AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91776


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91776.t1 MTR_8g006930 95.710 373 16 0 1 373 1 373 0.0 719
MS.gene91776.t1 MTR_7g078010 85.523 373 54 0 1 373 1 373 0.0 640
MS.gene91776.t1 MTR_4g119410 83.914 373 60 0 1 373 1 373 0.0 639
MS.gene91776.t1 MTR_7g056393 78.820 373 79 0 1 373 1 373 0.0 604
MS.gene91776.t1 MTR_7g056347 74.531 373 95 0 1 373 1 373 0.0 597
MS.gene91776.t1 MTR_8g063070 63.003 373 138 0 1 373 1 373 0.0 508
MS.gene91776.t1 MTR_1g093120 64.110 365 124 3 13 373 9 370 9.39e-178 498
MS.gene91776.t1 MTR_7g078010 85.417 288 42 0 1 288 1 288 1.62e-177 495
MS.gene91776.t1 MTR_4g024660 61.394 373 144 0 1 373 1 373 9.12e-177 496
MS.gene91776.t1 MTR_1g093110 62.873 369 129 3 11 373 8 374 1.39e-176 496
MS.gene91776.t1 MTR_8g062600 60.322 373 148 0 1 373 1 373 3.32e-174 489
MS.gene91776.t1 MTR_1g093140 62.264 371 130 3 12 373 9 378 3.75e-172 484
MS.gene91776.t1 MTR_8g469400 60.858 373 133 2 1 373 1 360 2.98e-167 471
MS.gene91776.t1 MTR_2g069010 60.000 360 140 3 17 373 17 375 1.23e-164 466
MS.gene91776.t1 MTR_2g068950 59.444 360 142 3 17 373 11 369 3.95e-160 454
MS.gene91776.t1 MTR_2g069020 59.889 359 139 3 17 373 15 370 1.68e-159 452
MS.gene91776.t1 MTR_2g069020 59.889 359 139 3 17 373 15 370 9.06e-159 451
MS.gene91776.t1 MTR_2g068960 58.889 360 144 3 17 373 11 369 1.74e-157 447
MS.gene91776.t1 MTR_2g069060 57.373 373 135 4 1 373 1 349 2.80e-155 441
MS.gene91776.t1 MTR_8g009090 54.447 371 156 5 6 373 4 364 2.40e-147 421
MS.gene91776.t1 MTR_8g028435 54.085 355 153 4 22 373 17 364 7.65e-146 417
MS.gene91776.t1 MTR_8g009160 52.055 365 168 4 11 373 5 364 3.49e-145 416
MS.gene91776.t1 MTR_8g009080 54.545 374 166 2 1 373 27 397 3.82e-144 414
MS.gene91776.t1 MTR_8g041620 50.532 376 181 3 1 373 1 374 7.56e-144 413
MS.gene91776.t1 MTR_8g041600 49.734 376 184 3 1 373 1 374 8.71e-143 410
MS.gene91776.t1 MTR_8g009170 53.501 357 154 6 22 373 17 366 1.05e-142 409
MS.gene91776.t1 MTR_2g069210 53.552 366 163 4 10 373 7 367 8.34e-142 407
MS.gene91776.t1 MTR_8g008930 52.547 373 163 6 5 373 3 365 3.29e-141 405
MS.gene91776.t1 MTR_2g069090 53.639 371 165 4 6 373 6 372 1.19e-140 404
MS.gene91776.t1 MTR_2g069300 53.203 359 161 4 18 373 4 358 3.67e-139 400
MS.gene91776.t1 MTR_8g009110 52.542 354 161 4 22 373 17 365 1.23e-138 399
MS.gene91776.t1 MTR_2g069190 54.190 358 158 3 18 373 18 371 1.90e-137 396
MS.gene91776.t1 MTR_4g117880 52.304 369 163 7 11 373 5 366 2.27e-132 383
MS.gene91776.t1 MTR_1g043770 51.247 361 169 4 13 373 2 355 9.75e-132 381
MS.gene91776.t1 MTR_1g043760 50.141 355 173 2 18 372 5 355 9.12e-130 376
MS.gene91776.t1 MTR_7g056353 52.316 367 147 3 6 372 8 346 1.23e-129 381
MS.gene91776.t1 MTR_1g043810 49.148 352 174 3 18 368 5 352 8.30e-126 366
MS.gene91776.t1 MTR_0032s0040 48.257 373 174 6 13 373 8 373 3.89e-123 360
MS.gene91776.t1 MTR_1g043775 49.148 352 174 3 18 368 5 352 1.14e-122 358
MS.gene91776.t1 MTR_7g029655 47.139 367 184 4 13 373 8 370 1.17e-120 353
MS.gene91776.t1 MTR_8g009150 47.740 354 158 5 22 373 17 345 2.62e-120 352
MS.gene91776.t1 MTR_8g009120 48.588 354 163 6 22 373 17 353 1.54e-117 345
MS.gene91776.t1 MTR_1g070185 47.207 358 180 3 17 373 18 367 9.95e-116 341
MS.gene91776.t1 MTR_8g009080 54.167 288 131 1 1 287 27 314 1.86e-108 321
MS.gene91776.t1 MTR_8g009080 53.684 285 131 1 1 284 27 311 4.85e-106 315
MS.gene91776.t1 MTR_8g041600 47.423 291 150 2 1 288 1 291 8.61e-106 313
MS.gene91776.t1 MTR_8g009170 52.593 270 120 4 22 287 17 282 3.15e-105 311
MS.gene91776.t1 MTR_2g069060 56.275 247 106 1 44 288 2 248 3.41e-104 307
MS.gene91776.t1 MTR_7g105070 44.044 361 196 4 15 373 6 362 1.96e-100 302
MS.gene91776.t1 MTR_1g043770 51.636 275 129 3 13 287 2 272 1.58e-99 297
MS.gene91776.t1 MTR_1g043810 49.815 271 134 2 18 287 5 274 4.64e-97 292
MS.gene91776.t1 MTR_1g043775 48.621 290 146 3 18 305 5 293 2.70e-96 289
MS.gene91776.t1 MTR_1g032220 41.360 353 196 5 17 366 21 365 1.71e-87 269
MS.gene91776.t1 MTR_7g056370 63.736 182 66 0 27 208 6 187 2.19e-87 263
MS.gene91776.t1 MTR_1g032140 42.061 359 197 5 17 372 14 364 2.20e-87 268
MS.gene91776.t1 MTR_1g032250 40.274 365 205 6 6 365 8 364 4.51e-85 263
MS.gene91776.t1 MTR_8g009180 51.004 249 99 3 138 368 46 289 5.41e-84 257
MS.gene91776.t1 MTR_1g043840 47.500 200 98 4 162 355 27 225 9.23e-58 191
MS.gene91776.t1 MTR_1g043840 39.474 76 45 1 75 150 254 328 6.67e-12 66.2
MS.gene91776.t1 MTR_5g032870 33.968 315 195 5 66 373 37 345 4.21e-56 187
MS.gene91776.t1 MTR_6g015950 38.264 311 168 10 60 361 32 327 2.76e-55 185
MS.gene91776.t1 MTR_7g102820 33.699 365 210 10 32 373 25 380 1.95e-54 184
MS.gene91776.t1 MTR_4g099380 53.049 164 70 3 19 180 124 282 4.94e-54 180
MS.gene91776.t1 MTR_8g024120 32.907 313 195 4 66 373 41 343 1.53e-52 178
MS.gene91776.t1 MTR_1g062110 32.682 358 215 8 32 373 26 373 2.30e-52 178
MS.gene91776.t1 MTR_3g092890 32.692 312 193 6 66 372 37 336 3.76e-52 177
MS.gene91776.t1 MTR_2g069070 49.444 180 73 2 1 180 1 162 6.30e-52 171
MS.gene91776.t1 MTR_3g091350 32.733 333 200 10 33 354 23 342 6.53e-52 177
MS.gene91776.t1 MTR_5g082750 33.807 352 215 9 31 372 12 355 3.40e-51 175
MS.gene91776.t1 MTR_1g070085 31.198 359 217 7 23 372 1 338 1.14e-50 173
MS.gene91776.t1 MTR_1g070085 31.198 359 217 7 23 372 1 338 1.14e-50 173
MS.gene91776.t1 MTR_5g032880 33.227 313 188 5 66 371 37 335 1.83e-50 179
MS.gene91776.t1 MTR_5g032880 32.698 315 199 5 66 373 375 683 2.12e-48 174
MS.gene91776.t1 MTR_7g068650 30.471 361 230 8 23 369 5 358 2.30e-50 172
MS.gene91776.t1 MTR_1g070135 34.185 313 189 6 66 372 37 338 3.25e-50 172
