Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91620.t1 | XP_024626193.1 | 99.1 | 677 | 6 | 0 | 1 | 677 | 1 | 677 | 0.00E+00 | 1292.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91620.t1 | Q9FNR3 | 40.0 | 657 | 354 | 5 | 10 | 665 | 8 | 625 | 1.0e-130 | 468.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91620.t1 | A0A072TXQ3 | 99.1 | 677 | 6 | 0 | 1 | 677 | 1 | 677 | 0.0e+00 | 1292.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene28226 | MS.gene91620 | PPI |
MS.gene91620 | MS.gene79407 | PPI |
MS.gene83829 | MS.gene91620 | PPI |
MS.gene79406 | MS.gene91620 | PPI |
MS.gene93502 | MS.gene91620 | PPI |
MS.gene79408 | MS.gene91620 | PPI |
MS.gene83828 | MS.gene91620 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91620.t1 | MTR_7g013770 | 99.261 | 677 | 5 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1384 |
MS.gene91620.t1 | MTR_3g025900 | 41.291 | 666 | 343 | 7 | 13 | 677 | 1 | 619 | 5.76e-173 | 508 |
MS.gene91620.t1 | MTR_4g103540 | 43.029 | 581 | 296 | 13 | 116 | 677 | 126 | 690 | 3.72e-138 | 421 |
MS.gene91620.t1 | MTR_8g021330 | 38.816 | 608 | 318 | 14 | 98 | 666 | 13 | 605 | 2.53e-122 | 377 |
MS.gene91620.t1 | MTR_5g073450 | 32.931 | 662 | 401 | 13 | 16 | 667 | 6 | 634 | 7.51e-111 | 348 |
MS.gene91620.t1 | MTR_3g031130 | 32.388 | 670 | 380 | 12 | 16 | 667 | 6 | 620 | 8.92e-100 | 319 |
MS.gene91620.t1 | MTR_1g057560 | 32.143 | 532 | 313 | 7 | 150 | 666 | 127 | 625 | 1.11e-88 | 290 |
MS.gene91620.t1 | MTR_1g090620 | 31.725 | 539 | 313 | 8 | 154 | 666 | 132 | 641 | 1.13e-88 | 290 |
MS.gene91620.t1 | MTR_7g026630 | 30.948 | 601 | 384 | 15 | 83 | 666 | 64 | 650 | 3.72e-86 | 284 |
MS.gene91620.t1 | MTR_2g096230 | 32.369 | 553 | 333 | 10 | 117 | 666 | 67 | 581 | 1.25e-85 | 280 |
MS.gene91620.t1 | MTR_6g033310 | 30.726 | 537 | 323 | 8 | 150 | 667 | 220 | 726 | 4.21e-83 | 278 |
MS.gene91620.t1 | MTR_5g073460 | 35.669 | 471 | 284 | 8 | 206 | 669 | 237 | 695 | 5.74e-82 | 274 |
MS.gene91620.t1 | MTR_4g062330 | 29.908 | 545 | 362 | 9 | 118 | 660 | 72 | 598 | 6.70e-75 | 253 |
MS.gene91620.t1 | MTR_1g067480 | 32.054 | 521 | 327 | 10 | 151 | 664 | 100 | 600 | 1.30e-74 | 252 |
MS.gene91620.t1 | MTR_1g117090 | 30.212 | 566 | 346 | 13 | 150 | 677 | 123 | 677 | 1.09e-73 | 251 |
MS.gene91620.t1 | MTR_1g067460 | 31.549 | 523 | 328 | 11 | 151 | 664 | 98 | 599 | 3.80e-67 | 232 |
MS.gene91620.t1 | MTR_5g073620 | 30.645 | 372 | 212 | 5 | 217 | 572 | 268 | 609 | 2.44e-48 | 184 |
MS.gene91620.t1 | MTR_5g073620 | 33.714 | 175 | 112 | 2 | 498 | 669 | 898 | 1071 | 3.45e-20 | 96.3 |
MS.gene91620.t1 | MTR_5g074130 | 27.313 | 454 | 298 | 9 | 225 | 670 | 250 | 679 | 1.62e-41 | 162 |
MS.gene91620.t1 | MTR_5g073480 | 26.398 | 447 | 241 | 11 | 215 | 655 | 256 | 620 | 5.57e-37 | 147 |
MS.gene91620.t1 | MTR_4g008260 | 26.103 | 544 | 312 | 15 | 157 | 676 | 174 | 651 | 3.92e-35 | 142 |
MS.gene91620.t1 | MTR_5g073920 | 26.027 | 438 | 280 | 9 | 240 | 668 | 259 | 661 | 1.26e-34 | 140 |
MS.gene91620.t1 | MTR_3g464010 | 26.681 | 476 | 303 | 14 | 209 | 669 | 227 | 671 | 5.63e-32 | 132 |
MS.gene91620.t1 | MTR_1g009620 | 24.112 | 535 | 336 | 12 | 156 | 672 | 183 | 665 | 2.54e-29 | 124 |
MS.gene91620.t1 | MTR_1g017910 | 25.721 | 416 | 283 | 9 | 237 | 637 | 251 | 655 | 3.11e-29 | 124 |
MS.gene91620.t1 | MTR_5g073900 | 25.945 | 397 | 231 | 11 | 247 | 638 | 4 | 342 | 9.14e-28 | 115 |
MS.gene91620.t1 | MTR_5g073770 | 32.000 | 225 | 140 | 3 | 189 | 400 | 152 | 376 | 1.04e-25 | 110 |
MS.gene91620.t1 | MTR_5g093530 | 25.876 | 371 | 223 | 8 | 300 | 664 | 246 | 570 | 7.14e-25 | 109 |
MS.gene91620.t1 | MTR_5g073780 | 33.143 | 175 | 113 | 2 | 498 | 669 | 53 | 226 | 5.66e-21 | 92.8 |
MS.gene91620.t1 | MTR_5g073490 | 32.335 | 167 | 92 | 3 | 504 | 665 | 3 | 153 | 1.33e-18 | 83.6 |
MS.gene91620.t1 | MTR_0229s0040 | 28.141 | 199 | 127 | 4 | 488 | 672 | 24 | 220 | 1.36e-16 | 80.1 |
MS.gene91620.t1 | MTR_5g073960 | 25.248 | 202 | 133 | 5 | 206 | 403 | 229 | 416 | 3.72e-13 | 72.4 |
