Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93375.t1 | CAA65771.1 | 99.6 | 250 | 1 | 0 | 1 | 250 | 1 | 250 | 2.60E-134 | 488 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93375.t1 | O65100 | 78.0 | 255 | 51 | 1 | 1 | 250 | 1 | 255 | 2.6e-103 | 376.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93375.t1 | Q9ZP90 | 99.6 | 250 | 1 | 0 | 1 | 250 | 1 | 250 | 1.8e-134 | 488.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052792 | MS.gene93375 | 0.886639 | 2.87E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93375 | MS.gene07505 | PPI |
| MS.gene93375 | MS.gene071223 | PPI |
| MS.gene93375 | MS.gene29686 | PPI |
| MS.gene93375 | MS.gene94217 | PPI |
| MS.gene93375 | MS.gene76087 | PPI |
| MS.gene93375 | MS.gene004968 | PPI |
| MS.gene93375 | MS.gene86821 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93375.t1 | MTR_4g014540 | 99.200 | 250 | 2 | 0 | 1 | 250 | 1 | 250 | 0.0 | 506 |
| MS.gene93375.t1 | MTR_7g069980 | 76.680 | 253 | 54 | 2 | 1 | 250 | 1 | 251 | 2.73e-133 | 376 |
| MS.gene93375.t1 | MTR_5g083170 | 71.889 | 217 | 60 | 1 | 35 | 250 | 28 | 244 | 3.58e-107 | 310 |
| MS.gene93375.t1 | MTR_5g083170 | 70.732 | 164 | 47 | 1 | 35 | 197 | 28 | 191 | 6.00e-75 | 226 |
| MS.gene93375.t1 | MTR_5g072560 | 75.806 | 124 | 30 | 0 | 126 | 249 | 18 | 141 | 1.97e-63 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93375.t1 | AT5G01600 | 68.293 | 246 | 66 | 2 | 11 | 250 | 16 | 255 | 1.72e-116 | 333 |
| MS.gene93375.t1 | AT2G40300 | 70.982 | 224 | 63 | 1 | 28 | 249 | 34 | 257 | 1.50e-111 | 321 |
| MS.gene93375.t1 | AT3G56090 | 78.351 | 194 | 42 | 0 | 56 | 249 | 62 | 255 | 4.68e-107 | 310 |
| MS.gene93375.t1 | AT3G11050 | 70.673 | 208 | 61 | 0 | 43 | 250 | 43 | 250 | 7.01e-103 | 299 |
| MS.gene93375.t1 | AT3G61010 | 70.000 | 50 | 15 | 0 | 97 | 146 | 369 | 418 | 1.01e-15 | 76.3 |
| MS.gene93375.t1 | AT3G61010 | 70.000 | 50 | 15 | 0 | 97 | 146 | 369 | 418 | 1.01e-15 | 76.3 |
Find 43 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGCTCATAATGTTTCTT+TGG | 0.198410 | 4.1:-81586644 | MS.gene93375:CDS |
| TGTGGAGAACAGGTTCTTTA+AGG | 0.220356 | 4.1:-81586109 | MS.gene93375:intron |
| CATGGAATTGGCTCTGTCTT+TGG | 0.276046 | 4.1:-81585296 | MS.gene93375:CDS |
| AATGCACCAACGGCATTAAC+AGG | 0.368688 | 4.1:-81586718 | MS.gene93375:CDS |
| GTTTGATTCAGCCATGGAAT+TGG | 0.370462 | 4.1:-81585308 | MS.gene93375:intron |
| AGAATTTGATCATGCTGAAA+AGG | 0.375272 | 4.1:-81585616 | MS.gene93375:CDS |
| AAAGAAACATTATGAGCAAT+AGG | 0.377860 | 4.1:+81586646 | None:intergenic |