MS.gene91776.t1 MTR_3g063180 30.726 358 220 12 31 373 8 352 5.35e-50 171
MS.gene91776.t1 MTR_4g015790 30.685 365 217 11 31 369 12 366 7.35e-50 172
MS.gene91776.t1 MTR_3g091360 31.157 337 219 8 23 354 7 335 2.00e-48 167
MS.gene91776.t1 MTR_2g072910 30.172 348 228 8 32 373 16 354 2.61e-48 167
MS.gene91776.t1 MTR_1g070080 33.123 317 189 6 66 373 37 339 5.31e-48 166
MS.gene91776.t1 MTR_5g065010 32.092 349 221 9 32 373 3 342 8.18e-48 165
MS.gene91776.t1 MTR_7g102720 32.595 316 189 6 62 369 32 331 2.90e-47 164
MS.gene91776.t1 MTR_0009s0050 29.721 323 205 8 60 373 39 348 1.25e-46 162
MS.gene91776.t1 MTR_0009s0050 29.721 323 205 8 60 373 39 348 1.54e-46 162
MS.gene91776.t1 MTR_4g093840 32.372 312 199 7 67 373 62 366 2.93e-46 162
MS.gene91776.t1 MTR_3g070860 32.000 325 202 9 58 372 41 356 4.40e-46 161
MS.gene91776.t1 MTR_1g034120 31.928 332 186 8 49 355 14 330 5.58e-46 161
MS.gene91776.t1 MTR_7g016090 32.026 306 181 8 66 361 38 326 8.19e-46 160
MS.gene91776.t1 MTR_7g016090 32.026 306 181 8 66 361 40 328 9.65e-46 160
MS.gene91776.t1 MTR_2g072890 29.283 321 212 7 59 373 44 355 1.05e-45 160
MS.gene91776.t1 MTR_3g083370 35.216 301 171 13 66 359 3 286 1.52e-45 159
MS.gene91776.t1 MTR_5g055820 27.920 351 231 8 32 373 12 349 1.73e-45 160
MS.gene91776.t1 MTR_1g070120 31.788 302 183 7 66 358 37 324 2.25e-45 159
MS.gene91776.t1 MTR_1g034060 31.928 332 186 8 49 355 14 330 4.15e-45 159
MS.gene91776.t1 MTR_5g085330 33.762 311 181 12 65 365 3 298 4.22e-45 157
MS.gene91776.t1 MTR_5g055680 30.211 331 197 9 58 373 37 348 4.88e-45 158
MS.gene91776.t1 MTR_5g048850 30.172 348 218 11 32 369 12 344 6.76e-45 158
MS.gene91776.t1 MTR_5g048570 27.528 356 223 8 32 373 12 346 7.55e-45 158
MS.gene91776.t1 MTR_1g034140 32.288 319 181 9 67 365 27 330 1.91e-44 157
MS.gene91776.t1 MTR_2g025120 32.468 308 185 12 66 365 3 295 2.29e-44 155
MS.gene91776.t1 MTR_4g087110 30.702 342 192 8 49 367 14 333 2.52e-44 156
MS.gene91776.t1 MTR_5g048740 30.659 349 222 8 33 373 11 347 3.43e-44 156
MS.gene91776.t1 MTR_2g068840 29.787 376 227 12 8 368 3 356 5.71e-44 156
MS.gene91776.t1 MTR_4g087100 32.456 342 191 12 49 366 14 339 1.63e-43 154
MS.gene91776.t1 MTR_4g087090 30.968 310 179 9 66 353 29 325 3.64e-43 153
MS.gene91776.t1 MTR_2g083030 30.375 293 189 3 62 353 32 310 4.70e-43 152
MS.gene91776.t1 MTR_0328s0030 28.448 348 232 7 32 373 10 346 5.67e-43 153
MS.gene91776.t1 MTR_4g087120 31.627 332 187 10 49 356 14 329 2.45e-42 151
MS.gene91776.t1 MTR_5g055900 28.011 357 222 9 32 373 12 348 2.97e-42 151
MS.gene91776.t1 MTR_3g058610 33.460 263 164 7 61 315 33 292 3.47e-42 151
MS.gene91776.t1 MTR_3g045230 31.214 346 218 9 32 369 17 350 3.98e-42 150
MS.gene91776.t1 MTR_1g044105 42.262 168 90 3 18 179 5 171 5.33e-42 145
MS.gene91776.t1 MTR_7g062580 28.981 314 204 8 67 373 55 356 8.51e-42 150
MS.gene91776.t1 MTR_2g437380 29.538 325 193 10 67 373 50 356 1.33e-41 149
MS.gene91776.t1 MTR_7g062570 29.060 351 225 11 33 373 20 356 1.60e-41 149
MS.gene91776.t1 MTR_3g043900 31.214 346 217 9 32 369 17 349 2.86e-41 148
MS.gene91776.t1 MTR_8g075890 32.946 258 160 6 67 315 39 292 4.75e-41 148
MS.gene91776.t1 MTR_1g048940 29.915 351 213 13 38 373 18 350 4.88e-41 148
MS.gene91776.t1 MTR_8g064200 26.891 357 227 7 32 373 22 359 1.54e-40 147
MS.gene91776.t1 MTR_1g062110 31.597 288 170 7 32 303 26 302 1.55e-40 145
MS.gene91776.t1 MTR_8g064200 26.891 357 227 7 32 373 17 354 1.70e-40 146
MS.gene91776.t1 MTR_0009s0480 27.954 347 233 7 33 373 12 347 3.59e-40 145
MS.gene91776.t1 MTR_4g087140 31.325 332 185 11 57 356 10 330 4.03e-40 145
MS.gene91776.t1 MTR_5g055690 27.794 349 234 7 32 373 12 349 5.07e-40 145
MS.gene91776.t1 MTR_7g081710 29.683 347 225 7 35 373 16 351 1.35e-39 144
MS.gene91776.t1 MTR_1g033810 28.443 334 221 9 41 366 20 343 1.55e-39 144
MS.gene91776.t1 MTR_5g048550 26.197 355 231 6 32 373 12 348 1.98e-39 144
MS.gene91776.t1 MTR_5g022020 31.915 282 179 6 67 339 39 316 2.60e-39 143
MS.gene91776.t1 MTR_3g088565 30.645 310 183 12 65 360 1 292 2.93e-39 142
MS.gene91776.t1 MTR_7g016080 29.260 311 187 9 67 368 41 327 3.09e-39 142
MS.gene91776.t1 MTR_5g055800 27.089 347 237 5 32 373 12 347 5.20e-39 142
MS.gene91776.t1 MTR_2g102570 31.790 324 181 13 67 371 52 354 1.04e-38 142
MS.gene91776.t1 MTR_2g083000 28.763 299 181 5 64 353 30 305 2.21e-38 140
MS.gene91776.t1 MTR_5g048470 27.841 352 231 11 32 373 17 355 2.68e-38 140
MS.gene91776.t1 MTR_7g063730 29.467 319 198 12 66 373 63 365 3.67e-38 140
MS.gene91776.t1 MTR_5g011250 29.794 339 217 9 33 356 8 340 4.89e-38 140
MS.gene91776.t1 MTR_1g070135 36.245 229 135 5 66 288 37 260 5.80e-38 138
MS.gene91776.t1 MTR_8g074050 30.312 320 205 9 61 373 46 354 8.82e-38 139
MS.gene91776.t1 MTR_1g070085 30.996 271 167 4 111 372 1 260 1.30e-37 136
MS.gene91776.t1 MTR_8g075830 32.296 257 163 6 67 315 39 292 1.70e-37 139
MS.gene91776.t1 MTR_6g464620 28.875 329 203 9 61 371 58 373 1.94e-37 139
MS.gene91776.t1 MTR_8g074070 29.781 319 208 9 61 373 46 354 2.26e-37 138
MS.gene91776.t1 MTR_1g070100 33.469 245 143 4 123 358 9 242 8.45e-37 134
MS.gene91776.t1 MTR_3g117420 27.554 323 210 8 61 373 46 354 1.16e-36 136
MS.gene91776.t1 MTR_0009s0050 30.901 233 145 3 142 373 33 250 3.72e-36 132
MS.gene91776.t1 MTR_0009s0050 30.901 233 145 3 142 373 33 250 4.39e-36 132
MS.gene91776.t1 MTR_3g072820 29.781 319 203 8 44 353 18 324 4.69e-36 134
MS.gene91776.t1 MTR_4g116010 29.801 302 193 8 67 361 50 339 7.07e-36 134
MS.gene91776.t1 MTR_1g102070 30.097 309 181 8 61 349 53 346 8.72e-36 134
MS.gene91776.t1 MTR_7g062600 29.260 311 194 11 67 366 51 346 1.09e-35 134
MS.gene91776.t1 MTR_7g062550 27.469 324 196 10 67 373 60 361 1.45e-35 134
