Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94918.t1 | KEH34032.1 | 96 | 670 | 19 | 2 | 1 | 670 | 1 | 662 | 0.00E+00 | 1280.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94918.t1 | Q500V5 | 28.5 | 239 | 133 | 9 | 396 | 623 | 227 | 438 | 1.9e-15 | 85.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94918.t1 | A0A072UWP7 | 96.0 | 670 | 19 | 2 | 1 | 670 | 1 | 662 | 0.0e+00 | 1280.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050085 | MS.gene94918 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene94918 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene94918 | 0.814261 | 1.69E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene94918 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene050654 | MS.gene94918 | 0.805392 | 1.36E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene94918 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene94918 | 0.808155 | 3.56E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene94918 | 0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene051381 | MS.gene94918 | 0.848491 | 5.93E-60 | -1.69E-46 |
| MS.gene051382 | MS.gene94918 | 0.814338 | 1.62E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene94918 | 0.820393 | 7.02E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene94918 | 0.83393 | 4.02E-56 | -1.69E-46 |
| MS.gene052932 | MS.gene94918 | 0.815865 | 7.42E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene94918 | 0.808111 | 3.64E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene94918 | 0.836405 | 9.54E-57 | -1.69E-46 |
| MS.gene055313 | MS.gene94918 | 0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene055314 | MS.gene94918 | 0.84393 | 1.04E-58 | -1.69E-46 |
| MS.gene056045 | MS.gene94918 | 0.823284 | 1.50E-53 | -1.69E-46 |
| MS.gene056097 | MS.gene94918 | 0.823585 | 1.28E-53 | -1.69E-46 |
| MS.gene056181 | MS.gene94918 | 0.837269 | 5.74E-57 | -1.69E-46 |
| MS.gene056578 | MS.gene94918 | 0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene94918 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene94918 | 0.803992 | 2.67E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene94918 | 0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene94918 | 0.811597 | 6.47E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene94918 | 0.806763 | 7.03E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene94918 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene94918 | 0.803457 | 3.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94918.t1 | MTR_3g058500 | 95.672 | 670 | 21 | 2 | 1 | 670 | 1 | 662 | 0.0 | 1323 |
| MS.gene94918.t1 | MTR_2g026390 | 46.435 | 547 | 276 | 10 | 5 | 544 | 7 | 543 | 1.26e-155 | 466 |
| MS.gene94918.t1 | MTR_5g055210 | 34.813 | 563 | 313 | 13 | 8 | 552 | 23 | 549 | 2.13e-95 | 309 |
| MS.gene94918.t1 | MTR_5g055210 | 34.713 | 435 | 249 | 8 | 136 | 552 | 27 | 444 | 1.03e-75 | 254 |
| MS.gene94918.t1 | MTR_5g055210 | 33.159 | 383 | 221 | 8 | 188 | 552 | 1 | 366 | 1.63e-56 | 200 |
| MS.gene94918.t1 | MTR_3g462210 | 82.979 | 47 | 8 | 0 | 50 | 96 | 1 | 47 | 3.05e-20 | 85.9 |
| MS.gene94918.t1 | MTR_3g464550 | 31.690 | 142 | 91 | 4 | 391 | 530 | 15 | 152 | 1.05e-14 | 78.6 |
| MS.gene94918.t1 | MTR_4g079830 | 29.801 | 151 | 86 | 3 | 390 | 536 | 10 | 144 | 7.22e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94918.t1 | AT5G55600 | 47.590 | 664 | 296 | 11 | 1 | 648 | 1 | 628 | 0.0 | 569 |
| MS.gene94918.t1 | AT5G55600 | 47.590 | 664 | 296 | 11 | 1 | 648 | 1 | 628 | 0.0 | 569 |
| MS.gene94918.t1 | AT5G55600 | 47.590 | 664 | 296 | 11 | 1 | 648 | 1 | 628 | 0.0 | 569 |
| MS.gene94918.t1 | AT1G68580 | 30.573 | 314 | 168 | 8 | 8 | 305 | 10 | 289 | 5.82e-36 | 142 |
| MS.gene94918.t1 | AT1G68580 | 43.590 | 156 | 82 | 4 | 396 | 547 | 369 | 522 | 1.23e-34 | 139 |
| MS.gene94918.t1 | AT1G68580 | 31.353 | 303 | 180 | 8 | 8 | 305 | 10 | 289 | 1.05e-35 | 143 |
| MS.gene94918.t1 | AT1G68580 | 42.767 | 159 | 85 | 4 | 396 | 550 | 369 | 525 | 2.10e-35 | 142 |
| MS.gene94918.t1 | AT1G68580 | 42.767 | 159 | 85 | 4 | 396 | 550 | 273 | 429 | 1.50e-35 | 142 |
| MS.gene94918.t1 | AT1G68580 | 38.554 | 166 | 98 | 3 | 141 | 305 | 31 | 193 | 2.92e-32 | 132 |
| MS.gene94918.t1 | AT1G68580 | 42.767 | 159 | 85 | 4 | 396 | 550 | 323 | 479 | 2.70e-35 | 142 |
