Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92577.t1 | XP_013454911.1 | 95.5 | 532 | 24 | 0 | 1 | 532 | 1 | 532 | 5.00E-305 | 1056.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92577.t1 | Q3HRQ2 | 72.2 | 514 | 138 | 2 | 22 | 531 | 9 | 521 | 1.5e-225 | 783.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92577.t1 | A0A072UGT2 | 95.5 | 532 | 24 | 0 | 1 | 532 | 1 | 532 | 3.6e-305 | 1056.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014446 | MS.gene92577 | PPI |
| MS.gene63972 | MS.gene92577 | PPI |
| MS.gene27027 | MS.gene92577 | PPI |
| MS.gene69423 | MS.gene92577 | PPI |
| MS.gene92577 | MS.gene82837 | PPI |
| MS.gene92577 | MS.gene064736 | PPI |
| MS.gene42280 | MS.gene92577 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92577.t1 | MTR_4g019520 | 95.489 | 532 | 24 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1003 |
| MS.gene92577.t1 | MTR_7g114530 | 47.228 | 523 | 255 | 11 | 28 | 531 | 49 | 569 | 1.38e-155 | 456 |
| MS.gene92577.t1 | MTR_1g023570 | 45.174 | 518 | 265 | 11 | 28 | 531 | 30 | 542 | 1.34e-149 | 440 |
| MS.gene92577.t1 | MTR_5g038410 | 44.074 | 540 | 247 | 14 | 42 | 531 | 1 | 535 | 9.45e-149 | 437 |
| MS.gene92577.t1 | MTR_6g004960 | 44.509 | 519 | 265 | 10 | 32 | 531 | 1 | 515 | 6.97e-148 | 434 |
| MS.gene92577.t1 | MTR_3g113210 | 44.592 | 527 | 264 | 12 | 28 | 531 | 33 | 554 | 1.53e-146 | 432 |
| MS.gene92577.t1 | MTR_8g102900 | 41.065 | 526 | 285 | 11 | 28 | 532 | 112 | 633 | 1.07e-135 | 407 |
| MS.gene92577.t1 | MTR_3g075520 | 42.549 | 510 | 273 | 10 | 42 | 532 | 1 | 509 | 6.94e-135 | 401 |
| MS.gene92577.t1 | MTR_6g088300 | 40.977 | 532 | 285 | 11 | 28 | 532 | 56 | 585 | 1.16e-131 | 395 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92577.t1 | AT3G53950 | 69.303 | 531 | 154 | 4 | 8 | 531 | 15 | 543 | 0.0 | 770 |
| MS.gene92577.t1 | AT1G75620 | 48.069 | 518 | 251 | 12 | 28 | 532 | 35 | 547 | 2.53e-159 | 465 |
| MS.gene92577.t1 | AT3G57620 | 46.228 | 517 | 256 | 12 | 30 | 531 | 37 | 546 | 3.99e-158 | 462 |
| MS.gene92577.t1 | AT1G14430 | 45.537 | 549 | 273 | 14 | 6 | 531 | 19 | 564 | 1.61e-148 | 438 |
| MS.gene92577.t1 | AT1G19900 | 44.701 | 519 | 270 | 10 | 28 | 531 | 31 | 547 | 2.15e-148 | 437 |
| MS.gene92577.t1 | AT5G19580 | 41.777 | 529 | 283 | 13 | 22 | 531 | 71 | 593 | 5.99e-132 | 396 |
| MS.gene92577.t1 | AT1G67290 | 41.333 | 525 | 283 | 13 | 27 | 531 | 95 | 614 | 1.22e-128 | 389 |
Find 165 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTATTGAAGTGAATTT+AGG | 0.266676 | 4.2:+82757302 | MS.gene92577:CDS |
| AGAGTGGCACGTGCTGATTT+TGG | 0.284080 | 4.2:-82755988 | None:intergenic |
| ACACCATACAATACCGTTTC+AGG | 0.285927 | 4.2:-82757239 | None:intergenic |
| ACCGGTTGGGTTACGGTTCA+TGG | 0.288813 | 4.2:+82757010 | MS.gene92577:CDS |
| AATCACACGGGTTGAATATT+CGG | 0.293301 | 4.2:-82756323 | None:intergenic |
| TAACGAAAACCGTGTGGTTC+GGG | 0.306132 | 4.2:+82756629 | MS.gene92577:CDS |
| TGAACGGAACACGGATATTC+CGG | 0.311507 | 4.2:+82756782 | MS.gene92577:CDS |
| TTGAGGCTATGCCTGCGTTT+TGG | 0.321803 | 4.2:-82756035 | None:intergenic |
| GTAACAATCCGGTTTGGTTT+TGG | 0.338595 | 4.2:-82756157 | None:intergenic |
| TAAAGTCTTGGCACAGTGCC+TGG | 0.354244 | 4.2:-82757041 | None:intergenic |
| ATCCGACCCGGTTTGGGAAA+TGG | 0.361268 | 4.2:+82756839 | MS.gene92577:CDS |
| GACGGGATCCGACCCGGTTT+GGG | 0.365091 | 4.2:+82756833 | MS.gene92577:CDS |
| TTAACGAAAACCGTGTGGTT+CGG | 0.369932 | 4.2:+82756628 | MS.gene92577:CDS |
| CGACGGGATCCGACCCGGTT+TGG | 0.384357 | 4.2:+82756832 | MS.gene92577:CDS |
| TCGGGTTTACCCGGAGTTAA+CGG | 0.387975 | 4.2:+82756647 | MS.gene92577:CDS |
| CGGGTTTACCCGGAGTTAAC+GGG | 0.388275 | 4.2:+82756648 | MS.gene92577:CDS |
| ATTATCCATTTGTGTATCTT+CGG | 0.390138 | 4.2:-82756529 | None:intergenic |
| CGTGTTTGCGAACACGAAAT+CGG | 0.404762 | 4.2:+82756593 | MS.gene92577:CDS |
| TGAGAGAATAATGGGTGATA+TGG | 0.406764 | 4.2:+82756875 | MS.gene92577:CDS |
| GTCAACGATTGGTCAAGCTT+GGG | 0.407088 | 4.2:+82757360 | MS.gene92577:CDS |
| TTTATATCGACCTGGTGAAC+CGG | 0.410632 | 4.2:+82756992 | MS.gene92577:CDS |
| TGCACCGCCAGGTTATTATA+TGG | 0.418499 | 4.2:+82757454 | MS.gene92577:CDS |
| TTATCCGTCGGCGGGTAGTT+CGG | 0.421655 | 4.2:+82756683 | MS.gene92577:CDS |
| TTCAACCCGTGTGATTCAAC+CGG | 0.427789 | 4.2:+82756330 | MS.gene92577:CDS |
