Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89609.t1 | XP_003629389.1 | 98.8 | 332 | 4 | 0 | 1 | 332 | 1 | 332 | 4.50E-187 | 663.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89609.t1 | Q9FJZ9 | 76.3 | 333 | 76 | 2 | 1 | 330 | 1 | 333 | 1.1e-144 | 514.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89609.t1 | G7LDV0 | 98.8 | 332 | 4 | 0 | 1 | 332 | 1 | 332 | 3.3e-187 | 663.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene068824 | MS.gene89609 | PPI |
MS.gene068826 | MS.gene89609 | PPI |
MS.gene053958 | MS.gene89609 | PPI |
MS.gene09669 | MS.gene89609 | PPI |
MS.gene059685 | MS.gene89609 | PPI |
MS.gene068822 | MS.gene89609 | PPI |
MS.gene78768 | MS.gene89609 | PPI |
MS.gene015325 | MS.gene89609 | PPI |
MS.gene21483 | MS.gene89609 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89609.t1 | MTR_8g076820 | 98.795 | 332 | 4 | 0 | 1 | 332 | 1 | 332 | 0.0 | 683 |
MS.gene89609.t1 | MTR_5g021060 | 81.818 | 330 | 60 | 0 | 1 | 330 | 1 | 330 | 0.0 | 555 |
MS.gene89609.t1 | MTR_1g022970 | 62.583 | 302 | 112 | 1 | 30 | 330 | 46 | 347 | 4.08e-132 | 380 |
MS.gene89609.t1 | MTR_5g014100 | 55.031 | 318 | 129 | 5 | 23 | 330 | 18 | 331 | 6.49e-116 | 338 |
MS.gene89609.t1 | MTR_3g072190 | 56.146 | 301 | 124 | 2 | 30 | 330 | 26 | 318 | 7.63e-110 | 322 |
MS.gene89609.t1 | MTR_4g029170 | 51.506 | 332 | 148 | 5 | 1 | 330 | 1 | 321 | 1.37e-108 | 319 |
MS.gene89609.t1 | MTR_2g084080 | 48.788 | 330 | 156 | 3 | 1 | 330 | 1 | 317 | 1.46e-108 | 319 |
MS.gene89609.t1 | MTR_2g084000 | 47.576 | 330 | 162 | 2 | 1 | 330 | 1 | 319 | 2.58e-108 | 318 |
MS.gene89609.t1 | MTR_7g093370 | 49.080 | 326 | 160 | 3 | 7 | 330 | 50 | 371 | 3.40e-108 | 320 |
MS.gene89609.t1 | MTR_2g040000 | 52.244 | 312 | 143 | 2 | 24 | 331 | 23 | 332 | 6.01e-108 | 318 |
MS.gene89609.t1 | MTR_4g122640 | 50.492 | 305 | 147 | 2 | 27 | 330 | 35 | 336 | 2.48e-107 | 317 |
MS.gene89609.t1 | MTR_2g084020 | 48.428 | 318 | 157 | 1 | 13 | 330 | 8 | 318 | 4.68e-107 | 315 |
MS.gene89609.t1 | MTR_2g029820 | 47.130 | 331 | 169 | 2 | 2 | 331 | 6 | 331 | 1.58e-106 | 315 |
MS.gene89609.t1 | MTR_2g029830 | 50.165 | 303 | 150 | 1 | 30 | 331 | 28 | 330 | 2.07e-106 | 315 |
MS.gene89609.t1 | MTR_2g029800 | 49.835 | 303 | 151 | 1 | 30 | 331 | 29 | 331 | 2.49e-106 | 315 |
MS.gene89609.t1 | MTR_4g029180 | 54.181 | 299 | 127 | 4 | 34 | 330 | 31 | 321 | 5.50e-106 | 313 |
MS.gene89609.t1 | MTR_2g029560 | 47.826 | 322 | 166 | 2 | 11 | 330 | 4 | 325 | 1.05e-105 | 313 |
MS.gene89609.t1 | MTR_7g072510 | 49.682 | 314 | 149 | 3 | 18 | 330 | 7 | 312 | 1.68e-105 | 311 |
MS.gene89609.t1 | MTR_3g466200 | 50.987 | 304 | 138 | 4 | 30 | 330 | 25 | 320 | 1.69e-105 | 311 |
MS.gene89609.t1 | MTR_2g084010 | 50.166 | 301 | 143 | 1 | 30 | 330 | 25 | 318 | 1.88e-105 | 311 |
MS.gene89609.t1 | MTR_4g083710 | 48.024 | 329 | 154 | 4 | 5 | 330 | 10 | 324 | 1.99e-105 | 311 |
MS.gene89609.t1 | MTR_2g029815 | 46.526 | 331 | 171 | 2 | 2 | 331 | 6 | 331 | 3.79e-105 | 312 |
MS.gene89609.t1 | MTR_2g084110 | 49.057 | 318 | 154 | 2 | 13 | 330 | 8 | 317 | 4.21e-105 | 310 |
MS.gene89609.t1 | MTR_2g028980 | 48.466 | 326 | 163 | 3 | 6 | 330 | 9 | 330 | 5.13e-105 | 311 |
MS.gene89609.t1 | MTR_5g083860 | 51.815 | 303 | 136 | 3 | 30 | 330 | 31 | 325 | 1.17e-104 | 310 |
MS.gene89609.t1 | MTR_2g029730 | 47.500 | 320 | 166 | 2 | 13 | 330 | 7 | 326 | 1.28e-104 | 310 |
MS.gene89609.t1 | MTR_5g074860 | 48.936 | 329 | 149 | 6 | 5 | 329 | 11 | 324 | 1.63e-104 | 309 |
MS.gene89609.t1 | MTR_1g054205 | 50.645 | 310 | 144 | 3 | 30 | 330 | 17 | 326 | 2.75e-104 | 309 |
MS.gene89609.t1 | MTR_2g029740 | 49.342 | 304 | 153 | 1 | 28 | 330 | 27 | 330 | 1.06e-103 | 308 |
MS.gene89609.t1 | MTR_2g029910 | 48.318 | 327 | 160 | 3 | 14 | 331 | 7 | 333 | 3.86e-103 | 306 |
MS.gene89609.t1 | MTR_3g094650 | 48.276 | 319 | 155 | 3 | 11 | 327 | 9 | 319 | 8.30e-103 | 305 |
MS.gene89609.t1 | MTR_2g029750 | 47.706 | 327 | 164 | 2 | 11 | 330 | 4 | 330 | 1.77e-102 | 305 |
MS.gene89609.t1 | MTR_2g029860 | 49.669 | 302 | 151 | 1 | 30 | 330 | 29 | 330 | 5.02e-102 | 304 |
MS.gene89609.t1 | MTR_4g125940 | 50.000 | 314 | 152 | 2 | 21 | 331 | 19 | 330 | 1.71e-101 | 301 |
MS.gene89609.t1 | MTR_2g084090 | 50.000 | 302 | 142 | 3 | 30 | 330 | 25 | 318 | 2.29e-101 | 301 |
MS.gene89609.t1 | MTR_5g074760 | 51.475 | 305 | 136 | 5 | 30 | 330 | 25 | 321 | 5.42e-101 | 300 |
MS.gene89609.t1 | MTR_5g074970 | 50.814 | 307 | 139 | 4 | 28 | 330 | 28 | 326 | 3.53e-100 | 298 |
MS.gene89609.t1 | MTR_3g094670 | 49.689 | 322 | 152 | 3 | 11 | 330 | 9 | 322 | 4.43e-100 | 298 |
MS.gene89609.t1 | MTR_5g074740 | 51.148 | 305 | 137 | 5 | 30 | 330 | 25 | 321 | 1.00e-99 | 297 |
MS.gene89609.t1 | MTR_2g029850 | 50.336 | 298 | 147 | 1 | 34 | 330 | 33 | 330 | 1.05e-99 | 298 |
MS.gene89609.t1 | MTR_3g094630 | 50.000 | 322 | 151 | 3 | 11 | 330 | 9 | 322 | 1.21e-98 | 294 |
MS.gene89609.t1 | MTR_4g074995 | 46.364 | 330 | 147 | 5 | 4 | 330 | 6 | 308 | 4.28e-98 | 292 |