| MS.gene94918.t1 | AT1G68580 | 38.554 | 166 | 98 | 3 | 141 | 305 | 81 | 243 | 4.23e-32 | 132 |
| MS.gene94918.t1 | AT1G68580 | 43.590 | 156 | 82 | 4 | 396 | 547 | 273 | 426 | 5.34e-35 | 138 |
| MS.gene94918.t1 | AT1G68580 | 38.554 | 166 | 98 | 3 | 141 | 305 | 31 | 193 | 5.58e-33 | 132 |
| MS.gene94918.t1 | AT1G26540 | 36.242 | 149 | 67 | 7 | 396 | 536 | 14 | 142 | 1.50e-15 | 80.9 |
| MS.gene94918.t1 | AT5G58610 | 32.624 | 141 | 90 | 4 | 394 | 530 | 30 | 169 | 2.80e-15 | 80.5 |
| MS.gene94918.t1 | AT1G09320 | 28.870 | 239 | 132 | 9 | 396 | 623 | 227 | 438 | 2.83e-15 | 79.7 |
| MS.gene94918.t1 | AT5G58610 | 32.624 | 141 | 90 | 4 | 394 | 530 | 30 | 169 | 3.00e-15 | 80.5 |
| MS.gene94918.t1 | AT5G58610 | 32.624 | 141 | 90 | 4 | 394 | 530 | 30 | 169 | 3.49e-15 | 80.1 |
| MS.gene94918.t1 | AT5G58610 | 32.624 | 141 | 90 | 4 | 394 | 530 | 30 | 169 | 3.49e-15 | 80.1 |
| MS.gene94918.t1 | AT5G58610 | 30.827 | 133 | 87 | 4 | 402 | 530 | 29 | 160 | 2.66e-13 | 73.9 |
| MS.gene94918.t1 | AT5G58610 | 30.827 | 133 | 87 | 4 | 402 | 530 | 29 | 160 | 2.81e-13 | 73.9 |
| MS.gene94918.t1 | AT5G58610 | 30.827 | 133 | 87 | 4 | 402 | 530 | 29 | 160 | 2.85e-13 | 73.9 |
| MS.gene94918.t1 | AT5G58610 | 30.827 | 133 | 87 | 4 | 402 | 530 | 29 | 160 | 2.91e-13 | 73.9 |
| MS.gene94918.t1 | AT5G58610 | 30.827 | 133 | 87 | 4 | 402 | 530 | 29 | 160 | 3.03e-13 | 73.9 |
| MS.gene94918.t1 | AT5G58610 | 30.827 | 133 | 87 | 4 | 402 | 530 | 29 | 160 | 3.23e-13 | 73.9 |
| MS.gene94918.t1 | AT4G17330 | 29.167 | 168 | 106 | 5 | 380 | 536 | 1559 | 1724 | 5.10e-13 | 73.6 |
| MS.gene94918.t1 | AT4G17330 | 29.167 | 168 | 106 | 5 | 380 | 536 | 1559 | 1724 | 5.10e-13 | 73.6 |
| MS.gene94918.t1 | AT4G17330 | 29.167 | 168 | 106 | 5 | 380 | 536 | 1524 | 1689 | 5.73e-13 | 73.2 |
Find 175 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCATTATGTTGCTTATT+TGG | 0.118537 | 3.1:+43750173 | MS.gene94918:CDS |
| CCTCACTTTGTCTCCATCTT+TGG | 0.174164 | 3.1:+43753307 | MS.gene94918:CDS |
| TATTGTGGTGTTACTGAAAA+TGG | 0.179192 | 3.1:+43753425 | MS.gene94918:CDS |
| TGCAGAAATGGGATCCAAAT+TGG | 0.187564 | 3.1:+43750001 | MS.gene94918:CDS |
| GAGATTGCTTTCTCTGAAAA+AGG | 0.226490 | 3.1:+43750755 | MS.gene94918:CDS |
| GGAGTGATGGGTGGTGGGAG+GGG | 0.230468 | 3.1:+43752764 | MS.gene94918:CDS |
| AGTATGGCCTGCTCATAATT+TGG | 0.230479 | 3.1:+43749716 | MS.gene94918:intron |
| GATAATTTGGAGTTACTCTT+TGG | 0.247547 | 3.1:-43749908 | None:intergenic |
| GATGTCTGAATTGGATAATT+TGG | 0.248357 | 3.1:-43749921 | None:intergenic |
| GAGTGATGGGTGGTGGGAGG+GGG | 0.251158 | 3.1:+43752765 | MS.gene94918:CDS |
| AAGGGCTTCTTACCCCAATT+TGG | 0.253554 | 3.1:-43750015 | None:intergenic |
| TGTCTCATCTCAAGTTTATC+AGG | 0.263134 | 3.1:-43752655 | None:intergenic |
| AATTTACAACTTGGAAAGTT+TGG | 0.277901 | 3.1:-43750716 | None:intergenic |
| AATATAGTTGGGGTTATATC+AGG | 0.280263 | 3.1:-43753260 | None:intergenic |
| CTGTGCTTTAGGCAATTAAA+AGG | 0.291113 | 3.1:+43750435 | MS.gene94918:CDS |
| AATGTTCAAGTTTACTTTCC+TGG | 0.293141 | 3.1:+43752820 | MS.gene94918:CDS |
| CTGAAGGAGGTTTATCATCT+TGG | 0.301328 | 3.1:-43753457 | None:intergenic |
| TGTTATTGCAGAGGAGTTCT+TGG | 0.306744 | 3.1:+43749043 | MS.gene94918:CDS |
| AGTTTCTCTTCAACAATATC+AGG | 0.307576 | 3.1:-43753398 | None:intergenic |
| GTGGAGTGATGGGTGGTGGG+AGG | 0.316668 | 3.1:+43752762 | MS.gene94918:CDS |
| CATGGTGGAGTGATGGGTGG+TGG | 0.333280 | 3.1:+43752758 | MS.gene94918:CDS |
| GTATCCGAGGCTGCTGGTTC+AGG | 0.342948 | 3.1:+43750850 | MS.gene94918:CDS |
| CATCTTGAACATCATCATAT+TGG | 0.348306 | 3.1:-43750911 | None:intergenic |
| CACAGGAGAAGATGAAGATT+TGG | 0.355505 | 3.1:+43750572 | MS.gene94918:CDS |
| TGGAGTGATGGGTGGTGGGA+GGG | 0.358047 | 3.1:+43752763 | MS.gene94918:CDS |
| CTAATATCAGTTAATATAGT+TGG | 0.361422 | 3.1:-43753272 | None:intergenic |
| GCAGAAATGGGATCCAAATT+GGG | 0.363178 | 3.1:+43750002 | MS.gene94918:CDS |
| AAAGTTTGGTATCCCATCAT+TGG | 0.367954 | 3.1:-43750702 | None:intergenic |
| ACAGAATACATCTGTGCTTT+AGG | 0.372094 | 3.1:+43750424 | MS.gene94918:CDS |
| TATCCAATTCAGACATCGTT+TGG | 0.378163 | 3.1:+43749927 | MS.gene94918:CDS |
| TATAGTTCACTATTACCTTA+AGG | 0.379420 | 3.1:+43748956 | MS.gene94918:CDS |
| TGACCAAACGATGTCTGAAT+TGG | 0.380608 | 3.1:-43749930 | None:intergenic |
| TAATATCAGTTAATATAGTT+GGG | 0.382595 | 3.1:-43753271 | None:intergenic |
