Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94824.t1 | AFK48581.1 | 91.9 | 372 | 19 | 1 | 1 | 372 | 1 | 361 | 3.80E-187 | 664.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94824.t1 | Q54M20 | 27.3 | 374 | 219 | 7 | 6 | 366 | 63 | 396 | 1.6e-32 | 142.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94824.t1 | I3T7T9 | 91.9 | 372 | 19 | 1 | 1 | 372 | 1 | 361 | 2.7e-187 | 664.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049850 | MS.gene94824 | 0.802439 | 5.61E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene94824 | 0.826147 | 3.18E-54 | -1.69E-46 |
| MS.gene052611 | MS.gene94824 | 0.821078 | 4.89E-53 | -1.69E-46 |
| MS.gene052612 | MS.gene94824 | 0.818218 | 2.20E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene94824 | 0.801867 | 7.35E-49 | -1.69E-46 |
| MS.gene053900 | MS.gene94824 | 0.819952 | 8.86E-53 | -1.69E-46 |
| MS.gene053998 | MS.gene94824 | 0.802559 | 5.30E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene94824 | 0.810794 | 9.65E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94824 | MS.gene040499 | PPI |
| MS.gene94824 | MS.gene62607 | PPI |
| MS.gene94824 | MS.gene60613 | PPI |
| MS.gene94824 | MS.gene061126 | PPI |
| MS.gene94824 | MS.gene49154 | PPI |
| MS.gene94824 | MS.gene006231 | PPI |
| MS.gene94824 | MS.gene30654 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94824.t1 | MTR_8g042410 | 43.810 | 105 | 59 | 0 | 360 | 464 | 21 | 125 | 3.72e-19 | 90.5 |
| MS.gene94824.t1 | MTR_7g076740 | 43.299 | 97 | 53 | 2 | 370 | 464 | 5 | 101 | 4.39e-18 | 85.1 |
| MS.gene94824.t1 | MTR_8g031360 | 44.565 | 92 | 49 | 2 | 375 | 464 | 11 | 102 | 2.30e-17 | 82.8 |
| MS.gene94824.t1 | MTR_1g100653 | 43.750 | 96 | 53 | 1 | 370 | 464 | 5 | 100 | 2.68e-17 | 82.8 |
| MS.gene94824.t1 | MTR_1g043050 | 41.667 | 96 | 55 | 1 | 370 | 464 | 5 | 100 | 5.09e-17 | 81.3 |
| MS.gene94824.t1 | MTR_3g461490 | 40.625 | 96 | 56 | 1 | 370 | 464 | 5 | 100 | 6.74e-17 | 82.0 |
| MS.gene94824.t1 | MTR_1g076150 | 41.667 | 96 | 55 | 1 | 370 | 464 | 5 | 100 | 8.40e-17 | 80.5 |
| MS.gene94824.t1 | MTR_1g043080 | 40.625 | 96 | 56 | 1 | 370 | 464 | 5 | 100 | 1.31e-16 | 80.1 |
| MS.gene94824.t1 | MTR_4g091490 | 40.816 | 98 | 57 | 1 | 368 | 464 | 4 | 101 | 1.72e-16 | 81.3 |
| MS.gene94824.t1 | MTR_0140s0030 | 40.206 | 97 | 57 | 1 | 369 | 464 | 5 | 101 | 5.20e-16 | 79.3 |
| MS.gene94824.t1 | MTR_0489s0020 | 40.206 | 97 | 57 | 1 | 369 | 464 | 5 | 101 | 5.20e-16 | 79.3 |
| MS.gene94824.t1 | MTR_3g052430 | 42.529 | 87 | 50 | 0 | 378 | 464 | 43 | 129 | 6.03e-16 | 80.5 |
| MS.gene94824.t1 | MTR_3g039990 | 38.144 | 97 | 59 | 1 | 369 | 464 | 5 | 101 | 1.21e-15 | 78.2 |
| MS.gene94824.t1 | MTR_2g034790 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 1.36e-15 | 78.2 |
| MS.gene94824.t1 | MTR_3g011610 | 42.529 | 87 | 50 | 0 | 378 | 464 | 39 | 125 | 2.10e-15 | 79.0 |
| MS.gene94824.t1 | MTR_7g087130 | 38.144 | 97 | 59 | 1 | 369 | 464 | 4 | 100 | 2.82e-15 | 77.4 |
| MS.gene94824.t1 | MTR_2g064160 | 43.820 | 89 | 49 | 1 | 377 | 464 | 11 | 99 | 3.24e-15 | 76.6 |
| MS.gene94824.t1 | MTR_2g011660 | 41.111 | 90 | 52 | 1 | 376 | 464 | 12 | 101 | 4.41e-15 | 76.6 |
| MS.gene94824.t1 | MTR_3g052450 | 40.230 | 87 | 52 | 0 | 378 | 464 | 42 | 128 | 6.09e-15 | 77.4 |
| MS.gene94824.t1 | MTR_6g012180 | 39.175 | 97 | 58 | 1 | 369 | 464 | 4 | 100 | 9.27e-15 | 75.5 |
| MS.gene94824.t1 | MTR_2g089420 | 43.678 | 87 | 49 | 0 | 378 | 464 | 13 | 99 | 1.07e-14 | 76.3 |
| MS.gene94824.t1 | MTR_2g067420 | 41.584 | 101 | 58 | 1 | 365 | 464 | 2 | 102 | 1.24e-14 | 75.1 |
| MS.gene94824.t1 | MTR_5g029840 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 1.52e-14 | 75.1 |
| MS.gene94824.t1 | MTR_4g485530 | 45.977 | 87 | 47 | 0 | 378 | 464 | 14 | 100 | 1.88e-14 | 72.4 |
| MS.gene94824.t1 | MTR_1g085040 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 2.07e-14 | 75.1 |
| MS.gene94824.t1 | MTR_2g089620 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 2.34e-14 | 74.3 |
| MS.gene94824.t1 | MTR_5g088610 | 39.773 | 88 | 52 | 1 | 378 | 464 | 11 | 98 | 2.44e-14 | 74.7 |
| MS.gene94824.t1 | MTR_7g011170 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 3.23e-14 | 73.9 |
| MS.gene94824.t1 | MTR_8g020490 | 39.080 | 87 | 53 | 0 | 378 | 464 | 10 | 96 | 3.39e-14 | 72.8 |
| MS.gene94824.t1 | MTR_3g083540 | 38.542 | 96 | 58 | 1 | 370 | 464 | 34 | 129 | 3.45e-14 | 73.6 |
| MS.gene94824.t1 | MTR_2g097910 | 41.379 | 87 | 51 | 0 | 378 | 464 | 22 | 108 | 3.60e-14 | 73.6 |
| MS.gene94824.t1 | MTR_0063s0090 | 40.000 | 90 | 53 | 1 | 376 | 464 | 11 | 100 | 3.88e-14 | 72.0 |
| MS.gene94824.t1 | MTR_8g027345 | 40.206 | 97 | 58 | 0 | 368 | 464 | 4 | 100 | 5.61e-14 | 72.8 |
| MS.gene94824.t1 | MTR_0008s0390 | 42.529 | 87 | 50 | 0 | 378 | 464 | 15 | 101 | 5.69e-14 | 72.4 |
| MS.gene94824.t1 | MTR_0251s0050 | 42.529 | 87 | 50 | 0 | 378 | 464 | 15 | 101 | 5.74e-14 | 72.4 |
| MS.gene94824.t1 | MTR_0008s0470 | 36.735 | 98 | 61 | 1 | 368 | 464 | 4 | 101 | 5.89e-14 | 72.8 |
| MS.gene94824.t1 | MTR_5g007370 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 6.44e-14 | 72.8 |
| MS.gene94824.t1 | MTR_4g121460 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 7.72e-14 | 72.8 |
| MS.gene94824.t1 | MTR_4g125520 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 8.04e-14 | 72.4 |
| MS.gene94824.t1 | MTR_6g055910 | 36.190 | 105 | 53 | 1 | 360 | 464 | 12 | 102 | 8.46e-14 | 72.0 |
| MS.gene94824.t1 | MTR_4g082290 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 8.63e-14 | 73.6 |
| MS.gene94824.t1 | MTR_5g079670 | 42.529 | 87 | 50 | 0 | 378 | 464 | 13 | 99 | 8.69e-14 | 70.9 |
| MS.gene94824.t1 | MTR_5g014990 | 39.773 | 88 | 52 | 1 | 378 | 464 | 14 | 101 | 9.33e-14 | 72.4 |
| MS.gene94824.t1 | MTR_7g096930 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 9.34e-14 | 72.0 |
| MS.gene94824.t1 | MTR_7g115650 | 36.458 | 96 | 60 | 1 | 370 | 464 | 5 | 100 | 9.45e-14 | 70.5 |
| MS.gene94824.t1 | MTR_4g102380 | 40.625 | 96 | 56 | 1 | 370 | 464 | 5 | 100 | 9.51e-14 | 71.6 |
| MS.gene94824.t1 | MTR_1g110460 | 39.286 | 84 | 51 | 0 | 381 | 464 | 31 | 114 | 1.08e-13 | 72.0 |
| MS.gene94824.t1 | MTR_7g117730 | 36.458 | 96 | 60 | 1 | 370 | 464 | 5 | 100 | 1.13e-13 | 71.2 |
| MS.gene94824.t1 | MTR_7g035075 | 38.947 | 95 | 54 | 1 | 370 | 464 | 12 | 102 | 1.20e-13 | 70.1 |
| MS.gene94824.t1 | MTR_7g010210 | 37.113 | 97 | 60 | 1 | 369 | 464 | 4 | 100 | 1.52e-13 | 72.0 |
| MS.gene94824.t1 | MTR_1g045610 | 42.529 | 87 | 50 | 0 | 378 | 464 | 23 | 109 | 1.54e-13 | 70.9 |
| MS.gene94824.t1 | MTR_2g095520 | 40.909 | 88 | 51 | 1 | 378 | 464 | 14 | 101 | 1.60e-13 | 71.6 |
| MS.gene94824.t1 | MTR_7g010210 | 37.113 | 97 | 60 | 1 | 369 | 464 | 4 | 100 | 1.69e-13 | 70.9 |
| MS.gene94824.t1 | MTR_4g100720 | 41.176 | 85 | 50 | 0 | 380 | 464 | 17 | 101 | 1.78e-13 | 68.9 |
| MS.gene94824.t1 | MTR_1g100667 | 40.230 | 87 | 52 | 0 | 378 | 464 | 15 | 101 | 1.95e-13 | 70.9 |
| MS.gene94824.t1 | MTR_2g088170 | 42.222 | 90 | 51 | 1 | 376 | 464 | 28 | 117 | 2.02e-13 | 72.4 |
| MS.gene94824.t1 | MTR_4g478180 | 38.542 | 96 | 58 | 1 | 370 | 464 | 6 | 101 | 2.28e-13 | 71.6 |
| MS.gene94824.t1 | MTR_4g057635 | 38.144 | 97 | 58 | 2 | 370 | 464 | 5 | 101 | 2.28e-13 | 71.2 |
| MS.gene94824.t1 | MTR_4g128670 | 39.773 | 88 | 52 | 1 | 378 | 464 | 14 | 101 | 2.42e-13 | 71.6 |
| MS.gene94824.t1 | MTR_4g097570 | 37.113 | 97 | 59 | 2 | 370 | 464 | 5 | 101 | 2.42e-13 | 70.9 |
| MS.gene94824.t1 | MTR_2g089450 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 2.46e-13 | 70.1 |
| MS.gene94824.t1 | MTR_7g110830 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 2.47e-13 | 71.6 |
| MS.gene94824.t1 | MTR_1g017140 | 39.773 | 88 | 52 | 1 | 378 | 464 | 14 | 101 | 2.60e-13 | 71.2 |
| MS.gene94824.t1 | MTR_1g085640 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 2.60e-13 | 71.6 |
| MS.gene94824.t1 | MTR_0008s0280 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 2.97e-13 | 69.7 |
| MS.gene94824.t1 | MTR_1g112760 | 41.379 | 87 | 51 | 0 | 378 | 464 | 15 | 101 | 4.03e-13 | 69.3 |
| MS.gene94824.t1 | MTR_6g006030 | 38.947 | 95 | 54 | 1 | 370 | 464 | 12 | 102 | 4.16e-13 | 68.6 |
| MS.gene94824.t1 | MTR_1g062940 | 40.230 | 87 | 52 | 0 | 378 | 464 | 8 | 94 | 4.37e-13 | 68.9 |
| MS.gene94824.t1 | MTR_5g078140 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 4.54e-13 | 70.5 |
| MS.gene94824.t1 | MTR_2g096380 | 41.379 | 87 | 51 | 0 | 378 | 464 | 8 | 94 | 4.59e-13 | 69.3 |
| MS.gene94824.t1 | MTR_3g065440 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 5.94e-13 | 70.1 |
| MS.gene94824.t1 | MTR_6g090405 | 37.778 | 90 | 54 | 2 | 377 | 464 | 12 | 101 | 6.30e-13 | 68.9 |
| MS.gene94824.t1 | MTR_3g028740 | 43.182 | 88 | 48 | 2 | 378 | 464 | 24 | 110 | 6.55e-13 | 70.1 |
| MS.gene94824.t1 | MTR_2g099740 | 40.449 | 89 | 52 | 1 | 377 | 464 | 12 | 100 | 7.11e-13 | 70.5 |
| MS.gene94824.t1 | MTR_7g111290 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 8.44e-13 | 70.1 |
| MS.gene94824.t1 | MTR_3g103570 | 38.636 | 88 | 53 | 1 | 378 | 464 | 14 | 101 | 9.51e-13 | 69.7 |
| MS.gene94824.t1 | MTR_6g012690 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 9.63e-13 | 69.7 |
| MS.gene94824.t1 | MTR_1g073170 | 41.379 | 87 | 51 | 0 | 378 | 464 | 22 | 108 | 1.01e-12 | 68.6 |