MS.gene89609.t1 | MTR_5g074710 | 50.492 | 305 | 139 | 5 | 30 | 330 | 25 | 321 | 1.28e-97 | 291 |
MS.gene89609.t1 | MTR_7g026990 | 49.180 | 305 | 146 | 3 | 26 | 330 | 27 | 322 | 2.52e-97 | 291 |
MS.gene89609.t1 | MTR_5g017850 | 47.432 | 331 | 165 | 4 | 1 | 330 | 4 | 326 | 2.66e-97 | 291 |
MS.gene89609.t1 | MTR_4g031140 | 47.508 | 301 | 154 | 3 | 30 | 330 | 28 | 324 | 1.07e-96 | 290 |
MS.gene89609.t1 | MTR_7g072480 | 48.243 | 313 | 151 | 5 | 19 | 330 | 14 | 316 | 1.35e-96 | 289 |
MS.gene89609.t1 | MTR_5g017860 | 46.526 | 331 | 168 | 4 | 1 | 330 | 4 | 326 | 6.87e-96 | 287 |
MS.gene89609.t1 | MTR_4g030890 | 48.185 | 303 | 153 | 3 | 28 | 330 | 98 | 396 | 5.24e-95 | 288 |
MS.gene89609.t1 | MTR_3g466180 | 47.531 | 324 | 153 | 3 | 7 | 330 | 17 | 323 | 7.60e-95 | 285 |
MS.gene89609.t1 | MTR_4g125940 | 52.536 | 276 | 126 | 2 | 59 | 331 | 2 | 275 | 2.57e-94 | 281 |
MS.gene89609.t1 | MTR_5g049280 | 46.053 | 304 | 156 | 5 | 34 | 331 | 37 | 338 | 3.03e-94 | 283 |
MS.gene89609.t1 | MTR_4g029190 | 48.366 | 306 | 147 | 4 | 28 | 330 | 43 | 340 | 3.19e-94 | 283 |
MS.gene89609.t1 | MTR_4g029200 | 46.865 | 303 | 153 | 2 | 28 | 330 | 44 | 338 | 3.76e-94 | 283 |
MS.gene89609.t1 | MTR_4g074990 | 45.732 | 328 | 145 | 5 | 6 | 330 | 8 | 305 | 9.55e-93 | 278 |
MS.gene89609.t1 | MTR_3g467600 | 45.652 | 322 | 162 | 5 | 13 | 330 | 12 | 324 | 3.07e-91 | 275 |
MS.gene89609.t1 | MTR_1g115900 | 45.048 | 313 | 162 | 3 | 20 | 330 | 17 | 321 | 5.48e-91 | 275 |
MS.gene89609.t1 | MTR_3g072190 | 55.426 | 258 | 107 | 2 | 73 | 330 | 2 | 251 | 1.06e-90 | 271 |
MS.gene89609.t1 | MTR_2g088770 | 44.411 | 331 | 175 | 4 | 1 | 330 | 3 | 325 | 3.93e-89 | 270 |
MS.gene89609.t1 | MTR_3g092990 | 47.213 | 305 | 159 | 2 | 28 | 331 | 24 | 327 | 8.12e-89 | 269 |
MS.gene89609.t1 | MTR_2g029830 | 50.388 | 258 | 127 | 1 | 75 | 331 | 5 | 262 | 1.62e-87 | 265 |
MS.gene89609.t1 | MTR_4g133800 | 45.791 | 297 | 151 | 6 | 35 | 330 | 46 | 333 | 7.40e-86 | 262 |
MS.gene89609.t1 | MTR_4g046713 | 45.033 | 302 | 163 | 3 | 30 | 330 | 27 | 326 | 1.74e-84 | 258 |
MS.gene89609.t1 | MTR_7g107520 | 43.865 | 326 | 175 | 5 | 5 | 330 | 3 | 320 | 1.67e-82 | 253 |
MS.gene89609.t1 | MTR_4g074980 | 42.462 | 325 | 149 | 6 | 6 | 330 | 8 | 294 | 8.47e-82 | 250 |
MS.gene89609.t1 | MTR_1g038680 | 44.518 | 301 | 162 | 5 | 34 | 330 | 33 | 332 | 2.66e-80 | 248 |
MS.gene89609.t1 | MTR_4g074980 | 48.263 | 259 | 118 | 4 | 6 | 261 | 8 | 253 | 2.80e-80 | 245 |
MS.gene89609.t1 | MTR_1g101830 | 43.564 | 303 | 162 | 7 | 30 | 330 | 27 | 322 | 1.42e-79 | 245 |
MS.gene89609.t1 | MTR_2g008710 | 44.186 | 301 | 158 | 5 | 34 | 330 | 31 | 325 | 2.90e-78 | 242 |
MS.gene89609.t1 | MTR_5g074860 | 41.641 | 329 | 134 | 6 | 5 | 329 | 11 | 285 | 3.08e-78 | 241 |
MS.gene89609.t1 | MTR_2g437770 | 43.667 | 300 | 158 | 6 | 34 | 332 | 54 | 343 | 1.79e-77 | 241 |
MS.gene89609.t1 | MTR_5g022870 | 41.515 | 330 | 179 | 6 | 1 | 330 | 1 | 316 | 3.88e-77 | 239 |
MS.gene89609.t1 | MTR_3g092990 | 44.918 | 305 | 155 | 3 | 28 | 331 | 24 | 316 | 1.60e-76 | 238 |
MS.gene89609.t1 | MTR_0155s0040 | 40.000 | 330 | 183 | 7 | 1 | 330 | 1 | 315 | 1.70e-75 | 235 |
MS.gene89609.t1 | MTR_8g075100 | 41.118 | 304 | 172 | 5 | 27 | 330 | 23 | 319 | 3.59e-75 | 234 |
MS.gene89609.t1 | MTR_1g086490 | 42.532 | 308 | 165 | 4 | 34 | 330 | 34 | 340 | 4.34e-75 | 234 |
MS.gene89609.t1 | MTR_1g086320 | 42.193 | 301 | 169 | 3 | 34 | 330 | 34 | 333 | 9.28e-75 | 233 |
MS.gene89609.t1 | MTR_4g114210 | 41.791 | 335 | 175 | 7 | 1 | 330 | 1 | 320 | 9.68e-74 | 230 |
MS.gene89609.t1 | MTR_1g077000 | 38.788 | 330 | 186 | 6 | 1 | 330 | 14 | 327 | 8.81e-73 | 228 |
MS.gene89609.t1 | MTR_1g025980 | 39.514 | 329 | 187 | 5 | 1 | 329 | 1 | 317 | 9.22e-73 | 228 |
MS.gene89609.t1 | MTR_7g086820 | 40.741 | 297 | 168 | 6 | 34 | 330 | 24 | 312 | 5.64e-72 | 226 |
MS.gene89609.t1 | MTR_7g086870 | 39.933 | 298 | 168 | 5 | 34 | 331 | 26 | 312 | 6.40e-72 | 226 |
MS.gene89609.t1 | MTR_6g027440 | 38.838 | 327 | 186 | 7 | 5 | 330 | 1 | 314 | 4.49e-71 | 224 |
MS.gene89609.t1 | MTR_5g016010 | 39.692 | 325 | 191 | 4 | 8 | 329 | 6 | 328 | 6.18e-71 | 223 |
MS.gene89609.t1 | MTR_8g062780 | 39.319 | 323 | 189 | 4 | 10 | 330 | 7 | 324 | 1.59e-70 | 223 |
MS.gene89609.t1 | MTR_1g066710 | 39.739 | 307 | 173 | 5 | 28 | 330 | 25 | 323 | 1.94e-70 | 222 |
MS.gene89609.t1 | MTR_6g043280 | 38.710 | 310 | 179 | 6 | 23 | 331 | 34 | 333 | 2.44e-68 | 217 |
MS.gene89609.t1 | MTR_1g066380 | 39.216 | 306 | 176 | 4 | 28 | 330 | 25 | 323 | 2.58e-67 | 214 |
MS.gene89609.t1 | MTR_7g029030 | 39.404 | 302 | 176 | 4 | 30 | 330 | 25 | 320 | 2.84e-66 | 211 |
MS.gene89609.t1 | MTR_1g009750 | 38.973 | 331 | 193 | 6 | 4 | 330 | 3 | 328 | 5.32e-66 | 211 |
MS.gene89609.t1 | MTR_2g067440 | 37.500 | 336 | 176 | 7 | 27 | 331 | 57 | 389 | 6.39e-66 | 213 |
MS.gene89609.t1 | MTR_4g087965 | 40.604 | 298 | 171 | 6 | 34 | 326 | 46 | 342 | 9.87e-66 | 211 |