MS.gene91776.t1 MTR_5g059130 29.664 327 207 10 38 354 14 327 9.38e-35 130
MS.gene91776.t1 MTR_5g059140 30.745 322 190 11 38 343 12 316 1.01e-34 130
MS.gene91776.t1 MTR_7g062560 26.537 309 208 6 67 373 62 353 1.11e-34 131
MS.gene91776.t1 MTR_3g026150 27.059 340 229 9 32 363 23 351 1.25e-34 131
MS.gene91776.t1 MTR_7g451860 28.475 295 184 5 67 353 41 316 1.95e-34 130
MS.gene91776.t1 MTR_7g047670 28.475 295 184 5 67 353 41 316 1.95e-34 130
MS.gene91776.t1 MTR_7g045650 29.856 278 179 8 32 300 24 294 3.34e-34 129
MS.gene91776.t1 MTR_8g033380 29.316 307 189 6 64 354 51 345 3.87e-34 130
MS.gene91776.t1 MTR_2g068800 29.181 281 169 8 32 304 21 279 7.16e-34 127
MS.gene91776.t1 MTR_6g092620 29.924 264 161 9 65 316 1 252 8.27e-34 127
MS.gene91776.t1 MTR_0009s0050 35.057 174 106 2 201 373 1 168 9.23e-34 124
MS.gene91776.t1 MTR_5g005570 28.254 315 196 5 47 353 17 309 1.12e-33 127
MS.gene91776.t1 MTR_1g081840 29.560 318 184 12 59 354 46 345 4.48e-33 127
MS.gene91776.t1 MTR_8g074070 28.981 314 198 8 61 373 46 335 5.80e-33 126
MS.gene91776.t1 MTR_4g099390 64.706 85 29 1 289 373 1 84 2.08e-32 117
MS.gene91776.t1 MTR_2g072910 30.827 266 175 6 32 291 16 278 8.61e-32 121
MS.gene91776.t1 MTR_3g083370 33.043 230 138 9 66 288 3 223 1.74e-31 119
MS.gene91776.t1 MTR_3g040410 31.660 259 157 6 67 315 6 254 1.75e-31 121
MS.gene91776.t1 MTR_4g087130 30.351 313 185 8 67 356 26 328 4.07e-31 121
MS.gene91776.t1 MTR_3g096500 29.904 311 184 9 58 349 58 353 9.17e-31 121
MS.gene91776.t1 MTR_0056s0160 30.631 222 143 5 157 373 18 233 1.09e-30 117
MS.gene91776.t1 MTR_5g025050 29.730 296 180 11 67 355 5 279 1.73e-30 118
MS.gene91776.t1 MTR_8g093930 27.928 333 201 9 42 354 24 337 2.52e-30 119
MS.gene91776.t1 MTR_2g437380 29.104 268 166 8 123 373 2 262 3.96e-30 116
MS.gene91776.t1 MTR_2g025120 30.870 230 143 9 66 288 3 223 9.26e-30 114
MS.gene91776.t1 MTR_3g088745 28.657 335 197 11 42 354 14 328 1.03e-29 117
MS.gene91776.t1 MTR_4g074130 28.197 305 193 6 67 354 40 335 1.03e-29 117
MS.gene91776.t1 MTR_7g084360 49.701 167 37 2 181 346 10 130 1.17e-29 111
MS.gene91776.t1 MTR_3g072810 29.305 331 209 7 33 353 6 321 1.45e-29 116
MS.gene91776.t1 MTR_5g025060 28.522 291 163 11 66 353 5 253 1.59e-29 115
MS.gene91776.t1 MTR_1g011580 28.875 329 178 11 61 368 57 350 1.81e-29 117
MS.gene91776.t1 MTR_5g027230 29.210 291 186 9 66 353 5 278 2.05e-29 115
MS.gene91776.t1 MTR_5g048850 29.851 268 169 10 32 289 12 270 2.13e-29 115
MS.gene91776.t1 MTR_5g025090 27.653 311 205 9 66 373 4 297 2.30e-29 115
MS.gene91776.t1 MTR_0009s0480 27.444 266 181 6 32 291 11 270 1.22e-28 112
MS.gene91776.t1 MTR_1g027290 28.000 325 201 11 67 373 29 338 2.25e-28 113
MS.gene91776.t1 MTR_4g132770 42.446 139 69 6 228 363 32 162 1.13e-27 107
MS.gene91776.t1 MTR_1g032240 34.928 209 103 5 165 372 1 177 1.80e-27 107
MS.gene91776.t1 MTR_2g019370 27.160 324 198 10 67 372 28 331 3.66e-27 110
MS.gene91776.t1 MTR_5g055690 27.341 267 184 5 32 292 12 274 3.93e-27 108
MS.gene91776.t1 MTR_3g464530 28.378 296 166 9 58 332 25 295 3.98e-27 110
MS.gene91776.t1 MTR_8g093980 28.963 328 193 11 65 371 57 365 6.42e-27 110
MS.gene91776.t1 MTR_3g117485 26.667 300 205 7 61 353 43 334 1.07e-26 109
MS.gene91776.t1 MTR_3g026150 31.053 190 122 4 176 363 66 248 2.58e-26 106
MS.gene91776.t1 MTR_2g070870 28.846 312 183 12 66 362 27 314 3.50e-26 107
MS.gene91776.t1 MTR_4g123020 28.037 321 195 11 67 372 20 319 4.62e-26 107
MS.gene91776.t1 MTR_0009s0400 33.557 149 92 3 226 373 2 144 1.74e-25 100
MS.gene91776.t1 MTR_3g026150 28.030 264 177 8 33 288 24 282 2.91e-25 103
MS.gene91776.t1 MTR_1g070110 28.846 260 135 6 108 358 1 219 5.73e-25 102
MS.gene91776.t1 MTR_1g086550 28.024 339 190 14 65 373 18 332 4.42e-24 102
MS.gene91776.t1 MTR_8g461330 28.727 275 150 11 67 315 27 281 5.69e-24 101
MS.gene91776.t1 MTR_8g030880 27.362 307 188 10 66 354 4 293 3.25e-23 99.0
MS.gene91776.t1 MTR_7g077670 29.085 306 192 10 59 354 3 293 7.21e-23 98.2
MS.gene91776.t1 MTR_5g024940 26.174 298 167 11 66 353 5 259 2.03e-22 96.3
MS.gene91776.t1 MTR_2g033270 30.224 268 151 12 65 315 17 265 2.87e-22 96.3
MS.gene91776.t1 MTR_3g117485 26.437 261 178 6 99 353 10 262 1.82e-21 93.6
MS.gene91776.t1 MTR_6g088665 25.672 335 203 11 57 358 4 325 4.08e-20 90.5
MS.gene91776.t1 MTR_3g464530 27.381 252 138 8 58 288 25 252 4.84e-20 89.0
MS.gene91776.t1 MTR_8g008960 52.000 75 33 1 299 373 31 102 5.94e-20 84.3
MS.gene91776.t1 MTR_6g088665 25.595 336 203 11 57 358 4 326 6.02e-20 90.1
MS.gene91776.t1 MTR_4g115990 32.787 183 113 5 185 365 145 319 1.01e-19 89.4
MS.gene91776.t1 MTR_4g096840 25.240 313 198 10 67 362 29 322 6.05e-19 87.0
MS.gene91776.t1 MTR_1g027310 24.843 318 186 9 63 373 45 316 1.58e-18 85.9
MS.gene91776.t1 MTR_2g069130 47.368 95 44 2 71 163 12 102 4.57e-18 80.1
MS.gene91776.t1 MTR_8g102600 24.534 322 197 11 69 360 11 316 6.01e-18 84.3
MS.gene91776.t1 MTR_4g100600 25.879 313 200 10 60 354 2 300 7.65e-18 84.0
MS.gene91776.t1 MTR_4g100590 23.077 312 205 11 60 354 2 295 7.41e-15 75.1
MS.gene91776.t1 MTR_4g011720 23.699 346 194 13 60 371 2 311 1.79e-14 73.9
MS.gene91776.t1 MTR_1g032230 33.333 147 73 3 16 159 14 138 2.37e-14 72.8
MS.gene91776.t1 MTR_3g040440 48.438 64 33 0 238 301 15 78 2.48e-14 72.8
MS.gene91776.t1 MTR_8g102600 26.087 207 131 6 166 360 70 266 2.61e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91776.t1 AT5G59540 52.589 367 166 5 12 373 3 366 3.98e-138 398
MS.gene91776.t1 AT1G06620 51.667 360 170 2 15 373 9 365 2.71e-136 393
MS.gene91776.t1 AT1G06650 51.099 364 167 5 17 373 10 369 1.49e-132 384
MS.gene91776.t1 AT2G30840 51.923 364 166 5 15 373 3 362 3.03e-130 378
MS.gene91776.t1 AT2G30830 50.975 359 169 4 17 373 5 358 2.85e-129 375