| TATGCCGTTTGAGAGAATAA+TGG | 0.427793 | 4.2:+82756866 | MS.gene92577:CDS |
| TCGTGTTCGCAAACACGAAA+AGG | 0.428988 | 4.2:-82756587 | None:intergenic |
| ACTTCAATAATTCCCACAAC+TGG | 0.433336 | 4.2:-82757293 | None:intergenic |
| TCCGGTTCATTTCTCCCAAA+CGG | 0.438081 | 4.2:+82756255 | MS.gene92577:CDS |
| GTTGGCTCTGCGGTGGTCGA+TGG | 0.442039 | 4.2:+82757383 | MS.gene92577:CDS |
| TTCGACGGCGAATTTGTTAC+CGG | 0.447108 | 4.2:+82757067 | MS.gene92577:CDS |
| ACTAGAAGCTCCCACGTGCC+GGG | 0.449893 | 4.2:-82756012 | None:intergenic |
| ATTCAACCGGGTCATGCGAT+TGG | 0.450450 | 4.2:+82756343 | MS.gene92577:CDS |
| GACTAGAAGCTCCCACGTGC+CGG | 0.450544 | 4.2:-82756013 | None:intergenic |
| GGCGGGTAGTTCGGTGATGC+TGG | 0.450658 | 4.2:+82756692 | MS.gene92577:CDS |
| ATATCCTCCATTTCCCAAAC+CGG | 0.453250 | 4.2:-82756846 | None:intergenic |
| ATCGACCTGGTGAACCGGTT+GGG | 0.456060 | 4.2:+82756997 | MS.gene92577:CDS |
| ATTCCGGCACATGGGAGTTG+TGG | 0.456259 | 4.2:+82756798 | MS.gene92577:CDS |
| AAACCGGTGGTGACTTAGAC+GGG | 0.459453 | 4.2:+82756289 | MS.gene92577:CDS |
| ATGCCGTTTGAGAGAATAAT+GGG | 0.461994 | 4.2:+82756867 | MS.gene92577:CDS |
| ACCGACACATGGTGCTCGTC+CGG | 0.466507 | 4.2:+82756237 | MS.gene92577:CDS |
| CTGGTGAACCGGTTGGGTTA+CGG | 0.466700 | 4.2:+82757003 | MS.gene92577:CDS |
| ACCATGAACCGTAACCCAAC+CGG | 0.468515 | 4.2:-82757011 | None:intergenic |
| TTTGTAAAAGTGAACCGTTT+GGG | 0.469181 | 4.2:-82756269 | None:intergenic |
| CCGGTTCACCAAAACCAAAC+CGG | 0.470687 | 4.2:+82756149 | MS.gene92577:CDS |
| CCGTGTGGTTCGGGTTTACC+CGG | 0.471927 | 4.2:+82756638 | MS.gene92577:CDS |
| TTCCGGCACATGGGAGTTGT+GGG | 0.474976 | 4.2:+82756799 | MS.gene92577:CDS |
| TTCACCAGGTCGATATAAAA+CGG | 0.477041 | 4.2:-82756988 | None:intergenic |
| GGGTTGGACCGATGTTGGTT+CGG | 0.478378 | 4.2:-82756101 | None:intergenic |
| CTCGGTCCACCCGTTAACTC+CGG | 0.479222 | 4.2:-82756657 | None:intergenic |
| TCAGGCACTTCGAATATCTC+AGG | 0.481224 | 4.2:-82757221 | None:intergenic |
| TTCAACCGGGTCATGCGATT+GGG | 0.484013 | 4.2:+82756344 | MS.gene92577:CDS |
| GTGCAACCATCCCACTCGGT+GGG | 0.485681 | 4.2:-82757436 | None:intergenic |
| GATGCGGTGGTTGTTGTTTG+TGG | 0.487191 | 4.2:+82756735 | MS.gene92577:CDS |
| AGTGGGATGGTTGCACCGCC+AGG | 0.487641 | 4.2:+82757443 | MS.gene92577:CDS |
| CTCCCACGTGCCGGGGAGAG+TGG | 0.487933 | 4.2:-82756004 | None:intergenic |
| GGTCAACGATTGGTCAAGCT+TGG | 0.488405 | 4.2:+82757359 | MS.gene92577:CDS |
| GTTTGTAAAAGTGAACCGTT+TGG | 0.490635 | 4.2:-82756270 | None:intergenic |
| CTCTTCCCAATCGCATGACC+CGG | 0.491639 | 4.2:-82756349 | None:intergenic |
| ATGAGCGTAACAATCCGGTT+TGG | 0.492855 | 4.2:-82756163 | None:intergenic |
| CGAATTTGTTACCGGATGGA+AGG | 0.493268 | 4.2:+82757075 | MS.gene92577:CDS |
| TCGAATTAAGCGAAGGTCGT+TGG | 0.493274 | 4.2:+82756382 | MS.gene92577:CDS |
| AGTGTGCCTTTGCCAGTTGT+GGG | 0.497685 | 4.2:+82757281 | MS.gene92577:CDS |
| CGATTGGTCAAGCTTGGGGT+TGG | 0.500671 | 4.2:+82757365 | MS.gene92577:CDS |
| CGATGTTGGTTCGGTCTAAG+AGG | 0.501043 | 4.2:-82756092 | None:intergenic |
| TGGTCGATGGTGTTGGAAGG+TGG | 0.502054 | 4.2:+82757396 | MS.gene92577:CDS |
| TCGGTGATGCTGGCTTTAGA+AGG | 0.505095 | 4.2:+82756702 | MS.gene92577:CDS |
| GAGTGTGCCTTTGCCAGTTG+TGG | 0.506333 | 4.2:+82757280 | MS.gene92577:CDS |
| CAAACCGGTGGTGACTTAGA+CGG | 0.512760 | 4.2:+82756288 | MS.gene92577:CDS |
| GTGCCACTCTCCCCGGCACG+TGG | 0.516176 | 4.2:+82756001 | MS.gene92577:CDS |
| TCACCAGGTCGATATAAAAC+GGG | 0.517151 | 4.2:-82756987 | None:intergenic |
| TTAGGAAGAAGATGAACATA+TGG | 0.519523 | 4.2:-82756558 | None:intergenic |
| TATCGACCTGGTGAACCGGT+TGG | 0.521135 | 4.2:+82756996 | MS.gene92577:CDS |
| AACACGGATATTCCGGCACA+TGG | 0.521789 | 4.2:+82756789 | MS.gene92577:CDS |
| CGCCCACAACTCCCATGTGC+CGG | 0.522248 | 4.2:-82756801 | None:intergenic |
| CGTAACCCAACCGGTTCACC+AGG | 0.522888 | 4.2:-82757002 | None:intergenic |
| TCACCCATTATTCTCTCAAA+CGG | 0.523026 | 4.2:-82756870 | None:intergenic |
| GTTTGTGGCGGTGCTCAATA+CGG | 0.523510 | 4.2:+82756750 | MS.gene92577:CDS |
| CGGTGGTCGATGGTGTTGGA+AGG | 0.524502 | 4.2:+82757393 | MS.gene92577:CDS |
| ATCATCATCATCGGTGGAAG+AGG | 0.525188 | 4.2:+82756438 | MS.gene92577:CDS |
| ACCGTTTGGGAGAAATGAAC+CGG | 0.526643 | 4.2:-82756256 | None:intergenic |