MS.gene89609.t1 | MTR_6g043240 | 37.838 | 333 | 185 | 8 | 6 | 330 | 13 | 331 | 3.14e-65 | 209 |
MS.gene89609.t1 | MTR_4g132490 | 36.111 | 324 | 203 | 3 | 8 | 330 | 7 | 327 | 6.56e-65 | 208 |
MS.gene89609.t1 | MTR_1g066640 | 38.562 | 306 | 178 | 4 | 28 | 330 | 25 | 323 | 9.84e-65 | 207 |
MS.gene89609.t1 | MTR_1g090760 | 36.036 | 333 | 201 | 6 | 1 | 330 | 7 | 330 | 1.22e-64 | 207 |
MS.gene89609.t1 | MTR_2g078610 | 36.446 | 332 | 177 | 6 | 27 | 326 | 73 | 402 | 1.56e-64 | 209 |
MS.gene89609.t1 | MTR_2g008160 | 41.100 | 309 | 169 | 6 | 28 | 330 | 22 | 323 | 1.63e-64 | 207 |
MS.gene89609.t1 | MTR_2g077990 | 36.446 | 332 | 177 | 6 | 27 | 326 | 73 | 402 | 5.00e-64 | 208 |
MS.gene89609.t1 | MTR_4g127670 | 38.721 | 297 | 173 | 4 | 34 | 326 | 28 | 319 | 1.85e-63 | 204 |
MS.gene89609.t1 | MTR_1g066680 | 38.835 | 309 | 177 | 6 | 26 | 330 | 22 | 322 | 2.87e-63 | 204 |
MS.gene89609.t1 | MTR_4g095450 | 38.535 | 314 | 184 | 4 | 19 | 329 | 16 | 323 | 2.88e-63 | 204 |
MS.gene89609.t1 | MTR_2g099175 | 36.152 | 343 | 191 | 8 | 5 | 330 | 4 | 335 | 4.87e-63 | 203 |
MS.gene89609.t1 | MTR_3g105790 | 39.667 | 300 | 172 | 4 | 34 | 330 | 29 | 322 | 6.77e-63 | 202 |
MS.gene89609.t1 | MTR_6g043460 | 38.514 | 296 | 168 | 7 | 34 | 326 | 40 | 324 | 4.49e-62 | 201 |
MS.gene89609.t1 | MTR_2g078280 | 36.646 | 322 | 170 | 7 | 27 | 316 | 73 | 392 | 9.48e-60 | 197 |
MS.gene89609.t1 | MTR_0286s0010 | 36.601 | 306 | 188 | 5 | 28 | 330 | 32 | 334 | 1.48e-58 | 192 |
MS.gene89609.t1 | MTR_6g008075 | 36.601 | 306 | 188 | 5 | 28 | 330 | 32 | 334 | 1.48e-58 | 192 |
MS.gene89609.t1 | MTR_4g132110 | 34.615 | 338 | 203 | 7 | 1 | 330 | 1 | 328 | 1.59e-58 | 192 |
MS.gene89609.t1 | MTR_5g074700 | 45.064 | 233 | 104 | 6 | 101 | 330 | 3 | 214 | 1.32e-57 | 186 |
MS.gene89609.t1 | MTR_4g132110 | 34.111 | 343 | 203 | 8 | 1 | 330 | 1 | 333 | 3.91e-56 | 186 |
MS.gene89609.t1 | MTR_2g008730 | 37.542 | 301 | 154 | 5 | 34 | 330 | 31 | 301 | 4.59e-56 | 184 |
MS.gene89609.t1 | MTR_3g072210 | 51.309 | 191 | 85 | 2 | 141 | 330 | 55 | 238 | 5.77e-56 | 182 |
MS.gene89609.t1 | MTR_2g067450 | 36.538 | 312 | 184 | 7 | 27 | 331 | 8 | 312 | 7.08e-56 | 184 |
MS.gene89609.t1 | MTR_1g066380 | 38.846 | 260 | 149 | 4 | 74 | 330 | 3 | 255 | 1.08e-55 | 182 |
MS.gene89609.t1 | MTR_5g033470 | 35.922 | 309 | 188 | 5 | 29 | 330 | 72 | 377 | 1.14e-54 | 183 |
MS.gene89609.t1 | MTR_1g009750 | 35.562 | 329 | 190 | 7 | 4 | 330 | 3 | 311 | 1.44e-53 | 178 |
MS.gene89609.t1 | MTR_2g008160 | 37.217 | 309 | 146 | 6 | 28 | 330 | 22 | 288 | 4.47e-52 | 174 |
MS.gene89609.t1 | MTR_7g072490 | 41.102 | 236 | 77 | 3 | 76 | 311 | 2 | 175 | 2.29e-45 | 154 |
MS.gene89609.t1 | MTR_0147s0010 | 32.907 | 313 | 175 | 4 | 34 | 326 | 81 | 378 | 2.47e-45 | 159 |
MS.gene89609.t1 | MTR_3g105790 | 40.167 | 239 | 138 | 3 | 95 | 330 | 10 | 246 | 1.42e-44 | 153 |
MS.gene89609.t1 | MTR_2g029880 | 43.299 | 194 | 97 | 3 | 140 | 331 | 7 | 189 | 2.74e-44 | 151 |
MS.gene89609.t1 | MTR_2g008160 | 47.126 | 174 | 84 | 4 | 28 | 199 | 22 | 189 | 4.09e-43 | 148 |
MS.gene89609.t1 | MTR_3g072260 | 64.220 | 109 | 39 | 0 | 30 | 138 | 26 | 134 | 1.58e-41 | 142 |
MS.gene89609.t1 | MTR_2g078560 | 30.942 | 223 | 122 | 4 | 135 | 326 | 95 | 316 | 1.41e-29 | 115 |
MS.gene89609.t1 | MTR_2g077980 | 28.417 | 278 | 159 | 8 | 92 | 331 | 11 | 286 | 3.18e-25 | 103 |
MS.gene89609.t1 | MTR_1g089005 | 41.304 | 138 | 69 | 3 | 11 | 142 | 1 | 132 | 1.57e-24 | 97.8 |
MS.gene89609.t1 | MTR_3g462850 | 40.278 | 144 | 78 | 5 | 194 | 331 | 9 | 150 | 7.48e-24 | 95.9 |
MS.gene89609.t1 | MTR_7g086790 | 35.979 | 189 | 99 | 6 | 77 | 265 | 17 | 183 | 6.35e-23 | 94.7 |
MS.gene89609.t1 | MTR_4g031040 | 36.571 | 175 | 67 | 3 | 89 | 263 | 1 | 131 | 1.98e-21 | 89.0 |
MS.gene89609.t1 | MTR_6g048160 | 60.563 | 71 | 24 | 2 | 69 | 139 | 22 | 88 | 9.10e-21 | 85.9 |
MS.gene89609.t1 | MTR_5g058120 | 34.756 | 164 | 91 | 5 | 165 | 326 | 6 | 155 | 1.11e-18 | 84.3 |
MS.gene89609.t1 | MTR_5g074770 | 46.667 | 90 | 46 | 2 | 241 | 329 | 20 | 108 | 1.51e-18 | 80.1 |
MS.gene89609.t1 | MTR_4g114220 | 52.439 | 82 | 29 | 2 | 56 | 137 | 29 | 100 | 1.66e-18 | 81.3 |
MS.gene89609.t1 | MTR_7g086810 | 34.711 | 121 | 53 | 1 | 28 | 148 | 4 | 98 | 4.33e-18 | 82.4 |
MS.gene89609.t1 | MTR_3g107060 | 28.464 | 267 | 116 | 9 | 61 | 311 | 105 | 312 | 5.56e-16 | 77.8 |
MS.gene89609.t1 | MTR_1g098320 | 43.038 | 79 | 44 | 1 | 252 | 330 | 47 | 124 | 5.61e-16 | 74.3 |
MS.gene89609.t1 | MTR_4g012865 | 53.846 | 65 | 30 | 0 | 33 | 97 | 80 | 144 | 1.13e-15 | 73.6 |
MS.gene89609.t1 | MTR_2g029930 | 41.860 | 86 | 25 | 2 | 34 | 108 | 23 | 94 | 9.30e-15 | 69.7 |
MS.gene89609.t1 | MTR_7g086785 | 45.946 | 74 | 39 | 1 | 75 | 148 | 3 | 75 | 3.41e-14 | 69.3 |
MS.gene89609.t1 | MTR_7g107500 | 48.052 | 77 | 38 | 2 | 254 | 330 | 23 | 97 | 3.06e-13 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89609.t1 | AT5G66390 | 76.276 | 333 | 76 | 2 | 1 | 330 | 1 | 333 | 0.0 | 531 |