MS.gene91776.t1 AT5G59530 48.611 360 179 4 17 373 8 364 2.11e-128 373
MS.gene91776.t1 AT1G06640 49.589 365 173 5 16 373 9 369 8.79e-126 367
MS.gene91776.t1 AT5G43450 50.418 359 170 3 18 373 9 362 4.43e-125 365
MS.gene91776.t1 AT2G30840 50.824 364 164 6 15 373 3 356 2.97e-124 362
MS.gene91776.t1 AT1G06645 48.774 367 170 6 16 373 22 379 3.74e-123 360
MS.gene91776.t1 AT5G43440 48.611 360 176 5 19 373 10 365 7.61e-123 359
MS.gene91776.t1 AT2G25450 48.045 358 182 3 17 373 5 359 4.42e-122 357
MS.gene91776.t1 AT1G03410 49.003 351 171 4 18 363 5 352 7.15e-122 356
MS.gene91776.t1 AT1G03410 49.003 351 171 4 18 363 42 389 1.20e-121 357
MS.gene91776.t1 AT1G04350 47.645 361 179 5 17 373 6 360 1.89e-121 355
MS.gene91776.t1 AT1G04380 49.518 311 151 2 63 373 41 345 2.24e-116 342
MS.gene91776.t1 AT1G03400 47.143 350 171 4 18 364 5 343 2.60e-114 337
MS.gene91776.t1 AT3G61400 44.865 370 192 6 9 369 1 367 4.08e-114 337
MS.gene91776.t1 AT1G03400 43.651 378 171 5 18 364 5 371 1.43e-107 320
MS.gene91776.t1 AT1G06620 51.095 274 133 1 15 287 9 282 5.90e-104 308
MS.gene91776.t1 AT5G59540 49.645 282 137 4 12 288 3 284 8.58e-101 300
MS.gene91776.t1 AT1G06650 50.360 278 131 3 17 288 10 286 5.97e-100 299
MS.gene91776.t1 AT2G30840 50.903 277 132 2 15 287 3 279 4.55e-99 296
MS.gene91776.t1 AT5G43450 48.571 280 139 2 18 294 9 286 1.32e-95 287
MS.gene91776.t1 AT1G06640 47.203 286 144 3 16 295 9 293 1.22e-94 285
MS.gene91776.t1 AT1G06640 48.029 279 138 3 16 288 9 286 9.23e-94 282
MS.gene91776.t1 AT5G43440 47.080 274 139 4 19 287 10 282 2.38e-92 278
MS.gene91776.t1 AT3G61400 44.097 288 153 4 9 288 1 288 5.40e-88 268
MS.gene91776.t1 AT1G04380 47.345 226 116 1 63 288 41 263 1.93e-81 250
MS.gene91776.t1 AT4G10500 36.013 311 187 6 66 372 43 345 1.53e-60 199
MS.gene91776.t1 AT4G10490 33.974 312 193 5 66 372 41 344 4.83e-59 195
MS.gene91776.t1 AT5G24530 33.731 335 199 6 41 371 23 338 3.27e-58 192
MS.gene91776.t1 AT3G13610 33.903 351 208 10 32 373 26 361 4.42e-56 187
MS.gene91776.t1 AT1G55290 33.238 349 206 8 32 369 25 357 2.66e-55 186
MS.gene91776.t1 AT5G05600 32.092 349 219 8 31 369 25 365 2.26e-51 176
MS.gene91776.t1 AT3G12900 31.871 342 219 7 32 369 21 352 6.48e-51 174
MS.gene91776.t1 AT2G38240 30.028 353 226 8 31 373 10 351 3.54e-50 172
MS.gene91776.t1 AT2G36690 33.239 355 213 8 32 373 20 363 2.06e-49 170
MS.gene91776.t1 AT2G36690 33.239 355 213 8 32 373 20 363 2.06e-49 170
MS.gene91776.t1 AT3G11180 30.966 352 219 9 31 369 54 394 2.59e-46 163
MS.gene91776.t1 AT4G16330 31.861 317 181 12 66 369 66 360 5.49e-45 159
MS.gene91776.t1 AT3G11180 30.226 354 223 9 31 371 54 396 6.15e-45 159
MS.gene91776.t1 AT1G78550 29.102 323 208 9 61 373 45 356 2.84e-43 154
MS.gene91776.t1 AT1G17020 29.080 337 222 9 45 373 31 358 3.00e-43 154
MS.gene91776.t1 AT1G62380 34.866 261 156 8 62 316 2 254 3.37e-43 153
MS.gene91776.t1 AT4G25310 30.564 337 215 10 44 373 29 353 6.07e-43 153
MS.gene91776.t1 AT1G77330 33.333 264 154 8 65 316 1 254 6.06e-42 149
MS.gene91776.t1 AT2G44800 30.321 343 223 9 19 354 2 335 6.62e-42 150
MS.gene91776.t1 AT4G25300 28.488 344 229 9 38 373 22 356 7.34e-42 150
MS.gene91776.t1 AT1G12010 34.351 262 156 9 62 316 2 254 3.34e-41 147
MS.gene91776.t1 AT4G22880 30.205 341 214 9 33 356 7 340 1.20e-40 147
MS.gene91776.t1 AT4G22880 30.205 341 214 9 33 356 7 340 1.20e-40 147
MS.gene91776.t1 AT4G22880 30.205 341 214 9 33 356 7 340 1.20e-40 147
MS.gene91776.t1 AT1G05010 35.714 280 157 12 66 337 3 267 1.58e-40 145
MS.gene91776.t1 AT3G19000 30.519 308 184 7 67 354 32 329 1.72e-40 146
MS.gene91776.t1 AT1G17010 28.571 315 207 8 67 373 54 358 3.63e-40 145
MS.gene91776.t1 AT5G08640 30.976 297 183 8 66 353 42 325 4.85e-39 142
MS.gene91776.t1 AT5G08640 30.976 297 183 8 66 353 42 325 4.85e-39 142
MS.gene91776.t1 AT3G51240 30.769 286 185 6 39 315 10 291 7.60e-39 142
MS.gene91776.t1 AT5G20400 28.902 346 227 8 33 369 9 344 1.05e-38 141
MS.gene91776.t1 AT3G55970 29.050 358 229 12 31 372 12 360 1.19e-38 142
MS.gene91776.t1 AT4G25420 29.677 310 194 5 59 354 53 352 1.30e-38 142
MS.gene91776.t1 AT3G19010 31.438 299 176 8 67 346 28 316 1.64e-38 141
MS.gene91776.t1 AT3G19010 31.438 299 176 8 67 346 28 316 1.64e-38 141
MS.gene91776.t1 AT5G63590 33.657 309 178 10 57 353 4 297 1.11e-37 138
MS.gene91776.t1 AT5G07480 31.000 300 186 7 67 354 44 334 1.58e-37 139
MS.gene91776.t1 AT1G15550 34.314 306 161 15 66 354 56 338 6.58e-37 137
MS.gene91776.t1 AT3G60290 28.650 363 237 12 20 372 3 353 1.03e-36 136
MS.gene91776.t1 AT5G05600 31.835 267 172 6 31 288 25 290 1.53e-36 134
MS.gene91776.t1 AT4G21200 29.012 324 191 7 38 353 21 313 1.14e-35 133
MS.gene91776.t1 AT1G80340 33.546 313 170 13 59 355 42 332 1.36e-35 133
MS.gene91776.t1 AT3G21420 28.219 365 231 13 21 369 9 358 1.42e-35 134
MS.gene91776.t1 AT1G80330 33.117 308 166 13 66 354 48 334 1.10e-34 131
MS.gene91776.t1 AT1G78550 27.465 284 188 7 98 373 5 278 1.73e-34 129
MS.gene91776.t1 AT5G12270 29.730 370 227 12 20 373 7 359 3.68e-34 130
MS.gene91776.t1 AT4G16330 30.566 265 157 9 117 369 5 254 3.50e-33 124
MS.gene91776.t1 AT5G20550 29.739 306 198 8 65 361 43 340 6.21e-33 126
MS.gene91776.t1 AT1G60980 28.788 330 206 8 59 371 49 366 8.90e-33 126
MS.gene91776.t1 AT1G50960 29.851 268 184 4 50 315 23 288 2.76e-32 124
MS.gene91776.t1 AT3G19010 32.292 288 158 12 67 346 28 286 2.95e-32 124
MS.gene91776.t1 AT2G19590 29.779 272 168 10 62 323 6 264 2.96e-32 123
MS.gene91776.t1 AT5G07200 29.226 349 221 10 22 354 15 353 4.60e-32 124
MS.gene91776.t1 AT3G19000 28.216 241 151 5 67 288 32 269 3.94e-31 119
MS.gene91776.t1 AT1G49390 27.139 339 229 8 33 361 9 339 7.66e-31 120
