAAAAGGCATTGGAACTT+TGG 0.385858 5.4:-48746937 None:intergenic
CCACGGAGAACATCTTCAAT+TGG 0.392535 5.4:+48746163 MS.gene89517:CDS
TGCATGTACTCTTCTATAGT+TGG 0.397995 5.4:-48746072 None:intergenic
GCCTCACATATGATTATTCA+TGG 0.403293 5.4:+48744089 MS.gene89517:CDS
CAGGTGGGATATTAGCATCT+TGG 0.406616 5.4:+48744819 MS.gene89517:intron
ATATAAATGAGGAATGTCTT+AGG 0.410838 5.4:+48746910 MS.gene89517:CDS
AAGCAGTTGCAATTCCCTTC+TGG 0.421915 5.4:-48746881 None:intergenic
TTCTGCAAGATTTCTTTGCT+TGG 0.427036 5.4:-48743285 None:intergenic
TTAACTTCTTACATTGGAAT+GGG 0.433315 5.4:+48746132 MS.gene89517:CDS
GAGCAGGAAATGAGGAAAGA+AGG 0.444481 5.4:+48744904 MS.gene89517:CDS
CTAGCCTTGGCAAGTTCTTG+TGG 0.451175 5.4:-48744226 None:intergenic
ATTAACTTCTTACATTGGAA+TGG 0.453994 5.4:+48746131 MS.gene89517:CDS
CCTTCATAAGTCCTTGAGAA+TGG 0.454397 5.4:-48747022 None:intergenic
TCCTTCCTCGTCCTTAAACT+TGG 0.460450 5.4:-48744012 None:intergenic
TGCAAGAAAGTGACTCGTTT+GGG 0.467677 5.4:-48744171 None:intergenic
AAAGGCATTGGAACTTTGGT+TGG 0.468298 5.4:-48746933 None:intergenic
GATGATACATATGATGCATA+TGG 0.472052 5.4:+48744639 MS.gene89517:CDS
TTAAAGATGGTGGAAGGAGT+TGG 0.472988 5.4:+48744479 MS.gene89517:intron
AACTGCCTTATGCACGTCAT+AGG 0.477010 5.4:+48744514 MS.gene89517:CDS
TGATGAAATTCTACTCACTT+TGG 0.477899 5.4:+48744292 MS.gene89517:CDS
TGAAGGAGTATGATATGTCT+AGG 0.485271 5.4:+48746838 MS.gene89517:CDS
ACAATCCTATGACGTGCATA+AGG 0.495156 5.4:-48744519 None:intergenic
CTGCAAGAAAGTGACTCGTT+TGG 0.497922 5.4:-48744172 None:intergenic
TTGATATTAACTTCTTACAT+TGG 0.498156 5.4:+48746126 MS.gene89517:CDS
GAACAACCTTTGAATTGCCT+TGG 0.501955 5.4:-48744688 None:intergenic
AGAAGGGAATTGCAACTGCT+TGG 0.502158 5.4:+48746883 MS.gene89517:CDS
TTTCCTTGCTAGAGAATACT+GGG 0.503157 5.4:-48744580 None:intergenic
CACGGAGAACATCTTCAATT+GGG 0.510447 5.4:+48746164 MS.gene89517:CDS
GTGACTCGTTTGGGTGGCAA+TGG 0.514494 5.4:-48744162 None:intergenic
CTTCATAAGTCCTTGAGAAT+GGG 0.514640 5.4:-48747021 None:intergenic
TTGAGAGCACGAATAAGAAA+AGG 0.516227 5.4:-48746951 None:intergenic
AATTAATTTATGAAACACTC+TGG 0.517037 5.4:+48744863 MS.gene89517:CDS
GATTTCTTTGCTTGGCGTCA+GGG 0.518796 5.4:-48743277 None:intergenic
AAGAAATAGAGCAGGAAATG+AGG 0.520129 5.4:+48744896 MS.gene89517:CDS
AGAATTTCACCCAAATGTCT+GGG 0.526240 5.4:+48743304 MS.gene89517:CDS
AGTCAAATATGCTTTAAGAC+AGG 0.532235 5.4:+48744199 MS.gene89517:CDS
TATCGTCGTGCCTCTAGCCT+TGG 0.535193 5.4:-48744239 None:intergenic
CAGATAAAAGTGACAGTCCA+AGG 0.542805 5.4:+48746009 MS.gene89517:intron
ATTGTTGGATTGCTACATGA+AGG 0.548102 5.4:+48746821 MS.gene89517:CDS
TGATCTTTAAAGATGGTGGA+AGG 0.548329 5.4:+48744473 MS.gene89517:intron
ACGACATATTGAATCAATCA+AGG 0.552162 5.4:-48743561 None:intergenic
ATAGCACAGCGAGAGAGTAA+AGG 0.556765 5.4:-48743682 None:intergenic
GACAATTACACCCATTCTCA+AGG 0.561159 5.4:+48747011 MS.gene89517:CDS
AGCCCCAGTATTCTCTAGCA+AGG 0.562995 5.4:+48744577 MS.gene89517:CDS
TGGCCTCAGTAATAAAACCT+TGG 0.569302 5.4:-48746026 None:intergenic
GAACTAATCACCGATGTCGA+AGG 0.571062 5.4:+48744047 MS.gene89517:CDS
ATTGATTCAATATGTCGTCT+CGG 0.576187 5.4:+48743566 MS.gene89517:CDS
TCAATATGCTTCAGAATCGA+TGG 0.579838 5.4:+48743340 MS.gene89517:CDS
CCATTCTCAAGGACTTATGA+AGG 0.579997 5.4:+48747022 MS.gene89517:CDS
AACTAATCACCGATGTCGAA+GGG 0.581512 5.4:+48744048 MS.gene89517:CDS