| ATTGTGGTGTTACTGAAAAT+GGG | 0.383755 | 3.1:+43753426 | MS.gene94918:CDS |
| AAGGGGTTAGGAAGTTGATT+AGG | 0.389626 | 3.1:+43750673 | MS.gene94918:CDS |
| CGGCACGTGGGTTAATATAA+AGG | 0.391397 | 3.1:+43753232 | MS.gene94918:CDS |
| CGCAGTTTGCTTAAGTCAAA+GGG | 0.405480 | 3.1:-43750471 | None:intergenic |
| CCTCCAAATAAGCAACATAA+TGG | 0.410956 | 3.1:-43750176 | None:intergenic |
| GAGTCGTTTCTTGCAGTTGT+TGG | 0.417788 | 3.1:+43748990 | MS.gene94918:CDS |
| GAGGAGTTCTTGGAAATTTG+TGG | 0.418318 | 3.1:+43749053 | MS.gene94918:CDS |
| CTAACGGTCGAGAAGGGGTT+AGG | 0.422030 | 3.1:+43750661 | MS.gene94918:CDS |
| ACTTAAGAATATCTAGAGAT+TGG | 0.424417 | 3.1:+43753204 | MS.gene94918:CDS |
| GTGTAAAAGTGTAGAACTAA+TGG | 0.424590 | 3.1:+43753613 | MS.gene94918:CDS |
| CACCCTTGACTTCCTGATTG+TGG | 0.427838 | 3.1:-43750251 | None:intergenic |
| TGTTCTTCAAGAGGTGGAGC+TGG | 0.438624 | 3.1:-43752700 | None:intergenic |
| AACCTGGCCGGTCGACCATC+AGG | 0.441895 | 3.1:+43752677 | MS.gene94918:CDS |
| GCCTTGCATAATTTACAACT+TGG | 0.442585 | 3.1:-43750725 | None:intergenic |
| CATCTCAAGTTTATCAGGCT+TGG | 0.443426 | 3.1:-43752650 | None:intergenic |
| GTTCTTGGAAATTTGTGGAA+TGG | 0.443777 | 3.1:+43749058 | MS.gene94918:CDS |
| ATCAGTGCAGAGTGTGTTGA+TGG | 0.446027 | 3.1:+43750333 | MS.gene94918:CDS |
| ACTCCCCAGCAGAATCCTTA+AGG | 0.447365 | 3.1:-43748971 | None:intergenic |
| GAAGATGAAGATTTGGATGT+TGG | 0.448739 | 3.1:+43750579 | MS.gene94918:CDS |
| CTAGAAGAGAGGTGGTTGAT+TGG | 0.452451 | 3.1:+43749108 | MS.gene94918:CDS |
| AAATTCCACCTGGTTTCAAA+TGG | 0.455217 | 3.1:+43749081 | MS.gene94918:CDS |
| CATCTTCAATATCACCAACT+TGG | 0.455980 | 3.1:-43753490 | None:intergenic |
| TGCTGAGAGACTCGGGGTTG+TGG | 0.458899 | 3.1:-43750542 | None:intergenic |
| CTTAGCACTTCTACTCCTCT+TGG | 0.464617 | 3.1:-43750622 | None:intergenic |
| ATGGTGGAGTGATGGGTGGT+GGG | 0.468229 | 3.1:+43752759 | MS.gene94918:CDS |
| GGCCTGATGGTCGACCGGCC+AGG | 0.474559 | 3.1:-43752679 | None:intergenic |
| AATTCAGACATCGTTTGGTC+AGG | 0.475598 | 3.1:+43749932 | MS.gene94918:CDS |
| TGGAGGATATGTATGAAGAT+AGG | 0.478711 | 3.1:+43750193 | MS.gene94918:CDS |
| GAGGCTGTTGCTGAGAGACT+CGG | 0.480968 | 3.1:-43750550 | None:intergenic |
| CGTGGATGAGTATTTCGTAC+TGG | 0.483597 | 3.1:-43750279 | None:intergenic |
| TATTACCTTAAGGATTCTGC+TGG | 0.485228 | 3.1:+43748966 | MS.gene94918:CDS |
| ATAGCGATGCAAAGGTGATT+CGG | 0.485856 | 3.1:+43753576 | MS.gene94918:CDS |
| AGGCTGTTGCTGAGAGACTC+GGG | 0.485900 | 3.1:-43750549 | None:intergenic |
| CAAGAGGAGTAGAAGTGCTA+AGG | 0.492686 | 3.1:+43750623 | MS.gene94918:CDS |
| GGCTTGGCCAACTTAAAAGC+AGG | 0.493219 | 3.1:-43752634 | None:intergenic |
| ACGCAGTTTGCTTAAGTCAA+AGG | 0.494480 | 3.1:-43750472 | None:intergenic |
| CTTGTCATCAACCTTGTATG+TGG | 0.496161 | 3.1:-43750802 | None:intergenic |
| AGAGAAAGCAATCTCCTATC+CGG | 0.497849 | 3.1:-43750747 | None:intergenic |
| GTCGATGCATGGTGGAGTGA+TGG | 0.498558 | 3.1:+43752751 | MS.gene94918:CDS |
| AAGGTGGTTTCACCACAATC+AGG | 0.498870 | 3.1:+43750239 | MS.gene94918:CDS |
| CTAGCTCATAAGATCGCAAA+TGG | 0.499196 | 3.1:+43749741 | MS.gene94918:CDS |
| CCATTATGTTGCTTATTTGG+AGG | 0.499705 | 3.1:+43750176 | MS.gene94918:CDS |
| GATTAGGAGTAATCCAATGA+TGG | 0.500360 | 3.1:+43750689 | MS.gene94918:CDS |
| CAAGAGTTGATTGCCGAGGT+TGG | 0.506135 | 3.1:+43752721 | MS.gene94918:CDS |
| GGTTTATTAGACTTCTCAGC+AGG | 0.507837 | 3.1:-43753377 | None:intergenic |
| TCTCTCAGCAACAGCCTCAC+AGG | 0.508253 | 3.1:+43750555 | MS.gene94918:CDS |
| AGTCTTCTAACGGTCGAGAA+GGG | 0.510609 | 3.1:+43750655 | MS.gene94918:CDS |
| TTGGAACCGCCGTCGATGCA+TGG | 0.511987 | 3.1:+43752740 | MS.gene94918:CDS |
| AACTCTTGTTCTTCAAGAGG+TGG | 0.514625 | 3.1:-43752706 | None:intergenic |
| CTAGATCTCCATTTGAAACC+AGG | 0.519075 | 3.1:-43749089 | None:intergenic |
| TAAATTATGCAAGGCCGGAT+AGG | 0.519189 | 3.1:+43750733 | MS.gene94918:CDS |
| TTGGTTTGATCCCACATACA+AGG | 0.520051 | 3.1:+43750791 | MS.gene94918:CDS |
| GACCTGCCGCAGTCTTAACT+CGG | 0.521481 | 3.1:+43750355 | MS.gene94918:CDS |
| TACACCTGAACCAGCAGCCT+CGG | 0.528435 | 3.1:-43750854 | None:intergenic |
| GAGCTGGCCTGATGGTCGAC+CGG | 0.528619 | 3.1:-43752684 | None:intergenic |
| TCCCGAGTTAAGACTGCGGC+AGG | 0.529171 | 3.1:-43750357 | None:intergenic |
| GCAAATGACAGTACATAAGA+AGG | 0.532487 | 3.1:+43753181 | MS.gene94918:CDS |