MS.gene91776.t1 AT5G63600 26.537 309 201 9 54 354 20 310 1.52e-30 119
MS.gene91776.t1 AT4G25420 30.000 240 150 4 59 284 53 288 2.43e-29 115
MS.gene91776.t1 AT5G63600 26.452 310 201 10 54 354 20 311 2.58e-29 115
MS.gene91776.t1 AT4G25310 27.761 335 196 12 45 373 31 325 5.20e-29 115
MS.gene91776.t1 AT5G54000 28.664 307 201 8 64 361 43 340 1.39e-28 114
MS.gene91776.t1 AT1G30040 28.165 316 184 10 66 362 30 321 1.78e-28 114
MS.gene91776.t1 AT4G25300 33.163 196 123 3 180 373 73 262 1.89e-28 112
MS.gene91776.t1 AT5G63595 26.766 269 176 5 43 311 2 249 6.38e-28 111
MS.gene91776.t1 AT5G51810 27.778 306 191 8 64 354 60 350 6.55e-28 113
MS.gene91776.t1 AT3G55970 29.044 272 178 9 31 288 12 282 5.63e-27 108
MS.gene91776.t1 AT3G51240 34.132 167 102 4 156 315 42 207 6.50e-27 108
MS.gene91776.t1 AT3G19010 28.689 244 151 6 67 291 28 267 3.83e-26 106
MS.gene91776.t1 AT4G21690 27.974 311 179 13 67 355 47 334 5.63e-26 107
MS.gene91776.t1 AT1G78440 26.398 322 185 12 67 363 18 312 2.02e-24 102
MS.gene91776.t1 AT5G07480 32.979 188 112 5 174 354 45 225 1.45e-23 98.6
MS.gene91776.t1 AT2G19590 29.787 235 144 9 99 323 26 249 2.66e-23 99.0
MS.gene91776.t1 AT5G43935 26.000 300 175 10 67 354 19 283 5.99e-23 97.8
MS.gene91776.t1 AT1G47990 29.080 337 174 15 67 372 15 317 8.05e-23 98.2
MS.gene91776.t1 AT1G44090 27.244 312 190 10 59 349 55 350 8.52e-23 99.0
MS.gene91776.t1 AT1G49390 27.239 268 179 7 102 361 1 260 1.18e-22 96.7
MS.gene91776.t1 AT5G51810 27.984 243 151 7 64 291 60 293 1.05e-21 94.4
MS.gene91776.t1 AT2G34555 27.019 322 177 11 67 362 27 316 1.07e-21 95.1
MS.gene91776.t1 AT4G23340 30.065 306 181 13 63 354 6 292 1.52e-21 94.4
MS.gene91776.t1 AT5G54000 28.253 269 175 8 102 361 1 260 1.97e-21 93.2
MS.gene91776.t1 AT5G63580 28.696 230 150 6 66 288 18 240 2.42e-21 92.4
MS.gene91776.t1 AT5G63580 29.204 226 146 6 66 284 18 236 3.28e-21 92.0
MS.gene91776.t1 AT1G14130 26.087 299 177 12 67 349 9 279 9.79e-20 89.0
MS.gene91776.t1 AT5G58660 26.444 329 180 12 65 360 32 331 1.33e-19 89.4
MS.gene91776.t1 AT1G30040 26.860 242 140 8 66 288 30 253 6.41e-19 85.9
MS.gene91776.t1 AT1G14120 25.000 300 179 14 67 349 8 278 1.93e-18 85.5
MS.gene91776.t1 AT1G14120 25.000 300 179 14 67 349 8 278 1.93e-18 85.5
MS.gene91776.t1 AT1G14120 25.000 300 179 14 67 349 8 278 1.93e-18 85.5
MS.gene91776.t1 AT3G47190 22.772 303 191 11 56 334 20 303 9.01e-18 84.0
MS.gene91776.t1 AT4G23340 33.146 178 105 6 185 354 3 174 1.56e-17 80.9
MS.gene91776.t1 AT2G06960 39.394 132 60 5 228 359 33 144 7.50e-17 77.4
MS.gene91776.t1 AT1G52820 23.529 323 213 9 65 371 10 314 2.49e-16 79.3
MS.gene91776.t1 AT1G02400 26.377 345 186 16 50 363 12 319 2.48e-15 76.6
MS.gene91776.t1 AT3G50210 24.573 293 179 10 66 323 7 292 4.07e-15 75.9
MS.gene91776.t1 AT3G50210 24.573 293 179 10 66 323 7 292 4.07e-15 75.9
MS.gene91776.t1 AT3G50210 24.573 293 179 10 66 323 7 292 4.07e-15 75.9
MS.gene91776.t1 AT5G58660 25.781 256 145 10 65 288 32 274 5.86e-14 72.0
MS.gene91776.t1 AT3G46490 24.390 328 213 8 57 358 2 320 1.10e-13 71.6
MS.gene91776.t1 AT3G46490 25.172 290 187 7 57 320 2 287 1.24e-13 71.2
MS.gene91776.t1 AT4G03070 28.866 194 123 5 186 371 133 319 3.18e-13 70.5
MS.gene91776.t1 AT1G35190 25.378 331 177 14 61 360 3 294 9.01e-13 68.9
MS.gene91776.t1 AT4G16765 25.888 197 130 5 167 354 47 236 1.48e-12 67.4
MS.gene91776.t1 AT4G16765 25.888 197 130 5 167 354 47 236 1.48e-12 67.4
MS.gene91776.t1 AT4G16765 25.888 197 130 5 167 354 47 236 1.48e-12 67.4
MS.gene91776.t1 AT1G35190 25.305 328 204 11 61 360 3 317 3.76e-12 67.0
MS.gene91776.t1 AT4G16765 27.950 161 105 4 167 318 47 205 5.75e-12 65.5
MS.gene91776.t1 AT3G46500 34.646 127 71 3 239 360 60 179 6.23e-12 64.3
MS.gene91776.t1 AT4G16765 33.333 123 70 4 237 354 75 190 1.58e-11 63.5
MS.gene91776.t1 AT3G50210 29.012 162 108 3 169 323 49 210 2.15e-11 63.9

Find 89 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAGAAAATAAAGAATT+TGG 0.091695 8.3:-81123125 MS.gene91776:CDS
CATGGCATGCACTTTGAATT+TGG 0.153051 8.3:+81123615 None:intergenic
AAGTTCTTCATGAAGATAAA+TGG 0.210423 8.3:-81122901 MS.gene91776:CDS
CATTACCATAAAAGATTTCT+TGG 0.225535 8.3:-81122030 MS.gene91776:CDS
GTCAAAGGTTTGGTGGAGTC+TGG 0.226876 8.3:-81123779 MS.gene91776:CDS
CCCTGAACCTGAATTAACTA+TGG 0.268558 8.3:-81122990 MS.gene91776:CDS
AAAGGTTTATGGTCCTATTA+AGG 0.275771 8.3:-81122090 MS.gene91776:CDS
TCTGAAAGCAGCTCCTTAAT+AGG 0.286985 8.3:+81122077 None:intergenic
GAAGGTACATCAAAGGTTTA+TGG 0.290841 8.3:-81122101 MS.gene91776:CDS
AATTAGTGGTTTCCTCTAAT+TGG 0.291896 8.3:+81123855 None:intergenic
CCCATAGTTAATTCAGGTTC+AGG 0.297523 8.3:+81122989 None:intergenic
GTCTTGGATGAAATGATTAA+TGG 0.300053 8.3:-81123548 MS.gene91776:CDS
TTAGTGGAAAACCTGCTAAT+TGG 0.309083 8.3:-81123427 MS.gene91776:CDS
CATATTGGTGGCACTTCATC+TGG 0.309175 8.3:+81123362 None:intergenic
GTCGAGCCCATAGTTAATTC+AGG 0.309585 8.3:+81122983 None:intergenic
CCTTCTTACCTCAAAGAGTT+TGG 0.316249 8.3:-81123058 MS.gene91776:CDS
ACCTTTGATGTACCTTCAAT+TGG 0.328992 8.3:+81122107 None:intergenic
TCTAATGTACTCTTGTTTAG+TGG 0.352733 8.3:-81123443 MS.gene91776:CDS
AGATTTCCAACTTCCCAGTA+TGG 0.360075 8.3:+81123732 None:intergenic
TCAAAGGTTTGGTGGAGTCT+GGG 0.361579 8.3:-81123778 MS.gene91776:CDS
TCACAGAAAATAAAGAATTT+GGG 0.361920 8.3:-81123124 MS.gene91776:CDS
AATACTTAACTTGGACTCAT+TGG 0.362533 8.3:+81123697 None:intergenic
TGAGTTCATTACCTGCATAT+TGG 0.379416 8.3:+81123347 None:intergenic
GCTGAAGGACTATTTACTTT+GGG 0.382708 8.3:-81123031 MS.gene91776:CDS
ATTCCACGCATGTTCCATAC+TGG 0.388165 8.3:-81123746 MS.gene91776:CDS
CAGCACAACCAAACTCTTTG+AGG 0.389498 8.3:+81123050 None:intergenic
TCTATCATAAGTGGAATTAG+TGG 0.391072 8.3:+81123841 None:intergenic