| MS.gene94824.t1 | MTR_3g077110 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 1.05e-12 | 69.7 |
| MS.gene94824.t1 | MTR_1g086530 | 37.931 | 87 | 54 | 0 | 378 | 464 | 35 | 121 | 1.08e-12 | 68.9 |
| MS.gene94824.t1 | MTR_4g073420 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 1.30e-12 | 68.6 |
| MS.gene94824.t1 | MTR_8g017440 | 40.449 | 89 | 52 | 1 | 377 | 464 | 12 | 100 | 1.34e-12 | 69.3 |
| MS.gene94824.t1 | MTR_8g095390 | 39.080 | 87 | 53 | 0 | 378 | 464 | 14 | 100 | 1.39e-12 | 68.9 |
| MS.gene94824.t1 | MTR_7g102110 | 39.773 | 88 | 52 | 1 | 378 | 464 | 14 | 101 | 1.48e-12 | 68.2 |
| MS.gene94824.t1 | MTR_1g021230 | 37.931 | 87 | 54 | 0 | 378 | 464 | 59 | 145 | 1.59e-12 | 69.7 |
| MS.gene94824.t1 | MTR_6g009430 | 38.144 | 97 | 59 | 1 | 369 | 464 | 4 | 100 | 1.66e-12 | 68.9 |
| MS.gene94824.t1 | MTR_4g063100 | 40.230 | 87 | 52 | 0 | 378 | 464 | 9 | 95 | 1.85e-12 | 67.8 |
| MS.gene94824.t1 | MTR_4g065017 | 40.230 | 87 | 52 | 0 | 378 | 464 | 19 | 105 | 2.06e-12 | 68.6 |
| MS.gene94824.t1 | MTR_0247s0040 | 39.773 | 88 | 53 | 0 | 378 | 465 | 9 | 96 | 2.18e-12 | 65.9 |
| MS.gene94824.t1 | MTR_1g086510 | 36.667 | 90 | 56 | 1 | 376 | 464 | 20 | 109 | 2.25e-12 | 67.8 |
| MS.gene94824.t1 | MTR_8g017540 | 40.449 | 89 | 52 | 1 | 377 | 464 | 58 | 146 | 2.94e-12 | 68.6 |
| MS.gene94824.t1 | MTR_4g105130 | 40.230 | 87 | 52 | 0 | 378 | 464 | 14 | 100 | 2.95e-12 | 68.2 |
| MS.gene94824.t1 | MTR_5g042030 | 37.634 | 93 | 57 | 1 | 373 | 464 | 3 | 95 | 3.29e-12 | 67.4 |
| MS.gene94824.t1 | MTR_3g101290 | 36.364 | 88 | 55 | 1 | 377 | 464 | 36 | 122 | 3.35e-12 | 66.2 |
| MS.gene94824.t1 | MTR_3g074520 | 36.458 | 96 | 60 | 1 | 370 | 464 | 5 | 100 | 3.40e-12 | 68.2 |
| MS.gene94824.t1 | MTR_5g049190 | 37.500 | 88 | 54 | 1 | 377 | 464 | 18 | 104 | 4.55e-12 | 66.2 |
| MS.gene94824.t1 | MTR_4g097570 | 36.735 | 98 | 59 | 3 | 370 | 464 | 5 | 102 | 6.53e-12 | 66.6 |
| MS.gene94824.t1 | MTR_7g017260 | 39.175 | 97 | 56 | 3 | 374 | 467 | 22 | 118 | 7.36e-12 | 66.2 |
| MS.gene94824.t1 | MTR_8g060940 | 39.773 | 88 | 53 | 0 | 378 | 465 | 9 | 96 | 8.84e-12 | 65.5 |
| MS.gene94824.t1 | MTR_3g097450 | 40.230 | 87 | 52 | 0 | 378 | 464 | 14 | 100 | 9.01e-12 | 66.2 |
| MS.gene94824.t1 | MTR_0193s0090 | 39.773 | 88 | 53 | 0 | 378 | 465 | 9 | 96 | 9.11e-12 | 64.7 |
| MS.gene94824.t1 | MTR_4g105660 | 34.737 | 95 | 55 | 2 | 373 | 464 | 175 | 265 | 1.11e-11 | 67.0 |
| MS.gene94824.t1 | MTR_5g079120 | 37.500 | 88 | 55 | 0 | 378 | 465 | 63 | 150 | 1.24e-11 | 65.9 |
| MS.gene94824.t1 | MTR_8g017390 | 41.176 | 85 | 49 | 1 | 381 | 464 | 17 | 101 | 1.34e-11 | 67.0 |
| MS.gene94824.t1 | MTR_5g088080 | 34.091 | 88 | 57 | 1 | 378 | 464 | 14 | 101 | 1.59e-11 | 65.1 |
| MS.gene94824.t1 | MTR_5g088150 | 34.091 | 88 | 57 | 1 | 378 | 464 | 14 | 101 | 1.59e-11 | 65.1 |
| MS.gene94824.t1 | MTR_5g488210 | 34.091 | 88 | 57 | 1 | 378 | 464 | 14 | 101 | 1.59e-11 | 65.1 |
| MS.gene94824.t1 | MTR_5g078860 | 38.636 | 88 | 54 | 0 | 378 | 465 | 9 | 96 | 1.79e-11 | 65.5 |
| MS.gene94824.t1 | MTR_5g062790 | 35.227 | 88 | 56 | 1 | 378 | 464 | 11 | 98 | 1.80e-11 | 65.5 |
| MS.gene94824.t1 | MTR_5g078800 | 38.636 | 88 | 54 | 0 | 378 | 465 | 9 | 96 | 1.91e-11 | 64.7 |
| MS.gene94824.t1 | MTR_5g088640 | 34.091 | 88 | 57 | 1 | 378 | 464 | 14 | 101 | 2.03e-11 | 65.1 |
| MS.gene94824.t1 | MTR_5g488170 | 34.091 | 88 | 57 | 1 | 378 | 464 | 14 | 101 | 2.27e-11 | 64.3 |
| MS.gene94824.t1 | MTR_5g078910 | 38.636 | 88 | 54 | 0 | 378 | 465 | 9 | 96 | 2.56e-11 | 65.1 |
| MS.gene94824.t1 | MTR_5g078950 | 39.560 | 91 | 54 | 1 | 376 | 465 | 6 | 96 | 2.57e-11 | 64.3 |
| MS.gene94824.t1 | MTR_7g450950 | 35.227 | 88 | 56 | 1 | 377 | 464 | 156 | 242 | 2.66e-11 | 65.1 |
| MS.gene94824.t1 | MTR_7g109320 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 2.77e-11 | 65.5 |
| MS.gene94824.t1 | MTR_8g017340 | 40.000 | 85 | 50 | 1 | 381 | 464 | 17 | 101 | 3.28e-11 | 65.9 |
| MS.gene94824.t1 | MTR_4g019370 | 34.091 | 88 | 57 | 1 | 377 | 464 | 37 | 123 | 3.34e-11 | 65.1 |
| MS.gene94824.t1 | MTR_4g082230 | 37.113 | 97 | 61 | 0 | 368 | 464 | 4 | 100 | 3.56e-11 | 65.5 |
| MS.gene94824.t1 | MTR_8g098860 | 37.079 | 89 | 55 | 1 | 377 | 464 | 12 | 100 | 3.61e-11 | 64.7 |
| MS.gene94824.t1 | MTR_3g077650 | 35.227 | 88 | 56 | 1 | 377 | 464 | 180 | 266 | 3.99e-11 | 65.5 |
| MS.gene94824.t1 | MTR_5g010020 | 37.079 | 89 | 55 | 1 | 377 | 464 | 12 | 100 | 4.17e-11 | 64.7 |
| MS.gene94824.t1 | MTR_5g010650 | 36.364 | 88 | 55 | 1 | 377 | 464 | 109 | 195 | 4.36e-11 | 65.5 |
| MS.gene94824.t1 | MTR_0001s0360 | 38.636 | 88 | 54 | 0 | 378 | 465 | 9 | 96 | 5.02e-11 | 63.5 |
| MS.gene94824.t1 | MTR_5g079290 | 37.500 | 88 | 55 | 0 | 378 | 465 | 19 | 106 | 5.24e-11 | 63.5 |
| MS.gene94824.t1 | MTR_0197s0010 | 40.698 | 86 | 51 | 0 | 380 | 465 | 5 | 90 | 5.60e-11 | 62.8 |
| MS.gene94824.t1 | MTR_7g061550 | 34.444 | 90 | 57 | 2 | 378 | 465 | 7 | 96 | 6.13e-11 | 64.3 |
| MS.gene94824.t1 | MTR_8g017500 | 38.202 | 89 | 54 | 1 | 377 | 464 | 12 | 100 | 8.06e-11 | 63.9 |
| MS.gene94824.t1 | MTR_5g078930 | 36.364 | 88 | 56 | 0 | 378 | 465 | 11 | 98 | 9.38e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94824.t1 | AT1G04130 | 62.903 | 372 | 125 | 3 | 1 | 371 | 1 | 360 | 8.26e-169 | 479 |
| MS.gene94824.t1 | AT1G04130 | 59.636 | 275 | 98 | 3 | 98 | 371 | 1 | 263 | 1.49e-112 | 333 |
| MS.gene94824.t1 | AT3G61250 | 42.708 | 96 | 54 | 1 | 370 | 464 | 5 | 100 | 2.70e-18 | 85.9 |
| MS.gene94824.t1 | AT5G55020 | 42.857 | 91 | 52 | 0 | 374 | 464 | 24 | 114 | 5.00e-17 | 84.0 |
| MS.gene94824.t1 | AT3G11440 | 43.678 | 87 | 49 | 0 | 378 | 464 | 43 | 129 | 8.54e-17 | 83.2 |
| MS.gene94824.t1 | AT5G56110 | 41.667 | 96 | 55 | 1 | 370 | 464 | 5 | 100 | 1.33e-16 | 81.3 |
| MS.gene94824.t1 | AT3G11440 | 43.678 | 87 | 49 | 0 | 378 | 464 | 43 | 129 | 1.83e-16 | 82.4 |
| MS.gene94824.t1 | AT3G11440 | 43.678 | 87 | 49 | 0 | 378 | 464 | 43 | 129 | 1.83e-16 | 82.4 |
| MS.gene94824.t1 | AT3G11440 | 43.678 | 87 | 49 | 0 | 378 | 464 | 43 | 129 | 1.83e-16 | 82.4 |
| MS.gene94824.t1 | AT1G22640 | 45.977 | 87 | 47 | 0 | 378 | 464 | 14 | 100 | 9.50e-16 | 77.4 |
| MS.gene94824.t1 | AT5G06100 | 43.678 | 87 | 49 | 0 | 378 | 464 | 34 | 120 | 9.72e-16 | 79.7 |
| MS.gene94824.t1 | AT5G35550 | 41.584 | 101 | 58 | 1 | 365 | 464 | 2 | 102 | 1.43e-15 | 77.0 |
| MS.gene94824.t1 | AT5G06100 | 43.678 | 87 | 49 | 0 | 378 | 464 | 34 | 120 | 1.61e-15 | 79.3 |
| MS.gene94824.t1 | AT5G06100 | 43.678 | 87 | 49 | 0 | 378 | 464 | 34 | 120 | 1.61e-15 | 79.3 |
| MS.gene94824.t1 | AT5G06100 | 43.678 | 87 | 49 | 0 | 378 | 464 | 34 | 120 | 1.61e-15 | 79.3 |
| MS.gene94824.t1 | AT5G06100 | 43.678 | 87 | 49 | 0 | 378 | 464 | 34 | 120 | 1.61e-15 | 79.3 |
| MS.gene94824.t1 | AT1G16490 | 40.594 | 101 | 59 | 1 | 365 | 464 | 2 | 102 | 1.81e-15 | 77.0 |
| MS.gene94824.t1 | AT2G32460 | 41.111 | 90 | 52 | 1 | 376 | 464 | 5 | 94 | 1.87e-15 | 79.0 |
| MS.gene94824.t1 | AT2G32460 | 41.111 | 90 | 52 | 1 | 376 | 464 | 17 | 106 | 2.03e-15 | 79.0 |
| MS.gene94824.t1 | AT3G46130 | 44.828 | 87 | 48 | 0 | 378 | 464 | 11 | 97 | 2.30e-15 | 76.3 |
| MS.gene94824.t1 | AT5G59780 | 44.828 | 87 | 48 | 0 | 378 | 464 | 10 | 96 | 2.51e-15 | 75.9 |
| MS.gene94824.t1 | AT2G47460 | 40.625 | 96 | 56 | 1 | 370 | 464 | 5 | 100 | 2.61e-15 | 77.8 |
| MS.gene94824.t1 | AT3G13540 | 39.583 | 96 | 57 | 1 | 370 | 464 | 16 | 111 | 2.71e-15 | 75.9 |
| MS.gene94824.t1 | AT4G21440 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 2.73e-15 | 77.4 |
| MS.gene94824.t1 | AT3G47600 | 38.144 | 97 | 59 | 1 | 369 | 464 | 4 | 100 | 3.09e-15 | 77.0 |
| MS.gene94824.t1 | AT2G26960 | 40.426 | 94 | 56 | 0 | 371 | 464 | 15 | 108 | 3.31e-15 | 77.8 |
| MS.gene94824.t1 | AT5G62470 | 39.175 | 97 | 57 | 2 | 369 | 464 | 4 | 99 | 3.97e-15 | 77.0 |
| MS.gene94824.t1 | AT3G23250 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 4.56e-15 | 75.9 |
| MS.gene94824.t1 | AT2G31180 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 4.69e-15 | 75.5 |
| MS.gene94824.t1 | AT5G62470 | 38.144 | 97 | 59 | 1 | 369 | 464 | 4 | 100 | 4.85e-15 | 76.6 |
| MS.gene94824.t1 | AT3G27920 | 41.379 | 87 | 51 | 0 | 378 | 464 | 16 | 102 | 8.42e-15 | 73.9 |
| MS.gene94824.t1 | AT1G08810 | 38.144 | 97 | 59 | 1 | 369 | 464 | 4 | 100 | 9.73e-15 | 75.1 |
| MS.gene94824.t1 | AT5G52600 | 41.573 | 89 | 51 | 1 | 377 | 464 | 12 | 100 | 1.07e-14 | 73.2 |
| MS.gene94824.t1 | AT4G22680 | 40.625 | 96 | 56 | 1 | 370 | 464 | 5 | 100 | 1.25e-14 | 74.3 |
| MS.gene94824.t1 | AT1G25340 | 39.080 | 87 | 53 | 0 | 378 | 464 | 20 | 106 | 1.82e-14 | 74.3 |
| MS.gene94824.t1 | AT5G26660 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 1.83e-14 | 75.1 |
| MS.gene94824.t1 | AT4G37780 | 37.113 | 97 | 59 | 2 | 370 | 464 | 5 | 101 | 2.24e-14 | 74.3 |
| MS.gene94824.t1 | AT1G79180 | 39.604 | 101 | 60 | 1 | 365 | 464 | 2 | 102 | 2.43e-14 | 73.9 |
| MS.gene94824.t1 | AT5G14750 | 40.230 | 87 | 52 | 0 | 378 | 464 | 18 | 104 | 2.56e-14 | 72.0 |
| MS.gene94824.t1 | AT1G74430 | 41.304 | 92 | 53 | 1 | 374 | 464 | 9 | 100 | 2.61e-14 | 73.6 |
| MS.gene94824.t1 | AT4G34990 | 43.678 | 87 | 49 | 0 | 378 | 464 | 14 | 100 | 2.82e-14 | 73.6 |
| MS.gene94824.t1 | AT4G26930 | 40.230 | 87 | 52 | 0 | 378 | 464 | 21 | 107 | 2.92e-14 | 74.7 |