| TGAAAAGCTCATGAAATATC+AGG | 0.391882 | 4.1:-81586058 | MS.gene93375:intron |
| TCTGAGGGAGGGCTCACAAT+AGG | 0.396058 | 4.1:+81585636 | None:intergenic |
| TTCTTCTTTGAATCTTCCTA+TGG | 0.409275 | 4.1:-81586785 | MS.gene93375:CDS |
| CTGAGGGAGGGCTCACAATA+GGG | 0.446437 | 4.1:+81585637 | None:intergenic |
| TCTTTGAATCTTCCTATGGA+TGG | 0.467506 | 4.1:-81586781 | MS.gene93375:CDS |
| GTGACTCAACTGAGATTAGT+TGG | 0.480672 | 4.1:-81584521 | MS.gene93375:CDS |
| TGATTTGCTTAGAATATTCG+TGG | 0.482145 | 4.1:-81585678 | MS.gene93375:intron |
| CAGAGACAACGTTGCTCTCA+AGG | 0.486549 | 4.1:-81586225 | MS.gene93375:CDS |
| TTCCTATGGATGGTGATAAG+AGG | 0.508563 | 4.1:-81586771 | MS.gene93375:CDS |
| TCGATGAAATCTGCCAATTG+AGG | 0.510833 | 4.1:+81585080 | None:intergenic |
| AGGTGAAAAGATCGAAACTT+TGG | 0.511973 | 4.1:+81586846 | None:intergenic |
| TCTTTCTTGACTTCTTCAAA+CGG | 0.514880 | 4.1:+81586682 | None:intergenic |
| TCGTAACAATGATCCTCAAT+TGG | 0.517803 | 4.1:-81585093 | MS.gene93375:CDS |
| GAATTTGATCATGCTGAAAA+GGG | 0.518739 | 4.1:-81585615 | MS.gene93375:CDS |
| CAACTGAGATTAGTTGGAAA+GGG | 0.526186 | 4.1:-81584515 | MS.gene93375:CDS |
| TTCAGCATGATCAAATTCTG+AGG | 0.562649 | 4.1:+81585620 | None:intergenic |
| TCAACTGAGATTAGTTGGAA+AGG | 0.563711 | 4.1:-81584516 | MS.gene93375:CDS |
| TTTGAGAAATGACCCACGAT+AGG | 0.571890 | 4.1:+81586820 | None:intergenic |
| TCAGCATGATCAAATTCTGA+GGG | 0.576489 | 4.1:+81585621 | None:intergenic |
| CAAAGACAGAGCCAATTCCA+TGG | 0.587636 | 4.1:+81585297 | None:intergenic |
| ATAACACCTGTTAATGCCGT+TGG | 0.588080 | 4.1:+81586712 | None:intergenic |
| TGCTGCTGCAAATGCACCAA+CGG | 0.590613 | 4.1:-81586728 | MS.gene93375:CDS |
| AGAGACAACGTTGCTCTCAA+GGG | 0.594095 | 4.1:-81586224 | MS.gene93375:CDS |
| GAAAAGGGAGATGCATTGTA+TGG | 0.595467 | 4.1:-81585600 | MS.gene93375:intron |
| TTCCTCTTATCACCATCCAT+AGG | 0.596094 | 4.1:+81586769 | None:intergenic |
| CAAAGTATGCAAACAAGGAG+TGG | 0.600070 | 4.1:+81586249 | None:intergenic |
| TCTGTCAAAGTATGCAAACA+AGG | 0.605468 | 4.1:+81586244 | None:intergenic |
| AAATGACCCACGATAGGTGA+AGG | 0.609219 | 4.1:+81586826 | None:intergenic |
| AGATTAGTTGGAAAGGGTCA+CGG | 0.615348 | 4.1:-81584509 | MS.gene93375:intron |
| GAATATTCGTGGTGGAAGAG+TGG | 0.615684 | 4.1:-81585667 | MS.gene93375:CDS |
| GTTCTTTAAGGAATCTAGTG+AGG | 0.615734 | 4.1:-81586097 | MS.gene93375:CDS |
| CATGATCAAATTCTGAGGGA+GGG | 0.620152 | 4.1:+81585625 | None:intergenic |
| GCATGATCAAATTCTGAGGG+AGG | 0.620192 | 4.1:+81585624 | None:intergenic |
| AAACAAGGAGTGGTACACAT+AGG | 0.671283 | 4.1:+81586259 | None:intergenic |