CCAAACTCTTTGAGGTAAGA+AGG 0.398784 8.3:+81123058 None:intergenic
TGCTGAAGGACTATTTACTT+TGG 0.400034 8.3:-81123032 MS.gene91776:CDS
ATTTCATCCAAGACATTAAC+GGG 0.401594 8.3:+81123557 None:intergenic
ATGGTAATGTCTTTGTAGAT+TGG 0.407974 8.3:+81122044 None:intergenic
TGAAATTCCCGTTAATGTCT+TGG 0.414215 8.3:-81123564 MS.gene91776:CDS
TTGTTGAATTCACAACTTGA+AGG 0.434509 8.3:+81121962 None:intergenic
AAAAGTAGGTGTCAAAGGTT+TGG 0.437565 8.3:-81123789 MS.gene91776:CDS
GGCACTTCATCTGGTTTGAA+TGG 0.438830 8.3:+81123371 None:intergenic
CATTTCATCCAAGACATTAA+CGG 0.440138 8.3:+81123556 None:intergenic
AAAGAGTTTGGTTGTGCTGA+AGG 0.454678 8.3:-81123046 MS.gene91776:CDS
GCTAATTGGAGAGATACATT+TGG 0.455532 8.3:-81123413 MS.gene91776:CDS
AGTTCTTCATGAAGATAAAT+GGG 0.458589 8.3:-81122900 MS.gene91776:CDS
TTCAAAGTGCATGCCATGAG+TGG 0.459370 8.3:-81123610 MS.gene91776:CDS
CCTTTGATGTACCTTCAATT+GGG 0.460323 8.3:+81122108 None:intergenic
AATGTATCTCTCCAATTAGC+AGG 0.471293 8.3:+81123416 None:intergenic
TTCAACTTCTCTATCATAAG+TGG 0.471483 8.3:+81123832 None:intergenic
CCTTAATGGAAAATCTTCCT+TGG 0.479612 8.3:-81121988 MS.gene91776:CDS
AAGCTCGCTACGGAAATTCT+CGG 0.481237 8.3:+81122149 None:intergenic
CATGTTCCATACTGGGAAGT+TGG 0.485930 8.3:-81123738 MS.gene91776:CDS
AATTCCCGTGACCCAATTGA+AGG 0.494961 8.3:-81122119 MS.gene91776:CDS
GTCAACGTTCCTCCGGTACA+TGG 0.496442 8.3:-81122878 MS.gene91776:CDS
GTAATGTCTTTGTAGATTGG+TGG 0.503861 8.3:+81122047 None:intergenic
CCATAGTTAATTCAGGTTCA+GGG 0.505790 8.3:+81122990 None:intergenic
GAAAGTACTATCAGTATGCT+TGG 0.508794 8.3:+81122961 None:intergenic
TATGTCTTTGAGATCTATGA+TGG 0.510723 8.3:+81123673 None:intergenic
TCATCTGGTTTGAATGGATG+AGG 0.513909 8.3:+81123377 None:intergenic
TATGATGGGAATACTTAACT+TGG 0.515210 8.3:+81123688 None:intergenic
TGTACCTTCAATTGGGTCAC+GGG 0.516559 8.3:+81122115 None:intergenic
TGTTGAATTCACAACTTGAA+GGG 0.521306 8.3:+81121963 None:intergenic
GATTCAAAAGTAGGTGTCAA+AGG 0.522120 8.3:-81123794 MS.gene91776:CDS
CAAACTCTTTGAGGTAAGAA+GGG 0.525173 8.3:+81123059 None:intergenic
ATGAAGTGCCACCAATATGC+AGG 0.527149 8.3:-81123358 MS.gene91776:intron
TAATGTCTTTGTAGATTGGT+GGG 0.528678 8.3:+81122048 None:intergenic
GTTCATTACCTGCATATTGG+TGG 0.532980 8.3:+81123350 None:intergenic
AGCTCGCTACGGAAATTCTC+GGG 0.535878 8.3:+81122150 None:intergenic
ATGTACCTTCAATTGGGTCA+CGG 0.539733 8.3:+81122114 None:intergenic
GTTAATTCAGGTTCAGGGCA+TGG 0.544520 8.3:+81122995 None:intergenic
CAAAGGTTTGGTGGAGTCTG+GGG 0.546548 8.3:-81123777 MS.gene91776:CDS
GGATCTCTTGTTGTAAACAT+AGG 0.549372 8.3:-81122857 MS.gene91776:CDS
TAAATGGGTCAACGTTCCTC+CGG 0.549817 8.3:-81122885 MS.gene91776:CDS
ATTACCTCTACACGTCGAGC+TGG 0.554369 8.3:+81123641 None:intergenic
AGTAGGTGTCAAAGGTTTGG+TGG 0.561816 8.3:-81123786 MS.gene91776:CDS
CCTGAACCTGAATTAACTAT+GGG 0.563014 8.3:-81122989 MS.gene91776:CDS
CAATCCAGCTCGACGTGTAG+AGG 0.563713 8.3:-81123645 MS.gene91776:CDS
TCAAAGTGCATGCCATGAGT+GGG 0.564534 8.3:-81123609 MS.gene91776:CDS
CCCAATTGAAGGTACATCAA+AGG 0.564592 8.3:-81122108 MS.gene91776:CDS
AATCTTTGAGTTGTTGTCAG+AGG 0.567229 8.3:-81123095 MS.gene91776:CDS
CTTCTACAAGACCAACTTGG+CGG 0.571279 8.3:-81122929 MS.gene91776:CDS
TTACTTCTACAAGACCAACT+TGG 0.576789 8.3:-81122932 MS.gene91776:CDS
GAACTTGAAGACCGCCAAGT+TGG 0.579899 8.3:+81122918 None:intergenic
GAGTTGTTGTCAGAGGCACT+AGG 0.582282 8.3:-81123088 MS.gene91776:CDS
TCACAACTTGAAGGGCTCCA+AGG 0.582867 8.3:+81121971 None:intergenic
TTCCACGCATGTTCCATACT+GGG 0.591560 8.3:-81123745 MS.gene91776:CDS
AAACATAGGAGATCTTCTAC+AGG 0.605442 8.3:-81122843 MS.gene91776:intron
ACAACAAGAGATCCATGTAC+CGG 0.623129 8.3:+81122866 None:intergenic
ATTCAGAAAGAAGCTCGCTA+CGG 0.628270 8.3:+81122139 None:intergenic
CGAGTCTTAGCACAACACAT+AGG 0.644734 8.3:-81122173 MS.gene91776:CDS
TTCCCAGTATGGAACATGCG+TGG 0.650649 8.3:+81123743 None:intergenic
CAAAGTGCATGCCATGAGTG+GGG 0.653741 8.3:-81123608 MS.gene91776:CDS
AATTCAGGTTCAGGGCATGG+TGG 0.681896 8.3:+81122998 None:intergenic
ATGTCTTTGAGATCTATGAT+GGG 0.696806 8.3:+81123674 None:intergenic
ACAAGAGATCCATGTACCGG+AGG 0.701011 8.3:+81122869 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATATAAAAACTGAGTA+AGG - chr8.3:81123296-81123315 MS.gene91776:intron 15.0%
!! CATATATAATCCATAAATAA+AGG + chr8.3:81122582-81122601 None:intergenic 15.0%
!! TAATGAACTCAATATTAATT+TGG - chr8.3:81122511-81122530 MS.gene91776:intron 15.0%
!! TCAAATTTAATTGTATATCT+AGG - chr8.3:81122556-81122575 MS.gene91776:intron 15.0%
!! TTAAGCTTAAAAATATGTTA+TGG - chr8.3:81123211-81123230 MS.gene91776:intron 15.0%
!! ATATTCTAAGTCCAAATATA+AGG - chr8.3:81123029-81123048 MS.gene91776:CDS 20.0%
!! TCAAAACAATATTCTGTTAA+AGG - chr8.3:81123246-81123265 MS.gene91776:intron 20.0%
!! TCACAGAAAATAAAGAATTT+GGG - chr8.3:81122722-81122741 MS.gene91776:intron 20.0%
!! TGAATTATTATAGTCATTGA+TGG - chr8.3:81122661-81122680 MS.gene91776:intron 20.0%
!! TTCACAGAAAATAAAGAATT+TGG - chr8.3:81122721-81122740 MS.gene91776:intron 20.0%
!!! AATGATTTTGCTTTTAGAAA+TGG + chr8.3:81123557-81123576 None:intergenic 20.0%
!!! GAATATTGTTTTGAATCATA+TGG + chr8.3:81123240-81123259 None:intergenic 20.0%
! AAAAAACACAAACCAATTAG+AGG - chr8.3:81121979-81121998 MS.gene91776:CDS 25.0%
! AAGTTCTTCATGAAGATAAA+TGG - chr8.3:81122945-81122964 MS.gene91776:CDS 25.0%
! AGTTCTTCATGAAGATAAAT+GGG - chr8.3:81122946-81122965 MS.gene91776:CDS 25.0%
! CATTACCATAAAAGATTTCT+TGG - chr8.3:81123816-81123835 MS.gene91776:CDS 25.0%
! TAAATCTTATGGCATAGTAA+GGG + chr8.3:81123337-81123356 None:intergenic 25.0%
! TTCACTATAATCACATTCTA+AGG + chr8.3:81123514-81123533 None:intergenic 25.0%
!! GGGTTTTACAAAAATAAATG+TGG + chr8.3:81123158-81123177 None:intergenic 25.0%
!! GTAAAACCCTTAATTTTGAA+AGG - chr8.3:81123169-81123188 MS.gene91776:intron 25.0%