GCACGAATAAGAAAAGGCAT+TGG 0.582827 5.4:-48746945 None:intergenic
GCTTAACATCCCTTCGACAT+CGG 0.583023 5.4:-48744057 None:intergenic
CAAGAACTTGCCAAGGCTAG+AGG 0.583333 5.4:+48744229 MS.gene89517:CDS
CTCTCCACAAGAACTTGCCA+AGG 0.588910 5.4:+48744222 MS.gene89517:CDS
ACCAAGTTTAAGGACGAGGA+AGG 0.589430 5.4:+48744011 MS.gene89517:CDS
GAAGGAGTATGATATGTCTA+GGG 0.592618 5.4:+48746839 MS.gene89517:CDS
GTTCACCAAGTTTAAGGACG+AGG 0.597717 5.4:+48744007 MS.gene89517:CDS
GGCAATGGACTCGAGGTGAG+TGG 0.598560 5.4:-48744147 None:intergenic
AGTAGAATTTCATCATGCGA+AGG 0.604328 5.4:-48744284 None:intergenic
TGCTATTCAAGAATGCCAGA+AGG 0.606199 5.4:+48746866 MS.gene89517:CDS
TAACCTGCAAAGATTGGCTG+CGG 0.606263 5.4:-48746214 None:intergenic
GCTATTCAAGAATGCCAGAA+GGG 0.608852 5.4:+48746867 MS.gene89517:CDS
TTTGGGTGGCAATGGACTCG+AGG 0.626346 5.4:-48744154 None:intergenic
TGCTTGGAAAGATATAAATG+AGG 0.627963 5.4:+48746899 MS.gene89517:CDS
ACATATGATTATTCATGGAG+AGG 0.630498 5.4:+48744094 MS.gene89517:CDS
AAGAAAGTGACTCGTTTGGG+TGG 0.638271 5.4:-48744168 None:intergenic
TCCATGAATAATCATATGTG+AGG 0.649430 5.4:-48744090 None:intergenic
CCAATTGAAGATGTTCTCCG+TGG 0.681269 5.4:-48746163 None:intergenic
GAATTTCACCCAAATGTCTG+GGG 0.686951 5.4:+48743305 MS.gene89517:CDS
TTCCTTGCTAGAGAATACTG+GGG 0.699519 5.4:-48744579 None:intergenic
ATACTGGGGCTCAAAATATG+CGG 0.703279 5.4:-48744565 None:intergenic
GGATGAAATTGTCTCCAGCG+AGG 0.739710 5.4:+48746239 MS.gene89517:CDS
AAATTGGAACACGATCAACA+AGG 0.741392 5.4:-48747061 None:intergenic
TGGAATGGGAGAAAATACCA+CGG 0.766243 5.4:+48746146 MS.gene89517:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAAAAGTTATTAAC+AGG - chr5.4:48744448-48744467 None:intergenic 10.0%
!! TTATATGTATAAATAAGTTA+TGG - chr5.4:48745059-48745078 None:intergenic 10.0%
!!! ACAAAATTTATTTGATTTAT+TGG + chr5.4:48746448-48746467 MS.gene89517:intron 10.0%
!!! TAAGATAAAATTTCTTTTAA+TGG + chr5.4:48745424-48745443 MS.gene89517:intron 10.0%
!! AATTTATTAAACAAAAGAAC+TGG + chr5.4:48744717-48744736 MS.gene89517:intron 15.0%
!! ACAAAATTAAAGTTATCATA+AGG + chr5.4:48744416-48744435 MS.gene89517:intron 15.0%
!!! AAAGTAGAACATTTTTTTTT+TGG + chr5.4:48746612-48746631 MS.gene89517:intron 15.0%
!!! ACTCACATTAATTTTTTTTT+TGG + chr5.4:48746762-48746781 MS.gene89517:intron 15.0%
!!! ATCAAATTTTAAATTTGTGA+AGG + chr5.4:48745708-48745727 MS.gene89517:intron 15.0%
!!! GTTGATAAATTTATCAATTT+GGG + chr5.4:48745827-48745846 MS.gene89517:intron 15.0%
!!! TGTATTACAGATAATTTTTT+TGG - chr5.4:48746279-48746298 None:intergenic 15.0%
!! AAATGTTAATAGATGCATTT+GGG + chr5.4:48745313-48745332 MS.gene89517:intron 20.0%
!! AATGAAATAATAAATGGGTA+AGG + chr5.4:48746389-48746408 MS.gene89517:intron 20.0%
!! AATTAAATATGTTTGAGTCA+TGG - chr5.4:48743759-48743778 None:intergenic 20.0%
!! AATTAATTTATGAAACACTC+TGG + chr5.4:48744863-48744882 MS.gene89517:CDS 20.0%
!! AATTCAACCAATTAACTTAT+CGG - chr5.4:48743864-48743883 None:intergenic 20.0%
!! ATAATATCATAACCAATTAG+TGG - chr5.4:48743385-48743404 None:intergenic 20.0%
!! ATTTATTAACATAGTCTCAA+GGG - chr5.4:48746654-48746673 None:intergenic 20.0%
!! TAAATTAATTTCATGTAGTC+TGG - chr5.4:48744853-48744872 None:intergenic 20.0%
!! TATTTATTAACATAGTCTCA+AGG - chr5.4:48746655-48746674 None:intergenic 20.0%