| TGATAAGAGGAAGAACGTGA+AGG | 0.682141 | 4.1:-81586758 | MS.gene93375:CDS |
| TTTGCTTAGAATATTCGTGG+TGG | 0.687765 | 4.1:-81585675 | MS.gene93375:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAACAAGAAGAAAAAAT+TGG | + | chr4.1:81586642-81586661 | None:intergenic | 15.0% |
| !! | TGATATAAAATATATGAATG+AGG | - | chr4.1:81586795-81586814 | MS.gene93375:CDS | 15.0% |
| !! | TTATGTTTCATGAATATAAT+AGG | - | chr4.1:81586110-81586129 | MS.gene93375:intron | 15.0% |
| !!! | TAATGATAGTTTTAAGTATA+TGG | - | chr4.1:81585724-81585743 | MS.gene93375:intron | 15.0% |
| !!! | TTAACATATAATGATTTTAG+AGG | + | chr4.1:81585477-81585496 | None:intergenic | 15.0% |
| !! | ACTTTATGAATAAATAGCAA+TGG | + | chr4.1:81584696-81584715 | None:intergenic | 20.0% |
| !! | ATGAAAAACAAAAACCAATT+GGG | - | chr4.1:81586303-81586322 | MS.gene93375:intron | 20.0% |
| !! | ATGTTTAGGTATAAATATCA+TGG | + | chr4.1:81586285-81586304 | None:intergenic | 20.0% |
| !! | ATTACTATATCCATAATAAG+AGG | + | chr4.1:81585517-81585536 | None:intergenic | 20.0% |
| !! | TAATCTAAAAACATCTTCAA+TGG | + | chr4.1:81586518-81586537 | None:intergenic | 20.0% |
| !! | TATTCATGAAACATAATTCT+TGG | + | chr4.1:81586106-81586125 | None:intergenic | 20.0% |
| !! | TTAAATATAATCACATGTGT+CGG | - | chr4.1:81585760-81585779 | MS.gene93375:intron | 20.0% |
| !! | TTTATATTGTCCTCTTATTA+TGG | - | chr4.1:81585504-81585523 | MS.gene93375:intron | 20.0% |
| !!! | AATTTTCAGCTAATTATGTT+AGG | - | chr4.1:81584808-81584827 | MS.gene93375:intron | 20.0% |
| !!! | ATTGTTAAGTAGTAACTTTT+TGG | - | chr4.1:81585284-81585303 | MS.gene93375:CDS | 20.0% |
| !!! | GTATAATAGCTTGAAATTTT+AGG | - | chr4.1:81585348-81585367 | MS.gene93375:intron | 20.0% |
| !!! | TTGTAGCTTATTTCTTAATA+TGG | - | chr4.1:81585076-81585095 | MS.gene93375:CDS | 20.0% |
| ! | AAAGAAACATTATGAGCAAT+AGG | + | chr4.1:81584590-81584609 | None:intergenic | 25.0% |
| ! | AAGATTCAAAGAAGAAAAAG+TGG | + | chr4.1:81584444-81584463 | None:intergenic | 25.0% |
| ! | ACTTAAAAAGTGAATCATGT+TGG | - | chr4.1:81585208-81585227 | MS.gene93375:intron | 25.0% |
| ! | ATAGACATATTGAGATCAAA+TGG | - | chr4.1:81586071-81586090 | MS.gene93375:CDS | 25.0% |
| ! | CATGAAAAACAAAAACCAAT+TGG | - | chr4.1:81586302-81586321 | MS.gene93375:intron | 25.0% |
| ! | TATTACCAAAGTAATGTAAG+TGG | + | chr4.1:81586764-81586783 | None:intergenic | 25.0% |
| ! | TATTGCTCATAATGTTTCTT+TGG | - | chr4.1:81584589-81584608 | MS.gene93375:intron | 25.0% |
| ! | TGAAAAACAAAAACCAATTG+GGG | - | chr4.1:81586304-81586323 | MS.gene93375:intron | 25.0% |