MS.gene91620.t1 | MTR_5g073820 | 25.000 | 268 | 133 | 7 | 196 | 428 | 152 | 386 | 5.42e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91620.t1 | AT3G29400 | 48.748 | 679 | 310 | 9 | 12 | 677 | 5 | 658 | 0.0 | 585 |
MS.gene91620.t1 | AT5G61010 | 40.183 | 657 | 353 | 6 | 10 | 665 | 8 | 625 | 5.58e-164 | 485 |
MS.gene91620.t1 | AT5G61010 | 40.183 | 657 | 353 | 6 | 10 | 665 | 8 | 625 | 5.58e-164 | 485 |
MS.gene91620.t1 | AT5G50380 | 42.211 | 597 | 290 | 12 | 109 | 677 | 113 | 682 | 5.92e-149 | 448 |
MS.gene91620.t1 | AT3G14090 | 38.333 | 540 | 295 | 10 | 153 | 666 | 86 | 613 | 1.19e-118 | 368 |
MS.gene91620.t1 | AT1G72470 | 36.438 | 612 | 323 | 15 | 101 | 666 | 30 | 621 | 1.54e-114 | 358 |
MS.gene91620.t1 | AT1G54090 | 36.007 | 611 | 327 | 15 | 101 | 666 | 20 | 611 | 6.13e-111 | 348 |
MS.gene91620.t1 | AT5G58430 | 31.429 | 665 | 392 | 12 | 16 | 667 | 6 | 619 | 4.08e-103 | 328 |
MS.gene91620.t1 | AT5G03540 | 30.396 | 681 | 391 | 15 | 24 | 676 | 13 | 638 | 1.20e-90 | 295 |
MS.gene91620.t1 | AT5G03540 | 32.784 | 546 | 312 | 8 | 151 | 676 | 13 | 523 | 1.41e-90 | 291 |
MS.gene91620.t1 | AT1G07000 | 30.344 | 669 | 372 | 16 | 16 | 667 | 6 | 597 | 1.98e-89 | 291 |
MS.gene91620.t1 | AT5G03540 | 30.029 | 686 | 395 | 14 | 24 | 666 | 13 | 656 | 3.90e-89 | 292 |
MS.gene91620.t1 | AT5G52340 | 30.783 | 562 | 348 | 8 | 115 | 666 | 93 | 623 | 5.52e-86 | 283 |
MS.gene91620.t1 | AT5G59730 | 32.616 | 558 | 352 | 10 | 118 | 668 | 60 | 600 | 3.44e-83 | 275 |
MS.gene91620.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 118 | 668 | 60 | 600 | 4.67e-83 | 275 |
MS.gene91620.t1 | AT2G28640 | 30.577 | 520 | 328 | 6 | 151 | 669 | 94 | 581 | 1.10e-81 | 271 |
MS.gene91620.t1 | AT5G13150 | 31.690 | 568 | 356 | 14 | 114 | 667 | 96 | 645 | 1.47e-81 | 271 |
MS.gene91620.t1 | AT1G07725 | 32.563 | 519 | 324 | 9 | 151 | 666 | 96 | 591 | 5.28e-81 | 269 |
MS.gene91620.t1 | AT5G13990 | 30.635 | 630 | 353 | 17 | 76 | 667 | 99 | 682 | 1.07e-79 | 268 |
MS.gene91620.t1 | AT2G39380 | 29.211 | 558 | 365 | 7 | 118 | 667 | 76 | 611 | 5.65e-77 | 259 |
MS.gene91620.t1 | AT3G09520 | 29.167 | 600 | 366 | 13 | 88 | 664 | 41 | 604 | 4.09e-71 | 243 |
MS.gene91620.t1 | AT5G52350 | 30.684 | 453 | 284 | 4 | 221 | 666 | 148 | 577 | 3.28e-69 | 237 |
MS.gene91620.t1 | AT3G09530 | 28.996 | 538 | 349 | 8 | 141 | 666 | 86 | 602 | 5.13e-65 | 226 |
MS.gene91620.t1 | AT3G55150 | 28.342 | 561 | 368 | 9 | 117 | 667 | 75 | 611 | 2.74e-64 | 224 |
MS.gene91620.t1 | AT2G28650 | 29.320 | 515 | 307 | 9 | 151 | 664 | 96 | 554 | 4.60e-59 | 209 |
MS.gene91620.t1 | AT4G31540 | 25.056 | 443 | 303 | 7 | 232 | 664 | 231 | 654 | 1.56e-33 | 137 |
MS.gene91620.t1 | AT1G51640 | 24.169 | 451 | 297 | 9 | 237 | 665 | 199 | 626 | 6.67e-23 | 104 |
Find 145 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCAAAAGGTTGCCTATTC+TGG | 0.158452 | 7.4:-85376794 | None:intergenic |
AGACATATTGTGATGGCTTT+AGG | 0.215581 | 7.4:+85376342 | MS.gene91620:CDS |
TCAATCGATGATTTGGGATT+TGG | 0.227503 | 7.4:+85376593 | MS.gene91620:CDS |
CAAAGATCAAAAGATGGATT+TGG | 0.241414 | 7.4:+85377147 | MS.gene91620:CDS |
GCTCGCCTTCTCCGAAAATT+TGG | 0.241659 | 7.4:-85377223 | None:intergenic |
GAGAAGGAAGAGGGGAAGAT+AGG | 0.248350 | 7.4:+85376447 | MS.gene91620:CDS |
CTTCTCACTTTGTATGTTCA+TGG | 0.251343 | 7.4:-85376430 | None:intergenic |
GGGCTTTGAAAATCTTTGTT+AGG | 0.261655 | 7.4:+85377168 | MS.gene91620:CDS |
ACAAAACAAGCTTGACTTAC+AGG | 0.277082 | 7.4:-85377245 | None:intergenic |
AGGAAGATCAATCGATGATT+TGG | 0.283223 | 7.4:+85376586 | MS.gene91620:CDS |
GACATATTGTGATGGCTTTA+GGG | 0.283742 | 7.4:+85376343 | MS.gene91620:CDS |
TATTGAAGATGTCTTGAAAA+TGG | 0.283952 | 7.4:+85377106 | MS.gene91620:CDS |
TGATTTAGAAAATTATCTTT+TGG | 0.292941 | 7.4:+85378234 | MS.gene91620:CDS |
TACATGGCTGAAAAGGTTAA+AGG | 0.293386 | 7.4:+85377848 | MS.gene91620:CDS |
TTCCATTCTCAACTTTCTTA+AGG | 0.294818 | 7.4:+85377967 | MS.gene91620:CDS |