!! TCAAACATAATTTCTACTAA+TGG - chr5.4:48746571-48746590 None:intergenic 20.0%
!! TCTCTACAATAAATAAGTAA+GGG - chr5.4:48746357-48746376 None:intergenic 20.0%
!! TGCATTTACTATAAAATTCA+TGG + chr5.4:48745850-48745869 MS.gene89517:intron 20.0%
!! TGCTAATAATTAATTAGAGA+AGG - chr5.4:48744977-48744996 None:intergenic 20.0%
!! TGGTAGAAAAAAAAAAGTTA+TGG - chr5.4:48745012-48745031 None:intergenic 20.0%
!! TTATCTTTGCTCTTATAAAA+AGG - chr5.4:48745086-48745105 None:intergenic 20.0%
!! TTGATATTAACTTCTTACAT+TGG + chr5.4:48746126-48746145 MS.gene89517:CDS 20.0%
!!! AAATGTTAAAAGTGATTTTC+AGG + chr5.4:48744800-48744819 MS.gene89517:intron 20.0%
!!! CGTTGATAAATTTATCAATT+TGG + chr5.4:48745826-48745845 MS.gene89517:intron 20.0%
!!! TGATTAATGAGATTGATTTA+AGG - chr5.4:48745266-48745285 None:intergenic 20.0%
!!! TTCTTTTATAAAGTACTTCA+TGG - chr5.4:48744941-48744960 None:intergenic 20.0%
!!! TTGATTTTGATCTTTAAAGA+TGG + chr5.4:48744466-48744485 MS.gene89517:intron 20.0%
! AACTCAACTAGTATTAAACA+TGG + chr5.4:48745538-48745557 MS.gene89517:intron 25.0%
! AAGACCACACAATTAATAAA+AGG + chr5.4:48745289-48745308 MS.gene89517:intron 25.0%
! AGAATTGCAGATTATTAAAG+AGG + chr5.4:48745224-48745243 MS.gene89517:intron 25.0%
! AGACCACACAATTAATAAAA+GGG + chr5.4:48745290-48745309 MS.gene89517:intron 25.0%
! ATATAAATGAGGAATGTCTT+AGG + chr5.4:48746910-48746929 MS.gene89517:CDS 25.0%
! ATTAACTTCTTACATTGGAA+TGG + chr5.4:48746131-48746150 MS.gene89517:CDS 25.0%
! ATTATTAAAGAGGATTTCGA+AGG + chr5.4:48745234-48745253 MS.gene89517:intron 25.0%
! ATTCCTTAAACAATATCCTT+AGG + chr5.4:48745447-48745466 MS.gene89517:intron 25.0%
! ATTTGTTTCCAACCAAATAA+AGG - chr5.4:48745690-48745709 None:intergenic 25.0%
! CTCTCTACAATAAATAAGTA+AGG - chr5.4:48746358-48746377 None:intergenic 25.0%
! GAAATGTTAATAGATGCATT+TGG + chr5.4:48745312-48745331 MS.gene89517:intron 25.0%
! TCATGATAACATGTATTCTA+AGG - chr5.4:48746714-48746733 None:intergenic 25.0%
! TGAATAACCGATAAGTTAAT+TGG + chr5.4:48743854-48743873 MS.gene89517:intron 25.0%
! TTAACTTCTTACATTGGAAT+GGG + chr5.4:48746132-48746151 MS.gene89517:CDS 25.0%
! TTCCTTAAACAATATCCTTA+GGG + chr5.4:48745448-48745467 MS.gene89517:intron 25.0%
!! TTAATGAGATTGATTTAAGG+AGG - chr5.4:48745263-48745282 None:intergenic 25.0%
!! TTTCCCTTTTATTAATTGTG+TGG - chr5.4:48745296-48745315 None:intergenic 25.0%
!!! AAAAAGTTCTAGTTCATCAA+TGG - chr5.4:48744667-48744686 None:intergenic 25.0%
!!! AGGGAGTACTATTTATTTTA+TGG + chr5.4:48746512-48746531 MS.gene89517:intron 25.0%
!!! ATATATTTTAAATACCTCGC+TGG - chr5.4:48746256-48746275 None:intergenic 25.0%
!!! ATATTGCTATTTCCACTAAT+TGG + chr5.4:48743370-48743389 MS.gene89517:intron 25.0%
!!! ATTTTGATCTTTAAAGATGG+TGG + chr5.4:48744469-48744488 MS.gene89517:intron 25.0%
!!! GGGAGTACTATTTATTTTAT+GGG + chr5.4:48746513-48746532 MS.gene89517:intron 25.0%
!!! TGACTCTTATTTTATTTCAC+AGG + chr5.4:48746731-48746750 MS.gene89517:intron 25.0%
AAAACATGTTTGCTCATTGT+TGG + chr5.4:48746806-48746825 MS.gene89517:CDS 30.0%
AAATATGTTTGAGTCATGGA+TGG - chr5.4:48743755-48743774 None:intergenic 30.0%
AACCACTTGTAGTTAAAGAA+AGG - chr5.4:48745508-48745527 None:intergenic 30.0%
AAGCGACATGTATTATGAAA+CGG - chr5.4:48746308-48746327 None:intergenic 30.0%
ACATATGATTATTCATGGAG+AGG + chr5.4:48744094-48744113 MS.gene89517:CDS 30.0%