| AAGGTGGAGGATCCGATGTA+TGG | 0.526774 | 4.2:+82757412 | MS.gene92577:CDS |
| TCGGTCCACCCGTTAACTCC+GGG | 0.528086 | 4.2:-82756656 | None:intergenic |
| AGAAACCGAAGATACACAAA+TGG | 0.528804 | 4.2:+82756524 | MS.gene92577:CDS |
| TTTACGGGTTGGACCGATGT+TGG | 0.532259 | 4.2:-82756106 | None:intergenic |
| ACTGAATGAGCGTAACAATC+CGG | 0.533549 | 4.2:-82756168 | None:intergenic |
| TCTGCGGTGGTCGATGGTGT+TGG | 0.534258 | 4.2:+82757389 | MS.gene92577:CDS |
| ATTATAAATGGAGCTATGAA+AGG | 0.537384 | 4.2:+82756924 | MS.gene92577:CDS |
| TCAGCACGTGCCACTCTCCC+CGG | 0.545608 | 4.2:+82755994 | MS.gene92577:CDS |
| CAAGCTTGGGGTTGGCTCTG+CGG | 0.545621 | 4.2:+82757373 | MS.gene92577:CDS |
| AAACGGTATTGTATGGTGTA+GGG | 0.552075 | 4.2:+82757243 | MS.gene92577:CDS |
| GTGCCACACTTGGCACACCT+TGG | 0.553755 | 4.2:-82757490 | None:intergenic |
| ATTTATAATCAAAACATCAC+CGG | 0.555102 | 4.2:-82756910 | None:intergenic |
| AACACGAAAAGGTTACCGTT+AGG | 0.555856 | 4.2:-82756576 | None:intergenic |
| AAAGTCTTGGCACAGTGCCT+GGG | 0.557778 | 4.2:-82757040 | None:intergenic |
| TATGTTCATCTTCTTCCTAA+CGG | 0.558720 | 4.2:+82756561 | MS.gene92577:CDS |
| CCGAGGAATTATCCGTCGGC+GGG | 0.561765 | 4.2:+82756675 | MS.gene92577:CDS |
| GCTTGGGGTTGGCTCTGCGG+TGG | 0.561916 | 4.2:+82757376 | MS.gene92577:CDS |
| CACTCGGTGGGGCCATACAT+CGG | 0.564008 | 4.2:-82757424 | None:intergenic |
| GAAACGGTATTGTATGGTGT+AGG | 0.566790 | 4.2:+82757242 | MS.gene92577:CDS |
| TGTATCCAACGTGCCACACT+TGG | 0.569532 | 4.2:-82757500 | None:intergenic |
| TCAACGATTGGTCAAGCTTG+GGG | 0.570845 | 4.2:+82757361 | MS.gene92577:CDS |
| ACGAATCAAATTCTTCCAGA+TGG | 0.571165 | 4.2:+82756411 | MS.gene92577:CDS |
| TTATCTGAATCCAAATACTC+AGG | 0.573512 | 4.2:-82757185 | None:intergenic |
| ATGATGATGATAGAACCATC+TGG | 0.574708 | 4.2:-82756426 | None:intergenic |
| GAATTTGTTACCGGATGGAA+GGG | 0.575020 | 4.2:+82757076 | MS.gene92577:CDS |
| CTAGAAGCTCCCACGTGCCG+GGG | 0.576047 | 4.2:-82756011 | None:intergenic |
| GCTAGTAAAACCCTTCCATC+CGG | 0.577472 | 4.2:-82757086 | None:intergenic |
| TTTGGGAGGAGTTTACGGGT+TGG | 0.577906 | 4.2:-82756117 | None:intergenic |
| ACAAACAACAACCACCGCAT+CGG | 0.579944 | 4.2:-82756733 | None:intergenic |
| GCCGTCGAATGATAAAGTCT+TGG | 0.580309 | 4.2:-82757053 | None:intergenic |
| TAAAACGATAAAACACATGT+GGG | 0.581204 | 4.2:-82757118 | None:intergenic |
| GATGTATGGCCCCACCGAGT+GGG | 0.582898 | 4.2:+82757426 | MS.gene92577:CDS |
| GATATTCGAAGTGCCTGAAA+CGG | 0.583385 | 4.2:+82757226 | MS.gene92577:CDS |
| GTGCCTGAAACGGTATTGTA+TGG | 0.585358 | 4.2:+82757236 | MS.gene92577:CDS |
| TTAAAACGATAAAACACATG+TGG | 0.585965 | 4.2:-82757119 | None:intergenic |
| ACGGCGAATTTGTTACCGGA+TGG | 0.587006 | 4.2:+82757071 | MS.gene92577:CDS |
| GGCGGTGCAACCATCCCACT+CGG | 0.587429 | 4.2:-82757440 | None:intergenic |
| AGAAAGCATATCACAAAGAG+AGG | 0.590228 | 4.2:-82755946 | None:intergenic |
| TGCAACCATCCCACTCGGTG+GGG | 0.594099 | 4.2:-82757435 | None:intergenic |
| CTCTTAGACCGAACCAACAT+CGG | 0.595788 | 4.2:+82756093 | MS.gene92577:CDS |
| GGTGCAACCATCCCACTCGG+TGG | 0.596224 | 4.2:-82757437 | None:intergenic |
| TATCCTCCATTTCCCAAACC+GGG | 0.596564 | 4.2:-82756845 | None:intergenic |
| GATATGGTAATTCTACCAAC+CGG | 0.597681 | 4.2:+82756891 | MS.gene92577:CDS |
| GCCAAGACTTTATCATTCGA+CGG | 0.597876 | 4.2:+82757052 | MS.gene92577:CDS |
| TCGATGGTGTTGGAAGGTGG+AGG | 0.600846 | 4.2:+82757399 | MS.gene92577:CDS |
| ATAATCAAAACATCACCGGT+TGG | 0.601564 | 4.2:-82756906 | None:intergenic |
| ATAATTCCCACAACTGGCAA+AGG | 0.601744 | 4.2:-82757287 | None:intergenic |
| CTCCATTTCCCAAACCGGGT+CGG | 0.602491 | 4.2:-82756841 | None:intergenic |
| CCCGCCGACGGATAATTCCT+CGG | 0.603356 | 4.2:-82756675 | None:intergenic |
| ATTAGCGACGGGATCCGACC+CGG | 0.604219 | 4.2:+82756827 | MS.gene92577:CDS |
| GCATATCACAAAGAGAGGAA+TGG | 0.608315 | 4.2:-82755941 | None:intergenic |
| CATGACCCGGTTGAATCACA+CGG | 0.611488 | 4.2:-82756336 | None:intergenic |
| GATGGTTCTATCATCATCAT+CGG | 0.611835 | 4.2:+82756429 | MS.gene92577:CDS |
| AAACCCGTCTAAGTCACCAC+CGG | 0.613702 | 4.2:-82756292 | None:intergenic |
| CGGCACATGGGAGTTGTGGG+CGG | 0.614233 | 4.2:+82756802 | MS.gene92577:CDS |
| TAAAGATGTTGAGTTTGCGA+CGG | 0.616862 | 4.2:+82757139 | MS.gene92577:CDS |
| TGCCACTCTCCCCGGCACGT+GGG | 0.618777 | 4.2:+82756002 | MS.gene92577:CDS |