AGTTGTTGCAAAATCCTATT+AGG | 0.296540 | 7.4:+85378278 | MS.gene91620:CDS |
CAATCGATGATTTGGGATTT+GGG | 0.298646 | 7.4:+85376594 | MS.gene91620:CDS |
TTAAAGTGATTCAAGCTTAT+AGG | 0.315348 | 7.4:+85378152 | MS.gene91620:CDS |
ACAACGACTTGGTTTGATTC+AGG | 0.317391 | 7.4:+85376545 | MS.gene91620:CDS |
AAGCTTATACCATTGTTAGA+AGG | 0.328404 | 7.4:+85377036 | MS.gene91620:CDS |
TCGGCTTCGAGGATATTTAC+AGG | 0.329702 | 7.4:+85378065 | MS.gene91620:CDS |
TGCTATTATCATCTCCTAAT+AGG | 0.331305 | 7.4:-85378292 | None:intergenic |
AAAGATCAAAAGATGGATTT+GGG | 0.331630 | 7.4:+85377148 | MS.gene91620:CDS |
AGATTTGCGGATTTCTATAT+CGG | 0.356841 | 7.4:+85378129 | MS.gene91620:CDS |
TTCAGGAGAAAATAATGAAA+TGG | 0.362671 | 7.4:+85376562 | MS.gene91620:CDS |
TTTGGTGAAGCTATGTCTAT+TGG | 0.365289 | 7.4:+85377305 | MS.gene91620:CDS |
CTCAACTTTCTTAAGGATGA+AGG | 0.371916 | 7.4:+85377974 | MS.gene91620:CDS |
TGACATCAATGCTTTGTATT+CGG | 0.372086 | 7.4:+85377394 | MS.gene91620:CDS |
TTCAGCTTCGCGAAGATTTG+CGG | 0.372177 | 7.4:+85378116 | MS.gene91620:CDS |
AAGCTGCAAAATTGAAGCTT+TGG | 0.376068 | 7.4:-85377276 | None:intergenic |
AGAAGGAAGAGGGGAAGATA+GGG | 0.391816 | 7.4:+85376448 | MS.gene91620:CDS |
GGACGAGGTGGATGAGGAGG+AGG | 0.393488 | 7.4:+85376500 | MS.gene91620:CDS |
AAGAAGATTCTGGCTGATCT+TGG | 0.397682 | 7.4:+85376393 | MS.gene91620:CDS |
AATGAACAAACACTCATCTA+AGG | 0.398840 | 7.4:-85377063 | None:intergenic |
GGAAGATCAATCGATGATTT+GGG | 0.400737 | 7.4:+85376587 | MS.gene91620:CDS |
TTGGCTTCTGTTATCATCTT+CGG | 0.401388 | 7.4:-85377687 | None:intergenic |
CAATGGCTGTTGAGGAATCT+AGG | 0.406090 | 7.4:+85376271 | None:intergenic |
TCTTCGCGAAGCTGAACATC+TGG | 0.409566 | 7.4:-85378109 | None:intergenic |
GGCTTTGAAAATCTTTGTTA+GGG | 0.412401 | 7.4:+85377169 | MS.gene91620:CDS |
TCAGGAGAAAATAATGAAAT+GGG | 0.414181 | 7.4:+85376563 | MS.gene91620:CDS |
GTGTTTGTTCATTCTTGAAA+TGG | 0.417456 | 7.4:+85377073 | MS.gene91620:CDS |
TTCGGACGAGGTTGGTTCCT+CGG | 0.417915 | 7.4:+85377412 | MS.gene91620:CDS |
CGTGTCAGGTGACGATGAAA+TGG | 0.419107 | 7.4:-85377654 | None:intergenic |
GAAAATGGAATGGGGTACTT+TGG | 0.421152 | 7.4:+85377121 | MS.gene91620:CDS |
CCAAGACTGAAGCAAATGAT+AGG | 0.421729 | 7.4:-85377748 | None:intergenic |
CTGTTATCATCTTCGGTACC+TGG | 0.422866 | 7.4:-85377680 | None:intergenic |
CAAGCTTATAGGACATTTGT+TGG | 0.424622 | 7.4:+85378163 | MS.gene91620:CDS |
CCTACATTACATGGCTGAAA+AGG | 0.424669 | 7.4:+85377841 | MS.gene91620:CDS |
ATTCAGTGCTTCGCTGTAAT+CGG | 0.425187 | 7.4:-85377600 | None:intergenic |
GAGAATTCGTATCAATTTCT+CGG | 0.430289 | 7.4:-85377339 | None:intergenic |
AGCGAGGAAGATGCTGTTGA+TGG | 0.432559 | 7.4:+85376840 | MS.gene91620:CDS |
TTCGTATCAATTTCTCGGGT+TGG | 0.433899 | 7.4:-85377334 | None:intergenic |
CCTATCATTTGCTTCAGTCT+TGG | 0.436027 | 7.4:+85377748 | MS.gene91620:CDS |
TTCTCTTCTCTTTCTAACTC+AGG | 0.440235 | 7.4:-85376303 | None:intergenic |
AAATACTCAGAAGTTTCTTC+AGG | 0.441270 | 7.4:-85376618 | None:intergenic |
TGTCATTGATTTAGTTCATC+CGG | 0.441468 | 7.4:+85376944 | MS.gene91620:CDS |
ATCCTTAAGAAAGTTGAGAA+TGG | 0.446088 | 7.4:-85377969 | None:intergenic |
CGGCTGTGATTCCTGATCTC+AGG | 0.446347 | 7.4:+85376964 | MS.gene91620:CDS |
TCGGTACCTGGACTCGTGTC+AGG | 0.449566 | 7.4:-85377668 | None:intergenic |
TCTGAACTTAGGATCATATT+CGG | 0.456601 | 7.4:+85377872 | MS.gene91620:CDS |
GGAGGACGAGGTGGATGAGG+AGG | 0.462689 | 7.4:+85376497 | MS.gene91620:CDS |
GCAACCTGCTTATCCAGAAT+AGG | 0.463293 | 7.4:+85376781 | MS.gene91620:CDS |
AGAATTCGTATCAATTTCTC+GGG | 0.468076 | 7.4:-85377338 | None:intergenic |
ACATGGCTGAAAAGGTTAAA+GGG | 0.470527 | 7.4:+85377849 | MS.gene91620:CDS |
TGGTGGAGGGATACATCCTT+TGG | 0.471919 | 7.4:+85377544 | MS.gene91620:CDS |
GTGGATGAGGAGGAGGAAGA+AGG | 0.474652 | 7.4:+85376507 | MS.gene91620:CDS |
AATGGATCCGAAAACACAAC+TGG | 0.475821 | 7.4:+85377900 | MS.gene91620:CDS |
AAGCTTCTACCTCGGCTTCG+AGG | 0.476916 | 7.4:+85378054 | MS.gene91620:CDS |