ACGACATATTGAATCAATCA+AGG - chr5.4:48743564-48743583 None:intergenic 30.0%
CTAATGGAATCCTTAATATC+TGG - chr5.4:48746555-48746574 None:intergenic 30.0%
GAAAGTTCATGCAAAAGTTT+AGG + chr5.4:48745649-48745668 MS.gene89517:intron 30.0%
GATGATACATATGATGCATA+TGG + chr5.4:48744639-48744658 MS.gene89517:CDS 30.0%
TAGCATGTATCCAGATATTA+AGG + chr5.4:48746542-48746561 MS.gene89517:intron 30.0%
TCCATGAATAATCATATGTG+AGG - chr5.4:48744093-48744112 None:intergenic 30.0%
TCTTAACCCTCATATTCTTA+GGG + chr5.4:48745170-48745189 MS.gene89517:intron 30.0%
TGATGAAATTCTACTCACTT+TGG + chr5.4:48744292-48744311 MS.gene89517:CDS 30.0%
TGCTTGGAAAGATATAAATG+AGG + chr5.4:48746899-48746918 MS.gene89517:CDS 30.0%
! ATTGATTCAATATGTCGTCT+CGG + chr5.4:48743566-48743585 MS.gene89517:CDS 30.0%
! TATTCATGGAGAGGAAATTT+TGG + chr5.4:48744103-48744122 MS.gene89517:CDS 30.0%
! TATTTTCGAAGAAATAGAGC+AGG + chr5.4:48744888-48744907 MS.gene89517:CDS 30.0%
! TGAACTAGAACTTTTTACCA+AGG + chr5.4:48744671-48744690 MS.gene89517:CDS 30.0%
! TTCCAAACTCTTTTTGATGT+AGG - chr5.4:48744346-48744365 None:intergenic 30.0%
! TTTTTACCAAGGCAATTCAA+AGG + chr5.4:48744682-48744701 MS.gene89517:CDS 30.0%
!! AGTCAAATATGCTTTAAGAC+AGG + chr5.4:48744199-48744218 MS.gene89517:CDS 30.0%
!! TGTTAAAAGTGATTTTCAGG+TGG + chr5.4:48744803-48744822 MS.gene89517:intron 30.0%
!!! GTTAAAAGTGATTTTCAGGT+GGG + chr5.4:48744804-48744823 MS.gene89517:intron 30.0%
AAACTCTCTCAGCCTTTATT+TGG + chr5.4:48745675-48745694 MS.gene89517:intron 35.0%
AAATATTCTCCCCAGACATT+TGG - chr5.4:48743317-48743336 None:intergenic 35.0%
AAATTGGAACACGATCAACA+AGG - chr5.4:48747064-48747083 None:intergenic 35.0%
AAGAAATAGAGCAGGAAATG+AGG + chr5.4:48744896-48744915 MS.gene89517:CDS 35.0%
AATATTCTCCCCAGACATTT+GGG - chr5.4:48743316-48743335 None:intergenic 35.0%
AGAATTTCACCCAAATGTCT+GGG + chr5.4:48743304-48743323 MS.gene89517:CDS 35.0%
AGATGTGTTCACCAAGTTTA+AGG + chr5.4:48744001-48744020 MS.gene89517:intron 35.0%
AGCCTACATCAAAAAGAGTT+TGG + chr5.4:48744341-48744360 MS.gene89517:CDS 35.0%
AGTAGAATTTCATCATGCGA+AGG - chr5.4:48744287-48744306 None:intergenic 35.0%
ATCCATTAACCTGCAAAGAT+TGG - chr5.4:48746223-48746242 None:intergenic 35.0%
ATTGTTGGATTGCTACATGA+AGG + chr5.4:48746821-48746840 MS.gene89517:CDS 35.0%
ATTTCCTTGCTAGAGAATAC+TGG - chr5.4:48744584-48744603 None:intergenic 35.0%
CACAAGAGCTATGTTGAAAA+TGG + chr5.4:48743638-48743657 MS.gene89517:CDS 35.0%
CATGAACTTTCACTCCTAAA+AGG - chr5.4:48745640-48745659 None:intergenic 35.0%
CTCCTTTCTTTAACTACAAG+TGG + chr5.4:48745503-48745522 MS.gene89517:intron 35.0%
CTTAACCCTCATATTCTTAG+GGG + chr5.4:48745171-48745190 MS.gene89517:intron 35.0%
CTTCATAAGTCCTTGAGAAT+GGG - chr5.4:48747024-48747043 None:intergenic 35.0%
GCATATGATTAGAGATAAGC+TGG - chr5.4:48743442-48743461 None:intergenic 35.0%
GCCTCACATATGATTATTCA+TGG + chr5.4:48744089-48744108 MS.gene89517:CDS 35.0%
GCTTATCTCTAATCATATGC+AGG + chr5.4:48743442-48743461 MS.gene89517:intron 35.0%
GTCATGGATGGATATATACT+TGG - chr5.4:48743743-48743762 None:intergenic 35.0%
GTCTTAACCCTCATATTCTT+AGG + chr5.4:48745169-48745188 MS.gene89517:intron 35.0%
TACTAATTGTCTGTTCGTGA+TGG + chr5.4:48745986-48746005 MS.gene89517:intron 35.0%
TCAATATGCTTCAGAATCGA+TGG + chr5.4:48743340-48743359 MS.gene89517:CDS 35.0%
TGCATGTACTCTTCTATAGT+TGG - chr5.4:48746075-48746094 None:intergenic 35.0%