| TGTGGGCGGATATTAGCGAC+GGG | 0.620984 | 4.2:+82756816 | MS.gene92577:CDS |
| GGTTCTATCATCATCATCGG+TGG | 0.629877 | 4.2:+82756432 | MS.gene92577:CDS |
| CCGGGTAAACCCGAACCACA+CGG | 0.638410 | 4.2:-82756638 | None:intergenic |
| TATGGCCCCACCGAGTGGGA+TGG | 0.638714 | 4.2:+82757430 | MS.gene92577:CDS |
| ACCGAGGAATTATCCGTCGG+CGG | 0.639122 | 4.2:+82756674 | MS.gene92577:CDS |
| TTGTGGGCGGATATTAGCGA+CGG | 0.639903 | 4.2:+82756815 | MS.gene92577:CDS |
| TCAACCCGTGTGATTCAACC+GGG | 0.642606 | 4.2:+82756331 | MS.gene92577:CDS |
| CGATGTATGGCCCCACCGAG+TGG | 0.643067 | 4.2:+82757425 | MS.gene92577:CDS |
| GTTTACCCGGAGTTAACGGG+TGG | 0.643181 | 4.2:+82756651 | MS.gene92577:CDS |
| CGACCCGGTTTGGGAAATGG+AGG | 0.646092 | 4.2:+82756842 | MS.gene92577:CDS |
| TGTTACTGTTGTGTGCATTG+AGG | 0.648238 | 4.2:-82756052 | None:intergenic |
| ATGGTGTTTGCTGTTAACCA+AGG | 0.651581 | 4.2:+82757473 | MS.gene92577:CDS |
| CGGAGTTAACGGGTGGACCG+AGG | 0.655464 | 4.2:+82756658 | MS.gene92577:CDS |
| GCAAACACCATATAATAACC+TGG | 0.656118 | 4.2:-82757461 | None:intergenic |
| ATCACCGAACTACCCGCCGA+CGG | 0.658505 | 4.2:-82756687 | None:intergenic |
| TATAAAACGGGATTCAAACA+CGG | 0.660384 | 4.2:-82756975 | None:intergenic |
| TGGACCGAGGAATTATCCGT+CGG | 0.669449 | 4.2:+82756671 | MS.gene92577:CDS |
| ACCGGACGAGCACCATGTGT+CGG | 0.670830 | 4.2:-82756238 | None:intergenic |
| ACGAGCACCATGTGTCGGTG+AGG | 0.671643 | 4.2:-82756233 | None:intergenic |
| AACGACGTCGAATTAAGCGA+AGG | 0.672371 | 4.2:+82756375 | MS.gene92577:CDS |
| GGAGCTATGAAAGGTACACA+AGG | 0.678870 | 4.2:+82756933 | MS.gene92577:CDS |
| GCGGTGGTTGTTGTTTGTGG+CGG | 0.680386 | 4.2:+82756738 | MS.gene92577:CDS |
| ACACGGATATTCCGGCACAT+GGG | 0.685239 | 4.2:+82756790 | MS.gene92577:CDS |
| ATGACCCGGTTGAATCACAC+GGG | 0.686842 | 4.2:-82756335 | None:intergenic |
| TAACCAAGGTGTGCCAAGTG+TGG | 0.694344 | 4.2:+82757487 | MS.gene92577:CDS |
| GTGTGCCAAGTGTGGCACGT+TGG | 0.703709 | 4.2:+82757495 | MS.gene92577:CDS |
| GAGCTTCTAGTCCAAAACGC+AGG | 0.706658 | 4.2:+82756024 | MS.gene92577:CDS |
| AACACCATATAATAACCTGG+CGG | 0.782194 | 4.2:-82757458 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAATCAAAACATCAC+CGG | - | chr4.2:82756913-82756932 | None:intergenic | 20.0% |
| ! | ATTATAAATGGAGCTATGAA+AGG | + | chr4.2:82756924-82756943 | MS.gene92577:CDS | 25.0% |
| ! | ATTATCCATTTGTGTATCTT+CGG | - | chr4.2:82756532-82756551 | None:intergenic | 25.0% |
| ! | GGAATTATTGAAGTGAATTT+AGG | + | chr4.2:82757302-82757321 | MS.gene92577:CDS | 25.0% |
| ! | TAAAACGATAAAACACATGT+GGG | - | chr4.2:82757121-82757140 | None:intergenic | 25.0% |
| ! | TTAAAACGATAAAACACATG+TGG | - | chr4.2:82757122-82757141 | None:intergenic | 25.0% |
| !!! | GGTGATGTTTTGATTATAAA+TGG | + | chr4.2:82756912-82756931 | MS.gene92577:CDS | 25.0% |
| GAAAAACTATGTGTAGCAAA+AGG | - | chr4.2:82757335-82757354 | None:intergenic | 30.0% | |
| TATAAAACGGGATTCAAACA+CGG | - | chr4.2:82756978-82756997 | None:intergenic | 30.0% | |
| TATGTTCATCTTCTTCCTAA+CGG | + | chr4.2:82756561-82756580 | MS.gene92577:CDS | 30.0% | |
| TTAGGAAGAAGATGAACATA+TGG | - | chr4.2:82756561-82756580 | None:intergenic | 30.0% | |
| TTATCTGAATCCAAATACTC+AGG | - | chr4.2:82757188-82757207 | None:intergenic | 30.0% | |
| TTTGTAAAAGTGAACCGTTT+GGG | - | chr4.2:82756272-82756291 | None:intergenic | 30.0% | |
| AAACGGTATTGTATGGTGTA+GGG | + | chr4.2:82757243-82757262 | MS.gene92577:CDS | 35.0% | |
| AACACCATATAATAACCTGG+CGG | - | chr4.2:82757461-82757480 | None:intergenic | 35.0% | |
| ACGAATCAAATTCTTCCAGA+TGG | + | chr4.2:82756411-82756430 | MS.gene92577:CDS | 35.0% | |
| ACTTCAATAATTCCCACAAC+TGG | - | chr4.2:82757296-82757315 | None:intergenic | 35.0% | |
| AGAAACCGAAGATACACAAA+TGG | + | chr4.2:82756524-82756543 | MS.gene92577:CDS | 35.0% | |
| ATAATCAAAACATCACCGGT+TGG | - | chr4.2:82756909-82756928 | None:intergenic | 35.0% | |
| GATATGGTAATTCTACCAAC+CGG | + | chr4.2:82756891-82756910 | MS.gene92577:CDS | 35.0% | |
| GCAAACACCATATAATAACC+TGG | - | chr4.2:82757464-82757483 | None:intergenic | 35.0% | |
| GTTTGTAAAAGTGAACCGTT+TGG | - | chr4.2:82756273-82756292 | None:intergenic | 35.0% | |
| TAAAGATGTTGAGTTTGCGA+CGG | + | chr4.2:82757139-82757158 | MS.gene92577:CDS | 35.0% | |