GGGGAAGATAGGGAGAGAAA+AGG | 0.477815 | 7.4:+85376458 | MS.gene91620:CDS |
ACGCATATTGATCGAGAAGT+TGG | 0.479989 | 7.4:+85376659 | MS.gene91620:CDS |
CACGAGGTTCTGAACAGATT+GGG | 0.480214 | 7.4:+85377449 | MS.gene91620:CDS |
AAGTGATGAAAAGAAGATTC+TGG | 0.481173 | 7.4:+85376383 | MS.gene91620:CDS |
CCGTCAACAACGCCTTTAGT+TGG | 0.482370 | 7.4:+85377524 | MS.gene91620:CDS |
TCCTGGTAGATTTCCCTCAA+TGG | 0.483428 | 7.4:+85377715 | MS.gene91620:CDS |
CAATGCTTTGTATTCGGACG+AGG | 0.488922 | 7.4:+85377400 | MS.gene91620:CDS |
TTTACAGGATTCAAACGGCT+TGG | 0.489894 | 7.4:+85378080 | MS.gene91620:CDS |
AGATGTCTTGAAAATGGAAT+GGG | 0.491461 | 7.4:+85377112 | MS.gene91620:CDS |
GATATGTTATGAATTATCTT+CGG | 0.492481 | 7.4:+85377570 | MS.gene91620:CDS |
GAGACATACTCAGGTTCAAA+AGG | 0.492494 | 7.4:-85376807 | None:intergenic |
AAGCATTGATGTCAGGCATA+AGG | 0.492688 | 7.4:-85377385 | None:intergenic |
AAAGGAGGATGATATCGATA+AGG | 0.494033 | 7.4:+85376476 | MS.gene91620:CDS |
TGTTCATTCTTGAAATGGAA+AGG | 0.497581 | 7.4:+85377078 | MS.gene91620:CDS |
CCAACTAAAGGCGTTGTTGA+CGG | 0.497916 | 7.4:-85377524 | None:intergenic |
GTTGCCTATTCTGGATAAGC+AGG | 0.498736 | 7.4:-85376785 | None:intergenic |
TTGATTATCAATGGCTGTTG+AGG | 0.499717 | 7.4:+85376263 | None:intergenic |
CTTATAGGACATTTGTTGGA+AGG | 0.502026 | 7.4:+85378167 | MS.gene91620:CDS |
CCACGAGGTTCTGAACAGAT+TGG | 0.503504 | 7.4:+85377448 | MS.gene91620:CDS |
TTTGCAATACACCTGAGATC+AGG | 0.506607 | 7.4:-85376975 | None:intergenic |
AGGAATTGCCGCGCCATTGA+GGG | 0.506822 | 7.4:-85377728 | None:intergenic |
TCGTCACCTGACACGAGTCC+AGG | 0.510495 | 7.4:+85377662 | MS.gene91620:CDS |
GAAGATAGGGAGAGAAAAGG+AGG | 0.511022 | 7.4:+85376461 | MS.gene91620:CDS |
ATCAATTTCTCGGGTTGGTG+AGG | 0.514697 | 7.4:-85377329 | None:intergenic |
AGGTTAAAGGGTCTGAACTT+AGG | 0.515044 | 7.4:+85377861 | MS.gene91620:CDS |
GGGTTTATCTTGCAAGTGAA+AGG | 0.515546 | 7.4:+85377189 | MS.gene91620:CDS |
TCAACAACGCCTTTAGTTGG+TGG | 0.518800 | 7.4:+85377527 | MS.gene91620:CDS |
AACAGAAGCCAAGCATCTCC+TGG | 0.521198 | 7.4:+85377698 | MS.gene91620:CDS |
AGCTTATACCATTGTTAGAA+GGG | 0.522929 | 7.4:+85377037 | MS.gene91620:CDS |
AATGAACAACCTACATTACA+TGG | 0.524061 | 7.4:+85377832 | MS.gene91620:CDS |
GAAATCTACCAGGAGATGCT+TGG | 0.524343 | 7.4:-85377706 | None:intergenic |
TAAGGAGGACGAGGTGGATG+AGG | 0.527624 | 7.4:+85376494 | MS.gene91620:CDS |
TGGTTTCAAAGATCAAAAGA+TGG | 0.529315 | 7.4:+85377141 | MS.gene91620:CDS |
AAGATGTCTTGAAAATGGAA+TGG | 0.530741 | 7.4:+85377111 | MS.gene91620:CDS |
GGATATTTACAGGATTCAAA+CGG | 0.532545 | 7.4:+85378075 | MS.gene91620:CDS |
GGCTTATAGTGTTCTTCAGA+CGG | 0.538239 | 7.4:+85376731 | MS.gene91620:CDS |
TCTGAAAGATCAAGAAGAAG+AGG | 0.540005 | 7.4:+85377628 | MS.gene91620:CDS |
GAATACAAAGCATTGATGTC+AGG | 0.541545 | 7.4:-85377392 | None:intergenic |
ACAACGCCTTTAGTTGGTGG+AGG | 0.547732 | 7.4:+85377530 | MS.gene91620:CDS |
GCGAGGAAGATGCTGTTGAT+GGG | 0.556421 | 7.4:+85376841 | MS.gene91620:CDS |
GCCATTGAGGGAAATCTACC+AGG | 0.565256 | 7.4:-85377716 | None:intergenic |
GGATCATATTCGGAGACGAA+TGG | 0.566493 | 7.4:+85377882 | MS.gene91620:CDS |
GAGGAGGAGGAAGAAGGTGT+CGG | 0.568539 | 7.4:+85376513 | MS.gene91620:CDS |
TTCTTCAGACGGCTATGACA+CGG | 0.570975 | 7.4:+85376742 | MS.gene91620:CDS |
TAGGAATTGCCGCGCCATTG+AGG | 0.571255 | 7.4:-85377729 | None:intergenic |
TGTATCCCTCCACCAACTAA+AGG | 0.571954 | 7.4:-85377536 | None:intergenic |
TTTGAGACAGAATTTGAACC+GGG | 0.573177 | 7.4:-85378007 | None:intergenic |
AAGTTACGAAGCTTCTACCT+CGG | 0.578858 | 7.4:+85378046 | MS.gene91620:CDS |
TGTAAATATCCTCGAAGCCG+AGG | 0.581914 | 7.4:-85378063 | None:intergenic |
GCTTTGTATTCGGACGAGGT+TGG | 0.582361 | 7.4:+85377404 | MS.gene91620:CDS |
TGAAATACGAGAGAGCTAGT+TGG | 0.586132 | 7.4:+85377942 | MS.gene91620:CDS |
ATACAAAGTGAGAAGGAAGA+GGG | 0.588635 | 7.4:+85376438 | MS.gene91620:CDS |
CATGAACATACAAAGTGAGA+AGG | 0.589110 | 7.4:+85376431 | MS.gene91620:CDS |