MS.gene89609.t1 | AT4G36430 | 68.278 | 331 | 105 | 0 | 1 | 331 | 1 | 331 | 5.56e-165 | 463 |
MS.gene89609.t1 | AT2G18150 | 66.369 | 336 | 107 | 1 | 1 | 330 | 1 | 336 | 1.95e-164 | 462 |
MS.gene89609.t1 | AT3G50990 | 65.244 | 328 | 109 | 1 | 8 | 330 | 14 | 341 | 1.69e-154 | 437 |
MS.gene89609.t1 | AT2G18140 | 61.493 | 335 | 124 | 1 | 1 | 330 | 1 | 335 | 3.88e-149 | 423 |
MS.gene89609.t1 | AT1G44970 | 64.474 | 304 | 107 | 1 | 28 | 330 | 43 | 346 | 4.45e-138 | 395 |
MS.gene89609.t1 | AT2G35380 | 54.662 | 311 | 132 | 3 | 27 | 330 | 27 | 335 | 1.32e-112 | 330 |
MS.gene89609.t1 | AT4G08780 | 53.443 | 305 | 139 | 2 | 30 | 331 | 24 | 328 | 1.58e-110 | 325 |
MS.gene89609.t1 | AT4G08770 | 53.443 | 305 | 139 | 2 | 30 | 331 | 24 | 328 | 6.72e-110 | 324 |
MS.gene89609.t1 | AT5G06720 | 52.649 | 302 | 142 | 1 | 30 | 330 | 32 | 333 | 1.21e-109 | 323 |
MS.gene89609.t1 | AT3G49110 | 50.311 | 322 | 157 | 2 | 13 | 331 | 16 | 337 | 8.88e-107 | 316 |
MS.gene89609.t1 | AT3G32980 | 51.111 | 315 | 150 | 3 | 21 | 331 | 21 | 335 | 2.85e-106 | 315 |
MS.gene89609.t1 | AT3G49120 | 51.623 | 308 | 146 | 2 | 27 | 331 | 29 | 336 | 1.18e-104 | 311 |
MS.gene89609.t1 | AT2G38390 | 50.825 | 303 | 147 | 2 | 30 | 330 | 31 | 333 | 1.30e-104 | 310 |
MS.gene89609.t1 | AT5G06730 | 50.000 | 302 | 150 | 1 | 30 | 330 | 33 | 334 | 2.46e-104 | 310 |
MS.gene89609.t1 | AT5G05340 | 50.165 | 303 | 141 | 3 | 30 | 330 | 30 | 324 | 3.02e-103 | 306 |
MS.gene89609.t1 | AT5G19890 | 50.779 | 321 | 149 | 4 | 13 | 330 | 13 | 327 | 3.14e-102 | 303 |
MS.gene89609.t1 | AT1G14550 | 47.416 | 329 | 159 | 4 | 4 | 330 | 5 | 321 | 5.74e-101 | 300 |
MS.gene89609.t1 | AT2G38380 | 49.835 | 303 | 150 | 2 | 30 | 330 | 31 | 333 | 6.98e-99 | 296 |
MS.gene89609.t1 | AT4G16270 | 50.000 | 298 | 145 | 3 | 34 | 330 | 54 | 348 | 1.02e-98 | 295 |
MS.gene89609.t1 | AT5G58400 | 49.342 | 304 | 143 | 4 | 30 | 330 | 30 | 325 | 2.07e-98 | 294 |
MS.gene89609.t1 | AT1G49570 | 52.189 | 297 | 138 | 3 | 33 | 326 | 51 | 346 | 4.67e-98 | 294 |
MS.gene89609.t1 | AT2G22420 | 48.684 | 304 | 152 | 3 | 27 | 330 | 20 | 319 | 6.41e-98 | 293 |
MS.gene89609.t1 | AT5G58390 | 47.706 | 327 | 152 | 5 | 7 | 330 | 6 | 316 | 5.85e-97 | 290 |
MS.gene89609.t1 | AT1G14540 | 43.210 | 324 | 169 | 2 | 7 | 330 | 7 | 315 | 5.20e-92 | 277 |
MS.gene89609.t1 | AT1G68850 | 44.554 | 303 | 163 | 3 | 34 | 331 | 34 | 336 | 4.65e-91 | 275 |
MS.gene89609.t1 | AT3G03670 | 43.465 | 329 | 170 | 5 | 6 | 330 | 5 | 321 | 9.13e-89 | 269 |
MS.gene89609.t1 | AT1G05260 | 45.545 | 303 | 162 | 3 | 30 | 331 | 26 | 326 | 7.95e-87 | 264 |
MS.gene89609.t1 | AT4G11290 | 41.896 | 327 | 183 | 2 | 5 | 330 | 6 | 326 | 1.99e-85 | 261 |
MS.gene89609.t1 | AT2G35380 | 53.012 | 249 | 108 | 3 | 89 | 330 | 1 | 247 | 6.23e-84 | 254 |
MS.gene89609.t1 | AT5G19880 | 42.202 | 327 | 179 | 4 | 8 | 330 | 9 | 329 | 8.28e-84 | 256 |
MS.gene89609.t1 | AT5G15180 | 43.711 | 318 | 170 | 4 | 13 | 330 | 21 | 329 | 5.64e-83 | 254 |
MS.gene89609.t1 | AT3G21770 | 44.667 | 300 | 163 | 3 | 30 | 328 | 29 | 326 | 1.62e-81 | 251 |
MS.gene89609.t1 | AT5G64120 | 43.434 | 297 | 161 | 5 | 34 | 330 | 39 | 328 | 2.92e-81 | 250 |
MS.gene89609.t1 | AT1G71695 | 41.716 | 338 | 179 | 7 | 5 | 331 | 10 | 340 | 1.23e-80 | 249 |
MS.gene89609.t1 | AT5G17820 | 39.697 | 330 | 182 | 6 | 1 | 330 | 1 | 313 | 8.46e-79 | 243 |
MS.gene89609.t1 | AT5G17820 | 39.697 | 330 | 182 | 6 | 1 | 330 | 54 | 366 | 1.05e-77 | 242 |
MS.gene89609.t1 | AT5G42180 | 44.333 | 300 | 161 | 4 | 30 | 329 | 23 | 316 | 1.37e-77 | 240 |
MS.gene89609.t1 | AT5G51890 | 39.458 | 332 | 187 | 7 | 1 | 330 | 3 | 322 | 3.20e-76 | 237 |
MS.gene89609.t1 | AT3G01190 | 43.098 | 297 | 164 | 4 | 34 | 330 | 30 | 321 | 6.63e-76 | 236 |
MS.gene89609.t1 | AT2G41480 | 43.046 | 302 | 161 | 5 | 34 | 330 | 33 | 328 | 1.11e-75 | 236 |
MS.gene89609.t1 | AT2G39040 | 43.831 | 308 | 163 | 7 | 30 | 330 | 46 | 350 | 1.19e-74 | 234 |
MS.gene89609.t1 | AT1G05240 | 41.584 | 303 | 164 | 6 | 34 | 330 | 30 | 325 | 1.80e-73 | 230 |
MS.gene89609.t1 | AT1G05250 | 41.584 | 303 | 164 | 6 | 34 | 330 | 30 | 325 | 1.80e-73 | 230 |
MS.gene89609.t1 | AT5G39580 | 41.667 | 300 | 163 | 7 | 34 | 330 | 29 | 319 | 3.97e-73 | 229 |
MS.gene89609.t1 | AT4G26010 | 39.936 | 313 | 173 | 6 | 19 | 330 | 11 | 309 | 5.85e-72 | 226 |
MS.gene89609.t1 | AT4G26010 | 39.936 | 313 | 173 | 6 | 19 | 330 | 39 | 337 | 1.60e-71 | 225 |
MS.gene89609.t1 | AT5G64100 | 41.806 | 299 | 164 | 5 | 34 | 330 | 41 | 331 | 1.68e-70 | 223 |
MS.gene89609.t1 | AT4G33420 | 40.426 | 329 | 178 | 8 | 2 | 330 | 15 | 325 | 8.12e-69 | 218 |
MS.gene89609.t1 | AT4G33870 | 37.015 | 335 | 172 | 5 | 28 | 326 | 66 | 397 | 1.78e-68 | 219 |
MS.gene89609.t1 | AT4G33420 | 40.426 | 329 | 178 | 8 | 2 | 330 | 62 | 372 | 4.31e-68 | 218 |
MS.gene89609.t1 | AT4G37520 | 37.908 | 306 | 186 | 3 | 28 | 330 | 25 | 329 | 1.27e-67 | 215 |
MS.gene89609.t1 | AT2G37130 | 39.867 | 301 | 170 | 5 | 34 | 330 | 3 | 296 | 1.70e-67 | 214 |