| MS.gene94824.t1 | AT5G15310 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 3.10e-14 | 72.8 |
| MS.gene94824.t1 | AT5G15310 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 3.41e-14 | 73.9 |
| MS.gene94824.t1 | AT5G49330 | 39.175 | 97 | 58 | 1 | 369 | 464 | 4 | 100 | 3.41e-14 | 74.3 |
| MS.gene94824.t1 | AT5G15310 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 3.49e-14 | 73.9 |
| MS.gene94824.t1 | AT1G56160 | 39.604 | 101 | 60 | 1 | 365 | 464 | 2 | 102 | 3.51e-14 | 73.6 |
| MS.gene94824.t1 | AT3G28910 | 38.144 | 97 | 59 | 1 | 369 | 464 | 4 | 100 | 3.57e-14 | 73.9 |
| MS.gene94824.t1 | AT4G17785 | 38.889 | 90 | 54 | 1 | 376 | 464 | 12 | 101 | 4.03e-14 | 73.9 |
| MS.gene94824.t1 | AT5G10280 | 40.000 | 90 | 53 | 1 | 376 | 464 | 11 | 100 | 4.73e-14 | 73.6 |
| MS.gene94824.t1 | AT4G17785 | 38.889 | 90 | 54 | 1 | 376 | 464 | 12 | 101 | 4.87e-14 | 73.9 |
| MS.gene94824.t1 | AT4G01680 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 5.55e-14 | 72.0 |
| MS.gene94824.t1 | AT4G28110 | 37.778 | 90 | 55 | 1 | 376 | 464 | 11 | 100 | 6.56e-14 | 72.4 |
| MS.gene94824.t1 | AT1G74650 | 37.113 | 97 | 60 | 1 | 369 | 464 | 4 | 100 | 7.10e-14 | 73.2 |
| MS.gene94824.t1 | AT5G65230 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 7.28e-14 | 72.8 |
| MS.gene94824.t1 | AT3G01140 | 39.583 | 96 | 57 | 1 | 370 | 464 | 48 | 143 | 7.69e-14 | 73.6 |
| MS.gene94824.t1 | AT3G12820 | 41.573 | 89 | 51 | 1 | 377 | 464 | 14 | 102 | 9.05e-14 | 71.2 |
| MS.gene94824.t1 | AT3G62610 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 9.07e-14 | 72.8 |
| MS.gene94824.t1 | AT2G26950 | 36.364 | 88 | 56 | 0 | 377 | 464 | 17 | 104 | 9.49e-14 | 73.2 |
| MS.gene94824.t1 | AT3G01140 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 1.04e-13 | 72.8 |
| MS.gene94824.t1 | AT5G40330 | 39.080 | 87 | 53 | 0 | 378 | 464 | 14 | 100 | 1.04e-13 | 70.9 |
| MS.gene94824.t1 | AT5G12870 | 41.379 | 87 | 51 | 0 | 378 | 464 | 20 | 106 | 1.06e-13 | 72.0 |
| MS.gene94824.t1 | AT1G57560 | 40.230 | 87 | 52 | 0 | 378 | 464 | 14 | 100 | 1.25e-13 | 71.6 |
| MS.gene94824.t1 | AT3G24310 | 42.529 | 87 | 50 | 0 | 378 | 464 | 20 | 106 | 1.28e-13 | 71.2 |
| MS.gene94824.t1 | AT1G57560 | 40.230 | 87 | 52 | 0 | 378 | 464 | 14 | 100 | 1.39e-13 | 72.0 |
| MS.gene94824.t1 | AT1G06180 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 1.46e-13 | 70.9 |
| MS.gene94824.t1 | AT4G05100 | 38.889 | 90 | 54 | 1 | 376 | 464 | 12 | 101 | 1.48e-13 | 72.0 |
| MS.gene94824.t1 | AT2G16720 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 1.60e-13 | 71.2 |
| MS.gene94824.t1 | AT4G01680 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 1.64e-13 | 72.0 |
| MS.gene94824.t1 | AT1G74080 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 1.71e-13 | 72.0 |
| MS.gene94824.t1 | AT3G02940 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 1.72e-13 | 71.6 |
| MS.gene94824.t1 | AT3G13890 | 40.449 | 89 | 52 | 1 | 377 | 464 | 12 | 100 | 1.93e-13 | 72.0 |
| MS.gene94824.t1 | AT3G48920 | 40.230 | 87 | 52 | 0 | 378 | 464 | 20 | 106 | 2.26e-13 | 70.5 |
| MS.gene94824.t1 | AT3G02940 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 2.41e-13 | 71.2 |
| MS.gene94824.t1 | AT3G02940 | 38.542 | 96 | 58 | 1 | 370 | 464 | 5 | 100 | 2.41e-13 | 71.2 |
| MS.gene94824.t1 | AT3G28470 | 37.113 | 97 | 60 | 1 | 369 | 464 | 4 | 100 | 2.62e-13 | 71.2 |
| MS.gene94824.t1 | AT5G14340 | 38.542 | 96 | 58 | 1 | 370 | 464 | 17 | 112 | 2.68e-13 | 70.5 |
| MS.gene94824.t1 | AT3G30210 | 40.230 | 87 | 52 | 0 | 378 | 464 | 29 | 115 | 3.55e-13 | 70.1 |
| MS.gene94824.t1 | AT3G27810 | 37.931 | 87 | 54 | 0 | 378 | 464 | 22 | 108 | 4.15e-13 | 69.3 |
| MS.gene94824.t1 | AT4G12350 | 39.583 | 96 | 58 | 0 | 369 | 464 | 5 | 100 | 4.33e-13 | 70.1 |
| MS.gene94824.t1 | AT1G68320 | 38.095 | 84 | 52 | 0 | 381 | 464 | 24 | 107 | 4.37e-13 | 70.1 |
| MS.gene94824.t1 | AT2G47190 | 39.080 | 87 | 53 | 0 | 378 | 464 | 22 | 108 | 4.65e-13 | 69.7 |
| MS.gene94824.t1 | AT5G54230 | 39.080 | 87 | 53 | 0 | 378 | 464 | 14 | 100 | 4.76e-13 | 70.5 |
| MS.gene94824.t1 | AT3G01530 | 39.080 | 87 | 53 | 0 | 378 | 464 | 27 | 113 | 5.39e-13 | 68.6 |
| MS.gene94824.t1 | AT5G16770 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 6.54e-13 | 70.1 |
| MS.gene94824.t1 | AT5G16770 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 6.54e-13 | 70.1 |
| MS.gene94824.t1 | AT1G35515 | 40.230 | 87 | 52 | 0 | 378 | 464 | 14 | 100 | 6.58e-13 | 68.2 |
| MS.gene94824.t1 | AT1G66230 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 7.08e-13 | 69.3 |
| MS.gene94824.t1 | AT5G16770 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 7.89e-13 | 70.1 |
| MS.gene94824.t1 | AT5G16770 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 7.89e-13 | 70.1 |
| MS.gene94824.t1 | AT5G16600 | 39.583 | 96 | 57 | 1 | 370 | 464 | 5 | 100 | 8.05e-13 | 69.7 |
| MS.gene94824.t1 | AT3G49690 | 39.773 | 88 | 52 | 1 | 378 | 464 | 14 | 101 | 8.35e-13 | 69.7 |
| MS.gene94824.t1 | AT1G18570 | 39.560 | 91 | 54 | 1 | 375 | 464 | 11 | 101 | 8.44e-13 | 70.1 |
| MS.gene94824.t1 | AT1G09540 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 9.48e-13 | 70.1 |
| MS.gene94824.t1 | AT5G52260 | 42.529 | 87 | 50 | 0 | 378 | 464 | 14 | 100 | 9.48e-13 | 68.9 |
| MS.gene94824.t1 | AT1G56440 | 32.961 | 179 | 105 | 7 | 35 | 210 | 88 | 254 | 1.03e-12 | 70.5 |
| MS.gene94824.t1 | AT4G38620 | 41.379 | 87 | 51 | 0 | 378 | 464 | 14 | 100 | 1.05e-12 | 68.9 |
| MS.gene94824.t1 | AT3G12720 | 38.202 | 89 | 54 | 1 | 377 | 464 | 22 | 110 | 1.09e-12 | 69.3 |
| MS.gene94824.t1 | AT1G56440 | 32.961 | 179 | 105 | 7 | 35 | 210 | 78 | 244 | 1.14e-12 | 70.1 |
| MS.gene94824.t1 | AT5G40350 | 37.931 | 87 | 54 | 0 | 378 | 464 | 19 | 105 | 1.18e-12 | 67.4 |
| MS.gene94824.t1 | AT5G65790 | 38.636 | 88 | 53 | 1 | 378 | 464 | 14 | 101 | 1.24e-12 | 69.7 |
| MS.gene94824.t1 | AT4G09460 | 40.230 | 87 | 52 | 0 | 378 | 464 | 14 | 100 | 1.27e-12 | 67.8 |
| MS.gene94824.t1 | AT1G18710 | 36.957 | 92 | 57 | 1 | 374 | 464 | 9 | 100 | 1.44e-12 | 68.2 |
| MS.gene94824.t1 | AT4G25560 | 40.230 | 87 | 52 | 0 | 378 | 464 | 12 | 98 | 2.18e-12 | 68.2 |
| MS.gene94824.t1 | AT4G13480 | 40.230 | 87 | 52 | 0 | 378 | 464 | 8 | 94 | 2.25e-12 | 67.8 |
| MS.gene94824.t1 | AT3G27785 | 33.645 | 107 | 70 | 1 | 361 | 467 | 172 | 277 | 2.43e-12 | 68.9 |
| MS.gene94824.t1 | AT1G34670 | 38.889 | 90 | 54 | 1 | 376 | 464 | 11 | 100 | 2.97e-12 | 68.6 |
| MS.gene94824.t1 | AT5G60890 | 37.500 | 96 | 59 | 1 | 370 | 464 | 5 | 100 | 4.91e-12 | 67.0 |
| MS.gene94824.t1 | AT3G08500 | 41.379 | 87 | 51 | 0 | 378 | 464 | 32 | 118 | 5.85e-12 | 67.4 |
| MS.gene94824.t1 | AT5G26660 | 56.364 | 55 | 24 | 0 | 410 | 464 | 15 | 69 | 6.10e-12 | 67.0 |
| MS.gene94824.t1 | AT1G25340 | 37.931 | 87 | 49 | 1 | 378 | 464 | 20 | 101 | 6.93e-12 | 66.2 |
| MS.gene94824.t1 | AT1G25340 | 37.931 | 87 | 49 | 1 | 378 | 464 | 20 | 101 | 7.02e-12 | 66.6 |
| MS.gene94824.t1 | AT5G61420 | 35.556 | 90 | 57 | 1 | 376 | 464 | 11 | 100 | 8.04e-12 | 67.0 |
| MS.gene94824.t1 | AT5G07690 | 34.375 | 96 | 62 | 1 | 370 | 464 | 5 | 100 | 1.06e-11 | 66.6 |
| MS.gene94824.t1 | AT1G48000 | 37.079 | 89 | 55 | 1 | 377 | 464 | 32 | 120 | 1.20e-11 | 65.1 |
| MS.gene94824.t1 | AT5G07700 | 35.556 | 90 | 57 | 1 | 376 | 464 | 11 | 100 | 1.58e-11 | 65.9 |
| MS.gene94824.t1 | AT5G07700 | 35.556 | 90 | 57 | 1 | 376 | 464 | 11 | 100 | 1.58e-11 | 65.9 |
| MS.gene94824.t1 | AT5G40360 | 30.496 | 141 | 96 | 2 | 324 | 464 | 105 | 243 | 1.76e-11 | 65.9 |
| MS.gene94824.t1 | AT5G23000 | 37.113 | 97 | 59 | 2 | 370 | 464 | 5 | 101 | 2.31e-11 | 65.5 |
| MS.gene94824.t1 | AT5G58850 | 34.091 | 88 | 57 | 1 | 377 | 464 | 104 | 190 | 4.06e-11 | 65.5 |
| MS.gene94824.t1 | AT1G63910 | 37.079 | 89 | 55 | 1 | 377 | 464 | 12 | 100 | 7.41e-11 | 64.3 |
| MS.gene94824.t1 | AT3G13890 | 36.735 | 98 | 52 | 2 | 377 | 464 | 12 | 109 | 7.64e-11 | 63.9 |
Find 99 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTACTTTGATCCATTTC+GGG | 0.194904 | 1.4:+55966869 | None:intergenic |
| CTTCTTCAATTCCTCATTCT+TGG | 0.218109 | 1.4:+55968930 | None:intergenic |
| TCATTTACTTTGATCCATTT+CGG | 0.218966 | 1.4:+55966868 | None:intergenic |
| AACAAAACATTTCATATAAA+AGG | 0.234209 | 1.4:+55968351 | None:intergenic |
| TAAAAGAGCGTGGACTTTAC+AGG | 0.289074 | 1.4:-55964509 | MS.gene94824:CDS |
| TCTTACCCATCTTCACATAT+TGG | 0.336932 | 1.4:+55969959 | None:intergenic |
| TTGTCAAATGGGTCTTCATT+TGG | 0.352533 | 1.4:-55968956 | MS.gene94824:CDS |
| GCAGATTGAAACTAAGATAC+TGG | 0.354334 | 1.4:-55968899 | MS.gene94824:CDS |
| TTCTTCAATTCCTCATTCTT+GGG | 0.354589 | 1.4:+55968931 | None:intergenic |
| ACTCCTTCAATATCTATTAG+AGG | 0.356893 | 1.4:-55967992 | MS.gene94824:CDS |
| GCCCATGTTAATTTGCTACT+TGG | 0.360457 | 1.4:-55969844 | MS.gene94824:CDS |
| CCTATGTATCGAGAACTTAC+TGG | 0.383520 | 1.4:-55968511 | MS.gene94824:CDS |
| GCTACTAGTGGGGAAGTTAT+TGG | 0.385514 | 1.4:-55967958 | MS.gene94824:CDS |
| TTTGAATTTGCTATAAAAGC+TGG | 0.386477 | 1.4:+55966672 | None:intergenic |
| ATCTCAGGAATGATGAAATT+AGG | 0.386785 | 1.4:+55966814 | None:intergenic |
| ACCATTTCACCTGGGATCTC+AGG | 0.398144 | 1.4:+55966799 | None:intergenic |
| TGTTTCCTCGTTGGCATCAA+AGG | 0.399980 | 1.4:+55964342 | None:intergenic |
| GAAAATAGAGGCTTGAAGAT+TGG | 0.400992 | 1.4:-55968538 | MS.gene94824:CDS |