TGCCCTAAGGATATTGTTTA+AGG - chr5.4:48745453-48745472 None:intergenic 35.0%
TTAACCCTCATATTCTTAGG+GGG + chr5.4:48745172-48745191 MS.gene89517:intron 35.0%
TTAACCGTTTGCTCGAATAA+TGG - chr5.4:48743419-48743438 None:intergenic 35.0%
TTCTGCAAGATTTCTTTGCT+TGG - chr5.4:48743288-48743307 None:intergenic 35.0%
TTTCCTTGCTAGAGAATACT+GGG - chr5.4:48744583-48744602 None:intergenic 35.0%
! AAGCGACAAGTATTGTGAAA+CGG + chr5.4:48746489-48746508 MS.gene89517:intron 35.0%
! ACTCTTTTTGATGTAGGCTT+TGG - chr5.4:48744340-48744359 None:intergenic 35.0%
! ATAGTTTTCGTTCAACCATC+TGG - chr5.4:48746049-48746068 None:intergenic 35.0%
! ATCAAGGTAACTTTTGCCAA+TGG - chr5.4:48743548-48743567 None:intergenic 35.0%
! GAAGGAGTATGATATGTCTA+GGG + chr5.4:48746839-48746858 MS.gene89517:CDS 35.0%
! TGAAGGAGTATGATATGTCT+AGG + chr5.4:48746838-48746857 MS.gene89517:CDS 35.0%
! TTGAGAGCACGAATAAGAAA+AGG - chr5.4:48746954-48746973 None:intergenic 35.0%
!! AAGAAAAGGCATTGGAACTT+TGG - chr5.4:48746940-48746959 None:intergenic 35.0%
!! TGATCTTTAAAGATGGTGGA+AGG + chr5.4:48744473-48744492 MS.gene89517:intron 35.0%
!! TGTCGTTAGTTTAGCCTTTT+AGG + chr5.4:48745623-48745642 MS.gene89517:intron 35.0%
!!! AGTCCAAGGTTTTATTACTG+AGG + chr5.4:48746023-48746042 MS.gene89517:CDS 35.0%
AACTAATCACCGATGTCGAA+GGG + chr5.4:48744048-48744067 MS.gene89517:CDS 40.0%
ACAATCCTATGACGTGCATA+AGG - chr5.4:48744522-48744541 None:intergenic 40.0%
ACTATCCCCCTAAGAATATG+AGG - chr5.4:48745180-48745199 None:intergenic 40.0%
AGCCAATCTTTGCAGGTTAA+TGG + chr5.4:48746218-48746237 MS.gene89517:CDS 40.0%
ATACTGGGGCTCAAAATATG+CGG - chr5.4:48744568-48744587 None:intergenic 40.0%
CACGGAGAACATCTTCAATT+GGG + chr5.4:48746164-48746183 MS.gene89517:CDS 40.0%
CAGAATTTCACCCAAATGTC+TGG + chr5.4:48743303-48743322 MS.gene89517:CDS 40.0%
CAGATAAAAGTGACAGTCCA+AGG + chr5.4:48746009-48746028 MS.gene89517:intron 40.0%
CCATCCATTATTCGAGCAAA+CGG + chr5.4:48743412-48743431 MS.gene89517:intron 40.0%
CCATTCTCAAGGACTTATGA+AGG + chr5.4:48747022-48747041 MS.gene89517:CDS 40.0%
CCTTCATAAGTCCTTGAGAA+TGG - chr5.4:48747025-48747044 None:intergenic 40.0%
CTATCCCCCTAAGAATATGA+GGG - chr5.4:48745179-48745198 None:intergenic 40.0%
CTCAAAAACTGAGATGCCAT+TGG + chr5.4:48743529-48743548 MS.gene89517:CDS 40.0%
GAACAACCTTTGAATTGCCT+TGG - chr5.4:48744691-48744710 None:intergenic 40.0%
GAATTTCACCCAAATGTCTG+GGG + chr5.4:48743305-48743324 MS.gene89517:CDS 40.0%
GACAATTACACCCATTCTCA+AGG + chr5.4:48747011-48747030 MS.gene89517:CDS 40.0%
GCTATTCAAGAATGCCAGAA+GGG + chr5.4:48746867-48746886 MS.gene89517:CDS 40.0%
TGCAAGAAAGTGACTCGTTT+GGG - chr5.4:48744174-48744193 None:intergenic 40.0%
TGCTATTCAAGAATGCCAGA+AGG + chr5.4:48746866-48746885 MS.gene89517:CDS 40.0%
TGGAATGGGAGAAAATACCA+CGG + chr5.4:48746146-48746165 MS.gene89517:CDS 40.0%
TGGCCTCAGTAATAAAACCT+TGG - chr5.4:48746029-48746048 None:intergenic 40.0%
TTATGCTAACAAGTGCCCTA+AGG - chr5.4:48745466-48745485 None:intergenic 40.0%
TTCCTTGCTAGAGAATACTG+GGG - chr5.4:48744582-48744601 None:intergenic 40.0%
! CTGCGGCACTAAGAATTTTT+GGG - chr5.4:48746200-48746219 None:intergenic 40.0%
! GACAAGTATTGTGAAACGGA+GGG + chr5.4:48746493-48746512 MS.gene89517:intron 40.0%
! GCACGAATAAGAAAAGGCAT+TGG - chr5.4:48746948-48746967 None:intergenic 40.0%