CATACAAAGTGAGAAGGAAG+AGG | 0.591149 | 7.4:+85376437 | MS.gene91620:CDS |
TTCATAACATATCTCGCCAA+AGG | 0.592284 | 7.4:-85377560 | None:intergenic |
GGTGTTATTGAACAACGACT+TGG | 0.595563 | 7.4:+85376534 | MS.gene91620:CDS |
CAACGCCTTTAGTTGGTGGA+GGG | 0.597098 | 7.4:+85377531 | MS.gene91620:CDS |
GGAGAAAATAATGAAATGGG+AGG | 0.598922 | 7.4:+85376566 | MS.gene91620:CDS |
GATCGAAACGAGACATACTC+AGG | 0.599078 | 7.4:-85376816 | None:intergenic |
CTGAGATCAGGAATCACAGC+CGG | 0.603127 | 7.4:-85376963 | None:intergenic |
GGAGGATGATATCGATAAGG+AGG | 0.604036 | 7.4:+85376479 | MS.gene91620:CDS |
TTTATCTTGCAAGTGAAAGG+TGG | 0.606242 | 7.4:+85377192 | MS.gene91620:CDS |
ATCAATGACATGCTCTTCAG+TGG | 0.607832 | 7.4:-85376931 | None:intergenic |
GATGAAGGAATTCACGCTCC+CGG | 0.612751 | 7.4:+85377989 | MS.gene91620:CDS |
TGATATCGATAAGGAGGACG+AGG | 0.617914 | 7.4:+85376485 | MS.gene91620:CDS |
TAAGGCATCCCTTCTAACAA+TGG | 0.621969 | 7.4:-85377045 | None:intergenic |
ATATTGATCGAGAAGTTGGA+AGG | 0.644156 | 7.4:+85376663 | MS.gene91620:CDS |
TATCGATAAGGAGGACGAGG+TGG | 0.645889 | 7.4:+85376488 | MS.gene91620:CDS |
TGTCTCGTTTCGATCGAGCG+AGG | 0.647882 | 7.4:+85376824 | MS.gene91620:CDS |
TACAAAGTGAGAAGGAAGAG+GGG | 0.649878 | 7.4:+85376439 | MS.gene91620:CDS |
GTAGATTTCCCTCAATGGCG+CGG | 0.659563 | 7.4:+85377720 | MS.gene91620:CDS |
TGCAGCAAGACATATTGTGA+TGG | 0.663518 | 7.4:+85376335 | MS.gene91620:CDS |
AGTCTTGGAGAACAATCTCG+AGG | 0.679517 | 7.4:+85377763 | MS.gene91620:CDS |
GGTTCACTTTGAATGCCACG+AGG | 0.713802 | 7.4:+85377433 | MS.gene91620:CDS |
CCAATCTGTTCAGAACCTCG+TGG | 0.714380 | 7.4:-85377448 | None:intergenic |
GATGTCTTGAAAATGGAATG+GGG | 0.730786 | 7.4:+85377113 | MS.gene91620:CDS |
GTGGCATTCAAAGTGAACCG+AGG | 0.739746 | 7.4:-85377429 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTTAGAAAATTATCTTT+TGG | + | chr7.4:85378234-85378253 | MS.gene91620:CDS | 15.0% |
!! | GATATGTTATGAATTATCTT+CGG | + | chr7.4:85377570-85377589 | MS.gene91620:CDS | 20.0% |
! | TATTGAAGATGTCTTGAAAA+TGG | + | chr7.4:85377106-85377125 | MS.gene91620:CDS | 25.0% |
! | TCAGGAGAAAATAATGAAAT+GGG | + | chr7.4:85376563-85376582 | MS.gene91620:CDS | 25.0% |
! | TTAAAGTGATTCAAGCTTAT+AGG | + | chr7.4:85378152-85378171 | MS.gene91620:CDS | 25.0% |
! | TTCAGGAGAAAATAATGAAA+TGG | + | chr7.4:85376562-85376581 | MS.gene91620:CDS | 25.0% |
!! | AAAGATCAAAAGATGGATTT+GGG | + | chr7.4:85377148-85377167 | MS.gene91620:CDS | 25.0% |
!! | AGAGTATAAGTTTTTGCAAA+GGG | + | chr7.4:85376710-85376729 | MS.gene91620:CDS | 25.0% |
!! | TATCTTTTGGATTTCTTTGA+AGG | + | chr7.4:85378247-85378266 | MS.gene91620:CDS | 25.0% |
!!! | AAGAGTATAAGTTTTTGCAA+AGG | + | chr7.4:85376709-85376728 | MS.gene91620:CDS | 25.0% |
AAATACTCAGAAGTTTCTTC+AGG | - | chr7.4:85376621-85376640 | None:intergenic | 30.0% | |
AAGATGTCTTGAAAATGGAA+TGG | + | chr7.4:85377111-85377130 | MS.gene91620:CDS | 30.0% | |
AAGCTTATACCATTGTTAGA+AGG | + | chr7.4:85377036-85377055 | MS.gene91620:CDS | 30.0% | |
AAGTGATGAAAAGAAGATTC+TGG | + | chr7.4:85376383-85376402 | MS.gene91620:CDS | 30.0% | |
AATGAACAAACACTCATCTA+AGG | - | chr7.4:85377066-85377085 | None:intergenic | 30.0% | |
AATGAACAACCTACATTACA+TGG | + | chr7.4:85377832-85377851 | MS.gene91620:CDS | 30.0% | |
AGAATTCGTATCAATTTCTC+GGG | - | chr7.4:85377341-85377360 | None:intergenic | 30.0% | |
AGATGTCTTGAAAATGGAAT+GGG | + | chr7.4:85377112-85377131 | MS.gene91620:CDS | 30.0% | |
AGATTTGCGGATTTCTATAT+CGG | + | chr7.4:85378129-85378148 | MS.gene91620:CDS | 30.0% | |
AGCTTATACCATTGTTAGAA+GGG | + | chr7.4:85377037-85377056 | MS.gene91620:CDS | 30.0% | |
AGTTGTTGCAAAATCCTATT+AGG | + | chr7.4:85378278-85378297 | MS.gene91620:CDS | 30.0% | |
ATCCTTAAGAAAGTTGAGAA+TGG | - | chr7.4:85377972-85377991 | None:intergenic | 30.0% | |
GAGAATTCGTATCAATTTCT+CGG | - | chr7.4:85377342-85377361 | None:intergenic | 30.0% | |
GGATATTTACAGGATTCAAA+CGG | + | chr7.4:85378075-85378094 | MS.gene91620:CDS | 30.0% | |