| GTTCATCAGGCTCCCCGAAA+TGG | 0.404916 | 1.4:-55966882 | MS.gene94824:intron |
| CTTTCAAAACTATGGATTGA+AGG | 0.407960 | 1.4:+55964047 | None:intergenic |
| GCAAATTCAAAGATGGAAAG+TGG | 0.409006 | 1.4:-55966660 | MS.gene94824:CDS |
| CACATTCTCCAGTATGTTGT+AGG | 0.418140 | 1.4:+55964413 | None:intergenic |
| TGATAGCAGCAATGGCTTCA+AGG | 0.419657 | 1.4:+55970093 | None:intergenic |
| GTACACACCTTTATATTTGA+AGG | 0.424038 | 1.4:+55969772 | None:intergenic |
| ACAAAAGTAACATCCTTCAT+TGG | 0.426238 | 1.4:-55968468 | MS.gene94824:CDS |
| CAGAAGATCAGCCGCTTTCA+CGG | 0.427915 | 1.4:-55968260 | MS.gene94824:CDS |
| ATCGAGAACTTACTGGGTTA+AGG | 0.432106 | 1.4:-55968504 | MS.gene94824:CDS |
| ATTCAACGAAAAGGAAGCTT+TGG | 0.437825 | 1.4:+55969002 | None:intergenic |
| ATGCAGCTTCCAGGCCGATC+AGG | 0.438084 | 1.4:-55964168 | MS.gene94824:intron |
| AGCACAAGACTATTGTCAAA+TGG | 0.442253 | 1.4:-55968968 | MS.gene94824:CDS |
| GTTTCTGCAATAGAAAATAG+AGG | 0.447295 | 1.4:-55968550 | MS.gene94824:CDS |
| GGGTAACCAATATGTGAAGA+TGG | 0.450218 | 1.4:-55969965 | MS.gene94824:CDS |
| GCTTCCTTTCATACACTTGG+AGG | 0.454416 | 1.4:+55966634 | None:intergenic |
| GTTGTCCCCTTCAAATATAA+AGG | 0.456100 | 1.4:-55969779 | MS.gene94824:intron |
| AAGGGCCCTGTCTTCAAACC+TGG | 0.463397 | 1.4:+55964361 | None:intergenic |
| CTCCGCCCAGGTTTGAAGAC+AGG | 0.466135 | 1.4:-55964367 | MS.gene94824:CDS |
| GTTTCCTCGTTGGCATCAAA+GGG | 0.474169 | 1.4:+55964343 | None:intergenic |
| AACATACTGGAGAATGTGGC+TGG | 0.485380 | 1.4:-55964408 | MS.gene94824:CDS |
| TCTGCATACAAAAGAAGAAC+AGG | 0.488330 | 1.4:+55968445 | None:intergenic |
| GCACAAGACTATTGTCAAAT+GGG | 0.491678 | 1.4:-55968967 | MS.gene94824:CDS |
| TTCCCTCTAATAGATATTGA+AGG | 0.495729 | 1.4:+55967989 | None:intergenic |
| GATGGCGCTATGGATGGAAA+AGG | 0.498578 | 1.4:-55970150 | MS.gene94824:CDS |
| ATCCAACGAATTCAACGAAA+AGG | 0.499699 | 1.4:+55968993 | None:intergenic |
| AGAAGATCAGCCGCTTTCAC+GGG | 0.505271 | 1.4:-55968259 | MS.gene94824:CDS |
| ATCTTCAGCTTTAGAACTCA+AGG | 0.507144 | 1.4:-55970066 | MS.gene94824:intron |
| GACACGAGCCTACAACATAC+TGG | 0.508300 | 1.4:-55964421 | MS.gene94824:CDS |
| TGCCCTTGTGTAGCAATCAA+TGG | 0.510437 | 1.4:+55969921 | None:intergenic |
| TACACACCTTTATATTTGAA+GGG | 0.513059 | 1.4:+55969773 | None:intergenic |
| TGGATTGAAGGGTGCTCTTG+TGG | 0.515096 | 1.4:+55964059 | None:intergenic |
| TGTAAACAACACGCAGCTCT+AGG | 0.516136 | 1.4:-55964313 | MS.gene94824:CDS |
| AAAGAAGAACAGGCCAATGA+AGG | 0.520736 | 1.4:+55968455 | None:intergenic |
| CAGGAGGACAATCTGTTGAA+AGG | 0.523173 | 1.4:-55964490 | MS.gene94824:CDS |
| TTTCAAAACTATGGATTGAA+GGG | 0.526238 | 1.4:+55964048 | None:intergenic |
| ATGGAATTACCTGATCGGCC+TGG | 0.526795 | 1.4:+55964159 | None:intergenic |
| ACAGATCAGTGTTTCCTCGT+TGG | 0.528620 | 1.4:+55964333 | None:intergenic |
| AGATTCTTTGATAGCAGCAA+TGG | 0.528920 | 1.4:+55970085 | None:intergenic |
| TCATTTGGATCCCAAGAATG+AGG | 0.529648 | 1.4:-55968941 | MS.gene94824:CDS |
| CTATGTATCGAGAACTTACT+GGG | 0.529659 | 1.4:-55968510 | MS.gene94824:CDS |
| GAATTGGAAATTCCTTCAGC+GGG | 0.530854 | 1.4:-55964443 | MS.gene94824:CDS |
| GTAGGCTCGTGTCCCGCTGA+AGG | 0.531529 | 1.4:+55964431 | None:intergenic |
| GGCAACGATGGCGCTATGGA+TGG | 0.533170 | 1.4:-55970156 | None:intergenic |
| TAGGCTCTTTCAGAACATCA+TGG | 0.536783 | 1.4:+55966833 | None:intergenic |
| GAAATCCTCAATGAAGTCAC+TGG | 0.541468 | 1.4:+55968414 | None:intergenic |
| TAACGCTATTGCAGAGGCAA+AGG | 0.546218 | 1.4:-55968848 | MS.gene94824:intron |
| CCAGTAAGTTCTCGATACAT+AGG | 0.546495 | 1.4:+55968511 | None:intergenic |
| TTCCAAGTAGCAAATTAACA+TGG | 0.546678 | 1.4:+55969842 | None:intergenic |
| TTCATCATTCCTGAGATCCC+AGG | 0.547369 | 1.4:-55966808 | MS.gene94824:intron |
| CTCCTTCAATATCTATTAGA+GGG | 0.550231 | 1.4:-55967991 | MS.gene94824:CDS |
| AAAGGGCAACGATGGCGCTA+TGG | 0.556727 | 1.4:-55970160 | None:intergenic |
| GGTAACCAATATGTGAAGAT+GGG | 0.559754 | 1.4:-55969964 | MS.gene94824:CDS |
| TATAAAAGGATATCATATCA+AGG | 0.560050 | 1.4:+55968365 | None:intergenic |
| ACGCAGCTCTAGGAAATCGC+TGG | 0.560123 | 1.4:-55964303 | MS.gene94824:CDS |
| AGGGCCCTGTCTTCAAACCT+GGG | 0.564909 | 1.4:+55964362 | None:intergenic |
| AATGGATCAAAGTAAATGAA+AGG | 0.566088 | 1.4:-55966864 | MS.gene94824:CDS |
| CAAATTCAAAGATGGAAAGT+GGG | 0.573070 | 1.4:-55966659 | MS.gene94824:CDS |
| GAACTGCAGCAGCTACTAGT+GGG | 0.574587 | 1.4:-55967969 | MS.gene94824:CDS |
| ATGGCGCTATGGATGGAAAA+GGG | 0.580044 | 1.4:-55970149 | MS.gene94824:CDS |
| CATACTGGAGAATGTGGCTG+GGG | 0.587020 | 1.4:-55964406 | MS.gene94824:CDS |
| TCCGCCCAGGTTTGAAGACA+GGG | 0.592883 | 1.4:-55964366 | MS.gene94824:CDS |
| ACACACCTTTATATTTGAAG+GGG | 0.595045 | 1.4:+55969774 | None:intergenic |
| ACATACTGGAGAATGTGGCT+GGG | 0.595637 | 1.4:-55964407 | MS.gene94824:CDS |
| GGAACTGCAGCAGCTACTAG+TGG | 0.596282 | 1.4:-55967970 | MS.gene94824:CDS |
| TCCAAGTAGCAAATTAACAT+GGG | 0.601319 | 1.4:+55969843 | None:intergenic |
| CTACAACATACTGGAGAATG+TGG | 0.602375 | 1.4:-55964412 | MS.gene94824:CDS |
| ATTTACTTTGATCCATTTCG+GGG | 0.610669 | 1.4:+55966870 | None:intergenic |
| TATGTCCAGTGACTTCATTG+AGG | 0.613206 | 1.4:-55968419 | MS.gene94824:CDS |
| TGGCACGATTATCTCCGCCC+AGG | 0.613914 | 1.4:-55964379 | MS.gene94824:CDS |
| AGAATTGGAAATTCCTTCAG+CGG | 0.617192 | 1.4:-55964444 | MS.gene94824:CDS |
| TGAAGAGAAAGACGCAGTTG+AGG | 0.626108 | 1.4:-55967932 | MS.gene94824:CDS |
| ATGCCATTGATTGCTACACA+AGG | 0.631471 | 1.4:-55969924 | MS.gene94824:CDS |
| AGTTTCTAACGCTATTGCAG+AGG | 0.653391 | 1.4:-55968854 | MS.gene94824:CDS |
| TGCCATTGATTGCTACACAA+GGG | 0.679278 | 1.4:-55969923 | MS.gene94824:CDS |
| AACTGCAGCAGCTACTAGTG+GGG | 0.680793 | 1.4:-55967968 | MS.gene94824:CDS |
| GCCCTGTCTTCAAACCTGGG+CGG | 0.681570 | 1.4:+55964365 | None:intergenic |
| AAGAGCGTGGACTTTACAGG+AGG | 0.683958 | 1.4:-55964506 | MS.gene94824:CDS |
| AAGGTGAACCGAAAACATGT+CGG | 0.696850 | 1.4:+55968384 | None:intergenic |
| ATACTGGAGAATGTGGCTGG+GGG | 0.714709 | 1.4:-55964405 | MS.gene94824:CDS |
| AGGGCCCTTTGATGCCAACG+AGG | 0.728345 | 1.4:-55964347 | MS.gene94824:CDS |
| ATTTATTGAGTTATACTACG+AGG | 0.741669 | 1.4:-55968211 | MS.gene94824:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGTTTTAATATTACATTT+TGG | - | chr1.4:55966584-55966603 | MS.gene94824:intron | 10.0% |
| !! | AAAAAAATAAACAAGATAGT+AGG | - | chr1.4:55969168-55969187 | MS.gene94824:intron | 15.0% |
| !! | AACAAAACATTTCATATAAA+AGG | + | chr1.4:55965857-55965876 | None:intergenic | 15.0% |
| !! | GTAATTCCATTAAAATTTAT+TGG | - | chr1.4:55970059-55970078 | MS.gene94824:intron | 15.0% |
| !! | TTAAAATTTATTGGAATACA+TGG | - | chr1.4:55970068-55970087 | MS.gene94824:CDS | 15.0% |
| !!! | ATTCAATGTTTTTAAATTCT+TGG | - | chr1.4:55966555-55966574 | MS.gene94824:intron | 15.0% |
| !!! | CTTGTTTATTTTTTTGTTAA+GGG | + | chr1.4:55969163-55969182 | None:intergenic | 15.0% |
| !!! | TCTTGTTTATTTTTTTGTTA+AGG | + | chr1.4:55969164-55969183 | None:intergenic | 15.0% |
| !!! | TGTATTCCAATAAATTTTAA+TGG | + | chr1.4:55970068-55970087 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTGCTTTATAAAA+AGG | + | chr1.4:55967165-55967184 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTCAAAATGATT+AGG | + | chr1.4:55968507-55968526 | None:intergenic | 15.0% |
| !! | AAAGAAATCCATTCAAAAAT+TGG | + | chr1.4:55967014-55967033 | None:intergenic | 20.0% |
| !! | AGATAAATTAAAGAGAAGAA+TGG | - | chr1.4:55966637-55966656 | MS.gene94824:intron | 20.0% |
| !! | ATCAAAATAAACACAATTAC+TGG | + | chr1.4:55970017-55970036 | None:intergenic | 20.0% |
| !! | ATCCAAAACCATAATAAAAA+TGG | + | chr1.4:55966489-55966508 | None:intergenic | 20.0% |
| !! | CAAAAATACACAAAAATCAA+AGG | + | chr1.4:55968083-55968102 | None:intergenic | 20.0% |
| !! | CACAATTTATGTTTAAAGAA+GGG | + | chr1.4:55965626-55965645 | None:intergenic | 20.0% |
| !! | TAGTAAGTACAAATTCTTAT+CGG | + | chr1.4:55969241-55969260 | None:intergenic | 20.0% |
| !! | TATAAAAGGATATCATATCA+AGG | + | chr1.4:55965843-55965862 | None:intergenic | 20.0% |
| !! | TGATGTTTCAATAGTAATAA+TGG | - | chr1.4:55965147-55965166 | MS.gene94824:intron | 20.0% |
| !! | TTAAATACATTCTTTATCGT+TGG | + | chr1.4:55967267-55967286 | None:intergenic | 20.0% |
| !!! | AAAGATAATTTGTGTTGTTT+TGG | - | chr1.4:55967728-55967747 | MS.gene94824:intron | 20.0% |
| !!! | AATAATCTTTTTCAGGAAAA+GGG | - | chr1.4:55964220-55964239 | MS.gene94824:intron | 20.0% |
| !!! | AATTAAGTTGTTTATCGAAA+CGG | - | chr1.4:55965087-55965106 | MS.gene94824:intron | 20.0% |
| !!! | ATACTAGTTTTGTGTATATA+TGG | - | chr1.4:55965889-55965908 | MS.gene94824:intron | 20.0% |
| !!! | GTGTATTTTTGAAATATACA+TGG | - | chr1.4:55968092-55968111 | MS.gene94824:intron | 20.0% |
| !!! | TCAAATTTTGTTTTTCACTT+GGG | - | chr1.4:55967828-55967847 | MS.gene94824:intron | 20.0% |
| !!! | TTCAAATTTTGTTTTTCACT+TGG | - | chr1.4:55967827-55967846 | MS.gene94824:intron | 20.0% |
| !!! | TTTGAAAACCAATTTTTGAA+TGG | - | chr1.4:55967003-55967022 | MS.gene94824:intron | 20.0% |
| !!! | TTTGATTTCAGATTTTTACA+AGG | - | chr1.4:55967771-55967790 | MS.gene94824:intron | 20.0% |
| !!! | TTTTATAGCAAATTCAAAGA+TGG | - | chr1.4:55967538-55967557 | MS.gene94824:intron | 20.0% |
| ! | AAAAAGAAAAAAAACTCCCT+TGG | - | chr1.4:55967177-55967196 | MS.gene94824:intron | 25.0% |