! TCTCTCAGCCTTTATTTGGT+TGG + chr5.4:48745679-48745698 MS.gene89517:intron 40.0%
!! AAAGGCATTGGAACTTTGGT+TGG - chr5.4:48746936-48746955 None:intergenic 40.0%
!! GGAAATTTTGGAAGAGGCAT+TGG + chr5.4:48744115-48744134 MS.gene89517:CDS 40.0%
!! GTTTTATTACTGAGGCCAGA+TGG + chr5.4:48746031-48746050 MS.gene89517:CDS 40.0%
!! TGGAGAGGAAATTTTGGAAG+AGG + chr5.4:48744109-48744128 MS.gene89517:CDS 40.0%
!! TTAAAGATGGTGGAAGGAGT+TGG + chr5.4:48744479-48744498 MS.gene89517:intron 40.0%
!!! CACAATACTTGTCGCTTTTG+AGG - chr5.4:48746486-48746505 None:intergenic 40.0%
!!! CTGTGCTATTTAGGGTTTTG+AGG + chr5.4:48743696-48743715 MS.gene89517:CDS 40.0%
!!! TTTAGGGTTTTGAGGCAACA+AGG + chr5.4:48743704-48743723 MS.gene89517:CDS 40.0%
AACTGCCTTATGCACGTCAT+AGG + chr5.4:48744514-48744533 MS.gene89517:CDS 45.0%
AAGAAAGTGACTCGTTTGGG+TGG - chr5.4:48744171-48744190 None:intergenic 45.0%
AAGCAGTTGCAATTCCCTTC+TGG - chr5.4:48746884-48746903 None:intergenic 45.0%
ACCAAGTTTAAGGACGAGGA+AGG + chr5.4:48744011-48744030 MS.gene89517:CDS 45.0%
AGAAGGGAATTGCAACTGCT+TGG + chr5.4:48746883-48746902 MS.gene89517:CDS 45.0%
AGATTTCTTTGCTTGGCGTC+AGG - chr5.4:48743281-48743300 None:intergenic 45.0%
ATAGCACAGCGAGAGAGTAA+AGG - chr5.4:48743685-48743704 None:intergenic 45.0%
CAGGTGGGATATTAGCATCT+TGG + chr5.4:48744819-48744838 MS.gene89517:intron 45.0%
CCAATTGAAGATGTTCTCCG+TGG - chr5.4:48746166-48746185 None:intergenic 45.0%
CCAATTGAGTTAAGCTCACG+AGG + chr5.4:48745029-48745048 MS.gene89517:intron 45.0%
CCACGGAGAACATCTTCAAT+TGG + chr5.4:48746163-48746182 MS.gene89517:CDS 45.0%
CCTCGTGAGCTTAACTCAAT+TGG - chr5.4:48745032-48745051 None:intergenic 45.0%
CTGCAAGAAAGTGACTCGTT+TGG - chr5.4:48744175-48744194 None:intergenic 45.0%
GAACTAATCACCGATGTCGA+AGG + chr5.4:48744047-48744066 MS.gene89517:CDS 45.0%
GAGCAGGAAATGAGGAAAGA+AGG + chr5.4:48744904-48744923 MS.gene89517:CDS 45.0%
GATTTCTTTGCTTGGCGTCA+GGG - chr5.4:48743280-48743299 None:intergenic 45.0%
GCTTAACATCCCTTCGACAT+CGG - chr5.4:48744060-48744079 None:intergenic 45.0%
GTTCACCAAGTTTAAGGACG+AGG + chr5.4:48744007-48744026 MS.gene89517:CDS 45.0%
TCCTTCCTCGTCCTTAAACT+TGG - chr5.4:48744015-48744034 None:intergenic 45.0%
! CCGTTTGCTCGAATAATGGA+TGG - chr5.4:48743415-48743434 None:intergenic 45.0%
! CGACAAGTATTGTGAAACGG+AGG + chr5.4:48746492-48746511 MS.gene89517:intron 45.0%
! GCTGCGGCACTAAGAATTTT+TGG - chr5.4:48746201-48746220 None:intergenic 45.0%
! GGATTGTCGAATGTTGCTTC+TGG + chr5.4:48744535-48744554 MS.gene89517:CDS 45.0%
! TAACCTGCAAAGATTGGCTG+CGG - chr5.4:48746217-48746236 None:intergenic 45.0%
!! ACTCTCTCGCTGTGCTATTT+AGG + chr5.4:48743687-48743706 MS.gene89517:CDS 45.0%
!! CTCTCTCGCTGTGCTATTTA+GGG + chr5.4:48743688-48743707 MS.gene89517:CDS 45.0%
!! AATATAATGAAATAATAAAT+GGG + chr5.4:48746384-48746403 MS.gene89517:intron 5.0%
!! TAATATAATGAAATAATAAA+TGG + chr5.4:48746383-48746402 MS.gene89517:intron 5.0%
!!! AACATTTTATTTTTAAATAT+AGG - chr5.4:48744787-48744806 None:intergenic 5.0%
!!! ACATTTTATTTTTAAATATA+GGG - chr5.4:48744786-48744805 None:intergenic 5.0%
!!! TTAATGTTTTATAAAATTAA+CGG + chr5.4:48743885-48743904 MS.gene89517:intron 5.0%
AGCCCCAGTATTCTCTAGCA+AGG + chr5.4:48744577-48744596 MS.gene89517:CDS 50.0%
CAAGAACTTGCCAAGGCTAG+AGG + chr5.4:48744229-48744248 MS.gene89517:CDS 50.0%