MS.gene89609.t1 | AT5G47000 | 37.730 | 326 | 193 | 5 | 7 | 330 | 13 | 330 | 1.94e-67 | 215 |
MS.gene89609.t1 | AT1G30870 | 41.196 | 301 | 165 | 6 | 34 | 331 | 55 | 346 | 3.49e-67 | 214 |
MS.gene89609.t1 | AT2G37130 | 39.867 | 301 | 170 | 5 | 34 | 330 | 34 | 327 | 5.52e-67 | 213 |
MS.gene89609.t1 | AT1G34510 | 38.608 | 316 | 179 | 6 | 16 | 330 | 8 | 309 | 6.86e-67 | 213 |
MS.gene89609.t1 | AT5G40150 | 39.672 | 305 | 176 | 4 | 28 | 330 | 30 | 328 | 7.20e-67 | 213 |
MS.gene89609.t1 | AT5G64110 | 40.803 | 299 | 169 | 4 | 34 | 330 | 38 | 330 | 7.88e-67 | 213 |
MS.gene89609.t1 | AT1G24110 | 37.994 | 329 | 195 | 6 | 6 | 332 | 3 | 324 | 1.63e-66 | 212 |
MS.gene89609.t1 | AT4G25980 | 38.742 | 302 | 175 | 5 | 34 | 330 | 30 | 326 | 1.83e-66 | 212 |
MS.gene89609.t1 | AT4G37530 | 38.487 | 304 | 183 | 3 | 30 | 330 | 27 | 329 | 1.93e-66 | 212 |
MS.gene89609.t1 | AT3G28200 | 39.016 | 305 | 177 | 4 | 28 | 330 | 19 | 316 | 2.48e-66 | 211 |
MS.gene89609.t1 | AT4G37520 | 37.582 | 306 | 184 | 4 | 28 | 330 | 25 | 326 | 5.49e-66 | 211 |
MS.gene89609.t1 | AT4G17690 | 39.274 | 303 | 176 | 4 | 30 | 330 | 26 | 322 | 1.04e-65 | 210 |
MS.gene89609.t1 | AT2G34060 | 39.474 | 304 | 178 | 5 | 30 | 328 | 42 | 344 | 2.15e-65 | 210 |
MS.gene89609.t1 | AT2G18980 | 37.237 | 333 | 196 | 5 | 1 | 330 | 1 | 323 | 3.62e-65 | 209 |
MS.gene89609.t1 | AT1G77100 | 40.000 | 335 | 175 | 11 | 5 | 330 | 2 | 319 | 5.07e-65 | 208 |
MS.gene89609.t1 | AT5G14130 | 35.604 | 323 | 203 | 5 | 9 | 330 | 12 | 330 | 5.60e-65 | 208 |
MS.gene89609.t1 | AT4G31760 | 38.080 | 323 | 190 | 4 | 10 | 330 | 12 | 326 | 1.11e-64 | 207 |
MS.gene89609.t1 | AT5G14130 | 35.604 | 323 | 203 | 5 | 9 | 330 | 53 | 371 | 1.45e-64 | 209 |
MS.gene89609.t1 | AT5G67400 | 38.235 | 306 | 185 | 3 | 28 | 330 | 25 | 329 | 9.29e-63 | 202 |
MS.gene89609.t1 | AT3G49960 | 37.667 | 300 | 183 | 3 | 34 | 330 | 31 | 329 | 1.83e-62 | 202 |
MS.gene89609.t1 | AT5G22410 | 37.117 | 326 | 186 | 9 | 7 | 327 | 11 | 322 | 1.96e-62 | 202 |
MS.gene89609.t1 | AT2G24800 | 38.333 | 300 | 177 | 5 | 34 | 330 | 35 | 329 | 2.15e-62 | 202 |
MS.gene89609.t1 | AT2G43480 | 37.338 | 308 | 180 | 7 | 28 | 330 | 36 | 335 | 8.50e-61 | 197 |
MS.gene89609.t1 | AT4G30170 | 35.922 | 309 | 188 | 5 | 26 | 330 | 23 | 325 | 4.85e-60 | 196 |
MS.gene89609.t1 | AT4G21960 | 37.000 | 300 | 179 | 4 | 34 | 330 | 35 | 327 | 4.05e-59 | 193 |
MS.gene89609.t1 | AT5G24070 | 37.248 | 298 | 175 | 6 | 38 | 330 | 45 | 335 | 9.48e-59 | 192 |
MS.gene89609.t1 | AT4G37530 | 37.945 | 253 | 154 | 2 | 30 | 279 | 27 | 279 | 5.58e-54 | 178 |
MS.gene89609.t1 | AT3G17070 | 33.993 | 303 | 189 | 6 | 34 | 330 | 42 | 339 | 6.45e-50 | 169 |
MS.gene89609.t1 | AT4G25980 | 46.341 | 164 | 84 | 3 | 34 | 197 | 75 | 234 | 3.76e-44 | 153 |
MS.gene89609.t1 | AT5G39580 | 45.614 | 171 | 88 | 3 | 34 | 204 | 29 | 194 | 1.51e-43 | 150 |
MS.gene89609.t1 | AT2G24800 | 40.933 | 193 | 108 | 2 | 34 | 224 | 35 | 223 | 2.42e-37 | 134 |
MS.gene89609.t1 | AT3G17070 | 31.900 | 279 | 178 | 7 | 58 | 330 | 4 | 276 | 2.95e-36 | 132 |
MS.gene89609.t1 | AT4G32320 | 27.852 | 298 | 132 | 10 | 40 | 322 | 99 | 328 | 2.08e-15 | 76.3 |
MS.gene89609.t1 | AT3G42570 | 39.560 | 91 | 54 | 1 | 106 | 195 | 57 | 147 | 2.23e-13 | 67.4 |
MS.gene89609.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 179 | 359 | 1.50e-11 | 65.1 |
MS.gene89609.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.73e-11 | 65.1 |
MS.gene89609.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.73e-11 | 65.1 |
MS.gene89609.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.73e-11 | 65.1 |
Find 65 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGATCTTGTTGCTCTTTC+TGG | 0.030538 | 8.3:+27304155 | MS.gene89609:CDS |
TTGCCTCTGTCACAAGAAAA+TGG | 0.164002 | 8.3:+27303059 | MS.gene89609:CDS |
TTCTGGTCACCACCAGATTT+TGG | 0.199866 | 8.3:-27304951 | None:intergenic |
AGTTTCTTGTGCTGACATTT+TGG | 0.236717 | 8.3:+27303769 | MS.gene89609:CDS |
CTTGAAGTTTGAATTTAGTT+AGG | 0.312864 | 8.3:-27304121 | None:intergenic |
TTCTTGTGACAGAGGCAAAA+AGG | 0.331440 | 8.3:-27303054 | None:intergenic |
TTGTCTGGAATGTGTTGTTT+GGG | 0.331686 | 8.3:-27304097 | None:intergenic |
CTTGCTTGCCATCTCCAGTT+TGG | 0.332320 | 8.3:-27304881 | None:intergenic |
CAATTACTTCAAGAACCTAT+TGG | 0.348212 | 8.3:+27305016 | MS.gene89609:CDS |
AGTCATAAAATTGTGGATAA+AGG | 0.354811 | 8.3:-27303089 | None:intergenic |
TGAATTTAGTTAGGATTGTC+TGG | 0.370931 | 8.3:-27304112 | None:intergenic |
ATTGTCTGGAATGTGTTGTT+TGG | 0.372079 | 8.3:-27304098 | None:intergenic |
CGCACTCAATGTCCAAAATC+TGG | 0.374881 | 8.3:+27304939 | MS.gene89609:CDS |
TGCCTCTGTCACAAGAAAAT+GGG | 0.376488 | 8.3:+27303060 | MS.gene89609:CDS |
AGTCAAGGTGCACCAGCTTT+AGG | 0.378431 | 8.3:+27304844 | MS.gene89609:CDS |
CCTAGAGGAACTTCCCAGTT+TGG | 0.380956 | 8.3:-27304020 | None:intergenic |
AGTCTAGGAAGAACAGATTC+TGG | 0.397707 | 8.3:-27304968 | None:intergenic |
CTAACTAAATTCAAACTTCA+AGG | 0.398099 | 8.3:+27304122 | MS.gene89609:CDS |