| ! | AAACAACGTAATAAAATGAG+CGG | - | chr1.4:55969088-55969107 | MS.gene94824:intron | 25.0% |
| ! | AAACCAAACACTACATAAAA+AGG | - | chr1.4:55968272-55968291 | MS.gene94824:CDS | 25.0% |
| ! | AACCAAACACTACATAAAAA+GGG | - | chr1.4:55968273-55968292 | MS.gene94824:CDS | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr1.4:55964470-55964489 | None:intergenic | 25.0% |
| ! | AATGGATCAAAGTAAATGAA+AGG | - | chr1.4:55967341-55967360 | MS.gene94824:intron | 25.0% |
| ! | AATGGTAACTGTGATTTATT+AGG | - | chr1.4:55965165-55965184 | MS.gene94824:intron | 25.0% |
| ! | AATTATAATGCTAGAATTGG+AGG | - | chr1.4:55967657-55967676 | MS.gene94824:intron | 25.0% |
| ! | ACAGTATGAACCATTATATT+AGG | + | chr1.4:55966393-55966412 | None:intergenic | 25.0% |
| ! | ACTGTGTTAAAGTAATAACT+TGG | - | chr1.4:55966408-55966427 | MS.gene94824:intron | 25.0% |
| ! | ACTTCATTTCCCTAATATAA+TGG | - | chr1.4:55966380-55966399 | MS.gene94824:intron | 25.0% |
| ! | AGTACAAAATGTTGTCAAAT+AGG | + | chr1.4:55965469-55965488 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | + | chr1.4:55964469-55964488 | None:intergenic | 25.0% |
| ! | ATGTTATCCTAAACAATACA+TGG | + | chr1.4:55964816-55964835 | None:intergenic | 25.0% |
| ! | ATTCTATCTTTCCATTGTAT+GGG | - | chr1.4:55969437-55969456 | MS.gene94824:intron | 25.0% |
| ! | ATTTATTGAGTTATACTACG+AGG | - | chr1.4:55965994-55966013 | MS.gene94824:intron | 25.0% |
| ! | CACATATGTTTAACAAAATG+AGG | - | chr1.4:55967232-55967251 | MS.gene94824:intron | 25.0% |
| ! | CAGTATGAACCATTATATTA+GGG | + | chr1.4:55966392-55966411 | None:intergenic | 25.0% |
| ! | CTCAATTATAATGCTAGAAT+TGG | - | chr1.4:55967654-55967673 | MS.gene94824:intron | 25.0% |
| ! | CTGTGTTAAAGTAATAACTT+GGG | - | chr1.4:55966409-55966428 | MS.gene94824:intron | 25.0% |
| ! | CTTAACTAATCTCCATATAT+AGG | - | chr1.4:55969342-55969361 | MS.gene94824:intron | 25.0% |
| ! | GCACAATTTATGTTTAAAGA+AGG | + | chr1.4:55965627-55965646 | None:intergenic | 25.0% |
| ! | GTAACTACATAGTTTATTTC+AGG | + | chr1.4:55968895-55968914 | None:intergenic | 25.0% |
| ! | GTACAAAATGTTGTCAAATA+GGG | + | chr1.4:55965468-55965487 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+GGG | + | chr1.4:55965467-55965486 | None:intergenic | 25.0% |
| ! | TACACACCTTTATATTTGAA+GGG | + | chr1.4:55964435-55964454 | None:intergenic | 25.0% |
| ! | TCATTTACTTTGATCCATTT+CGG | + | chr1.4:55967340-55967359 | None:intergenic | 25.0% |
| ! | TCTTTAAACATAAATTGTGC+AGG | - | chr1.4:55965627-55965646 | MS.gene94824:intron | 25.0% |
| ! | TGCATAAATTTCAGAATGAA+AGG | + | chr1.4:55968722-55968741 | None:intergenic | 25.0% |
| ! | TGTAAGGATTGATATCAAAA+CGG | + | chr1.4:55967891-55967910 | None:intergenic | 25.0% |
| ! | TTCAATGATTGTTAAACCTA+TGG | + | chr1.4:55969030-55969049 | None:intergenic | 25.0% |
| ! | TTGGAATACATGGAAAAAAA+AGG | - | chr1.4:55970078-55970097 | MS.gene94824:CDS | 25.0% |
| ! | TTGTTAAACATATGTGACAA+GGG | + | chr1.4:55967228-55967247 | None:intergenic | 25.0% |
| ! | TTTGTTAAACATATGTGACA+AGG | + | chr1.4:55967229-55967248 | None:intergenic | 25.0% |
| !! | AAAATACGTTTGATAGCTAA+GGG | + | chr1.4:55965925-55965944 | None:intergenic | 25.0% |
| !! | CAATTCTTCTTTTTGACAAA+AGG | + | chr1.4:55969211-55969230 | None:intergenic | 25.0% |
| !! | CATATCACTTCTTTGATAAT+GGG | + | chr1.4:55968559-55968578 | None:intergenic | 25.0% |
| !! | CTAAAAGTACACAATTTCAA+TGG | + | chr1.4:55966034-55966053 | None:intergenic | 25.0% |
| !! | GTTTTGTAGAGAAAAACAAA+GGG | - | chr1.4:55969737-55969756 | MS.gene94824:intron | 25.0% |
| !! | TAAAGGTGTGTACTTTATTA+TGG | - | chr1.4:55964443-55964462 | MS.gene94824:CDS | 25.0% |
| !! | TCACTATAAATCTTGTCTTT+TGG | - | chr1.4:55968225-55968244 | MS.gene94824:CDS | 25.0% |
| !! | TTTTAATGGAATTACCTGAT+CGG | + | chr1.4:55970054-55970073 | None:intergenic | 25.0% |
| !!! | AGCCATTTTTATTATGGTTT+TGG | - | chr1.4:55966484-55966503 | MS.gene94824:intron | 25.0% |
| !!! | ATAAGTTTTGTAAGACCAAT+TGG | + | chr1.4:55964656-55964675 | None:intergenic | 25.0% |
| !!! | CAATAATCTTTTTCAGGAAA+AGG | - | chr1.4:55964219-55964238 | MS.gene94824:intron | 25.0% |
| !!! | CAATTACTGGTGTTTTTAAA+TGG | + | chr1.4:55970004-55970023 | None:intergenic | 25.0% |
| !!! | CTTACATAAGCTATTTCTAT+AGG | - | chr1.4:55964503-55964522 | MS.gene94824:CDS | 25.0% |
| !!! | GTTTTGGTACATGTATAATT+TGG | - | chr1.4:55967744-55967763 | MS.gene94824:intron | 25.0% |
| !!! | TAAGTTTTGTAAGACCAATT+GGG | + | chr1.4:55964655-55964674 | None:intergenic | 25.0% |
| !!! | TTTGAATTTGCTATAAAAGC+TGG | + | chr1.4:55967536-55967555 | None:intergenic | 25.0% |
| !!! | TTTGACATGGTGATATTTTT+TGG | - | chr1.4:55966061-55966080 | MS.gene94824:intron | 25.0% |
| !!! | TTTTAGTTACTAGTTTGACA+TGG | - | chr1.4:55966048-55966067 | MS.gene94824:intron | 25.0% |
| AAACAACAATGCAAACTTTC+CGG | - | chr1.4:55968663-55968682 | MS.gene94824:intron | 30.0% | |
| AACATCTTGCAGATATACAT+GGG | + | chr1.4:55969604-55969623 | None:intergenic | 30.0% | |
| ACAAAAGTAACATCCTTCAT+TGG | - | chr1.4:55965737-55965756 | MS.gene94824:intron | 30.0% | |
| ACACACCTTTATATTTGAAG+GGG | + | chr1.4:55964434-55964453 | None:intergenic | 30.0% | |
| ACGTAGAAAAACTAAAATGC+AGG | - | chr1.4:55967989-55968008 | MS.gene94824:CDS | 30.0% | |
| ACTCCTTCAATATCTATTAG+AGG | - | chr1.4:55966213-55966232 | MS.gene94824:intron | 30.0% | |
| AGAAAAACAAAGGGAAGAAT+TGG | - | chr1.4:55969746-55969765 | MS.gene94824:intron | 30.0% | |
| AGCTAAAAAGGCAAATTGTA+AGG | + | chr1.4:55967907-55967926 | None:intergenic | 30.0% | |
| AGTACAAATTCTTATCGGAT+CGG | + | chr1.4:55969236-55969255 | None:intergenic | 30.0% | |
| AGTCTTAGAGTTATGACTAT+GGG | + | chr1.4:55966727-55966746 | None:intergenic | 30.0% | |
| AGTTAGTGAAATCTATGACT+AGG | - | chr1.4:55966692-55966711 | MS.gene94824:CDS | 30.0% | |
| ATCTCAGGAATGATGAAATT+AGG | + | chr1.4:55967394-55967413 | None:intergenic | 30.0% | |
| ATGAATCAGTTTCAATCCAA+AGG | + | chr1.4:55968789-55968808 | None:intergenic | 30.0% | |
| ATTCATAATACAGAGCTCTA+TGG | - | chr1.4:55969483-55969502 | MS.gene94824:intron | 30.0% | |
| ATTTACTTTGATCCATTTCG+GGG | + | chr1.4:55967338-55967357 | None:intergenic | 30.0% | |
| CAAATTCAAAGATGGAAAGT+GGG | - | chr1.4:55967546-55967565 | MS.gene94824:intron | 30.0% | |
| CATTCTATCTTTCCATTGTA+TGG | - | chr1.4:55969436-55969455 | MS.gene94824:intron | 30.0% | |
| CATTTACTTTGATCCATTTC+GGG | + | chr1.4:55967339-55967358 | None:intergenic | 30.0% | |
| CCATATCACTTCTTTGATAA+TGG | + | chr1.4:55968560-55968579 | None:intergenic | 30.0% | |
| CCATTATCAAAGAAGTGATA+TGG | - | chr1.4:55968557-55968576 | MS.gene94824:CDS | 30.0% | |
| CCTGATAAAACAAGGAATAA+GGG | + | chr1.4:55966162-55966181 | None:intergenic | 30.0% | |
| CGTAGAAAAACTAAAATGCA+GGG | - | chr1.4:55967990-55968009 | MS.gene94824:CDS | 30.0% | |
| CTCCTTCAATATCTATTAGA+GGG | - | chr1.4:55966214-55966233 | MS.gene94824:intron | 30.0% | |
| CTGATAAAACAAGGAATAAG+GGG | + | chr1.4:55966161-55966180 | None:intergenic | 30.0% | |
| CTGGATAGAAATAGCAAAAA+TGG | - | chr1.4:55969921-55969940 | MS.gene94824:CDS | 30.0% | |
| GAAACTCTAAACAGAATCAA+TGG | + | chr1.4:55967462-55967481 | None:intergenic | 30.0% | |
| GAAATGTCCATGTATTGTTT+AGG | - | chr1.4:55964806-55964825 | MS.gene94824:intron | 30.0% | |
| GGATGATAAAAGTAGTTCAT+AGG | - | chr1.4:55966505-55966524 | MS.gene94824:intron | 30.0% | |
| GTAACTAGATTCAAGATTTC+TGG | - | chr1.4:55967618-55967637 | MS.gene94824:intron | 30.0% | |
| GTAAGGATTGATATCAAAAC+GGG | + | chr1.4:55967890-55967909 | None:intergenic | 30.0% | |
| GTACACACCTTTATATTTGA+AGG | + | chr1.4:55964436-55964455 | None:intergenic | 30.0% | |
| GTTAGTGAAATCTATGACTA+GGG | - | chr1.4:55966693-55966712 | MS.gene94824:CDS | 30.0% | |
| GTTTCTGCAATAGAAAATAG+AGG | - | chr1.4:55965655-55965674 | MS.gene94824:intron | 30.0% | |
| TAACAGAATGTATGTTCATC+AGG | - | chr1.4:55967310-55967329 | MS.gene94824:intron | 30.0% | |
| TACATGAGTGTTCCTATATA+TGG | + | chr1.4:55969357-55969376 | None:intergenic | 30.0% | |
| TATGAAGCTACAAATTCAAG+AGG | + | chr1.4:55968202-55968221 | None:intergenic | 30.0% | |
| TCCAAGTAGCAAATTAACAT+GGG | + | chr1.4:55964365-55964384 | None:intergenic | 30.0% | |
| TGTTAAAGTAATAACTTGGG+CGG | - | chr1.4:55966412-55966431 | MS.gene94824:intron | 30.0% | |
| TTAAACTTATGATGTGCCAA+GGG | + | chr1.4:55967196-55967215 | None:intergenic | 30.0% | |
| TTCCAAGTAGCAAATTAACA+TGG | + | chr1.4:55964366-55964385 | None:intergenic | 30.0% | |
| TTCCCTCTAATAGATATTGA+AGG | + | chr1.4:55966219-55966238 | None:intergenic | 30.0% | |
| TTCTTCAATTCCTCATTCTT+GGG | + | chr1.4:55965277-55965296 | None:intergenic | 30.0% | |
| TTGGATAAAGAGAGCTAAAA+AGG | + | chr1.4:55967919-55967938 | None:intergenic | 30.0% | |
| ! | AAACCAGTGTTGTTAAATAG+AGG | + | chr1.4:55965561-55965580 | None:intergenic | 30.0% |
| ! | AACAAAAGTATGTCTTCTAG+TGG | + | chr1.4:55967435-55967454 | None:intergenic | 30.0% |
| ! | AGAACAAGAATTTTCTGATG+CGG | + | chr1.4:55969580-55969599 | None:intergenic | 30.0% |
| ! | ATGGAAAAAAAAGGTGTAAG+CGG | - | chr1.4:55970087-55970106 | MS.gene94824:CDS | 30.0% |
| ! | CACACTCAATAATCTTTTTC+AGG | - | chr1.4:55964213-55964232 | MS.gene94824:intron | 30.0% |
| ! | CTTATTTGAGCTTTATCTAG+TGG | + | chr1.4:55964680-55964699 | None:intergenic | 30.0% |
| ! | CTTCTTTTTGACAAAAGGAT+CGG | + | chr1.4:55969206-55969225 | None:intergenic | 30.0% |