GTGTTTGTTCATTCTTGAAA+TGG | + | chr7.4:85377073-85377092 | MS.gene91620:CDS | 30.0% | |
TCTGAACTTAGGATCATATT+CGG | + | chr7.4:85377872-85377891 | MS.gene91620:CDS | 30.0% | |
TGACATCAATGCTTTGTATT+CGG | + | chr7.4:85377394-85377413 | MS.gene91620:CDS | 30.0% | |
TGGTTTCAAAGATCAAAAGA+TGG | + | chr7.4:85377141-85377160 | MS.gene91620:CDS | 30.0% | |
TGTTCATTCTTGAAATGGAA+AGG | + | chr7.4:85377078-85377097 | MS.gene91620:CDS | 30.0% | |
TTCCATTCTCAACTTTCTTA+AGG | + | chr7.4:85377967-85377986 | MS.gene91620:CDS | 30.0% | |
! | ATTTTGCAGCTTCTGAATTT+TGG | + | chr7.4:85377287-85377306 | MS.gene91620:CDS | 30.0% |
! | CAAAGATCAAAAGATGGATT+TGG | + | chr7.4:85377147-85377166 | MS.gene91620:CDS | 30.0% |
!! | GGCTTTGAAAATCTTTGTTA+GGG | + | chr7.4:85377169-85377188 | MS.gene91620:CDS | 30.0% |
!! | TGTCATTGATTTAGTTCATC+CGG | + | chr7.4:85376944-85376963 | MS.gene91620:CDS | 30.0% |
!!! | TTTTGAGACAGAATTTGAAC+CGG | - | chr7.4:85378011-85378030 | None:intergenic | 30.0% |
!!! | TTTTGGTGATGATTCATTTG+AGG | + | chr7.4:85376878-85376897 | MS.gene91620:CDS | 30.0% |
AAAGGAGGATGATATCGATA+AGG | + | chr7.4:85376476-85376495 | MS.gene91620:CDS | 35.0% | |
AAGCTGCAAAATTGAAGCTT+TGG | - | chr7.4:85377279-85377298 | None:intergenic | 35.0% | |
ACAAAACAAGCTTGACTTAC+AGG | - | chr7.4:85377248-85377267 | None:intergenic | 35.0% | |
ACATGGCTGAAAAGGTTAAA+GGG | + | chr7.4:85377849-85377868 | MS.gene91620:CDS | 35.0% | |
AGACATATTGTGATGGCTTT+AGG | + | chr7.4:85376342-85376361 | MS.gene91620:CDS | 35.0% | |
AGGAAGATCAATCGATGATT+TGG | + | chr7.4:85376586-85376605 | MS.gene91620:CDS | 35.0% | |
ATACAAAGTGAGAAGGAAGA+GGG | + | chr7.4:85376438-85376457 | MS.gene91620:CDS | 35.0% | |
ATATTGATCGAGAAGTTGGA+AGG | + | chr7.4:85376663-85376682 | MS.gene91620:CDS | 35.0% | |
CAAGCTTATAGGACATTTGT+TGG | + | chr7.4:85378163-85378182 | MS.gene91620:CDS | 35.0% | |
CATGAACATACAAAGTGAGA+AGG | + | chr7.4:85376431-85376450 | MS.gene91620:CDS | 35.0% | |
CTCAACTTTCTTAAGGATGA+AGG | + | chr7.4:85377974-85377993 | MS.gene91620:CDS | 35.0% | |
CTTCTCACTTTGTATGTTCA+TGG | - | chr7.4:85376433-85376452 | None:intergenic | 35.0% | |
GATGTCTTGAAAATGGAATG+GGG | + | chr7.4:85377113-85377132 | MS.gene91620:CDS | 35.0% | |
GGAAGATCAATCGATGATTT+GGG | + | chr7.4:85376587-85376606 | MS.gene91620:CDS | 35.0% | |
GGAGAAAATAATGAAATGGG+AGG | + | chr7.4:85376566-85376585 | MS.gene91620:CDS | 35.0% | |
TACATGGCTGAAAAGGTTAA+AGG | + | chr7.4:85377848-85377867 | MS.gene91620:CDS | 35.0% | |
TCTGAAAGATCAAGAAGAAG+AGG | + | chr7.4:85377628-85377647 | MS.gene91620:CDS | 35.0% | |
TTCATAACATATCTCGCCAA+AGG | - | chr7.4:85377563-85377582 | None:intergenic | 35.0% | |
TTCTCTTCTCTTTCTAACTC+AGG | - | chr7.4:85376306-85376325 | None:intergenic | 35.0% | |
TTGGCTTCTGTTATCATCTT+CGG | - | chr7.4:85377690-85377709 | None:intergenic | 35.0% | |
TTTATCTTGCAAGTGAAAGG+TGG | + | chr7.4:85377192-85377211 | MS.gene91620:CDS | 35.0% | |
TTTGGTGAAGCTATGTCTAT+TGG | + | chr7.4:85377305-85377324 | MS.gene91620:CDS | 35.0% | |
! | CAATCGATGATTTGGGATTT+GGG | + | chr7.4:85376594-85376613 | MS.gene91620:CDS | 35.0% |
! | CTTATAGGACATTTGTTGGA+AGG | + | chr7.4:85378167-85378186 | MS.gene91620:CDS | 35.0% |
! | GAAACTTCCAGTTGTGTTTT+CGG | - | chr7.4:85377910-85377929 | None:intergenic | 35.0% |
! | GACATATTGTGATGGCTTTA+GGG | + | chr7.4:85376343-85376362 | MS.gene91620:CDS | 35.0% |
! | GGGAATTCTTTTGTCTCTTT+TGG | + | chr7.4:85376861-85376880 | MS.gene91620:CDS | 35.0% |
! | TCAATCGATGATTTGGGATT+TGG | + | chr7.4:85376593-85376612 | MS.gene91620:CDS | 35.0% |
! | TGGCTTAGTGACCAAATTTT+CGG | + | chr7.4:85377212-85377231 | MS.gene91620:CDS | 35.0% |
! | TTTGAGACAGAATTTGAACC+GGG | - | chr7.4:85378010-85378029 | None:intergenic | 35.0% |
!! | GAATACAAAGCATTGATGTC+AGG | - | chr7.4:85377395-85377414 | None:intergenic | 35.0% |
!! | GGGCTTTGAAAATCTTTGTT+AGG | + | chr7.4:85377168-85377187 | MS.gene91620:CDS | 35.0% |
AAGTTACGAAGCTTCTACCT+CGG | + | chr7.4:85378046-85378065 | MS.gene91620:CDS | 40.0% | |