| TCACCCATTATTCTCTCAAA+CGG | - | chr4.2:82756873-82756892 | None:intergenic | 35.0% | |
| TTCACCAGGTCGATATAAAA+CGG | - | chr4.2:82756991-82757010 | None:intergenic | 35.0% | |
| ! | AATACGGTGCTTTTCTTGAA+CGG | + | chr4.2:82756766-82756785 | MS.gene92577:CDS | 35.0% |
| ! | AATCACACGGGTTGAATATT+CGG | - | chr4.2:82756326-82756345 | None:intergenic | 35.0% |
| ! | AGAAAGCATATCACAAAGAG+AGG | - | chr4.2:82755949-82755968 | None:intergenic | 35.0% |
| ! | ATGATGATGATAGAACCATC+TGG | - | chr4.2:82756429-82756448 | None:intergenic | 35.0% |
| ! | ATGCCGTTTGAGAGAATAAT+GGG | + | chr4.2:82756867-82756886 | MS.gene92577:CDS | 35.0% |
| ! | GATGGTTCTATCATCATCAT+CGG | + | chr4.2:82756429-82756448 | MS.gene92577:CDS | 35.0% |
| ! | GCTACACATAGTTTTTCACA+GGG | + | chr4.2:82757338-82757357 | MS.gene92577:CDS | 35.0% |
| ! | TATGCCGTTTGAGAGAATAA+TGG | + | chr4.2:82756866-82756885 | MS.gene92577:CDS | 35.0% |
| ! | TGCTACACATAGTTTTTCAC+AGG | + | chr4.2:82757337-82757356 | MS.gene92577:CDS | 35.0% |
| ! | TTTTACCCGAAACGCAAAAA+CGG | + | chr4.2:82756477-82756496 | MS.gene92577:CDS | 35.0% |
| !! | AACGGTTCACTTTTACAAAC+CGG | + | chr4.2:82756273-82756292 | MS.gene92577:CDS | 35.0% |
| !! | TGAGAGAATAATGGGTGATA+TGG | + | chr4.2:82756875-82756894 | MS.gene92577:CDS | 35.0% |
| !! | TGATTTTAACGAAAACCGTG+TGG | + | chr4.2:82756623-82756642 | MS.gene92577:CDS | 35.0% |
| !!! | ACAAGGTTTTGAAATGGGTT+CGG | + | chr4.2:82756950-82756969 | MS.gene92577:CDS | 35.0% |
| !!! | AGGTACACAAGGTTTTGAAA+TGG | + | chr4.2:82756944-82756963 | MS.gene92577:CDS | 35.0% |
| !!! | GGTACACAAGGTTTTGAAAT+GGG | + | chr4.2:82756945-82756964 | MS.gene92577:CDS | 35.0% |
| AACACGAAAAGGTTACCGTT+AGG | - | chr4.2:82756579-82756598 | None:intergenic | 40.0% | |
| ACACCATACAATACCGTTTC+AGG | - | chr4.2:82757242-82757261 | None:intergenic | 40.0% | |
| ACTGAATGAGCGTAACAATC+CGG | - | chr4.2:82756171-82756190 | None:intergenic | 40.0% | |
| ATAATTCCCACAACTGGCAA+AGG | - | chr4.2:82757290-82757309 | None:intergenic | 40.0% | |
| ATATCCTCCATTTCCCAAAC+CGG | - | chr4.2:82756849-82756868 | None:intergenic | 40.0% | |
| GAAACGGTATTGTATGGTGT+AGG | + | chr4.2:82757242-82757261 | MS.gene92577:CDS | 40.0% | |
| GCATATCACAAAGAGAGGAA+TGG | - | chr4.2:82755944-82755963 | None:intergenic | 40.0% | |
| GCCAAGACTTTATCATTCGA+CGG | + | chr4.2:82757052-82757071 | MS.gene92577:CDS | 40.0% | |
| TAAAAATCCTCACCGACACA+TGG | + | chr4.2:82756226-82756245 | MS.gene92577:CDS | 40.0% | |
| TCACCAGGTCGATATAAAAC+GGG | - | chr4.2:82756990-82757009 | None:intergenic | 40.0% | |
| TGTTACTGTTGTGTGCATTG+AGG | - | chr4.2:82756055-82756074 | None:intergenic | 40.0% | |
| TTAACGAAAACCGTGTGGTT+CGG | + | chr4.2:82756628-82756647 | MS.gene92577:CDS | 40.0% | |
| TTTATATCGACCTGGTGAAC+CGG | + | chr4.2:82756992-82757011 | MS.gene92577:CDS | 40.0% | |
| ! | AATCCCGTTTTATATCGACC+TGG | + | chr4.2:82756984-82757003 | MS.gene92577:CDS | 40.0% |
| ! | AGAAGGTGAATTTTCCGATG+CGG | + | chr4.2:82756719-82756738 | MS.gene92577:CDS | 40.0% |
| ! | GATATTCGAAGTGCCTGAAA+CGG | + | chr4.2:82757226-82757245 | MS.gene92577:CDS | 40.0% |
| ! | TGCTTTTCTTGAACGGAACA+CGG | + | chr4.2:82756773-82756792 | MS.gene92577:CDS | 40.0% |
| ! | TTTTTCACAGGGTCAACGAT+TGG | + | chr4.2:82757349-82757368 | MS.gene92577:CDS | 40.0% |
| !! | ATGGTGTTTGCTGTTAACCA+AGG | + | chr4.2:82757473-82757492 | MS.gene92577:CDS | 40.0% |
| !! | GAATTTGTTACCGGATGGAA+GGG | + | chr4.2:82757076-82757095 | MS.gene92577:CDS | 40.0% |
| !! | GTGTCGGTGAGGATTTTTAA+GGG | - | chr4.2:82756225-82756244 | None:intergenic | 40.0% |
| !! | TGTGTCGGTGAGGATTTTTA+AGG | - | chr4.2:82756226-82756245 | None:intergenic | 40.0% |
| !!! | GACGGAGTTGGTTTTTTATG+GGG | - | chr4.2:82756203-82756222 | None:intergenic | 40.0% |
| !!! | GGACGGAGTTGGTTTTTTAT+GGG | - | chr4.2:82756204-82756223 | None:intergenic | 40.0% |
| !!! | GGTTTTTTGGGAGGAGTTTA+CGG | - | chr4.2:82756125-82756144 | None:intergenic | 40.0% |
| !!! | GTAACAATCCGGTTTGGTTT+TGG | - | chr4.2:82756160-82756179 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGAGGAGTTTAC+GGG | - | chr4.2:82756124-82756143 | None:intergenic | 40.0% |
| !!! | TGAACCGGCAATGGTTTTTT+GGG | - | chr4.2:82756137-82756156 | None:intergenic | 40.0% |
| AACGACGTCGAATTAAGCGA+AGG | + | chr4.2:82756375-82756394 | MS.gene92577:CDS | 45.0% | |