| ATGTATTCTGTCTGTTGAAG+AGG | 0.534662 | 3.1:-43750412 | None:intergenic |
| AAAAGGTTGATTGTCAACCT+TGG | 0.536017 | 3.1:+43750772 | MS.gene94918:CDS |
| GAGATTGGTTAGGCGGCACG+TGG | 0.538949 | 3.1:+43753219 | MS.gene94918:CDS |
| TCGATGCATGGTGGAGTGAT+GGG | 0.539124 | 3.1:+43752752 | MS.gene94918:CDS |
| ATCGACGGCGGTTCCAACCT+CGG | 0.539976 | 3.1:-43752734 | None:intergenic |
| TCCAAGTTGTAAATTATGCA+AGG | 0.541812 | 3.1:+43750724 | MS.gene94918:CDS |
| GTTCAAGATGAAGATGGAAG+TGG | 0.543374 | 3.1:+43750924 | MS.gene94918:CDS |
| GGATATGTATGAAGATAGGA+GGG | 0.543811 | 3.1:+43750197 | MS.gene94918:CDS |
| AGAAGTTAGTGCACGAATGG+TGG | 0.544357 | 3.1:+43749773 | MS.gene94918:CDS |
| TGTATTCTGTCTGTTGAAGA+GGG | 0.546274 | 3.1:-43750411 | None:intergenic |
| GATGATGTTCAAGATGAAGA+TGG | 0.547654 | 3.1:+43750918 | MS.gene94918:CDS |
| ATCTTCAATATCACCAACTT+GGG | 0.547805 | 3.1:-43753489 | None:intergenic |
| GTTCAGGTGTACAATTGTAC+AGG | 0.551822 | 3.1:+43750866 | MS.gene94918:CDS |
| AAGAGGAGTAGAAGTGCTAA+GGG | 0.554787 | 3.1:+43750624 | MS.gene94918:CDS |
| AGGATATGTATGAAGATAGG+AGG | 0.555793 | 3.1:+43750196 | MS.gene94918:CDS |
| AGTTGTAAATTATGCAAGGC+CGG | 0.557828 | 3.1:+43750728 | MS.gene94918:CDS |
| CAGTCTTCTAACGGTCGAGA+AGG | 0.558109 | 3.1:+43750654 | MS.gene94918:CDS |
| ATTACCTTAAGGATTCTGCT+GGG | 0.559779 | 3.1:+43748967 | MS.gene94918:CDS |
| TGCACGAATGGTGGATGACA+AGG | 0.561322 | 3.1:+43749782 | MS.gene94918:CDS |
| ATCAACTCTTGTTCTTCAAG+AGG | 0.561430 | 3.1:-43752709 | None:intergenic |
| AGAATATCTAGAGATTGGTT+AGG | 0.562164 | 3.1:+43753209 | MS.gene94918:CDS |
| AAGAGGTGGAGCTGGCCTGA+TGG | 0.565217 | 3.1:-43752692 | None:intergenic |
| TCACCACAATCAGGAAGTCA+AGG | 0.566128 | 3.1:+43750248 | MS.gene94918:CDS |
| ATCACTCCACCATGCATCGA+CGG | 0.566290 | 3.1:-43752749 | None:intergenic |
| CAAGGTTGATGACAAGATAG+AGG | 0.568710 | 3.1:+43750809 | MS.gene94918:CDS |
| CCAAAGATGGAGACAAAGTG+AGG | 0.574576 | 3.1:-43753307 | None:intergenic |
| GCTAGTGCCAAATTATGAGC+AGG | 0.576048 | 3.1:-43749723 | None:intergenic |
| CAAAGAAGTTAGTGCACGAA+TGG | 0.576933 | 3.1:+43749770 | MS.gene94918:CDS |
| GTCTTCTAACGGTCGAGAAG+GGG | 0.578103 | 3.1:+43750656 | MS.gene94918:CDS |
| ATTAGGAGTAATCCAATGAT+GGG | 0.578224 | 3.1:+43750690 | MS.gene94918:CDS |
| TAATGAGAATAGCGATGCAA+AGG | 0.580442 | 3.1:+43753568 | MS.gene94918:CDS |
| GTTGGTGATATTGAAGATGA+TGG | 0.587520 | 3.1:+43753494 | MS.gene94918:CDS |
| CAGAAATGGGATCCAAATTG+GGG | 0.587938 | 3.1:+43750003 | MS.gene94918:CDS |
| GTACAATTGTACAGGTAGCT+CGG | 0.594102 | 3.1:+43750874 | MS.gene94918:CDS |
| GGTTCTCCTCAGTCTTCTAA+CGG | 0.596785 | 3.1:+43750645 | MS.gene94918:CDS |
| AATATCAGTTAATATAGTTG+GGG | 0.597439 | 3.1:-43753270 | None:intergenic |
| ATATGTATGAAGATAGGAGG+GGG | 0.597580 | 3.1:+43750199 | MS.gene94918:CDS |
| GAGGTACTCTGTCAAGATAG+TGG | 0.599825 | 3.1:+43750828 | MS.gene94918:CDS |
| ATAGTGGTATCCGAGGCTGC+TGG | 0.600674 | 3.1:+43750844 | MS.gene94918:CDS |
| TTGTGGTGTTACTGAAAATG+GGG | 0.601376 | 3.1:+43753427 | MS.gene94918:CDS |
| ACGTGCAAGGAAGAAAGAGC+TGG | 0.601552 | 3.1:-43750510 | None:intergenic |
| GAAGAGAAACTTGTATATTG+TGG | 0.603101 | 3.1:+43753410 | MS.gene94918:CDS |
| TTGTCATCAACCTTGTATGT+GGG | 0.607168 | 3.1:-43750801 | None:intergenic |
| TCGTTTGGTCAGGACTTGCG+TGG | 0.610971 | 3.1:+43749942 | MS.gene94918:CDS |
| GACAAGGACAACAGTGAGAG+TGG | 0.610991 | 3.1:+43753527 | MS.gene94918:CDS |
| TATTCTGTCTGTTGAAGAGG+GGG | 0.611735 | 3.1:-43750409 | None:intergenic |
| TTGAGATGAGACAACCTGGC+CGG | 0.611994 | 3.1:+43752665 | MS.gene94918:CDS |
| TGTGGAATGGAAATTCCACC+TGG | 0.612194 | 3.1:+43749071 | MS.gene94918:CDS |
| GTGGATAGTATCAACGTGCA+AGG | 0.618780 | 3.1:-43750523 | None:intergenic |
| AGATGGAAGTGGAAATCTTG+AGG | 0.619674 | 3.1:+43750935 | MS.gene94918:CDS |
| TTGCAGTTGTTGGCACCGAG+AGG | 0.631113 | 3.1:+43749000 | MS.gene94918:CDS |
| ATGCATGGTGGAGTGATGGG+TGG | 0.632475 | 3.1:+43752755 | MS.gene94918:CDS |
| ATATCTAGAGATTGGTTAGG+CGG | 0.637464 | 3.1:+43753212 | MS.gene94918:CDS |
| CATGTGTCTAACACTCCTCT+CGG | 0.638599 | 3.1:-43749015 | None:intergenic |
| TTACCTTAAGGATTCTGCTG+GGG | 0.639280 | 3.1:+43748968 | MS.gene94918:CDS |
| ATTGCCCATGACGAAAACAA+AGG | 0.639287 | 3.1:-43750145 | None:intergenic |
| TCAGGACTTGCGTGGACATG+TGG | 0.639982 | 3.1:+43749950 | MS.gene94918:CDS |