CTCTCCACAAGAACTTGCCA+AGG + chr5.4:48744222-48744241 MS.gene89517:CDS 50.0%
GGATGAAATTGTCTCCAGCG+AGG + chr5.4:48746239-48746258 MS.gene89517:CDS 50.0%
!! CTAGCCTTGGCAAGTTCTTG+TGG - chr5.4:48744229-48744248 None:intergenic 50.0%
GTGACTCGTTTGGGTGGCAA+TGG - chr5.4:48744165-48744184 None:intergenic 55.0%
TATCGTCGTGCCTCTAGCCT+TGG - chr5.4:48744242-48744261 None:intergenic 55.0%
! TTTGGGTGGCAATGGACTCG+AGG - chr5.4:48744157-48744176 None:intergenic 55.0%
GTGCCGCAGCCAATCTTTGC+AGG + chr5.4:48746211-48746230 MS.gene89517:CDS 60.0%
! GGCAATGGACTCGAGGTGAG+TGG - chr5.4:48744150-48744169 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 48743254 48747085 48743254 ID=MS.gene89517
chr5.4 mRNA 48743254 48747085 48743254 ID=MS.gene89517.t1;Parent=MS.gene89517
chr5.4 exon 48743254 48743361 48743254 ID=MS.gene89517.t1.exon1;Parent=MS.gene89517.t1
chr5.4 CDS 48743254 48743361 48743254 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
chr5.4 exon 48743464 48743743 48743464 ID=MS.gene89517.t1.exon2;Parent=MS.gene89517.t1
chr5.4 CDS 48743464 48743743 48743464 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
chr5.4 exon 48744003 48744375 48744003 ID=MS.gene89517.t1.exon3;Parent=MS.gene89517.t1
chr5.4 CDS 48744003 48744375 48744003 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
chr5.4 exon 48744485 48744703 48744485 ID=MS.gene89517.t1.exon4;Parent=MS.gene89517.t1
chr5.4 CDS 48744485 48744703 48744485 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
chr5.4 exon 48744822 48744960 48744822 ID=MS.gene89517.t1.exon5;Parent=MS.gene89517.t1
chr5.4 CDS 48744822 48744960 48744822 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
chr5.4 exon 48746012 48746260 48746012 ID=MS.gene89517.t1.exon6;Parent=MS.gene89517.t1
chr5.4 CDS 48746012 48746260 48746012 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
chr5.4 exon 48746792 48747085 48746792 ID=MS.gene89517.t1.exon7;Parent=MS.gene89517.t1
chr5.4 CDS 48746792 48747085 48746792 ID=cds.MS.gene89517.t1;Parent=MS.gene89517.t1
Gene Sequence

>MS.gene89517

ATGTCTACTGTAGCTTACTCTAACCCTGACGCCAAGCAAAGAAATCTTGCAGAATTTCACCCAAATGTCTGGGGAGAATATTTCATTCAATATGCTTCAGAATCGATGGTAAATATATATTGCTATTTCCACTAATTGGTTATGATATTATAAATGTTCCATCCATTATTCGAGCAAACGGTTAACCAGCTTATCTCTAATCATATGCAGGAACTTGATCAGAATATTGCAGCACAAATCGTTAAATTAAAAGATGAAGTGAGAAACATGCTTGTCTCAAAAACTGAGATGCCATTGGCAAAAGTTACCTTGATTGATTCAATATGTCGTCTCGGTGTTAGTTATCATTTTGAAAACGAGATTGACGAACTTTTGCAACATTTTCACAAGAGCTATGTTGAAAATGGAGAAATAGTTCTTGAAGACAGCCTTTACTCTCTCGCTGTGCTATTTAGGGTTTTGAGGCAACAAGGATTTTATGTTTCACCAAGTATATATCCATCCATGACTCAAACATATTTAATTTACATTTTTTTATTTCTTAATAAAAAAAAAAGATGTGAAAAACACTAAGATTATGATTTGTAAAAAAAAAAACAGTGAATAACCGATAAGTTAATTGGTTGAATTTTTAATGTTTTATAAAATTAACGGTTGAACTAGTTTATAAATATGAAATGATATAAAAATATTTAATTTTTTTTATGCAACTAATGACTGTTAATTTTTTTTTTTTATAAACACACTAGATGTGTTCACCAAGTTTAAGGACGAGGAAGGAAACTTTAATAAAGAACTAATCACCGATGTCGAAGGGATGTTAAGCTTGTATGAAGCCTCACATATGATTATTCATGGAGAGGAAATTTTGGAAGAGGCATTGGCTTTTACGTCCACTCACCTCGAGTCCATTGCCACCCAAACGAGTCACTTTCTTGCAGCACAAGTCAAATATGCTTTAAGACAGGCTCTCCACAAGAACTTGCCAAGGCTAGAGGCACGACGATACATTTCTATTTATGAACAAAATCCTTCGCATGATGAAATTCTACTCACTTTGGCGAAATTAGATTTTAATTTGCTCCAAAGCCTACATCAAAAAGAGTTTGGAAACATTTGCAAGTAAGTACTTCAATCACACACTTCGATTCTTTGTAACAAAACAAAATTAAAGTTATCATAAGGATAAATCCTGTTAATAACTTTTTTATATTGATTTTGATCTTTAAAGATGGTGGAAGGAGTTGGACTTCTCTAGTAAACTGCCTTATGCACGTCATAGGATTGTCGAATGTTGCTTCTGGATTTTGACCGCATATTTTGAGCCCCAGTATTCTCTAGCAAGGAAATTAGCGACGAAAGTAATCGCGATGTTATCAATCATTGATGATACATATGATGCATATGGAACCATTGATGAACTAGAACTTTTTACCAAGGCAATTCAAAGGTTGTTCATCATAAATTTATTAAACAAAAGAACTGGAACATATATTTACATTTCTCTCTTGCTTATAAAAAAAAAATTTCCCTATATTTAAAAATAAAATGTTAAAAGTGATTTTCAGGTGGGATATTAGCATCTTGGATGATCTTCCAGACTACATGAAATTAATTTATGAAACACTCTGGAATATTTTCGAAGAAATAGAGCAGGAAATGAGGAAAGAAGGAAAGCTTTATACCATGAAGTACTTTATAAAAGAAGTATGAGTTTGTGCCTTCTCTAATTAATTATTAGCAACAAAACATGAGCCATAACTTTTTTTTTTCTACCAATTGAGTTAAGCTCACGAGGACATCCATAACTTATTTATACATATAAGTATCCTTTTTATAAGAGCAAAGATAATTTATATTAATAAGAACAATCAATAACAACACAAAATTGTATTGATTTTAATTATACTCTTTTGTCTTAACCCTCATATTCTTAGGGGGATAGTGAGTTGATAATCAAGAGCTGATTAAGAATTGCAGATTATTAAAGAGGATTTCGAAGGATTCCTCCTTAAATCAATCTCATTAATCACTTAAGACCACACAATTAATAAAAGGGAAATGTTAATAGATGCATTTGGGATATTGTTTAAGCAACTAAAAATAGTAATTTTTGCATAGAAATTATTGTGTACAATTATTAGTTTTACATGTGTTTGACTTATGTTTTTAAGATAAAATTTCTTTTAATGGATTCCTTAAACAATATCCTTAGGGCACTTGTTAGCATAACTCTTAATTAAATGTTTCTCCTTTCTTTAACTACAAGTGGTTGAATTTGCTTAACTCAACTAGTATTAAACATGGTTACGTTGTCATTTATGTTTGTTTCTTTTTAACGCAGTCATTTATGTTTCTTAAATATTGAATGTCGTTAGTTTAGCCTTTTAGGAGTGAAAGTTCATGCAAAAGTTTAGGAGCAAACTCTCTCAGCCTTTATTTGGTTGGAAACAAATCAAATTTTAAATTTGTGAAGGAATTTTTGTTACACAAAAATTGTGATGTTAAGAAACTTAACATTACTTTTGTACATTTAAGAGAGATCAAATTACACTTACTTGAGTACTGTCGTCGTTGATAAATTTATCAATTTGGGTGCATTTACTATAAAATTCATGGAGTTCAAGTTTATATCTATGCAATTAGTATGTAAACTGAATTACGATGTGAAAGAAGTATGATTTTTCATTATTAATCATTAAGAAATGAGTTTCTTCGTAATTCTATTGTTTTACTAATTGTCTGTTCGTGATGGCAGATAAAAGTGACAGTCCAAGGTTTTATTACTGAGGCCAGATGGTTGAACGAAAACTATATACCAACTATAGAAGAGTACATGCACAAATCAACAAAATCATGTTGTTACACTTTGTTGATATTAACTTCTTACATTGGAATGGGAGAAAATACCACGGAGAACATCTTCAATTGGGTAACAAATGACCCAAAAATTCTTAGTGCCGCAGCCAATCTTTGCAGGTTAATGGATGAAATTGTCTCCAGCGAGGTATTTAAAATATATCCAAAAAAATTATCTGTAATACACTCATTCCGTTTCATAATACATGTCGCTTTTGAAGAATAATTTTGTTTCATAATACCCTTACTTATTTATTGTAGAGAGATAAATAATATAATGAAATAATAAATGGGTAAGGTTATTATAGAAAAAACATAGAATTTCATCAAAAATAACAAAATTTATTTGATTTATTGGTATGTGTAACTTCCTCAAAAGCGACAAGTATTGTGAAACGGAGGGAGTACTATTTATTTTATGGGAAATGCTAGCATGTATCCAGATATTAAGGATTCCATTAGTAGAAATTATGTTTGAAATTTTATATTAATTTCAATAAAAGTAGAACATTTTTTTTTTGGAGAATGCTAATAAATGCCCTTGAGACTATGTTAATAAATACTTTCTATTAATTTTAATAGAAACTTTAACGTGTATCCTTAGAATACATGTTATCATGACTCTTATTTTATTTCACAGGATATAAATACTCACATTAATTTTTTTTTTGGTGTACAGTTCGAGCAAAAAAGAAAACATGTTTGCTCATTGTTGGATTGCTACATGAAGGAGTATGATATGTCTAGGGAAGCTGCTATTCAAGAATGCCAGAAGGGAATTGCAACTGCTTGGAAAGATATAAATGAGGAATGTCTTAGGCCAACCAAAGTTCCAATGCCTTTTCTTATTCGTGCTCTCAATTTTTCGCGTTTTATTGATGTGATTTACAAAGATAACGACAATTACACCCATTCTCAAGGACTTATGAAGGTGTATATCAAAGAAGTCCTTGTTGATCGTGTTCCAATTTAA
Protein sequence

>MS.gene89517.t1

MSTVAYSNPDAKQRNLAEFHPNVWGEYFIQYASESMELDQNIAAQIVKLKDEVRNMLVSKTEMPLAKVTLIDSICRLGVSYHFENEIDELLQHFHKSYVENGEIVLEDSLYSLAVLFRVLRQQGFYVSPNVFTKFKDEEGNFNKELITDVEGMLSLYEASHMIIHGEEILEEALAFTSTHLESIATQTSHFLAAQVKYALRQALHKNLPRLEARRYISIYEQNPSHDEILLTLAKLDFNLLQSLHQKEFGNICKWWKELDFSSKLPYARHRIVECCFWILTAYFEPQYSLARKLATKVIAMLSIIDDTYDAYGTIDELELFTKAIQRWDISILDDLPDYMKLIYETLWNIFEEIEQEMRKEGKLYTMKYFIKEIKVTVQGFITEARWLNENYIPTIEEYMHKSTKSCCYTLLILTSYIGMGENTTENIFNWVTNDPKILSAAANLCRLMDEIVSSEFEQKRKHVCSLLDCYMKEYDMSREAAIQECQKGIATAWKDINEECLRPTKVPMPFLIRALNFSRFIDVIYKDNDNYTHSQGLMKVYIKEVLVDRVPI