| ! | TGATCTCAATATGTCTATAT+AGG | + | chr4.1:81586069-81586088 | None:intergenic | 25.0% |
| ! | TGTTTCATGAATATAATAGG+TGG | - | chr4.1:81586113-81586132 | MS.gene93375:intron | 25.0% |
| ! | TTATCTTGATGTTATTGTTG+TGG | - | chr4.1:81585390-81585409 | MS.gene93375:intron | 25.0% |
| !! | TAATAGCTTGAAATTTTAGG+AGG | - | chr4.1:81585351-81585370 | MS.gene93375:intron | 25.0% |
| !! | TTTTTGTGAATTTTTGTGTG+TGG | - | chr4.1:81585106-81585125 | MS.gene93375:intron | 25.0% |
| !!! | CTTTTTTATGACTGTCATTA+AGG | - | chr4.1:81586353-81586372 | MS.gene93375:intron | 25.0% |
| !!! | CTTTTTTATTTCCCTTCTTT+TGG | - | chr4.1:81585903-81585922 | MS.gene93375:intron | 25.0% |
| !!! | GGTTTTTGTTTTTCATGTTT+AGG | + | chr4.1:81586299-81586318 | None:intergenic | 25.0% |
| !!! | TAAGGTTTTTGAAATCTCTA+TGG | - | chr4.1:81586371-81586390 | MS.gene93375:intron | 25.0% |
| AAACATCTTCAATGGAATCA+AGG | + | chr4.1:81586510-81586529 | None:intergenic | 30.0% | |
| AAGTAACAACCTATGATAAC+AGG | + | chr4.1:81584835-81584854 | None:intergenic | 30.0% | |
| AGAATTTGATCATGCTGAAA+AGG | - | chr4.1:81585617-81585636 | MS.gene93375:CDS | 30.0% | |
| AGTAACAACCTATGATAACA+GGG | + | chr4.1:81584834-81584853 | None:intergenic | 30.0% | |
| ATAATGATGTAAATGCAGTG+TGG | - | chr4.1:81584939-81584958 | MS.gene93375:intron | 30.0% | |
| ATTCAAAAACAGAGAGAAAG+AGG | + | chr4.1:81586007-81586026 | None:intergenic | 30.0% | |
| CGAATATTCTAAGCAAATCA+AGG | + | chr4.1:81585555-81585574 | None:intergenic | 30.0% | |
| GAATTTGATCATGCTGAAAA+GGG | - | chr4.1:81585618-81585637 | MS.gene93375:CDS | 30.0% | |
| GAGTCAGCATAAATAGTTAA+AGG | + | chr4.1:81585880-81585899 | None:intergenic | 30.0% | |
| GTTTCAACTTGACAACTTAA+AGG | + | chr4.1:81586211-81586230 | None:intergenic | 30.0% | |
| TACAAGAAGAAGCTTATAGA+GGG | + | chr4.1:81585061-81585080 | None:intergenic | 30.0% | |
| TCTTTCTTGACTTCTTCAAA+CGG | + | chr4.1:81584554-81584573 | None:intergenic | 30.0% | |
| TGAAAAGCTCATGAAATATC+AGG | - | chr4.1:81585175-81585194 | MS.gene93375:intron | 30.0% | |
| TTATACTAAAGAGTCATGCT+TGG | + | chr4.1:81585334-81585353 | None:intergenic | 30.0% | |
| TTCTTCTTTGAATCTTCCTA+TGG | - | chr4.1:81584448-81584467 | MS.gene93375:intron | 30.0% | |
| ! | CAATTCTAAGCTTGGTAATT+GGG | + | chr4.1:81586466-81586485 | None:intergenic | 30.0% |
| ! | TATATGTATTTTCCTTGCAC+AGG | - | chr4.1:81586660-81586679 | MS.gene93375:CDS | 30.0% |
| !! | GATTTTAGAGGTCTTTGTAA+CGG | + | chr4.1:81585465-81585484 | None:intergenic | 30.0% |
| !! | GTAGTAACTTTTTGGTATAG+CGG | - | chr4.1:81585292-81585311 | MS.gene93375:CDS | 30.0% |