| AATCTTCATCTTCTCCTGTG+AGG | 0.640822 | 3.1:-43750569 | None:intergenic |
| AAACTTGAGATGAGACAACC+TGG | 0.645947 | 3.1:+43752661 | MS.gene94918:CDS |
| ACCTGCCGCAGTCTTAACTC+GGG | 0.646835 | 3.1:+43750356 | MS.gene94918:CDS |
| GAACCGCCGTCGATGCATGG+TGG | 0.651144 | 3.1:+43752743 | MS.gene94918:CDS |
| GCTTGGCCAACTTAAAAGCA+GGG | 0.652630 | 3.1:-43752633 | None:intergenic |
| ATGGAGATCTAGAAGAGAGG+TGG | 0.652848 | 3.1:+43749100 | MS.gene94918:CDS |
| CACCACAATCAGGAAGTCAA+GGG | 0.653000 | 3.1:+43750249 | MS.gene94918:CDS |
| CAAATGGAGATCTAGAAGAG+AGG | 0.658480 | 3.1:+43749097 | MS.gene94918:CDS |
| GATGTGATGAAAACTTCTCG+TGG | 0.660703 | 3.1:-43750297 | None:intergenic |
| GGCTGTTGCTGAGAGACTCG+GGG | 0.661927 | 3.1:-43750548 | None:intergenic |
| GATCTCCATTTGAAACCAGG+TGG | 0.662375 | 3.1:-43749086 | None:intergenic |
| AGAACAAGAGTTGATTGCCG+AGG | 0.667261 | 3.1:+43752717 | MS.gene94918:CDS |
| GTATTCTGTCTGTTGAAGAG+GGG | 0.671319 | 3.1:-43750410 | None:intergenic |
| GGTAATAGTGAACTATACGA+TGG | 0.677069 | 3.1:-43748950 | None:intergenic |
| CATGTGCTATGTTATTGCAG+AGG | 0.677836 | 3.1:+43749034 | MS.gene94918:CDS |
| GTTGGTGATGATGCAAAGCA+AGG | 0.684297 | 3.1:+43750597 | MS.gene94918:CDS |
| ATAACTACAATTGACAACTG+TGG | 0.684835 | 3.1:+43752790 | MS.gene94918:CDS |
| ATGCAAAGCAAGGAGCCAAG+AGG | 0.687146 | 3.1:+43750607 | MS.gene94918:CDS |
| GATATGTATGAAGATAGGAG+GGG | 0.694967 | 3.1:+43750198 | MS.gene94918:CDS |
| TTGTATGTGGGATCAAACCA+AGG | 0.700037 | 3.1:-43750789 | None:intergenic |
| TCTCGACCGTTAGAAGACTG+AGG | 0.700818 | 3.1:-43750651 | None:intergenic |
| TGTCAAGATAGTGGTATCCG+AGG | 0.702081 | 3.1:+43750837 | MS.gene94918:CDS |
| GGTGATATTGAAGATGATGG+TGG | 0.703886 | 3.1:+43753497 | MS.gene94918:CDS |
| TGATGGTGGTAACAACGACA+AGG | 0.711985 | 3.1:+43753511 | MS.gene94918:CDS |
| AGATTGGTTAGGCGGCACGT+GGG | 0.722200 | 3.1:+43753220 | MS.gene94918:CDS |
| ACTCCACCATGCATCGACGG+CGG | 0.726898 | 3.1:-43752746 | None:intergenic |
| TTTGACTTAAGCAAACTGCG+TGG | 0.766470 | 3.1:+43750474 | MS.gene94918:CDS |
| GTGTTCCCGAGTTAAGACTG+CGG | 0.789633 | 3.1:-43750361 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATTCTATTACAAAT+TGG | - | chr3.1:43753141-43753160 | None:intergenic | 10.0% |
| !! | ATTAAAAAATTGAATTCAAA+AGG | - | chr3.1:43752586-43752605 | None:intergenic | 10.0% |
| !!! | TTTGTAATAGAATTATTTTT+TGG | + | chr3.1:43753142-43753161 | MS.gene94918:intron | 10.0% |
| !! | ATAAGGAAAAATAAACAAAA+AGG | - | chr3.1:43749814-43749833 | None:intergenic | 15.0% |
| !! | ATGATCAAAACAATTATATA+TGG | - | chr3.1:43749223-43749242 | None:intergenic | 15.0% |
| !! | TAAATAACAGTAGATTATTT+AGG | + | chr3.1:43752329-43752348 | MS.gene94918:intron | 15.0% |
| !! | TAACAATATATCTAGAAAAA+TGG | + | chr3.1:43752479-43752498 | MS.gene94918:intron | 15.0% |
| !! | TAAGGAAAAATAAACAAAAA+GGG | - | chr3.1:43749813-43749832 | None:intergenic | 15.0% |
| !! | TAATATCAGTTAATATAGTT+GGG | - | chr3.1:43753274-43753293 | None:intergenic | 15.0% |
| !!! | AAGTAAATTTATCAGTTTTT+TGG | + | chr3.1:43749681-43749700 | MS.gene94918:intron | 15.0% |
| !!! | ATTTTTCTAGATATATTGTT+AGG | - | chr3.1:43752480-43752499 | None:intergenic | 15.0% |
| !!! | CATTTTATACTATAAATTGA+TGG | + | chr3.1:43751632-43751651 | MS.gene94918:intron | 15.0% |
| !!! | TGAATATTTTGTTTTACATT+GGG | - | chr3.1:43752515-43752534 | None:intergenic | 15.0% |
| !!! | TTGAATATTTTGTTTTACAT+TGG | - | chr3.1:43752516-43752535 | None:intergenic | 15.0% |
| !!! | TTTTTCTAGATATATTGTTA+GGG | - | chr3.1:43752479-43752498 | None:intergenic | 15.0% |
| !! | AAATAGAGAAAATGAGAATA+AGG | - | chr3.1:43749831-43749850 | None:intergenic | 20.0% |
| !! | AACTGATAAATATTCTATGT+TGG | + | chr3.1:43751788-43751807 | MS.gene94918:intron | 20.0% |
| !! | AATATCAGTTAATATAGTTG+GGG | - | chr3.1:43753273-43753292 | None:intergenic | 20.0% |
| !! | ATCAAGATAAAACCTTAAAT+AGG | - | chr3.1:43751046-43751065 | None:intergenic | 20.0% |
| !! | ATTATGCTGAAAATAGTTTA+TGG | + | chr3.1:43753015-43753034 | MS.gene94918:intron | 20.0% |
| !! | ATTTAGCATAGAAAATGTAT+AGG | + | chr3.1:43751738-43751757 | MS.gene94918:intron | 20.0% |
| !! | CAACGAAAATATAGAAAAAT+AGG | - | chr3.1:43751463-43751482 | None:intergenic | 20.0% |
| !! | CTAATATCAGTTAATATAGT+TGG | - | chr3.1:43753275-43753294 | None:intergenic | 20.0% |
| !! | TATAAAATGATGTCAAATAG+AGG | - | chr3.1:43749316-43749335 | None:intergenic | 20.0% |