| ACAAACAACAACCACCGCAT+CGG | - | chr4.2:82756736-82756755 | None:intergenic | 45.0% | |
| ACCGTTTGGGAGAAATGAAC+CGG | - | chr4.2:82756259-82756278 | None:intergenic | 45.0% | |
| ATCATCATCATCGGTGGAAG+AGG | + | chr4.2:82756438-82756457 | MS.gene92577:CDS | 45.0% | |
| ATGAGCGTAACAATCCGGTT+TGG | - | chr4.2:82756166-82756185 | None:intergenic | 45.0% | |
| CGTGTTTGCGAACACGAAAT+CGG | + | chr4.2:82756593-82756612 | MS.gene92577:CDS | 45.0% | |
| CTCTTAGACCGAACCAACAT+CGG | + | chr4.2:82756093-82756112 | MS.gene92577:CDS | 45.0% | |
| GCCGTCGAATGATAAAGTCT+TGG | - | chr4.2:82757056-82757075 | None:intergenic | 45.0% | |
| GCTAGTAAAACCCTTCCATC+CGG | - | chr4.2:82757089-82757108 | None:intergenic | 45.0% | |
| GGTTCTATCATCATCATCGG+TGG | + | chr4.2:82756432-82756451 | MS.gene92577:CDS | 45.0% | |
| GTGCCTGAAACGGTATTGTA+TGG | + | chr4.2:82757236-82757255 | MS.gene92577:CDS | 45.0% | |
| TAACGAAAACCGTGTGGTTC+GGG | + | chr4.2:82756629-82756648 | MS.gene92577:CDS | 45.0% | |
| TATCCTCCATTTCCCAAACC+GGG | - | chr4.2:82756848-82756867 | None:intergenic | 45.0% | |
| TCAGGCACTTCGAATATCTC+AGG | - | chr4.2:82757224-82757243 | None:intergenic | 45.0% | |
| TCCGGTTCATTTCTCCCAAA+CGG | + | chr4.2:82756255-82756274 | MS.gene92577:CDS | 45.0% | |
| TCCTCCCAAAAAACCATTGC+CGG | + | chr4.2:82756130-82756149 | MS.gene92577:CDS | 45.0% | |
| TCGAATTAAGCGAAGGTCGT+TGG | + | chr4.2:82756382-82756401 | MS.gene92577:CDS | 45.0% | |
| TCGTGTTCGCAAACACGAAA+AGG | - | chr4.2:82756590-82756609 | None:intergenic | 45.0% | |
| TGAACGGAACACGGATATTC+CGG | + | chr4.2:82756782-82756801 | MS.gene92577:CDS | 45.0% | |
| TGCACCGCCAGGTTATTATA+TGG | + | chr4.2:82757454-82757473 | MS.gene92577:CDS | 45.0% | |
| TTCAACCCGTGTGATTCAAC+CGG | + | chr4.2:82756330-82756349 | MS.gene92577:CDS | 45.0% | |
| ! | AGCGTTTTCGCCTGAGTATT+TGG | + | chr4.2:82757175-82757194 | MS.gene92577:CDS | 45.0% |
| ! | GATGGAAGGGTTTTACTAGC+GGG | + | chr4.2:82757089-82757108 | MS.gene92577:CDS | 45.0% |
| ! | GGAGCTATGAAAGGTACACA+AGG | + | chr4.2:82756933-82756952 | MS.gene92577:CDS | 45.0% |
| ! | GGATGGAAGGGTTTTACTAG+CGG | + | chr4.2:82757088-82757107 | MS.gene92577:CDS | 45.0% |
| ! | GTCAACGATTGGTCAAGCTT+GGG | + | chr4.2:82757360-82757379 | MS.gene92577:CDS | 45.0% |
| ! | TCAACGATTGGTCAAGCTTG+GGG | + | chr4.2:82757361-82757380 | MS.gene92577:CDS | 45.0% |
| !! | ACGACACCGTTTTTGCGTTT+CGG | - | chr4.2:82756486-82756505 | None:intergenic | 45.0% |
| !! | CGAATTTGTTACCGGATGGA+AGG | + | chr4.2:82757075-82757094 | MS.gene92577:CDS | 45.0% |
| !! | CGGTGAGGATTTTTAAGGGA+CGG | - | chr4.2:82756221-82756240 | None:intergenic | 45.0% |
| !! | GGATTTTTAAGGGACGGAGT+TGG | - | chr4.2:82756215-82756234 | None:intergenic | 45.0% |
| !! | GGTTCACTTTTACAAACCGG+TGG | + | chr4.2:82756276-82756295 | MS.gene92577:CDS | 45.0% |
| !! | TTCGACGGCGAATTTGTTAC+CGG | + | chr4.2:82757067-82757086 | MS.gene92577:CDS | 45.0% |
| !!! | GGGACGGAGTTGGTTTTTTA+TGG | - | chr4.2:82756205-82756224 | None:intergenic | 45.0% |
| !!! | GGTTTTTTATGGGGTCGAAG+AGG | - | chr4.2:82756194-82756213 | None:intergenic | 45.0% |
| !!! | GTGAACCGGCAATGGTTTTT+TGG | - | chr4.2:82756138-82756157 | None:intergenic | 45.0% |
| AAACCCGTCTAAGTCACCAC+CGG | - | chr4.2:82756295-82756314 | None:intergenic | 50.0% | |
| AAACCGGTGGTGACTTAGAC+GGG | + | chr4.2:82756289-82756308 | MS.gene92577:CDS | 50.0% | |
| AAAGTCTTGGCACAGTGCCT+GGG | - | chr4.2:82757043-82757062 | None:intergenic | 50.0% | |
| AACACGGATATTCCGGCACA+TGG | + | chr4.2:82756789-82756808 | MS.gene92577:CDS | 50.0% | |
| AAGGTGGAGGATCCGATGTA+TGG | + | chr4.2:82757412-82757431 | MS.gene92577:CDS | 50.0% | |
| ACACGGATATTCCGGCACAT+GGG | + | chr4.2:82756790-82756809 | MS.gene92577:CDS | 50.0% | |
| ACCATGAACCGTAACCCAAC+CGG | - | chr4.2:82757014-82757033 | None:intergenic | 50.0% | |
| AGTGTGCCTTTGCCAGTTGT+GGG | + | chr4.2:82757281-82757300 | MS.gene92577:CDS | 50.0% | |
| ATGACCCGGTTGAATCACAC+GGG | - | chr4.2:82756338-82756357 | None:intergenic | 50.0% | |
| ATTCAACCGGGTCATGCGAT+TGG | + | chr4.2:82756343-82756362 | MS.gene92577:CDS | 50.0% | |
| CAAACCGGTGGTGACTTAGA+CGG | + | chr4.2:82756288-82756307 | MS.gene92577:CDS | 50.0% | |
| CATGACCCGGTTGAATCACA+CGG | - | chr4.2:82756339-82756358 | None:intergenic | 50.0% | |