AATGGATCCGAAAACACAAC+TGG | + | chr7.4:85377900-85377919 | MS.gene91620:CDS | 40.0% | |
ACGCATATTGATCGAGAAGT+TGG | + | chr7.4:85376659-85376678 | MS.gene91620:CDS | 40.0% | |
AGGTTAAAGGGTCTGAACTT+AGG | + | chr7.4:85377861-85377880 | MS.gene91620:CDS | 40.0% | |
ATCAATGACATGCTCTTCAG+TGG | - | chr7.4:85376934-85376953 | None:intergenic | 40.0% | |
ATTCAGTGCTTCGCTGTAAT+CGG | - | chr7.4:85377603-85377622 | None:intergenic | 40.0% | |
CATACAAAGTGAGAAGGAAG+AGG | + | chr7.4:85376437-85376456 | MS.gene91620:CDS | 40.0% | |
CCAAGACTGAAGCAAATGAT+AGG | - | chr7.4:85377751-85377770 | None:intergenic | 40.0% | |
CCTACATTACATGGCTGAAA+AGG | + | chr7.4:85377841-85377860 | MS.gene91620:CDS | 40.0% | |
CCTATCATTTGCTTCAGTCT+TGG | + | chr7.4:85377748-85377767 | MS.gene91620:CDS | 40.0% | |
GAGACATACTCAGGTTCAAA+AGG | - | chr7.4:85376810-85376829 | None:intergenic | 40.0% | |
GGCTTATAGTGTTCTTCAGA+CGG | + | chr7.4:85376731-85376750 | MS.gene91620:CDS | 40.0% | |
GGGTTTATCTTGCAAGTGAA+AGG | + | chr7.4:85377189-85377208 | MS.gene91620:CDS | 40.0% | |
GTTCAAAAGGTTGCCTATTC+TGG | - | chr7.4:85376797-85376816 | None:intergenic | 40.0% | |
TACAAAGTGAGAAGGAAGAG+GGG | + | chr7.4:85376439-85376458 | MS.gene91620:CDS | 40.0% | |
TGAAATACGAGAGAGCTAGT+TGG | + | chr7.4:85377942-85377961 | MS.gene91620:CDS | 40.0% | |
TGCAGCAAGACATATTGTGA+TGG | + | chr7.4:85376335-85376354 | MS.gene91620:CDS | 40.0% | |
TTCGTATCAATTTCTCGGGT+TGG | - | chr7.4:85377337-85377356 | None:intergenic | 40.0% | |
TTTACAGGATTCAAACGGCT+TGG | + | chr7.4:85378080-85378099 | MS.gene91620:CDS | 40.0% | |
TTTGCAATACACCTGAGATC+AGG | - | chr7.4:85376978-85376997 | None:intergenic | 40.0% | |
! | AAGAAGATTCTGGCTGATCT+TGG | + | chr7.4:85376393-85376412 | MS.gene91620:CDS | 40.0% |
! | AGTGACCAAATTTTCGGAGA+AGG | + | chr7.4:85377218-85377237 | MS.gene91620:CDS | 40.0% |
! | CCTTTTCAGCCATGTAATGT+AGG | - | chr7.4:85377844-85377863 | None:intergenic | 40.0% |
! | GAAAATGGAATGGGGTACTT+TGG | + | chr7.4:85377121-85377140 | MS.gene91620:CDS | 40.0% |
! | TAAGGCATCCCTTCTAACAA+TGG | - | chr7.4:85377048-85377067 | None:intergenic | 40.0% |
!! | AAGCATTGATGTCAGGCATA+AGG | - | chr7.4:85377388-85377407 | None:intergenic | 40.0% |
!! | ACAACGACTTGGTTTGATTC+AGG | + | chr7.4:85376545-85376564 | MS.gene91620:CDS | 40.0% |
!! | GGTGTTATTGAACAACGACT+TGG | + | chr7.4:85376534-85376553 | MS.gene91620:CDS | 40.0% |
AGAAGGAAGAGGGGAAGATA+GGG | + | chr7.4:85376448-85376467 | MS.gene91620:CDS | 45.0% | |
AGTCTTGGAGAACAATCTCG+AGG | + | chr7.4:85377763-85377782 | MS.gene91620:CDS | 45.0% | |
CAATGCTTTGTATTCGGACG+AGG | + | chr7.4:85377400-85377419 | MS.gene91620:CDS | 45.0% | |
CTGTTATCATCTTCGGTACC+TGG | - | chr7.4:85377683-85377702 | None:intergenic | 45.0% | |
GAAATCTACCAGGAGATGCT+TGG | - | chr7.4:85377709-85377728 | None:intergenic | 45.0% | |
GAAGATAGGGAGAGAAAAGG+AGG | + | chr7.4:85376461-85376480 | MS.gene91620:CDS | 45.0% | |
GATCGAAACGAGACATACTC+AGG | - | chr7.4:85376819-85376838 | None:intergenic | 45.0% | |
GCAACCTGCTTATCCAGAAT+AGG | + | chr7.4:85376781-85376800 | MS.gene91620:CDS | 45.0% | |
GGAGGATGATATCGATAAGG+AGG | + | chr7.4:85376479-85376498 | MS.gene91620:CDS | 45.0% | |
GGATCATATTCGGAGACGAA+TGG | + | chr7.4:85377882-85377901 | MS.gene91620:CDS | 45.0% | |
GTTGCCTATTCTGGATAAGC+AGG | - | chr7.4:85376788-85376807 | None:intergenic | 45.0% | |
TCAACAACGCCTTTAGTTGG+TGG | + | chr7.4:85377527-85377546 | MS.gene91620:CDS | 45.0% | |
TCCTGGTAGATTTCCCTCAA+TGG | + | chr7.4:85377715-85377734 | MS.gene91620:CDS | 45.0% | |
TCGGCTTCGAGGATATTTAC+AGG | + | chr7.4:85378065-85378084 | MS.gene91620:CDS | 45.0% | |
TGATATCGATAAGGAGGACG+AGG | + | chr7.4:85376485-85376504 | MS.gene91620:CDS | 45.0% | |
TGTAAATATCCTCGAAGCCG+AGG | - | chr7.4:85378066-85378085 | None:intergenic | 45.0% | |
TGTATCCCTCCACCAACTAA+AGG | - | chr7.4:85377539-85377558 | None:intergenic | 45.0% | |