!! TATATCTAGGCCTTTATTTA+TGG - chr8.3:81122569-81122588 MS.gene91776:intron 25.0%
!! TTTTTACCTAAACAAGCAAT+TGG + chr8.3:81123059-81123078 None:intergenic 25.0%
!!! TAAGAAAAGAGTTTTATACG+CGG - chr8.3:81122353-81122372 MS.gene91776:intron 25.0%
AAACTTCATTCTTCAAGACT+AGG + chr8.3:81123116-81123135 None:intergenic 30.0%
AAAGGTTTATGGTCCTATTA+AGG - chr8.3:81123756-81123775 MS.gene91776:CDS 30.0%
AATTAGTGGTTTCCTCTAAT+TGG + chr8.3:81121994-81122013 None:intergenic 30.0%
ATAGATGACCAATATACAAG+TGG + chr8.3:81123454-81123473 None:intergenic 30.0%
ATATATGAATTCTCCTCTCA+TGG - chr8.3:81122595-81122614 MS.gene91776:intron 30.0%
ATTTCATCCAAGACATTAAC+GGG + chr8.3:81122292-81122311 None:intergenic 30.0%
CATTTCATCCAAGACATTAA+CGG + chr8.3:81122293-81122312 None:intergenic 30.0%
CTTAAGAACCACTTGTATAT+TGG - chr8.3:81123443-81123462 MS.gene91776:CDS 30.0%
GAGCATAGTTGTAAATCTTA+TGG + chr8.3:81123348-81123367 None:intergenic 30.0%
GTAAATCTTATGGCATAGTA+AGG + chr8.3:81123338-81123357 None:intergenic 30.0%
GTCTTGGATGAAATGATTAA+TGG - chr8.3:81122298-81122317 MS.gene91776:intron 30.0%
GTGATGCCTTTCAAAATTAA+GGG + chr8.3:81123178-81123197 None:intergenic 30.0%
TAAGTCTTAAAGTCATAGCA+TGG + chr8.3:81123385-81123404 None:intergenic 30.0%
TAATGTCTTTGTAGATTGGT+GGG + chr8.3:81123801-81123820 None:intergenic 30.0%
TCTATCATAAGTGGAATTAG+TGG + chr8.3:81122008-81122027 None:intergenic 30.0%
TGTGATGCCTTTCAAAATTA+AGG + chr8.3:81123179-81123198 None:intergenic 30.0%
TTATAGTGAACTGCAATTGT+TGG - chr8.3:81123524-81123543 MS.gene91776:CDS 30.0%
TTCAACTTCTCTATCATAAG+TGG + chr8.3:81122017-81122036 None:intergenic 30.0%
! AATACTTAACTTGGACTCAT+TGG + chr8.3:81122152-81122171 None:intergenic 30.0%
! ATGGTAATGTCTTTGTAGAT+TGG + chr8.3:81123805-81123824 None:intergenic 30.0%
! TATGATGGGAATACTTAACT+TGG + chr8.3:81122161-81122180 None:intergenic 30.0%
! TCTAATGTACTCTTGTTTAG+TGG - chr8.3:81122403-81122422 MS.gene91776:intron 30.0%
!! AAGAAAAGAGTTTTATACGC+GGG - chr8.3:81122354-81122373 MS.gene91776:intron 30.0%
!! ATGTCTTTGAGATCTATGAT+GGG + chr8.3:81122175-81122194 None:intergenic 30.0%
!! GCTTTTGATGATTCAAAAGT+AGG - chr8.3:81122043-81122062 MS.gene91776:CDS 30.0%
!! TATGTCTTTGAGATCTATGA+TGG + chr8.3:81122176-81122195 None:intergenic 30.0%
AAAAGTAGGTGTCAAAGGTT+TGG - chr8.3:81122057-81122076 MS.gene91776:CDS 35.0%
AAACATAGGAGATCTTCTAC+AGG - chr8.3:81123003-81123022 MS.gene91776:CDS 35.0%
AATGTATCTCTCCAATTAGC+AGG + chr8.3:81122433-81122452 None:intergenic 35.0%
ACCTTTGATGTACCTTCAAT+TGG + chr8.3:81123742-81123761 None:intergenic 35.0%
CAATTGGACTGCCTTATATT+TGG + chr8.3:81123043-81123062 None:intergenic 35.0%
CCTGAACCTGAATTAACTAT+GGG - chr8.3:81122857-81122876 MS.gene91776:CDS 35.0%
CCTTAATGGAAAATCTTCCT+TGG - chr8.3:81123858-81123877 MS.gene91776:CDS 35.0%
CCTTTGATGTACCTTCAATT+GGG + chr8.3:81123741-81123760 None:intergenic 35.0%
GATTCAAAAGTAGGTGTCAA+AGG - chr8.3:81122052-81122071 MS.gene91776:CDS 35.0%
GCTAATTGGAGAGATACATT+TGG - chr8.3:81122433-81122452 MS.gene91776:intron 35.0%
GCTGAAGGACTATTTACTTT+GGG - chr8.3:81122815-81122834 MS.gene91776:intron 35.0%
GTAATGTCTTTGTAGATTGG+TGG + chr8.3:81123802-81123821 None:intergenic 35.0%
TGAAATTCCCGTTAATGTCT+TGG - chr8.3:81122282-81122301 MS.gene91776:intron 35.0%
TGAGTTCATTACCTGCATAT+TGG + chr8.3:81122502-81122521 None:intergenic 35.0%
TGCTGAAGGACTATTTACTT+TGG - chr8.3:81122814-81122833 MS.gene91776:intron 35.0%
TTACTTCTACAAGACCAACT+TGG - chr8.3:81122914-81122933 MS.gene91776:CDS 35.0%
TTAGTGGAAAACCTGCTAAT+TGG - chr8.3:81122419-81122438 MS.gene91776:intron 35.0%
TTTGATCATGATTCCATGAG+AGG + chr8.3:81122611-81122630 None:intergenic 35.0%
! ATGCGCCAAGAAATCTTTTA+TGG + chr8.3:81123824-81123843 None:intergenic 35.0%
! CCAAGGAAGATTTTCCATTA+AGG + chr8.3:81123861-81123880 None:intergenic 35.0%
! CCATAGTTAATTCAGGTTCA+GGG + chr8.3:81122859-81122878 None:intergenic 35.0%
! GAAGGTACATCAAAGGTTTA+TGG - chr8.3:81123745-81123764 MS.gene91776:CDS 35.0%
! GGATCTCTTGTTGTAAACAT+AGG - chr8.3:81122989-81123008 MS.gene91776:CDS 35.0%
! TTTTATGCAGAAGGCCTTAA+TGG - chr8.3:81123844-81123863 MS.gene91776:CDS 35.0%
!! AATCTTTGAGTTGTTGTCAG+AGG - chr8.3:81122751-81122770 MS.gene91776:intron 35.0%
!! CAAACTCTTTGAGGTAAGAA+GGG + chr8.3:81122790-81122809 None:intergenic 35.0%
!! GAAAGTACTATCAGTATGCT+TGG + chr8.3:81122888-81122907 None:intergenic 35.0%
AAAGAGTTTGGTTGTGCTGA+AGG - chr8.3:81122800-81122819 MS.gene91776:intron 40.0%
ACAACAAGAGATCCATGTAC+CGG + chr8.3:81122983-81123002 None:intergenic 40.0%
AGATTTCCAACTTCCCAGTA+TGG + chr8.3:81122117-81122136 None:intergenic 40.0%
ATGTACCTTCAATTGGGTCA+CGG + chr8.3:81123735-81123754 None:intergenic 40.0%
ATTCAGAAAGAAGCTCGCTA+CGG + chr8.3:81123710-81123729 None:intergenic 40.0%
CATGGCATGCACTTTGAATT+TGG + chr8.3:81122234-81122253 None:intergenic 40.0%
CCCTGAACCTGAATTAACTA+TGG - chr8.3:81122856-81122875 MS.gene91776:CDS 40.0%
CCTTCTTACCTCAAAGAGTT+TGG - chr8.3:81122788-81122807 MS.gene91776:intron 40.0%
GTTCATTACCTGCATATTGG+TGG + chr8.3:81122499-81122518 None:intergenic 40.0%
TCTGAAAAAATCCCCACTCA+TGG + chr8.3:81122252-81122271 None:intergenic 40.0%
TCTGAAAGCAGCTCCTTAAT+AGG + chr8.3:81123772-81123791 None:intergenic 40.0%
! CCCAATTGAAGGTACATCAA+AGG - chr8.3:81123738-81123757 MS.gene91776:CDS 40.0%
! CCCATAGTTAATTCAGGTTC+AGG + chr8.3:81122860-81122879 None:intergenic 40.0%
! TCATCTGGTTTGAATGGATG+AGG + chr8.3:81122472-81122491 None:intergenic 40.0%
! TTGGCGCATTTTTATGCAGA+AGG - chr8.3:81123835-81123854 MS.gene91776:CDS 40.0%
!! CCAAACTCTTTGAGGTAAGA+AGG + chr8.3:81122791-81122810 None:intergenic 40.0%
AAGCTCGCTACGGAAATTCT+CGG + chr8.3:81123700-81123719 None:intergenic 45.0%