| ! | CTTTGAACTGTTTTCTTTAG+TGG | - | chr1.4:55965388-55965407 | MS.gene94824:intron | 30.0% |
| ! | GAAAATACGTTTGATAGCTA+AGG | + | chr1.4:55965926-55965945 | None:intergenic | 30.0% |
| ! | GCATATTTTGTGTCAAATGT+TGG | - | chr1.4:55966101-55966120 | MS.gene94824:intron | 30.0% |
| ! | TATATGAAAACATGTCGACT+AGG | - | chr1.4:55964855-55964874 | MS.gene94824:intron | 30.0% |
| ! | TCAGATTTTTACAAGGTTAC+AGG | - | chr1.4:55967778-55967797 | MS.gene94824:intron | 30.0% |
| ! | TTCTCATGTAACTTGTAATG+TGG | - | chr1.4:55965580-55965599 | MS.gene94824:intron | 30.0% |
| ! | TTTGGCAAAATCGTTCATTT+TGG | - | chr1.4:55966079-55966098 | MS.gene94824:intron | 30.0% |
| !! | GCTACTTGGAAATTTTAGAA+GGG | - | chr1.4:55964375-55964394 | MS.gene94824:CDS | 30.0% |
| !! | GGTTTTGTAGAGAAAAACAA+AGG | - | chr1.4:55969736-55969755 | MS.gene94824:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr1.4:55964564-55964583 | MS.gene94824:intron | 30.0% |
| !! | TGCTACTTGGAAATTTTAGA+AGG | - | chr1.4:55964374-55964393 | MS.gene94824:CDS | 30.0% |
| !!! | ATAGCGAGCCATTTTTATTA+TGG | - | chr1.4:55966478-55966497 | MS.gene94824:intron | 30.0% |
| !!! | ATGTTACTTTTGTCTAACAC+AGG | + | chr1.4:55965730-55965749 | None:intergenic | 30.0% |
| !!! | TAGTCCATACTGGTTTTAAA+TGG | - | chr1.4:55964948-55964967 | MS.gene94824:intron | 30.0% |
| AAGGAGAAATCTAGTGAAAG+AGG | + | chr1.4:55967146-55967165 | None:intergenic | 35.0% | |
| AAGGGTGAGAAACAAATCAA+AGG | - | chr1.4:55968291-55968310 | MS.gene94824:intron | 35.0% | |
| AATCTTACCTTCCATTAGTG+GGG | + | chr1.4:55964976-55964995 | None:intergenic | 35.0% | |
| ACAAGAAGCAAACAAACACA+TGG | + | chr1.4:55965115-55965134 | None:intergenic | 35.0% | |
| ACAATGAGGAAAACACCTAT+TGG | - | chr1.4:55966446-55966465 | MS.gene94824:intron | 35.0% | |
| ACTATTGAAACATCAGACCA+AGG | + | chr1.4:55965142-55965161 | None:intergenic | 35.0% | |
| ACTGGAGAATGAAAAACATG+AGG | - | chr1.4:55965324-55965343 | MS.gene94824:intron | 35.0% | |
| AGAATTGGAAATTCCTTCAG+CGG | - | chr1.4:55969761-55969780 | MS.gene94824:intron | 35.0% | |
| AGCACAAGACTATTGTCAAA+TGG | - | chr1.4:55965237-55965256 | MS.gene94824:intron | 35.0% | |
| AGCTCTGTATTATGAATCAG+AGG | + | chr1.4:55969480-55969499 | None:intergenic | 35.0% | |
| AGGGTGAGAAACAAATCAAA+GGG | - | chr1.4:55968292-55968311 | MS.gene94824:intron | 35.0% | |
| ATCCAACGAATTCAACGAAA+AGG | + | chr1.4:55965215-55965234 | None:intergenic | 35.0% | |
| ATTAAGCACTAGCGAAAAGA+CGG | + | chr1.4:55969124-55969143 | None:intergenic | 35.0% | |
| ATTCAACGAAAAGGAAGCTT+TGG | + | chr1.4:55965206-55965225 | None:intergenic | 35.0% | |
| CAATCTTACCTTCCATTAGT+GGG | + | chr1.4:55964977-55964996 | None:intergenic | 35.0% | |
| CAGTCTTAGAGTTATGACTA+TGG | + | chr1.4:55966728-55966747 | None:intergenic | 35.0% | |
| CATTTGATCCGATTAGCAAA+AGG | + | chr1.4:55968589-55968608 | None:intergenic | 35.0% | |
| CGCTATAAATCATCACCAAT+AGG | + | chr1.4:55966464-55966483 | None:intergenic | 35.0% | |
| CTAACCTGCAAAACAAACAT+GGG | + | chr1.4:55969664-55969683 | None:intergenic | 35.0% | |
| CTATGTATCGAGAACTTACT+GGG | - | chr1.4:55965695-55965714 | MS.gene94824:intron | 35.0% | |
| CTTCTTCAATTCCTCATTCT+TGG | + | chr1.4:55965278-55965297 | None:intergenic | 35.0% | |
| CTTTCCCAAAATATGACTCT+TGG | - | chr1.4:55966913-55966932 | MS.gene94824:intron | 35.0% | |
| GAAAATAGAGGCTTGAAGAT+TGG | - | chr1.4:55965667-55965686 | MS.gene94824:intron | 35.0% | |
| GAACATCTTGCAGATATACA+TGG | + | chr1.4:55969605-55969624 | None:intergenic | 35.0% | |
| GCAAATTCAAAGATGGAAAG+TGG | - | chr1.4:55967545-55967564 | MS.gene94824:intron | 35.0% | |
| GCACAAGACTATTGTCAAAT+GGG | - | chr1.4:55965238-55965257 | MS.gene94824:intron | 35.0% | |
| GCAGATTGAAACTAAGATAC+TGG | - | chr1.4:55965306-55965325 | MS.gene94824:intron | 35.0% | |
| GCCTGATAAAACAAGGAATA+AGG | + | chr1.4:55966163-55966182 | None:intergenic | 35.0% | |
| GGTAACCAATATGTGAAGAT+GGG | - | chr1.4:55964241-55964260 | MS.gene94824:intron | 35.0% | |
| GTGTTTGTATGGAAGATCAT+TGG | + | chr1.4:55966790-55966809 | None:intergenic | 35.0% | |
| GTTAAACTTATGATGTGCCA+AGG | + | chr1.4:55967197-55967216 | None:intergenic | 35.0% | |
| GTTCATATAACACATCTCGT+TGG | - | chr1.4:55968142-55968161 | MS.gene94824:intron | 35.0% | |
| GTTGTCCCCTTCAAATATAA+AGG | - | chr1.4:55964426-55964445 | MS.gene94824:CDS | 35.0% | |
| GTTTGCTTCTTGTAATTCCT+TGG | - | chr1.4:55965122-55965141 | MS.gene94824:intron | 35.0% | |
| TAAGTTCTTGTACCAAACAG+TGG | + | chr1.4:55966979-55966998 | None:intergenic | 35.0% | |
| TACTTTATTATGGCCCTGTT+TGG | - | chr1.4:55964453-55964472 | MS.gene94824:CDS | 35.0% | |
| TAGAATGCATAATGCTCTCT+AGG | + | chr1.4:55969423-55969442 | None:intergenic | 35.0% | |
| TATCAAAACGGGAACTAGAA+TGG | + | chr1.4:55967879-55967898 | None:intergenic | 35.0% | |
| TATTATGAATCAGAGGATGC+CGG | + | chr1.4:55969473-55969492 | None:intergenic | 35.0% | |
| TCTAACCTGCAAAACAAACA+TGG | + | chr1.4:55969665-55969684 | None:intergenic | 35.0% | |
| TCTCGTTGGAAAAATAGTCA+TGG | - | chr1.4:55968156-55968175 | MS.gene94824:intron | 35.0% | |
| TCTGCATACAAAAGAAGAAC+AGG | + | chr1.4:55965763-55965782 | None:intergenic | 35.0% | |
| TCTTACCCATCTTCACATAT+TGG | + | chr1.4:55964249-55964268 | None:intergenic | 35.0% | |
| TGCATATCAGAAGGATACAA+CGG | + | chr1.4:55970122-55970141 | None:intergenic | 35.0% | |
| TGCTTATAAGTTCTCCCAAT+TGG | - | chr1.4:55964638-55964657 | MS.gene94824:intron | 35.0% | |
| TTCAAAGGTCTCAAACTCAT+CGG | - | chr1.4:55968474-55968493 | MS.gene94824:CDS | 35.0% | |
| TTGGAAAAATAGTCATGGCA+AGG | - | chr1.4:55968161-55968180 | MS.gene94824:intron | 35.0% | |
| TTGTCAAATGGGTCTTCATT+TGG | - | chr1.4:55965249-55965268 | MS.gene94824:intron | 35.0% | |
| ! | ACCTCCAAGAGTCATATTTT+GGG | + | chr1.4:55966920-55966939 | None:intergenic | 35.0% |
| ! | AGATTCTTTGATAGCAGCAA+TGG | + | chr1.4:55964123-55964142 | None:intergenic | 35.0% |
| ! | AGTTTTTGCTTAGATAGACG+AGG | + | chr1.4:55966196-55966215 | None:intergenic | 35.0% |
| ! | CACCCTTTTTATGTAGTGTT+TGG | + | chr1.4:55968278-55968297 | None:intergenic | 35.0% |
| ! | GTTTTGCAGGTTAGAGTTTT+GGG | - | chr1.4:55969670-55969689 | MS.gene94824:intron | 35.0% |
| ! | TGGAAAAAAAAGGTGTAAGC+GGG | - | chr1.4:55970088-55970107 | MS.gene94824:CDS | 35.0% |
| ! | TGTTTTGCAGGTTAGAGTTT+TGG | - | chr1.4:55969669-55969688 | MS.gene94824:intron | 35.0% |
| ! | TTCCTTTTCGTTGAATTCGT+TGG | - | chr1.4:55965210-55965229 | MS.gene94824:intron | 35.0% |
| !! | ATCACTTCTTTGATAATGGG+AGG | + | chr1.4:55968556-55968575 | None:intergenic | 35.0% |
| !! | ATCTTCAGCTTTAGAACTCA+AGG | - | chr1.4:55964139-55964158 | MS.gene94824:intron | 35.0% |
| !! | CAAGAGTCATATTTTGGGAA+AGG | + | chr1.4:55966915-55966934 | None:intergenic | 35.0% |
| !! | GTTGAGAGCAGTTTTGATAA+TGG | - | chr1.4:55966757-55966776 | MS.gene94824:intron | 35.0% |
| !! | TTTTGGGAATTAAAAGAGCG+TGG | - | chr1.4:55969686-55969705 | MS.gene94824:intron | 35.0% |
| !!! | CCCTTATTCCTTGTTTTATC+AGG | - | chr1.4:55966159-55966178 | MS.gene94824:intron | 35.0% |
| !!! | GGGGATGGTTTTAAAATGTT+AGG | + | chr1.4:55967101-55967120 | None:intergenic | 35.0% |
| !!! | TATTCCCATGTTTGTTTTGC+AGG | - | chr1.4:55969657-55969676 | MS.gene94824:intron | 35.0% |
| !!! | TATTCCTTGTTTTATCAGGC+TGG | - | chr1.4:55966163-55966182 | MS.gene94824:intron | 35.0% |
| !!! | TATTTTGATATGCAGCTTCC+AGG | - | chr1.4:55970028-55970047 | MS.gene94824:intron | 35.0% |
| AAAACAAGGAATAAGGGGTG+AGG | + | chr1.4:55966156-55966175 | None:intergenic | 40.0% | |
| AAAGAAGAACAGGCCAATGA+AGG | + | chr1.4:55965753-55965772 | None:intergenic | 40.0% | |
| AAGGTGAACCGAAAACATGT+CGG | + | chr1.4:55965824-55965843 | None:intergenic | 40.0% | |
| AAGTAATAACTTGGGCGGTA+AGG | - | chr1.4:55966417-55966436 | MS.gene94824:intron | 40.0% | |
| ACCACAAACTGATGTTGAAG+AGG | + | chr1.4:55968632-55968651 | None:intergenic | 40.0% | |
| ACCTCTTCAACATCAGTTTG+TGG | - | chr1.4:55968628-55968647 | MS.gene94824:intron | 40.0% | |
| AGAACCAGCCTGATAAAACA+AGG | + | chr1.4:55966170-55966189 | None:intergenic | 40.0% | |
| AGAATAGATACATCCATGCG+AGG | + | chr1.4:55967685-55967704 | None:intergenic | 40.0% | |
| AGTGGAAAACCATTTCACCT+GGG | + | chr1.4:55967417-55967436 | None:intergenic | 40.0% | |
| AGTTTCTAACGCTATTGCAG+AGG | - | chr1.4:55965351-55965370 | MS.gene94824:intron | 40.0% | |
| ATCAAAACTGCTCTCAACCT+AGG | + | chr1.4:55966755-55966774 | None:intergenic | 40.0% | |
| ATCCCTTCACAGATTGTCTA+TGG | - | chr1.4:55966843-55966862 | MS.gene94824:CDS | 40.0% | |
| ATCGAGAACTTACTGGGTTA+AGG | - | chr1.4:55965701-55965720 | MS.gene94824:intron | 40.0% | |
| ATCTTACCTTCCATTAGTGG+GGG | + | chr1.4:55964975-55964994 | None:intergenic | 40.0% | |
| ATTATGAATCAGAGGATGCC+GGG | + | chr1.4:55969472-55969491 | None:intergenic | 40.0% | |
| ATTGAAAGCCATGAGCACAA+GGG | + | chr1.4:55968812-55968831 | None:intergenic | 40.0% | |
| ATTTGCCTAGCTTAGCATGA+TGG | + | chr1.4:55967122-55967141 | None:intergenic | 40.0% | |
| CAATTGAAATAGCTAGCCAG+AGG | - | chr1.4:55968752-55968771 | MS.gene94824:intron | 40.0% | |
| CACATTCTCCAGTATGTTGT+AGG | + | chr1.4:55969795-55969814 | None:intergenic | 40.0% | |
| CACCATAGACAATCTGTGAA+GGG | + | chr1.4:55966848-55966867 | None:intergenic | 40.0% | |
| CCAATCTTACCTTCCATTAG+TGG | + | chr1.4:55964978-55964997 | None:intergenic | 40.0% | |