CAAGAACCTATTGGCTTACA+AGG | 0.407095 | 8.3:+27305025 | MS.gene89609:CDS |
TGGAATGTGTTGTTTGGGGC+TGG | 0.416065 | 8.3:-27304092 | None:intergenic |
CAAAGACTCTACAACCAAAC+TGG | 0.423306 | 8.3:+27304867 | MS.gene89609:CDS |
TGTAGGCTGGTGGACCAAAC+TGG | 0.428965 | 8.3:+27304006 | MS.gene89609:intron |
TGCAACAGCATTGGCAAGGA+TGG | 0.438806 | 8.3:-27303145 | None:intergenic |
CCTCTAGCTGAATTACGGTT+AGG | 0.445893 | 8.3:-27303692 | None:intergenic |
GAAACATTAGAACAAATTGC+AGG | 0.446729 | 8.3:+27305201 | MS.gene89609:CDS |
CAAATCCTCTAGCTGAATTA+CGG | 0.449179 | 8.3:-27303697 | None:intergenic |
ATAGTCCCTTGTAAGCCAAT+AGG | 0.450211 | 8.3:-27305031 | None:intergenic |
TATCTCCTTTGACAGGTTCA+AGG | 0.463087 | 8.3:+27305177 | MS.gene89609:CDS |
GTAGAGTCTTTGCCTAAAGC+TGG | 0.469738 | 8.3:-27304856 | None:intergenic |
GAATCAAGAATCAGCTGAGT+TGG | 0.474999 | 8.3:+27305082 | MS.gene89609:CDS |
TTAACAATATTCTGAGCTTG+TGG | 0.479154 | 8.3:-27303120 | None:intergenic |
TAATTCAGCTAGAGGATTTG+AGG | 0.484271 | 8.3:+27303700 | MS.gene89609:CDS |
GGAAATATATCTCCTTTGAC+AGG | 0.492948 | 8.3:+27305170 | MS.gene89609:CDS |
TGCTAAGTCTATGATCAAGA+TGG | 0.505230 | 8.3:+27305148 | MS.gene89609:CDS |
ATCTCCTTTGACAGGTTCAA+GGG | 0.516893 | 8.3:+27305178 | MS.gene89609:CDS |
ATTGCAGGGTGATTAATACT+TGG | 0.516904 | 8.3:+27305216 | MS.gene89609:CDS |
CTCTACAACCAAACTGGAGA+TGG | 0.517506 | 8.3:+27304873 | MS.gene89609:CDS |
TTGTCGGTGTGACATAGTCT+AGG | 0.537486 | 8.3:-27304983 | None:intergenic |
GGAAGCATTATAAGTGAGAA+GGG | 0.542785 | 8.3:+27303662 | MS.gene89609:CDS |
AGGTTCCTTTGCAACAGCAT+TGG | 0.547240 | 8.3:-27303154 | None:intergenic |
CCTTTGCAACAGCATTGGCA+AGG | 0.554524 | 8.3:-27303149 | None:intergenic |
GCTAAGTCTATGATCAAGAT+GGG | 0.554946 | 8.3:+27305149 | MS.gene89609:CDS |
TTGGTAGGGAGTCACACTAT+AGG | 0.555841 | 8.3:+27304819 | MS.gene89609:intron |
TCACTAGGTGCAAGCTTGAG+TGG | 0.557400 | 8.3:+27304053 | MS.gene89609:CDS |
CATGAATAGTCATAAAATTG+TGG | 0.558046 | 8.3:-27303096 | None:intergenic |
TGGAAGCATTATAAGTGAGA+AGG | 0.559426 | 8.3:+27303661 | MS.gene89609:CDS |
TTTCCCCTTGAACCTGTCAA+AGG | 0.564091 | 8.3:-27305182 | None:intergenic |
CCTTGCCAATGCTGTTGCAA+AGG | 0.568554 | 8.3:+27303149 | MS.gene89609:CDS |
CCTAACCGTAATTCAGCTAG+AGG | 0.578401 | 8.3:+27303692 | MS.gene89609:CDS |
GCCTCTGTCACAAGAAAATG+GGG | 0.581460 | 8.3:+27303061 | MS.gene89609:CDS |
TCAGCACAAGAAACTGTATG+AGG | 0.582884 | 8.3:-27303761 | None:intergenic |
CCAAACTGGGAAGTTCCTCT+AGG | 0.593069 | 8.3:+27304020 | MS.gene89609:CDS |
ATACCTTGACAAAACAGTCA+TGG | 0.595491 | 8.3:-27303209 | None:intergenic |
TCAATATTGTTAGATAACAG+TGG | 0.609885 | 8.3:+27303641 | MS.gene89609:CDS |
TGTCTGGAATGTGTTGTTTG+GGG | 0.613894 | 8.3:-27304096 | None:intergenic |
CTAGGCAGAAGAGACTCACT+AGG | 0.615944 | 8.3:+27304038 | MS.gene89609:CDS |
AAACATTAGAACAAATTGCA+GGG | 0.636631 | 8.3:+27305202 | MS.gene89609:CDS |
TCTCCTTTGACAGGTTCAAG+GGG | 0.642331 | 8.3:+27305179 | MS.gene89609:CDS |
AAGAACCTATTGGCTTACAA+GGG | 0.648661 | 8.3:+27305026 | MS.gene89609:CDS |
AGTGAGTCTCTTCTGCCTAG+AGG | 0.651535 | 8.3:-27304035 | None:intergenic |
ACTCAATGTCCAAAATCTGG+TGG | 0.654856 | 8.3:+27304942 | MS.gene89609:CDS |
GTAGGCTGGTGGACCAAACT+GGG | 0.661267 | 8.3:+27304007 | MS.gene89609:intron |
GTCACACTATAGGAAAGTCA+AGG | 0.668868 | 8.3:+27304829 | MS.gene89609:CDS |
GAAGCATTATAAGTGAGAAG+GGG | 0.700672 | 8.3:+27303663 | MS.gene89609:CDS |
AAAAGTGAAGCAGCTATACG+AGG | 0.700714 | 8.3:-27303174 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACATATATATTATATACAC+CGG | - | chr8.3:27303509-27303528 | None:intergenic | 15.0% |
!! | CATATATAAATTTGAATTTG+AGG | - | chr8.3:27304321-27304340 | None:intergenic | 15.0% |
!! | ATGAATCACAATAAAGAAAA+AGG | - | chr8.3:27303552-27303571 | None:intergenic | 20.0% |
!! | TAAAACAAATCTTATGCAAT+TGG | + | chr8.3:27304800-27304819 | MS.gene89609:intron | 20.0% |
!! | TGTCATAATTATGTGATATT+AGG | + | chr8.3:27303244-27303263 | MS.gene89609:intron | 20.0% |
!! | TTGAATGTAAACATATATGT+TGG | - | chr8.3:27303463-27303482 | None:intergenic | 20.0% |
!!! | AAGCAAAAAAACTACATTTT+AGG | + | chr8.3:27304520-27304539 | MS.gene89609:intron | 20.0% |
! | AAACATTAGAACAAATTGCA+GGG | + | chr8.3:27305202-27305221 | MS.gene89609:CDS | 25.0% |
! | AAGTCTTCAGCTATATTAAA+TGG | - | chr8.3:27303957-27303976 | None:intergenic | 25.0% |
! | AGTCATAAAATTGTGGATAA+AGG | - | chr8.3:27303092-27303111 | None:intergenic | 25.0% |
! | CATGAATAGTCATAAAATTG+TGG | - | chr8.3:27303099-27303118 | None:intergenic | 25.0% |
! | CATTCATTTAATGATGTATG+TGG | + | chr8.3:27304545-27304564 | MS.gene89609:intron | 25.0% |
! | CTAACTAAATTCAAACTTCA+AGG | + | chr8.3:27304122-27304141 | MS.gene89609:CDS | 25.0% |
! | CTTGAAGTTTGAATTTAGTT+AGG | - | chr8.3:27304124-27304143 | None:intergenic | 25.0% |
! | TCAATATTGTTAGATAACAG+TGG | + | chr8.3:27303641-27303660 | MS.gene89609:CDS | 25.0% |
!! | AAATTTATGTGACAAGTTGA+AGG | - | chr8.3:27304187-27304206 | None:intergenic | 25.0% |