| !! | TTCACATTTGCATAAATAAT+GGG | + | chr3.1:43751016-43751035 | MS.gene94918:intron | 20.0% |
| !! | TTTCACATTTGCATAAATAA+TGG | + | chr3.1:43751015-43751034 | MS.gene94918:intron | 20.0% |
| !!! | CTTTTCTATTGTTTCTAAAT+AGG | + | chr3.1:43751871-43751890 | MS.gene94918:intron | 20.0% |
| !!! | TAGAATTATTTTTTGGTATC+AGG | + | chr3.1:43753149-43753168 | MS.gene94918:intron | 20.0% |
| !!! | TTTACTTTGACTTAAACTTT+GGG | - | chr3.1:43751606-43751625 | None:intergenic | 20.0% |
| !!! | TTTATAGTGCATCTTTTTTT+TGG | + | chr3.1:43751970-43751989 | MS.gene94918:intron | 20.0% |
| !!! | TTTTACTTTGACTTAAACTT+TGG | - | chr3.1:43751607-43751626 | None:intergenic | 20.0% |
| !!! | TTTTCTAGATATATTGTTAG+GGG | - | chr3.1:43752478-43752497 | None:intergenic | 20.0% |
| ! | AAACAGCAACAATATTGATA+TGG | + | chr3.1:43749598-43749617 | MS.gene94918:intron | 25.0% |
| ! | AAATATACTATTCTTGGCAT+TGG | + | chr3.1:43751379-43751398 | MS.gene94918:intron | 25.0% |
| ! | AAGCTATCTTAGAAAGTTAA+TGG | + | chr3.1:43752991-43753010 | MS.gene94918:intron | 25.0% |
| ! | AATTATTGTTCAACCTACAA+TGG | - | chr3.1:43749476-43749495 | None:intergenic | 25.0% |
| ! | AATTTACAACTTGGAAAGTT+TGG | - | chr3.1:43750719-43750738 | None:intergenic | 25.0% |
| ! | ACTTAAGAATATCTAGAGAT+TGG | + | chr3.1:43753204-43753223 | MS.gene94918:CDS | 25.0% |
| ! | AGCTATCTTAGAAAGTTAAT+GGG | + | chr3.1:43752992-43753011 | MS.gene94918:intron | 25.0% |
| ! | ATTCTATTACAAATTGGAGA+AGG | - | chr3.1:43753135-43753154 | None:intergenic | 25.0% |
| ! | ATTCTGACACATATTGTTAT+CGG | - | chr3.1:43752428-43752447 | None:intergenic | 25.0% |
| ! | CAACTGAAATATACTATTCT+TGG | + | chr3.1:43751373-43751392 | MS.gene94918:intron | 25.0% |
| ! | GAAAATTTGAAAAGTTGAGA+AGG | - | chr3.1:43751439-43751458 | None:intergenic | 25.0% |
| ! | GATAACGAAATACACATTTA+AGG | + | chr3.1:43752110-43752129 | MS.gene94918:intron | 25.0% |
| ! | TATAGTTCACTATTACCTTA+AGG | + | chr3.1:43748956-43748975 | MS.gene94918:CDS | 25.0% |
| ! | TCAAAACAAAATACCTTGAA+TGG | + | chr3.1:43751665-43751684 | MS.gene94918:intron | 25.0% |
| ! | TTATACTAAATAGCGTATTG+TGG | + | chr3.1:43749331-43749350 | MS.gene94918:intron | 25.0% |
| ! | TTGGAAAAAAATGTAAGATG+TGG | + | chr3.1:43751807-43751826 | MS.gene94918:intron | 25.0% |
| ! | TTGGATTTCAAATTACAGTA+TGG | + | chr3.1:43749700-43749719 | MS.gene94918:intron | 25.0% |
| !! | ACACATTTAAGGTAAAAAGT+TGG | + | chr3.1:43752121-43752140 | MS.gene94918:intron | 25.0% |
| !! | ACTATAAATTGATGGTAGAT+TGG | + | chr3.1:43751640-43751659 | MS.gene94918:intron | 25.0% |
| !! | GTTTTATCTTGATAGAAGAA+CGG | + | chr3.1:43751053-43751072 | MS.gene94918:intron | 25.0% |
| !!! | AATCTTGATCTCCATTTTTT+AGG | + | chr3.1:43752603-43752622 | MS.gene94918:intron | 25.0% |
| !!! | ATTCATTTTTCAAATGTAGC+TGG | + | chr3.1:43752396-43752415 | MS.gene94918:intron | 25.0% |
| !!! | TATTCACTGTTTTTTCTGTA+TGG | + | chr3.1:43751281-43751300 | MS.gene94918:intron | 25.0% |
| !!! | TCTCTTGATTTTTAGTTCAA+GGG | - | chr3.1:43750036-43750055 | None:intergenic | 25.0% |
| !!! | TTCTCTTGATTTTTAGTTCA+AGG | - | chr3.1:43750037-43750056 | None:intergenic | 25.0% |
| !!! | TTTCATTTTTTGTCAGTACT+TGG | + | chr3.1:43750985-43751004 | MS.gene94918:intron | 25.0% |
| AAGCACTTGTGAAATTGTTT+AGG | - | chr3.1:43753057-43753076 | None:intergenic | 30.0% | |
| AATATAGTTGGGGTTATATC+AGG | - | chr3.1:43753263-43753282 | None:intergenic | 30.0% | |
| ACATGATATCTGTAGTTTCA+AGG | + | chr3.1:43751713-43751732 | MS.gene94918:intron | 30.0% | |
| ACTTCAAAGAAATGATCAAG+CGG | - | chr3.1:43752298-43752317 | None:intergenic | 30.0% | |
| ACTTTAAATAAGAGAAGCCT+TGG | - | chr3.1:43751248-43751267 | None:intergenic | 30.0% | |
| AGAAAAAGGTTAAAGTAAGG+TGG | + | chr3.1:43750223-43750242 | MS.gene94918:CDS | 30.0% | |
| AGAGTAATTGTTATGCATCA+AGG | - | chr3.1:43752559-43752578 | None:intergenic | 30.0% | |
| AGTTTCTCTTCAACAATATC+AGG | - | chr3.1:43753401-43753420 | None:intergenic | 30.0% | |
| ATAACTACAATTGACAACTG+TGG | + | chr3.1:43752790-43752809 | MS.gene94918:CDS | 30.0% | |
| ATCTTCAATATCACCAACTT+GGG | - | chr3.1:43753492-43753511 | None:intergenic | 30.0% | |
| ATGGCGAGTAAAATATGATA+TGG | + | chr3.1:43752446-43752465 | MS.gene94918:intron | 30.0% | |
| ATTAGGAGTAATCCAATGAT+GGG | + | chr3.1:43750690-43750709 | MS.gene94918:CDS | 30.0% | |