| CCACTAATGGAAGGTAAGAT+TGG | - | chr1.4:55964975-55964994 | MS.gene94824:intron | 40.0% | |
| CCAGAAATCAATTGCAACGA+AGG | + | chr1.4:55966344-55966363 | None:intergenic | 40.0% | |
| CCAGATTCTGATGAAGAAGA+TGG | - | chr1.4:55969522-55969541 | MS.gene94824:intron | 40.0% | |
| CCAGTAAGTTCTCGATACAT+AGG | + | chr1.4:55965697-55965716 | None:intergenic | 40.0% | |
| CCATCTTCTTCATCAGAATC+TGG | + | chr1.4:55969525-55969544 | None:intergenic | 40.0% | |
| CCTATGTATCGAGAACTTAC+TGG | - | chr1.4:55965694-55965713 | MS.gene94824:intron | 40.0% | |
| CGGATCAAATGTAACACAGA+TGG | - | chr1.4:55968598-55968617 | MS.gene94824:intron | 40.0% | |
| CGGTAAGGATATAGACAATG+AGG | - | chr1.4:55966432-55966451 | MS.gene94824:intron | 40.0% | |
| CTACAACATACTGGAGAATG+TGG | - | chr1.4:55969793-55969812 | MS.gene94824:CDS | 40.0% | |
| CTCACAAGTGTTTATGACAG+TGG | + | chr1.4:55964765-55964784 | None:intergenic | 40.0% | |
| CTTGCAACTTAAGGAACAAG+TGG | - | chr1.4:55968848-55968867 | MS.gene94824:intron | 40.0% | |
| GAAATCCTCAATGAAGTCAC+TGG | + | chr1.4:55965794-55965813 | None:intergenic | 40.0% | |
| GAAGCTACAAATTCAAGAGG+CGG | + | chr1.4:55968199-55968218 | None:intergenic | 40.0% | |
| GAATTGGAAATTCCTTCAGC+GGG | - | chr1.4:55969762-55969781 | MS.gene94824:intron | 40.0% | |
| GGCTTTCAATGCTAAATCCA+AGG | - | chr1.4:55968822-55968841 | MS.gene94824:intron | 40.0% | |
| GGGTAACCAATATGTGAAGA+TGG | - | chr1.4:55964240-55964259 | MS.gene94824:intron | 40.0% | |
| GTGCCTCTATTTAACAACAC+TGG | - | chr1.4:55965555-55965574 | MS.gene94824:intron | 40.0% | |
| GTTGCTTCCTTTCATACACT+TGG | + | chr1.4:55967577-55967596 | None:intergenic | 40.0% | |
| TAGGCTCTTTCAGAACATCA+TGG | + | chr1.4:55967375-55967394 | None:intergenic | 40.0% | |
| TAGTGGAAAACCATTTCACC+TGG | + | chr1.4:55967418-55967437 | None:intergenic | 40.0% | |
| TATGTCCAGTGACTTCATTG+AGG | - | chr1.4:55965786-55965805 | MS.gene94824:intron | 40.0% | |
| TCAAAACTGCTCTCAACCTA+GGG | + | chr1.4:55966754-55966773 | None:intergenic | 40.0% | |
| TCATTTGGATCCCAAGAATG+AGG | - | chr1.4:55965264-55965283 | MS.gene94824:intron | 40.0% | |
| TCCCAAAATATGACTCTTGG+AGG | - | chr1.4:55966916-55966935 | MS.gene94824:intron | 40.0% | |
| TCTATATCGCTGAGCAATAG+CGG | - | chr1.4:55965499-55965518 | MS.gene94824:intron | 40.0% | |
| TCTTCAACATCAGTTTGTGG+TGG | - | chr1.4:55968631-55968650 | MS.gene94824:intron | 40.0% | |
| TGATCCGATTAGCAAAAGGA+GGG | + | chr1.4:55968585-55968604 | None:intergenic | 40.0% | |
| TGATTGAAGAGCCATTGCAA+TGG | + | chr1.4:55968410-55968429 | None:intergenic | 40.0% | |
| TGCTTTGCAGATAACCTTGA+TGG | - | chr1.4:55968688-55968707 | MS.gene94824:intron | 40.0% | |
| TTCTTGTACCAAACAGTGGT+TGG | + | chr1.4:55966975-55966994 | None:intergenic | 40.0% | |
| TTGATCCGATTAGCAAAAGG+AGG | + | chr1.4:55968586-55968605 | None:intergenic | 40.0% | |
| TTGCAGATAACCTTGATGGA+GGG | - | chr1.4:55968692-55968711 | MS.gene94824:intron | 40.0% | |
| TTGTCAAATAGGGGCTATAG+AGG | + | chr1.4:55965458-55965477 | None:intergenic | 40.0% | |
| TTTAAATGGTCCCCCACTAA+TGG | - | chr1.4:55964962-55964981 | MS.gene94824:intron | 40.0% | |
| TTTGCAGATAACCTTGATGG+AGG | - | chr1.4:55968691-55968710 | MS.gene94824:intron | 40.0% | |
| TTTGCCTAGCTTAGCATGAT+GGG | + | chr1.4:55967121-55967140 | None:intergenic | 40.0% | |
| ! | AAGGTCTGCTTTCTCGTTTT+CGG | + | chr1.4:55964096-55964115 | None:intergenic | 40.0% |
| ! | ATGCCATTGATTGCTACACA+AGG | - | chr1.4:55964281-55964300 | MS.gene94824:intron | 40.0% |
| ! | ATTGGTCTCCTCGGATTATT+CGG | - | chr1.4:55964993-55965012 | MS.gene94824:intron | 40.0% |
| ! | CACTTGTTCCTTAAGTTGCA+AGG | + | chr1.4:55968850-55968869 | None:intergenic | 40.0% |
| ! | CCTTCGTTGCAATTGATTTC+TGG | - | chr1.4:55966341-55966360 | MS.gene94824:intron | 40.0% |
| ! | CTTTTGGCGCAAGATTTACA+AGG | - | chr1.4:55968241-55968260 | MS.gene94824:CDS | 40.0% |
| ! | GACCTCCAAGAGTCATATTT+TGG | + | chr1.4:55966921-55966940 | None:intergenic | 40.0% |
| ! | GCAGATAAGTTAGCTTCCAT+AGG | - | chr1.4:55969011-55969030 | MS.gene94824:CDS | 40.0% |
| ! | GCTTTCTCGTTTTCGGTTAA+AGG | + | chr1.4:55964089-55964108 | None:intergenic | 40.0% |
| ! | GGGACCATTTAAAACCAGTA+TGG | + | chr1.4:55964955-55964974 | None:intergenic | 40.0% |
| ! | GTAACTTGTAATGTGGAGAC+TGG | - | chr1.4:55965587-55965606 | MS.gene94824:intron | 40.0% |
| ! | GTTAGAGTGTTTGAGAAGCT+TGG | - | chr1.4:55969295-55969314 | MS.gene94824:intron | 40.0% |
| ! | TAAAAGAGCGTGGACTTTAC+AGG | - | chr1.4:55969696-55969715 | MS.gene94824:intron | 40.0% |
| ! | TAGTACACGTAGAGCTTGTT+TGG | + | chr1.4:55964708-55964727 | None:intergenic | 40.0% |
| ! | TGATAGCTAAGGGTGTAACA+CGG | + | chr1.4:55965915-55965934 | None:intergenic | 40.0% |
| ! | TGCCATTGATTGCTACACAA+GGG | - | chr1.4:55964282-55964301 | MS.gene94824:intron | 40.0% |
| ! | TTTTCAACATCCCGTGAAAG+CGG | + | chr1.4:55965959-55965978 | None:intergenic | 40.0% |
| !! | GCCCATGTTAATTTGCTACT+TGG | - | chr1.4:55964361-55964380 | MS.gene94824:CDS | 40.0% |
| !! | TCTTTGATAATGGGAGGCTT+TGG | + | chr1.4:55968550-55968569 | None:intergenic | 40.0% |
| !! | TTGTTTTATCAGGCTGGTTC+TGG | - | chr1.4:55966169-55966188 | MS.gene94824:intron | 40.0% |
| !!! | GAGAGCAGTTTTGATAATGG+CGG | - | chr1.4:55966760-55966779 | MS.gene94824:intron | 40.0% |
| AACATACTGGAGAATGTGGC+TGG | - | chr1.4:55969797-55969816 | MS.gene94824:CDS | 45.0% | |
| ACAGATCAGTGTTTCCTCGT+TGG | + | chr1.4:55969875-55969894 | None:intergenic | 45.0% | |
| ACATACTGGAGAATGTGGCT+GGG | - | chr1.4:55969798-55969817 | MS.gene94824:CDS | 45.0% | |
| AGGTTATCTGCAAAGCATGC+CGG | + | chr1.4:55968685-55968704 | None:intergenic | 45.0% | |
| ATGCTCTGCATCCATTGCAA+TGG | - | chr1.4:55968396-55968415 | MS.gene94824:CDS | 45.0% | |
| ATGGCGCTATGGATGGAAAA+GGG | - | chr1.4:55964056-55964075 | MS.gene94824:CDS | 45.0% | |
| CAAAACTGCTCTCAACCTAG+GGG | + | chr1.4:55966753-55966772 | None:intergenic | 45.0% | |
| CAAAAGATCTGTCACTGCGA+AGG | - | chr1.4:55966873-55966892 | MS.gene94824:CDS | 45.0% | |
| CAGGAGGACAATCTGTTGAA+AGG | - | chr1.4:55969715-55969734 | MS.gene94824:intron | 45.0% | |
| CATTGAAAGCCATGAGCACA+AGG | + | chr1.4:55968813-55968832 | None:intergenic | 45.0% | |
| CCACCATAGACAATCTGTGA+AGG | + | chr1.4:55966849-55966868 | None:intergenic | 45.0% | |
| CCTCGGATTATTCGGTCTTT+GGG | - | chr1.4:55965001-55965020 | MS.gene94824:intron | 45.0% | |
| CCTTCACAGATTGTCTATGG+TGG | - | chr1.4:55966846-55966865 | MS.gene94824:CDS | 45.0% | |
| CTTGGACTGCGCTTCTATAA+AGG | - | chr1.4:55964886-55964905 | MS.gene94824:intron | 45.0% | |
| GCTACTAGTGGGGAAGTTAT+TGG | - | chr1.4:55966247-55966266 | MS.gene94824:intron | 45.0% | |
| GCTTCCTTTCATACACTTGG+AGG | + | chr1.4:55967574-55967593 | None:intergenic | 45.0% | |
| GGTATCAAGGTCCCATACAA+TGG | + | chr1.4:55969451-55969470 | None:intergenic | 45.0% | |
| GTTTCCTCGTTGGCATCAAA+GGG | + | chr1.4:55969865-55969884 | None:intergenic | 45.0% | |
| TAACGCTATTGCAGAGGCAA+AGG | - | chr1.4:55965357-55965376 | MS.gene94824:intron | 45.0% | |
| TAGCCCACAGAAATTGGTAC+CGG | + | chr1.4:55964930-55964949 | None:intergenic | 45.0% | |
| TCCATACAAACACGCCATTG+CGG | - | chr1.4:55966797-55966816 | MS.gene94824:intron | 45.0% | |
| TCCTCGGATTATTCGGTCTT+TGG | - | chr1.4:55965000-55965019 | MS.gene94824:intron | 45.0% | |
| TGAAGAGAAAGACGCAGTTG+AGG | - | chr1.4:55966273-55966292 | MS.gene94824:intron | 45.0% | |
| TGATAGCAGCAATGGCTTCA+AGG | + | chr1.4:55964115-55964134 | None:intergenic | 45.0% | |
| TGATTCATCCCTTGTGCTCA+TGG | - | chr1.4:55968801-55968820 | MS.gene94824:intron | 45.0% | |
| TGCCCTTGTGTAGCAATCAA+TGG | + | chr1.4:55964287-55964306 | None:intergenic | 45.0% | |
| TGCGCTTCTATAAAGGTCTC+AGG | - | chr1.4:55964893-55964912 | MS.gene94824:intron | 45.0% | |
| TGTAAACAACACGCAGCTCT+AGG | - | chr1.4:55969892-55969911 | MS.gene94824:CDS | 45.0% | |
| TGTAATCCGCACGTTTAGTG+TGG | + | chr1.4:55968453-55968472 | None:intergenic | 45.0% | |
| TGTTTCCTCGTTGGCATCAA+AGG | + | chr1.4:55969866-55969885 | None:intergenic | 45.0% | |
| TTCATCATTCCTGAGATCCC+AGG | - | chr1.4:55967397-55967416 | MS.gene94824:intron | 45.0% | |
| TTCTCAGAGTTGTGCTGCAT+TGG | + | chr1.4:55967938-55967957 | None:intergenic | 45.0% | |
| TTGAAATAGCTAGCCAGAGG+AGG | - | chr1.4:55968755-55968774 | MS.gene94824:intron | 45.0% | |
| TTGCCTAGCTTAGCATGATG+GGG | + | chr1.4:55967120-55967139 | None:intergenic | 45.0% | |
| TTGTATGGGACCTTGATACC+CGG | - | chr1.4:55969451-55969470 | MS.gene94824:intron | 45.0% | |
| ! | ACGTGCGGATTACACTTCAA+AGG | - | chr1.4:55968459-55968478 | MS.gene94824:CDS | 45.0% |
| ! | CACGTAGAGCTTGTTTGGAT+TGG | + | chr1.4:55964703-55964722 | None:intergenic | 45.0% |
| ! | CTTTATAGAAGCGCAGTCCA+AGG | + | chr1.4:55964888-55964907 | None:intergenic | 45.0% |
| !! | AACTCTAAGACTGATCCCCT+AGG | - | chr1.4:55966735-55966754 | MS.gene94824:intron | 45.0% |
| !! | ATGGACTAGCCCACAGAAAT+TGG | + | chr1.4:55964936-55964955 | None:intergenic | 45.0% |
| !! | GAAGGTAAGATTGGTCTCCT+CGG | - | chr1.4:55964984-55965003 | MS.gene94824:intron | 45.0% |
| !! | TTGATAATGGGAGGCTTTGG+AGG | + | chr1.4:55968547-55968566 | None:intergenic | 45.0% |
| !!! | GCAGTTTTGATAATGGCGGA+AGG | - | chr1.4:55966764-55966783 | MS.gene94824:intron | 45.0% |
| !! | TAATTTATCTTAAATTTAAA+AGG | + | chr1.4:55966627-55966646 | None:intergenic | 5.0% |