| !! | TGATTTGCTTAGAATATTCG+TGG | - | chr4.1:81585555-81585574 | MS.gene93375:intron | 30.0% |
| !!! | CATTTGTTTTTGTTGCTTGT+AGG | - | chr4.1:81586828-81586847 | MS.gene93375:CDS | 30.0% |
| AAGCTCATGAAATATCAGGT+TGG | - | chr4.1:81585179-81585198 | MS.gene93375:intron | 35.0% | |
| AGAAAACACCATGTTACTCT+TGG | + | chr4.1:81586576-81586595 | None:intergenic | 35.0% | |
| AGGTGAAAAGATCGAAACTT+TGG | + | chr4.1:81584390-81584409 | None:intergenic | 35.0% | |
| CTACAAGAAGAAGCTTATAG+AGG | + | chr4.1:81585062-81585081 | None:intergenic | 35.0% | |
| GCTGAATCAAACCAAAAGAA+GGG | + | chr4.1:81585917-81585936 | None:intergenic | 35.0% | |
| TACCAAAGTAATGTAAGTGG+AGG | + | chr4.1:81586761-81586780 | None:intergenic | 35.0% | |
| TCAGCATGATCAAATTCTGA+GGG | + | chr4.1:81585615-81585634 | None:intergenic | 35.0% | |
| TCGTAACAATGATCCTCAAT+TGG | - | chr4.1:81586140-81586159 | MS.gene93375:intron | 35.0% | |
| TCTCATTGCAATTCTAAGCT+TGG | + | chr4.1:81586474-81586493 | None:intergenic | 35.0% | |
| TCTGTCAAAGTATGCAAACA+AGG | + | chr4.1:81584992-81585011 | None:intergenic | 35.0% | |
| TCTTTGAATCTTCCTATGGA+TGG | - | chr4.1:81584452-81584471 | MS.gene93375:intron | 35.0% | |
| TGGTATAGCGGTAAATAACA+TGG | - | chr4.1:81585304-81585323 | MS.gene93375:intron | 35.0% | |
| TTCAGCATGATCAAATTCTG+AGG | + | chr4.1:81585616-81585635 | None:intergenic | 35.0% | |
| TTCCTCCACTTACATTACTT+TGG | - | chr4.1:81586756-81586775 | MS.gene93375:CDS | 35.0% | |
| TTTGCTTAGAATATTCGTGG+TGG | - | chr4.1:81585558-81585577 | MS.gene93375:intron | 35.0% | |
| ! | AAGCTTGGTAATTGGGTAAT+TGG | + | chr4.1:81586459-81586478 | None:intergenic | 35.0% |
| ! | AATTTTTGTGTGTGGAGAAC+AGG | - | chr4.1:81585114-81585133 | MS.gene93375:intron | 35.0% |
| ! | CAACTGAGATTAGTTGGAAA+GGG | - | chr4.1:81586718-81586737 | MS.gene93375:CDS | 35.0% |
| ! | GCAATTCTAAGCTTGGTAAT+TGG | + | chr4.1:81586467-81586486 | None:intergenic | 35.0% |
| ! | GTTCTTTAAGGAATCTAGTG+AGG | - | chr4.1:81585136-81585155 | MS.gene93375:intron | 35.0% |
| ! | TAATTGATTCAACCTGTGCA+AGG | + | chr4.1:81586675-81586694 | None:intergenic | 35.0% |
| ! | TCAACTGAGATTAGTTGGAA+AGG | - | chr4.1:81586717-81586736 | MS.gene93375:CDS | 35.0% |
| !! | GGTTTTGTATCATCCTTACT+TGG | + | chr4.1:81585040-81585059 | None:intergenic | 35.0% |
| !!! | GGAATCAAGGTTTTAAACAG+TGG | + | chr4.1:81586497-81586516 | None:intergenic | 35.0% |
| AAACAAGGAGTGGTACACAT+AGG | + | chr4.1:81584977-81584996 | None:intergenic | 40.0% | |
| ACATACATGTGTCAGTGTCT+AGG | + | chr4.1:81585695-81585714 | None:intergenic | 40.0% | |