!! | TAATTGTTGTCGAATTTTGT+CGG | - | chr8.3:27305002-27305021 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8.3:27304619-27304638 | MS.gene89609:intron | 25.0% |
!! | TTTTTGCTTATATTAGTGAC+CGG | - | chr8.3:27304509-27304528 | None:intergenic | 25.0% |
!!! | ACTACTTTTAGAAGTATTAC+CGG | + | chr8.3:27303487-27303506 | MS.gene89609:intron | 25.0% |
AATTATGTGATATTAGGTCG+TGG | + | chr8.3:27303250-27303269 | MS.gene89609:intron | 30.0% | |
ACAAATCTTATGCAATTGGT+AGG | + | chr8.3:27304804-27304823 | MS.gene89609:intron | 30.0% | |
ATATATATGTTAGTCGTGTC+CGG | + | chr8.3:27303518-27303537 | MS.gene89609:intron | 30.0% | |
ATCATAATTTATACACCCTC+CGG | + | chr8.3:27304487-27304506 | MS.gene89609:intron | 30.0% | |
ATGATAACTTTGACTCACAT+TGG | - | chr8.3:27304472-27304491 | None:intergenic | 30.0% | |
CAAATCTTATGCAATTGGTA+GGG | + | chr8.3:27304805-27304824 | MS.gene89609:intron | 30.0% | |
CAATTACTTCAAGAACCTAT+TGG | + | chr8.3:27305016-27305035 | MS.gene89609:CDS | 30.0% | |
CATTCATTTAATGATGCACA+TGG | - | chr8.3:27304584-27304603 | None:intergenic | 30.0% | |
GAAACATTAGAACAAATTGC+AGG | + | chr8.3:27305201-27305220 | MS.gene89609:CDS | 30.0% | |
TCACAATAAAGAAAAAGGCA+CGG | - | chr8.3:27303547-27303566 | None:intergenic | 30.0% | |
TGAATTTAGTTAGGATTGTC+TGG | - | chr8.3:27304115-27304134 | None:intergenic | 30.0% | |
TTAACAATATTCTGAGCTTG+TGG | - | chr8.3:27303123-27303142 | None:intergenic | 30.0% | |
! | TACTAATCCCTTTTATGTGT+AGG | + | chr8.3:27303989-27304008 | MS.gene89609:intron | 30.0% |
AGAAAATCAAATACACCCTC+CGG | - | chr8.3:27304641-27304660 | None:intergenic | 35.0% | |
ATACCTTGACAAAACAGTCA+TGG | - | chr8.3:27303212-27303231 | None:intergenic | 35.0% | |
ATTGCAGGGTGATTAATACT+TGG | + | chr8.3:27305216-27305235 | MS.gene89609:CDS | 35.0% | |
CAAATCCTCTAGCTGAATTA+CGG | - | chr8.3:27303700-27303719 | None:intergenic | 35.0% | |
GCTAAGTCTATGATCAAGAT+GGG | + | chr8.3:27305149-27305168 | MS.gene89609:CDS | 35.0% | |
GGAAATATATCTCCTTTGAC+AGG | + | chr8.3:27305170-27305189 | MS.gene89609:CDS | 35.0% | |
TAATTCAGCTAGAGGATTTG+AGG | + | chr8.3:27303700-27303719 | MS.gene89609:CDS | 35.0% | |
TGCTAAGTCTATGATCAAGA+TGG | + | chr8.3:27305148-27305167 | MS.gene89609:CDS | 35.0% | |
TGTAACACTTTGCAACAGTA+AGG | - | chr8.3:27303288-27303307 | None:intergenic | 35.0% | |
! | AAGAAGTTGATCATGTTGCA+GGG | + | chr8.3:27303608-27303627 | MS.gene89609:intron | 35.0% |
! | ATTGTCTGGAATGTGTTGTT+TGG | - | chr8.3:27304101-27304120 | None:intergenic | 35.0% |
! | CATCGCAACATCAAAGTTTT+TGG | - | chr8.3:27303364-27303383 | None:intergenic | 35.0% |
! | GAAGCATTATAAGTGAGAAG+GGG | + | chr8.3:27303663-27303682 | MS.gene89609:CDS | 35.0% |
! | GAATTTGAGGCACATGTATT+AGG | - | chr8.3:27304308-27304327 | None:intergenic | 35.0% |
! | GTCTTCAATTTGAAGTGTCA+AGG | - | chr8.3:27303413-27303432 | None:intergenic | 35.0% |
! | TTTCCATGACTGTTTTGTCA+AGG | + | chr8.3:27303206-27303225 | MS.gene89609:CDS | 35.0% |
!! | AAGAACCTATTGGCTTACAA+GGG | + | chr8.3:27305026-27305045 | MS.gene89609:CDS | 35.0% |
!! | AGTTTCTTGTGCTGACATTT+TGG | + | chr8.3:27303769-27303788 | MS.gene89609:CDS | 35.0% |
!! | GGAAGCATTATAAGTGAGAA+GGG | + | chr8.3:27303662-27303681 | MS.gene89609:CDS | 35.0% |
!! | TGGAAGCATTATAAGTGAGA+AGG | + | chr8.3:27303661-27303680 | MS.gene89609:CDS | 35.0% |
!! | TTGTCTGGAATGTGTTGTTT+GGG | - | chr8.3:27304100-27304119 | None:intergenic | 35.0% |
AAAAGTGAAGCAGCTATACG+AGG | - | chr8.3:27303177-27303196 | None:intergenic | 40.0% | |
AATTGTTGCAGCCTCAATCT+TGG | + | chr8.3:27303317-27303336 | MS.gene89609:intron | 40.0% | |
ACTCAATGTCCAAAATCTGG+TGG | + | chr8.3:27304942-27304961 | MS.gene89609:CDS | 40.0% | |
AGCTACATCACATGTGCATT+AGG | - | chr8.3:27304397-27304416 | None:intergenic | 40.0% | |
AGTCTAGGAAGAACAGATTC+TGG | - | chr8.3:27304971-27304990 | None:intergenic | 40.0% | |
ATAGTCCCTTGTAAGCCAAT+AGG | - | chr8.3:27305034-27305053 | None:intergenic | 40.0% | |
ATCTCCTTTGACAGGTTCAA+GGG | + | chr8.3:27305178-27305197 | MS.gene89609:CDS | 40.0% | |
CAAAGACTCTACAACCAAAC+TGG | + | chr8.3:27304867-27304886 | MS.gene89609:CDS | 40.0% | |
GAATCAAGAATCAGCTGAGT+TGG | + | chr8.3:27305082-27305101 | MS.gene89609:CDS | 40.0% | |
GTCACACTATAGGAAAGTCA+AGG | + | chr8.3:27304829-27304848 | MS.gene89609:CDS | 40.0% | |
GTTGATCTTGTTGCTCTTTC+TGG | + | chr8.3:27304155-27304174 | MS.gene89609:CDS | 40.0% | |
TACATCACATGTGCATTAGG+TGG | - | chr8.3:27304394-27304413 | None:intergenic | 40.0% | |
TATCTCCTTTGACAGGTTCA+AGG | + | chr8.3:27305177-27305196 | MS.gene89609:CDS | 40.0% | |
TCAGCACAAGAAACTGTATG+AGG | - | chr8.3:27303764-27303783 | None:intergenic | 40.0% | |
TGCCTCTGTCACAAGAAAAT+GGG | + | chr8.3:27303060-27303079 | MS.gene89609:CDS | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr8.3:27304623-27304642 | MS.gene89609:intron | 40.0% | |
TGCTTATATTAGTGACCGGA+GGG | - | chr8.3:27304505-27304524 | None:intergenic | 40.0% | |