| CCGGTTCACCAAAACCAAAC+CGG | + | chr4.2:82756149-82756168 | MS.gene92577:CDS | 50.0% | |
| GAGCTTCTAGTCCAAAACGC+AGG | + | chr4.2:82756024-82756043 | MS.gene92577:CDS | 50.0% | |
| GTTTGTGGCGGTGCTCAATA+CGG | + | chr4.2:82756750-82756769 | MS.gene92577:CDS | 50.0% | |
| TAAAGTCTTGGCACAGTGCC+TGG | - | chr4.2:82757044-82757063 | None:intergenic | 50.0% | |
| TAACCAAGGTGTGCCAAGTG+TGG | + | chr4.2:82757487-82757506 | MS.gene92577:CDS | 50.0% | |
| TCAACCCGTGTGATTCAACC+GGG | + | chr4.2:82756331-82756350 | MS.gene92577:CDS | 50.0% | |
| TCGGGTTTACCCGGAGTTAA+CGG | + | chr4.2:82756647-82756666 | MS.gene92577:CDS | 50.0% | |
| TGGACCGAGGAATTATCCGT+CGG | + | chr4.2:82756671-82756690 | MS.gene92577:CDS | 50.0% | |
| TGTATCCAACGTGCCACACT+TGG | - | chr4.2:82757503-82757522 | None:intergenic | 50.0% | |
| TTCAACCGGGTCATGCGATT+GGG | + | chr4.2:82756344-82756363 | MS.gene92577:CDS | 50.0% | |
| TTGTGGGCGGATATTAGCGA+CGG | + | chr4.2:82756815-82756834 | MS.gene92577:CDS | 50.0% | |
| TTTGGGAGGAGTTTACGGGT+TGG | - | chr4.2:82756120-82756139 | None:intergenic | 50.0% | |
| ! | AGGTGAATTTTCCGATGCGG+TGG | + | chr4.2:82756722-82756741 | MS.gene92577:CDS | 50.0% |
| ! | GGTCAACGATTGGTCAAGCT+TGG | + | chr4.2:82757359-82757378 | MS.gene92577:CDS | 50.0% |
| ! | TTGAGGCTATGCCTGCGTTT+TGG | - | chr4.2:82756038-82756057 | None:intergenic | 50.0% |
| !! | ACGGCGAATTTGTTACCGGA+TGG | + | chr4.2:82757071-82757090 | MS.gene92577:CDS | 50.0% |
| !! | CGACACCGTTTTTGCGTTTC+GGG | - | chr4.2:82756485-82756504 | None:intergenic | 50.0% |
| !! | CGATGTTGGTTCGGTCTAAG+AGG | - | chr4.2:82756095-82756114 | None:intergenic | 50.0% |
| !! | GATGCGGTGGTTGTTGTTTG+TGG | + | chr4.2:82756735-82756754 | MS.gene92577:CDS | 50.0% |
| !! | TCGGTGATGCTGGCTTTAGA+AGG | + | chr4.2:82756702-82756721 | MS.gene92577:CDS | 50.0% |
| !! | TTTACGGGTTGGACCGATGT+TGG | - | chr4.2:82756109-82756128 | None:intergenic | 50.0% |
| !!! | ACCGGCAATGGTTTTTTGGG+AGG | - | chr4.2:82756134-82756153 | None:intergenic | 50.0% |
| !!! | AGAGTGGCACGTGCTGATTT+TGG | - | chr4.2:82755991-82756010 | None:intergenic | 50.0% |
| !!! | CCGGTTTGGTTTTGGTGAAC+CGG | - | chr4.2:82756152-82756171 | None:intergenic | 50.0% |
| !!! | CGGTTCATGGTTTTGAACCC+AGG | + | chr4.2:82757023-82757042 | MS.gene92577:CDS | 50.0% |
| !!! | GAGTGGCACGTGCTGATTTT+GGG | - | chr4.2:82755990-82756009 | None:intergenic | 50.0% |
| !!! | TGGTTTTGGTGAACCGGCAA+TGG | - | chr4.2:82756146-82756165 | None:intergenic | 50.0% |
| ACCGAGGAATTATCCGTCGG+CGG | + | chr4.2:82756674-82756693 | MS.gene92577:CDS | 55.0% | |
| ACCGGTTGGGTTACGGTTCA+TGG | + | chr4.2:82757010-82757029 | MS.gene92577:CDS | 55.0% | |
| ATCGACCTGGTGAACCGGTT+GGG | + | chr4.2:82756997-82757016 | MS.gene92577:CDS | 55.0% | |
| ATTCCGGCACATGGGAGTTG+TGG | + | chr4.2:82756798-82756817 | MS.gene92577:CDS | 55.0% | |
| CGGGTTTACCCGGAGTTAAC+GGG | + | chr4.2:82756648-82756667 | MS.gene92577:CDS | 55.0% | |
| CTCCATTTCCCAAACCGGGT+CGG | - | chr4.2:82756844-82756863 | None:intergenic | 55.0% | |
| CTCTTCCCAATCGCATGACC+CGG | - | chr4.2:82756352-82756371 | None:intergenic | 55.0% | |
| CTGGTGAACCGGTTGGGTTA+CGG | + | chr4.2:82757003-82757022 | MS.gene92577:CDS | 55.0% | |
| GAGTGTGCCTTTGCCAGTTG+TGG | + | chr4.2:82757280-82757299 | MS.gene92577:CDS | 55.0% | |
| GTTTACCCGGAGTTAACGGG+TGG | + | chr4.2:82756651-82756670 | MS.gene92577:CDS | 55.0% | |
| TATCGACCTGGTGAACCGGT+TGG | + | chr4.2:82756996-82757015 | MS.gene92577:CDS | 55.0% | |
| TGTGGGCGGATATTAGCGAC+GGG | + | chr4.2:82756816-82756835 | MS.gene92577:CDS | 55.0% | |
| TTATCCGTCGGCGGGTAGTT+CGG | + | chr4.2:82756683-82756702 | MS.gene92577:CDS | 55.0% | |
| TTCCGGCACATGGGAGTTGT+GGG | + | chr4.2:82756799-82756818 | MS.gene92577:CDS | 55.0% | |
| ! | CGATTGGTCAAGCTTGGGGT+TGG | + | chr4.2:82757365-82757384 | MS.gene92577:CDS | 55.0% |
| ! | GGGTTGGACCGATGTTGGTT+CGG | - | chr4.2:82756104-82756123 | None:intergenic | 55.0% |
| ! | TCGATGGTGTTGGAAGGTGG+AGG | + | chr4.2:82757399-82757418 | MS.gene92577:CDS | 55.0% |
| ! | TGGTCGATGGTGTTGGAAGG+TGG | + | chr4.2:82757396-82757415 | MS.gene92577:CDS | 55.0% |
| !! | ATCCGACCCGGTTTGGGAAA+TGG | + | chr4.2:82756839-82756858 | MS.gene92577:CDS | 55.0% |
| !! | GCGGTGGTTGTTGTTTGTGG+CGG | + | chr4.2:82756738-82756757 | MS.gene92577:CDS | 55.0% |