| ATAACACCTGTTAATGCCGT+TGG | + | chr4.1:81584524-81584543 | None:intergenic | 40.0% | |
| ATGTTAGGCCCTGTTATCAT+AGG | - | chr4.1:81584823-81584842 | MS.gene93375:intron | 40.0% | |
| CAAAAATTGCAGTCCCCAAT+TGG | + | chr4.1:81586320-81586339 | None:intergenic | 40.0% | |
| CAAAGTATGCAAACAAGGAG+TGG | + | chr4.1:81584987-81585006 | None:intergenic | 40.0% | |
| CTGCAGATCGAAAACATGTT+TGG | + | chr4.1:81585811-81585830 | None:intergenic | 40.0% | |
| GAAAAGGGAGATGCATTGTA+TGG | - | chr4.1:81585633-81585652 | MS.gene93375:CDS | 40.0% | |
| GGCTGAATCAAACCAAAAGA+AGG | + | chr4.1:81585918-81585937 | None:intergenic | 40.0% | |
| GTGACTCAACTGAGATTAGT+TGG | - | chr4.1:81586712-81586731 | MS.gene93375:CDS | 40.0% | |
| GTTTGATTCAGCCATGGAAT+TGG | - | chr4.1:81585925-81585944 | MS.gene93375:intron | 40.0% | |
| TCGATGAAATCTGCCAATTG+AGG | + | chr4.1:81586156-81586175 | None:intergenic | 40.0% | |
| TGATAAGAGGAAGAACGTGA+AGG | - | chr4.1:81584475-81584494 | MS.gene93375:intron | 40.0% | |
| TGTGGAGAACAGGTTCTTTA+AGG | - | chr4.1:81585124-81585143 | MS.gene93375:intron | 40.0% | |
| TTCCTATGGATGGTGATAAG+AGG | - | chr4.1:81584462-81584481 | MS.gene93375:intron | 40.0% | |
| TTCCTCTTATCACCATCCAT+AGG | + | chr4.1:81584467-81584486 | None:intergenic | 40.0% | |
| TTTGAGAAATGACCCACGAT+AGG | + | chr4.1:81584416-81584435 | None:intergenic | 40.0% | |
| ! | AGATTAGTTGGAAAGGGTCA+CGG | - | chr4.1:81586724-81586743 | MS.gene93375:CDS | 40.0% |
| ! | CATGATCAAATTCTGAGGGA+GGG | + | chr4.1:81585611-81585630 | None:intergenic | 40.0% |
| ! | CTTTAGCTCCAAGAGTAACA+TGG | - | chr4.1:81586565-81586584 | MS.gene93375:intron | 40.0% |
| ! | TTTCATCGAGAGCGAGTTTT+TGG | - | chr4.1:81586167-81586186 | MS.gene93375:intron | 40.0% |
| ! | TTTTCACCTTCACCTATCGT+GGG | - | chr4.1:81584401-81584420 | MS.gene93375:intron | 40.0% |
| !! | TTTTGTTGCTTGTAGGTGTG+TGG | - | chr4.1:81586835-81586854 | MS.gene93375:CDS | 40.0% |
| !!! | CTTTTGGTTTGATTCAGCCA+TGG | - | chr4.1:81585919-81585938 | MS.gene93375:intron | 40.0% |
| AAATGACCCACGATAGGTGA+AGG | + | chr4.1:81584410-81584429 | None:intergenic | 45.0% | |
| AATGCACCAACGGCATTAAC+AGG | - | chr4.1:81584515-81584534 | MS.gene93375:CDS | 45.0% | |
| AGAGACAACGTTGCTCTCAA+GGG | - | chr4.1:81585009-81585028 | MS.gene93375:intron | 45.0% | |
| CAAAGACAGAGCCAATTCCA+TGG | + | chr4.1:81585939-81585958 | None:intergenic | 45.0% | |
| ! | CTTTTCACCTTCACCTATCG+TGG | - | chr4.1:81584400-81584419 | MS.gene93375:intron | 45.0% |
| ! | GAATATTCGTGGTGGAAGAG+TGG | - | chr4.1:81585566-81585585 | MS.gene93375:intron | 45.0% |