TTCTTGTGACAGAGGCAAAA+AGG | - | chr8.3:27303057-27303076 | None:intergenic | 40.0% | |
TTGCCTCTGTCACAAGAAAA+TGG | + | chr8.3:27303059-27303078 | MS.gene89609:CDS | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr8.3:27304622-27304641 | MS.gene89609:intron | 40.0% | |
TTGCTTATATTAGTGACCGG+AGG | - | chr8.3:27304506-27304525 | None:intergenic | 40.0% | |
! | AATCCCTTTTATGTGTAGGC+TGG | + | chr8.3:27303993-27304012 | MS.gene89609:intron | 40.0% |
! | ACTTGCATTTTGCTCAGACT+CGG | + | chr8.3:27304676-27304695 | MS.gene89609:intron | 40.0% |
! | CAAGAAGTTGATCATGTTGC+AGG | + | chr8.3:27303607-27303626 | MS.gene89609:intron | 40.0% |
!! | CAAGAACCTATTGGCTTACA+AGG | + | chr8.3:27305025-27305044 | MS.gene89609:CDS | 40.0% |
!! | GTATAGCTGCTTCACTTTTG+AGG | + | chr8.3:27303178-27303197 | MS.gene89609:CDS | 40.0% |
!! | TGTCTGGAATGTGTTGTTTG+GGG | - | chr8.3:27304099-27304118 | None:intergenic | 40.0% |
AAGACGTGTCCAACATGTGT+CGG | + | chr8.3:27303428-27303447 | MS.gene89609:intron | 45.0% | |
AGGTTCCTTTGCAACAGCAT+TGG | - | chr8.3:27303157-27303176 | None:intergenic | 45.0% | |
CATCAACTCGACCAAGATTG+AGG | - | chr8.3:27303331-27303350 | None:intergenic | 45.0% | |
CCACCAGCCTACACATAAAA+GGG | - | chr8.3:27303999-27304018 | None:intergenic | 45.0% | |
CCTAACCGTAATTCAGCTAG+AGG | + | chr8.3:27303692-27303711 | MS.gene89609:CDS | 45.0% | |
CCTCTAGCTGAATTACGGTT+AGG | - | chr8.3:27303695-27303714 | None:intergenic | 45.0% | |
CGCACTCAATGTCCAAAATC+TGG | + | chr8.3:27304939-27304958 | MS.gene89609:CDS | 45.0% | |
CTCTACAACCAAACTGGAGA+TGG | + | chr8.3:27304873-27304892 | MS.gene89609:CDS | 45.0% | |
GCCTCTGTCACAAGAAAATG+GGG | + | chr8.3:27303061-27303080 | MS.gene89609:CDS | 45.0% | |
GTAGAGTCTTTGCCTAAAGC+TGG | - | chr8.3:27304859-27304878 | None:intergenic | 45.0% | |
TATCTGACACCGACACATGT+TGG | - | chr8.3:27303440-27303459 | None:intergenic | 45.0% | |
TCCACCAGCCTACACATAAA+AGG | - | chr8.3:27304000-27304019 | None:intergenic | 45.0% | |
TCTCCTTTGACAGGTTCAAG+GGG | + | chr8.3:27305179-27305198 | MS.gene89609:CDS | 45.0% | |
TTGGTAGGGAGTCACACTAT+AGG | + | chr8.3:27304819-27304838 | MS.gene89609:intron | 45.0% | |
TTGGTGTATGTGTGAGTCTG+TGG | - | chr8.3:27304453-27304472 | None:intergenic | 45.0% | |
TTGTCGGTGTGACATAGTCT+AGG | - | chr8.3:27304986-27305005 | None:intergenic | 45.0% | |
TTTCCCCTTGAACCTGTCAA+AGG | - | chr8.3:27305185-27305204 | None:intergenic | 45.0% | |
! | AAAGAAAAAGGCACGGACAC+CGG | - | chr8.3:27303540-27303559 | None:intergenic | 45.0% |
! | ACCCCATTTTCTTGTGACAG+AGG | - | chr8.3:27303065-27303084 | None:intergenic | 45.0% |
! | TTCTGGTCACCACCAGATTT+TGG | - | chr8.3:27304954-27304973 | None:intergenic | 45.0% |
AGTCAAGGTGCACCAGCTTT+AGG | + | chr8.3:27304844-27304863 | MS.gene89609:CDS | 50.0% | |
AGTGAGTCTCTTCTGCCTAG+AGG | - | chr8.3:27304038-27304057 | None:intergenic | 50.0% | |
CCAAACTGGGAAGTTCCTCT+AGG | + | chr8.3:27304020-27304039 | MS.gene89609:CDS | 50.0% | |
CCTAGAGGAACTTCCCAGTT+TGG | - | chr8.3:27304023-27304042 | None:intergenic | 50.0% | |
CCTTGCCAATGCTGTTGCAA+AGG | + | chr8.3:27303149-27303168 | MS.gene89609:CDS | 50.0% | |
CTAGGCAGAAGAGACTCACT+AGG | + | chr8.3:27304038-27304057 | MS.gene89609:CDS | 50.0% | |
CTTGCTTGCCATCTCCAGTT+TGG | - | chr8.3:27304884-27304903 | None:intergenic | 50.0% | |
TCACTAGGTGCAAGCTTGAG+TGG | + | chr8.3:27304053-27304072 | MS.gene89609:CDS | 50.0% | |
! | CCCTTTTATGTGTAGGCTGG+TGG | + | chr8.3:27303996-27304015 | MS.gene89609:intron | 50.0% |
!! | CCTTTGCAACAGCATTGGCA+AGG | - | chr8.3:27303152-27303171 | None:intergenic | 50.0% |
!! | TGCAACAGCATTGGCAAGGA+TGG | - | chr8.3:27303148-27303167 | None:intergenic | 50.0% |
!! | TGGAATGTGTTGTTTGGGGC+TGG | - | chr8.3:27304095-27304114 | None:intergenic | 50.0% |
! | GTAGGCTGGTGGACCAAACT+GGG | + | chr8.3:27304007-27304026 | MS.gene89609:intron | 55.0% |
! | TGTAGGCTGGTGGACCAAAC+TGG | + | chr8.3:27304006-27304025 | MS.gene89609:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 27303003 | 27305241 | 27303003 | ID=MS.gene89609 |
chr8.3 | mRNA | 27303003 | 27305241 | 27303003 | ID=MS.gene89609.t1;Parent=MS.gene89609 |
chr8.3 | exon | 27303003 | 27303227 | 27303003 | ID=MS.gene89609.t1.exon1;Parent=MS.gene89609.t1 |
chr8.3 | CDS | 27303003 | 27303227 | 27303003 | ID=cds.MS.gene89609.t1;Parent=MS.gene89609.t1 |
chr8.3 | exon | 27303629 | 27303820 | 27303629 | ID=MS.gene89609.t1.exon2;Parent=MS.gene89609.t1 |
chr8.3 | CDS | 27303629 | 27303820 | 27303629 | ID=cds.MS.gene89609.t1;Parent=MS.gene89609.t1 |
chr8.3 | exon | 27304011 | 27304176 | 27304011 | ID=MS.gene89609.t1.exon3;Parent=MS.gene89609.t1 |
chr8.3 | CDS | 27304011 | 27304176 | 27304011 | ID=cds.MS.gene89609.t1;Parent=MS.gene89609.t1 |
chr8.3 | exon | 27304826 | 27305241 | 27304826 | ID=MS.gene89609.t1.exon4;Parent=MS.gene89609.t1 |
chr8.3 | CDS | 27304826 | 27305241 | 27304826 | ID=cds.MS.gene89609.t1;Parent=MS.gene89609.t1 |
Gene Sequence |
Protein sequence |