| ACCGACACATGGTGCTCGTC+CGG | + | chr4.2:82756237-82756256 | MS.gene92577:CDS | 60.0% | |
| ACCGGACGAGCACCATGTGT+CGG | - | chr4.2:82756241-82756260 | None:intergenic | 60.0% | |
| ACTAGAAGCTCCCACGTGCC+GGG | - | chr4.2:82756015-82756034 | None:intergenic | 60.0% | |
| ATCACCGAACTACCCGCCGA+CGG | - | chr4.2:82756690-82756709 | None:intergenic | 60.0% | |
| ATTAGCGACGGGATCCGACC+CGG | + | chr4.2:82756827-82756846 | MS.gene92577:CDS | 60.0% | |
| CCCGCCGACGGATAATTCCT+CGG | - | chr4.2:82756678-82756697 | None:intergenic | 60.0% | |
| CCGAGGAATTATCCGTCGGC+GGG | + | chr4.2:82756675-82756694 | MS.gene92577:CDS | 60.0% | |
| CCGGGTAAACCCGAACCACA+CGG | - | chr4.2:82756641-82756660 | None:intergenic | 60.0% | |
| CTCGGTCCACCCGTTAACTC+CGG | - | chr4.2:82756660-82756679 | None:intergenic | 60.0% | |
| GACTAGAAGCTCCCACGTGC+CGG | - | chr4.2:82756016-82756035 | None:intergenic | 60.0% | |
| GATGTATGGCCCCACCGAGT+GGG | + | chr4.2:82757426-82757445 | MS.gene92577:CDS | 60.0% | |
| GTGCAACCATCCCACTCGGT+GGG | - | chr4.2:82757439-82757458 | None:intergenic | 60.0% | |
| GTGCCACACTTGGCACACCT+TGG | - | chr4.2:82757493-82757512 | None:intergenic | 60.0% | |
| GTGTGCCAAGTGTGGCACGT+TGG | + | chr4.2:82757495-82757514 | MS.gene92577:CDS | 60.0% | |
| TCGGTCCACCCGTTAACTCC+GGG | - | chr4.2:82756659-82756678 | None:intergenic | 60.0% | |
| TCTGCGGTGGTCGATGGTGT+TGG | + | chr4.2:82757389-82757408 | MS.gene92577:CDS | 60.0% | |
| ! | ACGAGCACCATGTGTCGGTG+AGG | - | chr4.2:82756236-82756255 | None:intergenic | 60.0% |
| ! | CACTCGGTGGGGCCATACAT+CGG | - | chr4.2:82757427-82757446 | None:intergenic | 60.0% |
| ! | CCGTGTGGTTCGGGTTTACC+CGG | + | chr4.2:82756638-82756657 | MS.gene92577:CDS | 60.0% |
| ! | CGGTGGTCGATGGTGTTGGA+AGG | + | chr4.2:82757393-82757412 | MS.gene92577:CDS | 60.0% |
| ! | CGTAACCCAACCGGTTCACC+AGG | - | chr4.2:82757005-82757024 | None:intergenic | 60.0% |
| ! | TGCAACCATCCCACTCGGTG+GGG | - | chr4.2:82757438-82757457 | None:intergenic | 60.0% |
| !! | CAAGCTTGGGGTTGGCTCTG+CGG | + | chr4.2:82757373-82757392 | MS.gene92577:CDS | 60.0% |
| !! | CGACCCGGTTTGGGAAATGG+AGG | + | chr4.2:82756842-82756861 | MS.gene92577:CDS | 60.0% |
| AGTGGGATGGTTGCACCGCC+AGG | + | chr4.2:82757443-82757462 | MS.gene92577:CDS | 65.0% | |
| CGATGTATGGCCCCACCGAG+TGG | + | chr4.2:82757425-82757444 | MS.gene92577:CDS | 65.0% | |
| CGCCCACAACTCCCATGTGC+CGG | - | chr4.2:82756804-82756823 | None:intergenic | 65.0% | |
| CGGCACATGGGAGTTGTGGG+CGG | + | chr4.2:82756802-82756821 | MS.gene92577:CDS | 65.0% | |
| CTAGAAGCTCCCACGTGCCG+GGG | - | chr4.2:82756014-82756033 | None:intergenic | 65.0% | |
| GACGGGATCCGACCCGGTTT+GGG | + | chr4.2:82756833-82756852 | MS.gene92577:CDS | 65.0% | |
| GGCGGTGCAACCATCCCACT+CGG | - | chr4.2:82757443-82757462 | None:intergenic | 65.0% | |
| GGTGCAACCATCCCACTCGG+TGG | - | chr4.2:82757440-82757459 | None:intergenic | 65.0% | |
| TATGGCCCCACCGAGTGGGA+TGG | + | chr4.2:82757430-82757449 | MS.gene92577:CDS | 65.0% | |
| ! | CGGAGTTAACGGGTGGACCG+AGG | + | chr4.2:82756658-82756677 | MS.gene92577:CDS | 65.0% |
| ! | GGCGGGTAGTTCGGTGATGC+TGG | + | chr4.2:82756692-82756711 | MS.gene92577:CDS | 65.0% |
| ! | TCAGCACGTGCCACTCTCCC+CGG | + | chr4.2:82755994-82756013 | MS.gene92577:CDS | 65.0% |
| !! | GTTGGCTCTGCGGTGGTCGA+TGG | + | chr4.2:82757383-82757402 | MS.gene92577:CDS | 65.0% |
| CGACGGGATCCGACCCGGTT+TGG | + | chr4.2:82756832-82756851 | MS.gene92577:CDS | 70.0% | |
| TGCCACTCTCCCCGGCACGT+GGG | + | chr4.2:82756002-82756021 | MS.gene92577:CDS | 70.0% | |
| !! | GCTTGGGGTTGGCTCTGCGG+TGG | + | chr4.2:82757376-82757395 | MS.gene92577:CDS | 70.0% |
| CTCCCACGTGCCGGGGAGAG+TGG | - | chr4.2:82756007-82756026 | None:intergenic | 75.0% | |
| ! | GTGCCACTCTCCCCGGCACG+TGG | + | chr4.2:82756001-82756020 | MS.gene92577:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 82755934 | 82757532 | 82755934 | ID=MS.gene92577 |
| chr4.2 | mRNA | 82755934 | 82757532 | 82755934 | ID=MS.gene92577.t1;Parent=MS.gene92577 |
| chr4.2 | exon | 82755934 | 82757532 | 82755934 | ID=MS.gene92577.t1.exon1;Parent=MS.gene92577.t1 |
| chr4.2 | CDS | 82755934 | 82757532 | 82755934 | ID=cds.MS.gene92577.t1;Parent=MS.gene92577.t1 |
| Gene Sequence |
| Protein sequence |