| ! | GCATGATCAAATTCTGAGGG+AGG | + | chr4.1:81585612-81585631 | None:intergenic | 45.0% |
| !! | CATGGAATTGGCTCTGTCTT+TGG | - | chr4.1:81585937-81585956 | MS.gene93375:intron | 45.0% |
| CAGAGACAACGTTGCTCTCA+AGG | - | chr4.1:81585008-81585027 | MS.gene93375:intron | 50.0% | |
| CTCAAGGGACTTGCCAAGTA+AGG | - | chr4.1:81585024-81585043 | MS.gene93375:intron | 50.0% | |
| TGCTGCTGCAAATGCACCAA+CGG | - | chr4.1:81584505-81584524 | MS.gene93375:intron | 50.0% | |
| !!! | GAGCGAGTTTTTGGTAGAGC+AGG | - | chr4.1:81586176-81586195 | MS.gene93375:intron | 50.0% |
| CTGAGGGAGGGCTCACAATA+GGG | + | chr4.1:81585599-81585618 | None:intergenic | 55.0% | |
| TCTGAGGGAGGGCTCACAAT+AGG | + | chr4.1:81585600-81585619 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 81584371 | 81586884 | 81584371 | ID=MS.gene93375 |
| chr4.1 | mRNA | 81584371 | 81586884 | 81584371 | ID=MS.gene93375.t1;Parent=MS.gene93375 |
| chr4.1 | exon | 81586592 | 81586884 | 81586592 | ID=MS.gene93375.t1.exon1;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81586592 | 81586884 | 81586592 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81586215 | 81586298 | 81586215 | ID=MS.gene93375.t1.exon2;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81586215 | 81586298 | 81586215 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81586059 | 81586119 | 81586059 | ID=MS.gene93375.t1.exon3;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81586059 | 81586119 | 81586059 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81585601 | 81585688 | 81585601 | ID=MS.gene93375.t1.exon4;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81585601 | 81585688 | 81585601 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81585258 | 81585319 | 81585258 | ID=MS.gene93375.t1.exon5;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81585258 | 81585319 | 81585258 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81585058 | 81585123 | 81585058 | ID=MS.gene93375.t1.exon6;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81585058 | 81585123 | 81585058 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81584510 | 81584573 | 81584510 | ID=MS.gene93375.t1.exon7;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81584510 | 81584573 | 81584510 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| chr4.1 | exon | 81584371 | 81584405 | 81584371 | ID=MS.gene93375.t1.exon8;Parent=MS.gene93375.t1 |
| chr4.1 | CDS | 81584371 | 81584405 | 81584371 | ID=cds.MS.gene93375.t1;Parent=MS.gene93375.t1 |
| Gene Sequence |
| Protein sequence |