| CATCTTGAACATCATCATAT+TGG | - | chr3.1:43750914-43750933 | None:intergenic | 30.0% | |
| CCTTGAATGGAAATTAAATC+TGG | + | chr3.1:43751678-43751697 | MS.gene94918:intron | 30.0% | |
| GAAGAGAAACTTGTATATTG+TGG | + | chr3.1:43753410-43753429 | MS.gene94918:CDS | 30.0% | |
| GAGAAGGATGACAAAATTTA+GGG | - | chr3.1:43753119-43753138 | None:intergenic | 30.0% | |
| GAGTAATTGTTATGCATCAA+GGG | - | chr3.1:43752558-43752577 | None:intergenic | 30.0% | |
| GATAACAATATGTGTCAGAA+TGG | + | chr3.1:43752427-43752446 | MS.gene94918:intron | 30.0% | |
| GATGTCTGAATTGGATAATT+TGG | - | chr3.1:43749924-43749943 | None:intergenic | 30.0% | |
| TATTCATCAGAAACAGTAGA+TGG | - | chr3.1:43749854-43749873 | None:intergenic | 30.0% | |
| TCCAAGTTGTAAATTATGCA+AGG | + | chr3.1:43750724-43750743 | MS.gene94918:CDS | 30.0% | |
| TTGTTAAATAGCAGCAATTG+CGG | - | chr3.1:43749446-43749465 | None:intergenic | 30.0% | |
| ! | AATGTTCAAGTTTACTTTCC+TGG | + | chr3.1:43752820-43752839 | MS.gene94918:CDS | 30.0% |
| ! | AGAATATCTAGAGATTGGTT+AGG | + | chr3.1:43753209-43753228 | MS.gene94918:CDS | 30.0% |
| ! | ATCTTTTTGTTCGAACTGAA+TGG | + | chr3.1:43752241-43752260 | MS.gene94918:intron | 30.0% |
| ! | CCAGATTTAATTTCCATTCA+AGG | - | chr3.1:43751681-43751700 | None:intergenic | 30.0% |
| ! | CTATTAGTTTAAGCTTAACG+TGG | + | chr3.1:43751313-43751332 | MS.gene94918:intron | 30.0% |
| ! | CTGAATTCATTGATGATTGA+TGG | + | chr3.1:43751121-43751140 | MS.gene94918:intron | 30.0% |
| ! | GAACCATTATGTTGCTTATT+TGG | + | chr3.1:43750173-43750192 | MS.gene94918:CDS | 30.0% |
| ! | GATAATTTGGAGTTACTCTT+TGG | - | chr3.1:43749911-43749930 | None:intergenic | 30.0% |
| ! | GTGTAAAAGTGTAGAACTAA+TGG | + | chr3.1:43753613-43753632 | MS.gene94918:CDS | 30.0% |
| ! | TTTTCAAATGTAGCTGGTAA+TGG | + | chr3.1:43752402-43752421 | MS.gene94918:intron | 30.0% |
| !! | ATAATGGGTGTTCCTATTTA+AGG | + | chr3.1:43751031-43751050 | MS.gene94918:intron | 30.0% |
| !! | ATTGTGGTGTTACTGAAAAT+GGG | + | chr3.1:43753426-43753445 | MS.gene94918:CDS | 30.0% |
| !! | TATTGTGGTGTTACTGAAAA+TGG | + | chr3.1:43753425-43753444 | MS.gene94918:CDS | 30.0% |
| AAAAAGATGCAGACTCAGTT+GGG | + | chr3.1:43753330-43753349 | MS.gene94918:CDS | 35.0% | |
| AAAGTTTGGTATCCCATCAT+TGG | - | chr3.1:43750705-43750724 | None:intergenic | 35.0% | |
| AAATTCCACCTGGTTTCAAA+TGG | + | chr3.1:43749081-43749100 | MS.gene94918:CDS | 35.0% | |
| ACAGAATACATCTGTGCTTT+AGG | + | chr3.1:43750424-43750443 | MS.gene94918:CDS | 35.0% | |
| AGGATATGTATGAAGATAGG+AGG | + | chr3.1:43750196-43750215 | MS.gene94918:CDS | 35.0% | |
| AGTTGTAAATTATGCAAGGC+CGG | + | chr3.1:43750728-43750747 | MS.gene94918:CDS | 35.0% | |
| ATATGTATGAAGATAGGAGG+GGG | + | chr3.1:43750199-43750218 | MS.gene94918:CDS | 35.0% | |
| ATCAACTCTTGTTCTTCAAG+AGG | - | chr3.1:43752712-43752731 | None:intergenic | 35.0% | |
| ATGTATTCTGTCTGTTGAAG+AGG | - | chr3.1:43750415-43750434 | None:intergenic | 35.0% | |
| ATTACCTTAAGGATTCTGCT+GGG | + | chr3.1:43748967-43748986 | MS.gene94918:CDS | 35.0% | |
| CATCTTCAATATCACCAACT+TGG | - | chr3.1:43753493-43753512 | None:intergenic | 35.0% | |
| CCTCCAAATAAGCAACATAA+TGG | - | chr3.1:43750179-43750198 | None:intergenic | 35.0% | |
| GAAGATGAAGATTTGGATGT+TGG | + | chr3.1:43750579-43750598 | MS.gene94918:CDS | 35.0% | |
| GATATGTATGAAGATAGGAG+GGG | + | chr3.1:43750198-43750217 | MS.gene94918:CDS | 35.0% | |
| GATGATGTTCAAGATGAAGA+TGG | + | chr3.1:43750918-43750937 | MS.gene94918:CDS | 35.0% | |
| GATTAGGAGTAATCCAATGA+TGG | + | chr3.1:43750689-43750708 | MS.gene94918:CDS | 35.0% | |
| GCAAATGACAGTACATAAGA+AGG | + | chr3.1:43753181-43753200 | MS.gene94918:CDS | 35.0% | |
| GCCTTGCATAATTTACAACT+TGG | - | chr3.1:43750728-43750747 | None:intergenic | 35.0% | |
| GGAGAAGGATGACAAAATTT+AGG | - | chr3.1:43753120-43753139 | None:intergenic | 35.0% | |
| GGATATGTATGAAGATAGGA+GGG | + | chr3.1:43750197-43750216 | MS.gene94918:CDS | 35.0% | |
| GGCAGAAAAAGGTTAAAGTA+AGG | + | chr3.1:43750220-43750239 | MS.gene94918:CDS | 35.0% | |
| GGTAATAGTGAACTATACGA+TGG | - | chr3.1:43748953-43748972 | None:intergenic | 35.0% | |
| GTTCTTGGAAATTTGTGGAA+TGG | + | chr3.1:43749058-43749077 | MS.gene94918:CDS | 35.0% | |
| TAACAACACTTGACCATTGT+AGG | + | chr3.1:43749460-43749479 | MS.gene94918:intron | 35.0% | |