AATTCCCGTGACCCAATTGA+AGG - chr8.3:81123727-81123746 MS.gene91776:CDS 45.0%
AGTAGGTGTCAAAGGTTTGG+TGG - chr8.3:81122060-81122079 MS.gene91776:CDS 45.0%
ATTCCACGCATGTTCCATAC+TGG - chr8.3:81122100-81122119 MS.gene91776:CDS 45.0%
CAGCACAACCAAACTCTTTG+AGG + chr8.3:81122799-81122818 None:intergenic 45.0%
CATGTTCCATACTGGGAAGT+TGG - chr8.3:81122108-81122127 MS.gene91776:CDS 45.0%
CGAGTCTTAGCACAACACAT+AGG - chr8.3:81123673-81123692 MS.gene91776:CDS 45.0%
CTTCTACAAGACCAACTTGG+CGG - chr8.3:81122917-81122936 MS.gene91776:CDS 45.0%
GGCAGTCCAATTGCTTGTTT+AGG - chr8.3:81123050-81123069 MS.gene91776:CDS 45.0%
GTCGAGCCCATAGTTAATTC+AGG + chr8.3:81122866-81122885 None:intergenic 45.0%
TAAATGGGTCAACGTTCCTC+CGG - chr8.3:81122961-81122980 MS.gene91776:CDS 45.0%
TCAAAGTGCATGCCATGAGT+GGG - chr8.3:81122237-81122256 MS.gene91776:intron 45.0%
TGTACCTTCAATTGGGTCAC+GGG + chr8.3:81123734-81123753 None:intergenic 45.0%
TTCAAAGTGCATGCCATGAG+TGG - chr8.3:81122236-81122255 MS.gene91776:intron 45.0%
TTCCACGCATGTTCCATACT+GGG - chr8.3:81122101-81122120 MS.gene91776:CDS 45.0%
! ATGAAGTGCCACCAATATGC+AGG - chr8.3:81122488-81122507 MS.gene91776:intron 45.0%
! CATATTGGTGGCACTTCATC+TGG + chr8.3:81122487-81122506 None:intergenic 45.0%
! GGCACTTCATCTGGTTTGAA+TGG + chr8.3:81122478-81122497 None:intergenic 45.0%
! GTTAATTCAGGTTCAGGGCA+TGG + chr8.3:81122854-81122873 None:intergenic 45.0%
!! GGACTCATTGGCTGAGTTTT+CGG + chr8.3:81122140-81122159 None:intergenic 45.0%
!! TCAAAGGTTTGGTGGAGTCT+GGG - chr8.3:81122068-81122087 MS.gene91776:CDS 45.0%
ACAAGAGATCCATGTACCGG+AGG + chr8.3:81122980-81122999 None:intergenic 50.0%
AGCTCGCTACGGAAATTCTC+GGG + chr8.3:81123699-81123718 None:intergenic 50.0%
ATTACCTCTACACGTCGAGC+TGG + chr8.3:81122208-81122227 None:intergenic 50.0%
CAAAGTGCATGCCATGAGTG+GGG - chr8.3:81122238-81122257 MS.gene91776:intron 50.0%
GAACTTGAAGACCGCCAAGT+TGG + chr8.3:81122931-81122950 None:intergenic 50.0%
TCACAACTTGAAGGGCTCCA+AGG + chr8.3:81123878-81123897 None:intergenic 50.0%
TTCCCAGTATGGAACATGCG+TGG + chr8.3:81122106-81122125 None:intergenic 50.0%
! AATTCAGGTTCAGGGCATGG+TGG + chr8.3:81122851-81122870 None:intergenic 50.0%
!! CAAAGGTTTGGTGGAGTCTG+GGG - chr8.3:81122069-81122088 MS.gene91776:CDS 50.0%
!! GAGTTGTTGTCAGAGGCACT+AGG - chr8.3:81122758-81122777 MS.gene91776:intron 50.0%
!! GTCAAAGGTTTGGTGGAGTC+TGG - chr8.3:81122067-81122086 MS.gene91776:CDS 50.0%
CAATCCAGCTCGACGTGTAG+AGG - chr8.3:81122201-81122220 MS.gene91776:CDS 55.0%
GTCAACGTTCCTCCGGTACA+TGG - chr8.3:81122968-81122987 MS.gene91776:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 81121971 81123897 81121971 ID=MS.gene91776
chr8.3 mRNA 81121971 81123897 81121971 ID=MS.gene91776.t1;Parent=MS.gene91776
chr8.3 exon 81123359 81123897 81123359 ID=MS.gene91776.t1.exon1;Parent=MS.gene91776.t1
chr8.3 CDS 81123359 81123897 81123359 ID=cds.MS.gene91776.t1;Parent=MS.gene91776.t1
chr8.3 exon 81122844 81123165 81122844 ID=MS.gene91776.t1.exon2;Parent=MS.gene91776.t1
chr8.3 CDS 81122844 81123165 81122844 ID=cds.MS.gene91776.t1;Parent=MS.gene91776.t1
chr8.3 exon 81121971 81122231 81121971 ID=MS.gene91776.t1.exon3;Parent=MS.gene91776.t1
chr8.3 CDS 81121971 81122231 81121971 ID=cds.MS.gene91776.t1;Parent=MS.gene91776.t1
Gene Sequence

>MS.gene91776

ATGGTGGTAAAAAACACAAACCAATTAGAGGAAACCACTAATTCCACTTATGATAGAGAAGTTGAAGTGAAAGCTTTTGATGATTCAAAAGTAGGTGTCAAAGGTTTGGTGGAGTCTGGGGTGTCGAAGATTCCACGCATGTTCCATACTGGGAAGTTGGAAATCTCCGAAAACTCAGCCAATGAGTCCAAGTTAAGTATTCCCATCATAGATCTCAAAGACATACACAACAATCCAGCTCGACGTGTAGAGGTAATTAGCCAAATTCAAAGTGCATGCCATGAGTGGGGATTTTTTCAGATAATTAATCATGAAATTCCCGTTAATGTCTTGGATGAAATGATTAATGGAATTAGTAAGTTTCACGAACAAGATGCTAATGTAAGAAAAGAGTTTTATACGCGGGATTTGAGCAAAAAAGTTATGTATTACTCTAATGTACTCTTGTTTAGTGGAAAACCTGCTAATTGGAGAGATACATTTGGTTTTGCTATTGCTCCTCATCCATTCAAACCAGATGAAGTGCCACCAATATGCAGGTAATGAACTCAATATTAATTTGGATTCTCACTCTCAAAATCATAATCAAATTTAATTGTATATCTAGGCCTTTATTTATGGATTATATATGAATTCTCCTCTCATGGAATCATGATCAAAAGTGCATTTCAGTAACAAAGCATGTACATTTGAATTATTATAGTCATTGATGGATTGATTGCATACTTGCAGAGATATTGTGATTGAATATTCACAGAAAATAAAGAATTTGGGTTTCAAAATCTTTGAGTTGTTGTCAGAGGCACTAGGATTTAACCCTTCTTACCTCAAAGAGTTTGGTTGTGCTGAAGGACTATTTACTTTGGGTCACTTCTATCCACCATGCCCTGAACCTGAATTAACTATGGGCTCGACCAAGCATACTGATAGTACTTTCATGACATTACTTCTACAAGACCAACTTGGCGGTCTTCAAGTTCTTCATGAAGATAAATGGGTCAACGTTCCTCCGGTACATGGATCTCTTGTTGTAAACATAGGAGATCTTCTACAGGTAAATATTCTAAGTCCAAATATAAGGCAGTCCAATTGCTTGTTTAGGTAAAAAATTTAGTATTAAAGAAACTTCTATGATTAGTTAGCCTAGTCTTGAAGAATGAAGTTTATCATTGCTTGAGCAAATACCACATTTATTTTTGTAAAACCCTTAATTTTGAAAGGCATCACATAAATTTTTACTTTAAGCTTAAAAATATGTTATGGCAGCCATATGATTCAAAACAATATTCTGTTAAAGGTTCTATTATTTTGATTGAACTCTTAATAATTATATAAAAACTGAGTAAGGCTTGTAGAAAGTATTCCCTTACTATGCCATAAGATTTACAACTATGCTCAAATATTATATTTTCCATGCTATGACTTTAAGACTTAAGTGATTCAAATAATCTCATTCAAACACTCTCTTCTTACTTAAGAACCACTTGTATATTGGTCATCTATTTGCTTGTATTTATTTGCAGAGAAAATAATGACTGATCCTTAGAATGTGATTATAGTGAACTGCAATTGTTGGCTAGAAACCATTTCTAAAAGCAAAATCATTGATTTCTTCATCATTGAAAGTTTGTCGTAATAGTTTTATCATTTTTTTATACTCTTGCAGCTTATCACAAATGACAAATTTGTAAGTGTTTTTCATCGAGTCTTAGCACAACACATAGGCCCGAGAATTTCCGTAGCGAGCTTCTTTCTGAATTCCCGTGACCCAATTGAAGGTACATCAAAGGTTTATGGTCCTATTAAGGAGCTGCTTTCAGAAGAAAACCCACCAATCTACAAAGACATTACCATAAAAGATTTCTTGGCGCATTTTTATGCAGAAGGCCTTAATGGAAAATCTTCCTTGGAGCCCTTCAAGTTGTGA

Protein sequence

>MS.gene91776.t1

MVVKNTNQLEETTNSTYDREVEVKAFDDSKVGVKGLVESGVSKIPRMFHTGKLEISENSANESKLSIPIIDLKDIHNNPARRVEVISQIQSACHEWGFFQIINHEIPVNVLDEMINGISKFHEQDANVRKEFYTRDLSKKVMYYSNVLLFSGKPANWRDTFGFAIAPHPFKPDEVPPICRDIVIEYSQKIKNLGFKIFELLSEALGFNPSYLKEFGCAEGLFTLGHFYPPCPEPELTMGSTKHTDSTFMTLLLQDQLGGLQVLHEDKWVNVPPVHGSLVVNIGDLLQLITNDKFVSVFHRVLAQHIGPRISVASFFLNSRDPIEGTSKVYGPIKELLSEENPPIYKDITIKDFLAHFYAEGLNGKSSLEPFKL