| AAAGGTTTCTCCACCTCCTC+TGG | + | chr1.4:55968771-55968790 | None:intergenic | 50.0% | |
| AAATAGCTAGCCAGAGGAGG+TGG | - | chr1.4:55968758-55968777 | MS.gene94824:intron | 50.0% | |
| AACTGCAGCAGCTACTAGTG+GGG | - | chr1.4:55966237-55966256 | MS.gene94824:intron | 50.0% | |
| AAGATCTGTCACTGCGAAGG+TGG | - | chr1.4:55966876-55966895 | MS.gene94824:CDS | 50.0% | |
| AATGGTCCCCCACTAATGGA+AGG | - | chr1.4:55964966-55964985 | MS.gene94824:intron | 50.0% | |
| ACAAGGAATAAGGGGTGAGG+TGG | + | chr1.4:55966153-55966172 | None:intergenic | 50.0% | |
| ACAGTGGAATAGTGGTTGGC+CGG | + | chr1.4:55966950-55966969 | None:intergenic | 50.0% | |
| ACCATTTCACCTGGGATCTC+AGG | + | chr1.4:55967409-55967428 | None:intergenic | 50.0% | |
| ACTCTTGGAGGTCATGTGAC+CGG | - | chr1.4:55966928-55966947 | MS.gene94824:intron | 50.0% | |
| ACTTGGGACACACACAGACA+AGG | - | chr1.4:55967844-55967863 | MS.gene94824:intron | 50.0% | |
| AGAATTGGAGGAACCTCGCA+TGG | - | chr1.4:55967669-55967688 | MS.gene94824:intron | 50.0% | |
| AGAGGAGGTGGAGAAACCTT+TGG | - | chr1.4:55968770-55968789 | MS.gene94824:intron | 50.0% | |
| AGCCCACAGAAATTGGTACC+GGG | + | chr1.4:55964929-55964948 | None:intergenic | 50.0% | |
| ATACTGGAGAATGTGGCTGG+GGG | - | chr1.4:55969800-55969819 | MS.gene94824:CDS | 50.0% | |
| ATGGAATTACCTGATCGGCC+TGG | + | chr1.4:55970049-55970068 | None:intergenic | 50.0% | |
| CAAGGAATAAGGGGTGAGGT+GGG | + | chr1.4:55966152-55966171 | None:intergenic | 50.0% | |
| CACTGTGACCAACCACTGTT+TGG | - | chr1.4:55966964-55966983 | MS.gene94824:intron | 50.0% | |
| CATACTGGAGAATGTGGCTG+GGG | - | chr1.4:55969799-55969818 | MS.gene94824:CDS | 50.0% | |
| CATCCCCATCATGCTAAGCT+AGG | - | chr1.4:55967114-55967133 | MS.gene94824:intron | 50.0% | |
| CCCAAAGACCGAATAATCCG+AGG | + | chr1.4:55965004-55965023 | None:intergenic | 50.0% | |
| CTCCCGGTACCAATTTCTGT+GGG | - | chr1.4:55964924-55964943 | MS.gene94824:intron | 50.0% | |
| CTTGGGACACACACAGACAA+GGG | - | chr1.4:55967845-55967864 | MS.gene94824:intron | 50.0% | |
| GAACTGCAGCAGCTACTAGT+GGG | - | chr1.4:55966236-55966255 | MS.gene94824:intron | 50.0% | |
| GACACGAGCCTACAACATAC+TGG | - | chr1.4:55969784-55969803 | MS.gene94824:CDS | 50.0% | |
| GAGGTGGGAAATTGCTTTGG+AGG | + | chr1.4:55966137-55966156 | None:intergenic | 50.0% | |
| GAGTGTCCACACTAAACGTG+CGG | - | chr1.4:55968444-55968463 | MS.gene94824:CDS | 50.0% | |
| GATCTTCTTCGTCACCATCG+TGG | + | chr1.4:55969548-55969567 | None:intergenic | 50.0% | |
| GATGAAGAAGATGGCCACGA+TGG | - | chr1.4:55969531-55969550 | MS.gene94824:intron | 50.0% | |
| GGCTCCTCCAAGTGTATGAA+AGG | - | chr1.4:55967567-55967586 | MS.gene94824:intron | 50.0% | |
| GGTCACAGTGGAATAGTGGT+TGG | + | chr1.4:55966954-55966973 | None:intergenic | 50.0% | |
| GGTGAGGTGGGAAATTGCTT+TGG | + | chr1.4:55966140-55966159 | None:intergenic | 50.0% | |
| GTCTCAGGTTTGAATCCTCC+CGG | - | chr1.4:55964908-55964927 | MS.gene94824:intron | 50.0% | |
| TCCTGAGATCCCAGGTGAAA+TGG | - | chr1.4:55967405-55967424 | MS.gene94824:intron | 50.0% | |
| TGTGGCTGCTGCATATCAGA+AGG | + | chr1.4:55970131-55970150 | None:intergenic | 50.0% | |
| ! | AAGAGCGTGGACTTTACAGG+AGG | - | chr1.4:55969699-55969718 | MS.gene94824:intron | 50.0% |
| ! | AGAAGATCAGCCGCTTTCAC+GGG | - | chr1.4:55965946-55965965 | MS.gene94824:intron | 50.0% |
| ! | CAAACAGTGGTTGGTCACAG+TGG | + | chr1.4:55966966-55966985 | None:intergenic | 50.0% |
| ! | CAGAAGATCAGCCGCTTTCA+CGG | - | chr1.4:55965945-55965964 | MS.gene94824:intron | 50.0% |
| ! | CCAAGGTGCCTTGCAACTTA+AGG | - | chr1.4:55968839-55968858 | MS.gene94824:intron | 50.0% |
| ! | CCTTAAGTTGCAAGGCACCT+TGG | + | chr1.4:55968842-55968861 | None:intergenic | 50.0% |
| ! | CTAGCTTAGCATGATGGGGA+TGG | + | chr1.4:55967116-55967135 | None:intergenic | 50.0% |
| ! | CTGCGAGACCGACATGTTTT+CGG | - | chr1.4:55965813-55965832 | MS.gene94824:intron | 50.0% |
| ! | GGAGCCCTCCTTTTGCTAAT+CGG | - | chr1.4:55968578-55968597 | MS.gene94824:intron | 50.0% |
| ! | GGTTGGTCACAGTGGAATAG+TGG | + | chr1.4:55966958-55966977 | None:intergenic | 50.0% |
| !! | TGGATTGAAGGGTGCTCTTG+TGG | + | chr1.4:55970149-55970168 | None:intergenic | 50.0% |
| !! | TTCTGTGGGCTAGTCCATAC+TGG | - | chr1.4:55964938-55964957 | MS.gene94824:intron | 50.0% |
| AAACACGCCATTGCGGCCTA+TGG | - | chr1.4:55966804-55966823 | MS.gene94824:intron | 55.0% | |
| AAGGGCCCTGTCTTCAAACC+TGG | + | chr1.4:55969847-55969866 | None:intergenic | 55.0% | |
| AGGGCCCTGTCTTCAAACCT+GGG | + | chr1.4:55969846-55969865 | None:intergenic | 55.0% | |
| CCTCCCGGTACCAATTTCTG+TGG | - | chr1.4:55964923-55964942 | MS.gene94824:intron | 55.0% | |
| GAAAGGCAGACCCTCCATCA+AGG | + | chr1.4:55968705-55968724 | None:intergenic | 55.0% | |
| GCCGCAATGGCGTGTTTGTA+TGG | + | chr1.4:55966801-55966820 | None:intergenic | 55.0% | |
| GGAACTGCAGCAGCTACTAG+TGG | - | chr1.4:55966235-55966254 | MS.gene94824:intron | 55.0% | |
| GTCGACTAGGCTTGAGACCT+TGG | - | chr1.4:55964868-55964887 | MS.gene94824:intron | 55.0% | |
| GTTCATCAGGCTCCCCGAAA+TGG | - | chr1.4:55967323-55967342 | MS.gene94824:intron | 55.0% | |
| TCAGAGGATGCCGGGTATCA+AGG | + | chr1.4:55969464-55969483 | None:intergenic | 55.0% | |
| TCCGCCCAGGTTTGAAGACA+GGG | - | chr1.4:55969839-55969858 | MS.gene94824:CDS | 55.0% | |
| ! | CCACAGAAATTGGTACCGGG+AGG | + | chr1.4:55964926-55964945 | None:intergenic | 55.0% |
| !! | ACGCAGCTCTAGGAAATCGC+TGG | - | chr1.4:55969902-55969921 | MS.gene94824:CDS | 55.0% |
| AGGGCCCTTTGATGCCAACG+AGG | - | chr1.4:55969858-55969877 | MS.gene94824:CDS | 60.0% | |
| ATGCAGCTTCCAGGCCGATC+AGG | - | chr1.4:55970037-55970056 | MS.gene94824:intron | 60.0% | |
| CTCCGCCCAGGTTTGAAGAC+AGG | - | chr1.4:55969838-55969857 | MS.gene94824:CDS | 60.0% | |
| GCCCTGTCTTCAAACCTGGG+CGG | + | chr1.4:55969843-55969862 | None:intergenic | 60.0% | |
| TGGCACGATTATCTCCGCCC+AGG | - | chr1.4:55969826-55969845 | MS.gene94824:CDS | 60.0% | |
| ! | GAGGCGCTACTGAGGCATAG+TGG | + | chr1.4:55965439-55965458 | None:intergenic | 60.0% |
| !! | GGGCTATAGAGGCGCTACTG+AGG | + | chr1.4:55965447-55965466 | None:intergenic | 60.0% |
| CTGTGAAGGGATGCCCGCCA+TGG | + | chr1.4:55966835-55966854 | None:intergenic | 65.0% | |
| GTAGGCTCGTGTCCCGCTGA+AGG | + | chr1.4:55969777-55969796 | None:intergenic | 65.0% | |
| TGAAGGGATGCCCGCCATGG+CGG | + | chr1.4:55966832-55966851 | None:intergenic | 65.0% | |
| ! | GAGAATGTGGCTGGGGGCGT+TGG | - | chr1.4:55969806-55969825 | MS.gene94824:CDS | 65.0% |
| GGCGGCACCATAGGCCGCAA+TGG | + | chr1.4:55966814-55966833 | None:intergenic | 70.0% | |
| !! | GCCTATGGTGCCGCCATGGC+GGG | - | chr1.4:55966819-55966838 | MS.gene94824:CDS | 70.0% |
| !! | GGCCTATGGTGCCGCCATGG+CGG | - | chr1.4:55966818-55966837 | MS.gene94824:CDS | 70.0% |
| !! | TGCGGCCTATGGTGCCGCCA+TGG | - | chr1.4:55966815-55966834 | MS.gene94824:CDS | 70.0% |
| GCCCGCCATGGCGGCACCAT+AGG | + | chr1.4:55966823-55966842 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 55964056 | 55970171 | 55964056 | ID=MS.gene94824 |
| chr1.4 | mRNA | 55964056 | 55970171 | 55964056 | ID=MS.gene94824.t1;Parent=MS.gene94824 |
| chr1.4 | exon | 55970067 | 55970171 | 55970067 | ID=MS.gene94824.t1.exon1;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55970067 | 55970171 | 55970067 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55969780 | 55969992 | 55969780 | ID=MS.gene94824.t1.exon2;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55969780 | 55969992 | 55969780 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55968849 | 55969040 | 55968849 | ID=MS.gene94824.t1.exon3;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55968849 | 55969040 | 55968849 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55968354 | 55968578 | 55968354 | ID=MS.gene94824.t1.exon4;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55968354 | 55968578 | 55968354 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55968212 | 55968298 | 55968212 | ID=MS.gene94824.t1.exon5;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55968212 | 55968298 | 55968212 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55967914 | 55968046 | 55967914 | ID=MS.gene94824.t1.exon6;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55967914 | 55968046 | 55967914 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55966809 | 55966895 | 55966809 | ID=MS.gene94824.t1.exon7;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55966809 | 55966895 | 55966809 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55966648 | 55966718 | 55966648 | ID=MS.gene94824.t1.exon8;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55966648 | 55966718 | 55966648 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55964285 | 55964548 | 55964285 | ID=MS.gene94824.t1.exon9;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55964285 | 55964548 | 55964285 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55964169 | 55964184 | 55964169 | ID=MS.gene94824.t1.exon10;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55964169 | 55964184 | 55964169 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| chr1.4 | exon | 55964056 | 55964084 | 55964056 | ID=MS.gene94824.t1.exon11;Parent=MS.gene94824.t1 |
| chr1.4 | CDS | 55964056 | 55964084 | 55964056 | ID=cds.MS.gene94824.t1;Parent=MS.gene94824.t1 |
| Gene Sequence |
| Protein sequence |