TTCAGCTTCGCGAAGATTTG+CGG | + | chr7.4:85378116-85378135 | MS.gene91620:CDS | 45.0% | |
TTCTTCAGACGGCTATGACA+CGG | + | chr7.4:85376742-85376761 | MS.gene91620:CDS | 45.0% | |
!! | ATCAATTTCTCGGGTTGGTG+AGG | - | chr7.4:85377332-85377351 | None:intergenic | 45.0% |
!! | CACGAGGTTCTGAACAGATT+GGG | + | chr7.4:85377449-85377468 | MS.gene91620:CDS | 45.0% |
!! | CCAACTAAAGGCGTTGTTGA+CGG | - | chr7.4:85377527-85377546 | None:intergenic | 45.0% |
AACAGAAGCCAAGCATCTCC+TGG | + | chr7.4:85377698-85377717 | MS.gene91620:CDS | 50.0% | |
AGCGAGGAAGATGCTGTTGA+TGG | + | chr7.4:85376840-85376859 | MS.gene91620:CDS | 50.0% | |
CCAATCTGTTCAGAACCTCG+TGG | - | chr7.4:85377451-85377470 | None:intergenic | 50.0% | |
CCGTCAACAACGCCTTTAGT+TGG | + | chr7.4:85377524-85377543 | MS.gene91620:CDS | 50.0% | |
CGTGTCAGGTGACGATGAAA+TGG | - | chr7.4:85377657-85377676 | None:intergenic | 50.0% | |
CTGAGATCAGGAATCACAGC+CGG | - | chr7.4:85376966-85376985 | None:intergenic | 50.0% | |
GAGAAGGAAGAGGGGAAGAT+AGG | + | chr7.4:85376447-85376466 | MS.gene91620:CDS | 50.0% | |
GATGAAGGAATTCACGCTCC+CGG | + | chr7.4:85377989-85378008 | MS.gene91620:CDS | 50.0% | |
GCCATTGAGGGAAATCTACC+AGG | - | chr7.4:85377719-85377738 | None:intergenic | 50.0% | |
GCGAGGAAGATGCTGTTGAT+GGG | + | chr7.4:85376841-85376860 | MS.gene91620:CDS | 50.0% | |
GCTCGCCTTCTCCGAAAATT+TGG | - | chr7.4:85377226-85377245 | None:intergenic | 50.0% | |
GCTTTGTATTCGGACGAGGT+TGG | + | chr7.4:85377404-85377423 | MS.gene91620:CDS | 50.0% | |
GGGGAAGATAGGGAGAGAAA+AGG | + | chr7.4:85376458-85376477 | MS.gene91620:CDS | 50.0% | |
GGTTCACTTTGAATGCCACG+AGG | + | chr7.4:85377433-85377452 | MS.gene91620:CDS | 50.0% | |
GTAGATTTCCCTCAATGGCG+CGG | + | chr7.4:85377720-85377739 | MS.gene91620:CDS | 50.0% | |
GTGGCATTCAAAGTGAACCG+AGG | - | chr7.4:85377432-85377451 | None:intergenic | 50.0% | |
TATCGATAAGGAGGACGAGG+TGG | + | chr7.4:85376488-85376507 | MS.gene91620:CDS | 50.0% | |
TCTTCGCGAAGCTGAACATC+TGG | - | chr7.4:85378112-85378131 | None:intergenic | 50.0% | |
TGGTGGAGGGATACATCCTT+TGG | + | chr7.4:85377544-85377563 | MS.gene91620:CDS | 50.0% | |
!! | ACAACGCCTTTAGTTGGTGG+AGG | + | chr7.4:85377530-85377549 | MS.gene91620:CDS | 50.0% |
!! | CAACGCCTTTAGTTGGTGGA+GGG | + | chr7.4:85377531-85377550 | MS.gene91620:CDS | 50.0% |
!! | CCACGAGGTTCTGAACAGAT+TGG | + | chr7.4:85377448-85377467 | MS.gene91620:CDS | 50.0% |
AAGCTTCTACCTCGGCTTCG+AGG | + | chr7.4:85378054-85378073 | MS.gene91620:CDS | 55.0% | |
AGGAATTGCCGCGCCATTGA+GGG | - | chr7.4:85377731-85377750 | None:intergenic | 55.0% | |
CGGCTGTGATTCCTGATCTC+AGG | + | chr7.4:85376964-85376983 | MS.gene91620:CDS | 55.0% | |
GTGGATGAGGAGGAGGAAGA+AGG | + | chr7.4:85376507-85376526 | MS.gene91620:CDS | 55.0% | |
TAAGGAGGACGAGGTGGATG+AGG | + | chr7.4:85376494-85376513 | MS.gene91620:CDS | 55.0% | |
TAGGAATTGCCGCGCCATTG+AGG | - | chr7.4:85377732-85377751 | None:intergenic | 55.0% | |
TGTCTCGTTTCGATCGAGCG+AGG | + | chr7.4:85376824-85376843 | MS.gene91620:CDS | 55.0% | |
! | GAGGAGGAGGAAGAAGGTGT+CGG | + | chr7.4:85376513-85376532 | MS.gene91620:CDS | 55.0% |
! | TTCGGACGAGGTTGGTTCCT+CGG | + | chr7.4:85377412-85377431 | MS.gene91620:CDS | 55.0% |
TCGGTACCTGGACTCGTGTC+AGG | - | chr7.4:85377671-85377690 | None:intergenic | 60.0% | |
TCGTCACCTGACACGAGTCC+AGG | + | chr7.4:85377662-85377681 | MS.gene91620:CDS | 60.0% | |
GGACGAGGTGGATGAGGAGG+AGG | + | chr7.4:85376500-85376519 | MS.gene91620:CDS | 65.0% | |
GGAGGACGAGGTGGATGAGG+AGG | + | chr7.4:85376497-85376516 | MS.gene91620:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 85376273 | 85378306 | 85376273 | ID=MS.gene91620 |
chr7.4 | mRNA | 85376273 | 85378306 | 85376273 | ID=MS.gene91620.t1;Parent=MS.gene91620 |
chr7.4 | exon | 85376273 | 85378306 | 85376273 | ID=MS.gene91620.t1.exon1;Parent=MS.gene91620.t1 |
chr7.4 | CDS | 85376273 | 85378306 | 85376273 | ID=cds.MS.gene91620.t1;Parent=MS.gene91620.t1 |
Gene Sequence |
Protein sequence |