| TAATGAGAATAGCGATGCAA+AGG | + | chr3.1:43753568-43753587 | MS.gene94918:CDS | 35.0% | |
| TATCCAATTCAGACATCGTT+TGG | + | chr3.1:43749927-43749946 | MS.gene94918:CDS | 35.0% | |
| TATTACCTTAAGGATTCTGC+TGG | + | chr3.1:43748966-43748985 | MS.gene94918:CDS | 35.0% | |
| TATTAGAGACCAAGAATCAG+TGG | - | chr3.1:43752189-43752208 | None:intergenic | 35.0% | |
| TCATGTAGTTTAACTGTGCT+TGG | + | chr3.1:43752266-43752285 | MS.gene94918:intron | 35.0% | |
| TGGAGGATATGTATGAAGAT+AGG | + | chr3.1:43750193-43750212 | MS.gene94918:CDS | 35.0% | |
| TGTATTCTGTCTGTTGAAGA+GGG | - | chr3.1:43750414-43750433 | None:intergenic | 35.0% | |
| TGTCTCATCTCAAGTTTATC+AGG | - | chr3.1:43752658-43752677 | None:intergenic | 35.0% | |
| TTGTCATCAACCTTGTATGT+GGG | - | chr3.1:43750804-43750823 | None:intergenic | 35.0% | |
| ! | AAAAGGTTGATTGTCAACCT+TGG | + | chr3.1:43750772-43750791 | MS.gene94918:CDS | 35.0% |
| ! | ATATCTAGAGATTGGTTAGG+CGG | + | chr3.1:43753212-43753231 | MS.gene94918:CDS | 35.0% |
| ! | CCATTATGTTGCTTATTTGG+AGG | + | chr3.1:43750176-43750195 | MS.gene94918:CDS | 35.0% |
| ! | CTGTGCTTTAGGCAATTAAA+AGG | + | chr3.1:43750435-43750454 | MS.gene94918:CDS | 35.0% |
| ! | GAGATTGCTTTCTCTGAAAA+AGG | + | chr3.1:43750755-43750774 | MS.gene94918:CDS | 35.0% |
| ! | TATACTATTCTTGGCATTGG+CGG | + | chr3.1:43751382-43751401 | MS.gene94918:intron | 35.0% |
| ! | TCTGCATCTTTTTCCAAAGA+TGG | - | chr3.1:43753323-43753342 | None:intergenic | 35.0% |
| !! | AAGAGTGTCTCATACATTCA+TGG | - | chr3.1:43751914-43751933 | None:intergenic | 35.0% |
| !! | GTTGGTGATATTGAAGATGA+TGG | + | chr3.1:43753494-43753513 | MS.gene94918:CDS | 35.0% |
| !! | TCAGAAAAAAGTACCCAAGT+TGG | + | chr3.1:43753476-43753495 | MS.gene94918:CDS | 35.0% |
| !! | TTGTGGTGTTACTGAAAATG+GGG | + | chr3.1:43753427-43753446 | MS.gene94918:CDS | 35.0% |
| !!! | ACTTGGGTACTTTTTTCTGA+AGG | - | chr3.1:43753476-43753495 | None:intergenic | 35.0% |
| !!! | ATCCTGCTTTTTGCAGAAAT+GGG | + | chr3.1:43749990-43750009 | MS.gene94918:CDS | 35.0% |
| !!! | CAATCCTTTGTTTTCGTCAT+GGG | + | chr3.1:43750141-43750160 | MS.gene94918:CDS | 35.0% |
| !!! | TATCCTGCTTTTTGCAGAAA+TGG | + | chr3.1:43749989-43750008 | MS.gene94918:CDS | 35.0% |
| !!! | TCAATCCTTTGTTTTCGTCA+TGG | + | chr3.1:43750140-43750159 | MS.gene94918:CDS | 35.0% |
| !!! | TGATCTCCATTTTTTAGGAG+TGG | + | chr3.1:43752608-43752627 | MS.gene94918:intron | 35.0% |
| AAACTTGAGATGAGACAACC+TGG | + | chr3.1:43752661-43752680 | MS.gene94918:CDS | 40.0% | |
| AACGTGGAATTTAGACATGC+TGG | + | chr3.1:43751329-43751348 | MS.gene94918:intron | 40.0% | |
| AACTCTTGTTCTTCAAGAGG+TGG | - | chr3.1:43752709-43752728 | None:intergenic | 40.0% | |
| AATCTTCATCTTCTCCTGTG+AGG | - | chr3.1:43750572-43750591 | None:intergenic | 40.0% | |
| AATTCAGACATCGTTTGGTC+AGG | + | chr3.1:43749932-43749951 | MS.gene94918:CDS | 40.0% | |
| AGAGAAAGCAATCTCCTATC+CGG | - | chr3.1:43750750-43750769 | None:intergenic | 40.0% | |
| AGATGGAAGTGGAAATCTTG+AGG | + | chr3.1:43750935-43750954 | MS.gene94918:CDS | 40.0% | |
| AGGAGACAGTCAATGCAATA+TGG | - | chr3.1:43751516-43751535 | None:intergenic | 40.0% | |
| AGGGATCCACTCCTAAAAAA+TGG | - | chr3.1:43752617-43752636 | None:intergenic | 40.0% | |
| AGTATGGCCTGCTCATAATT+TGG | + | chr3.1:43749716-43749735 | MS.gene94918:intron | 40.0% | |
| AGTCAATGCAATATGGTCCA+AGG | - | chr3.1:43751509-43751528 | None:intergenic | 40.0% | |
| ATAGCGATGCAAAGGTGATT+CGG | + | chr3.1:43753576-43753595 | MS.gene94918:CDS | 40.0% | |
| ATCCCATTTCTGCAAAAAGC+AGG | - | chr3.1:43749995-43750014 | None:intergenic | 40.0% | |
| ATTGCCCATGACGAAAACAA+AGG | - | chr3.1:43750148-43750167 | None:intergenic | 40.0% | |
| CAAAGAAGTTAGTGCACGAA+TGG | + | chr3.1:43749770-43749789 | MS.gene94918:CDS | 40.0% | |
| CAAATGGAGATCTAGAAGAG+AGG | + | chr3.1:43749097-43749116 | MS.gene94918:CDS | 40.0% | |
| CACAGGAGAAGATGAAGATT+TGG | + | chr3.1:43750572-43750591 | MS.gene94918:CDS | 40.0% | |
| CAGAAATGGGATCCAAATTG+GGG | + | chr3.1:43750003-43750022 | MS.gene94918:CDS | 40.0% | |
| CAGTTGTTGTACTTGTTCCA+AGG | + | chr3.1:43751228-43751247 | MS.gene94918:intron | 40.0% | |
| CATCTCAAGTTTATCAGGCT+TGG | - | chr3.1:43752653-43752672 | None:intergenic | 40.0% | |
| CATGTGCTATGTTATTGCAG+AGG | + | chr3.1:43749034-43749053 | MS.gene94918:CDS | 40.0% | |
| CTAGCTCATAAGATCGCAAA+TGG | + | chr3.1:43749741-43749760 | MS.gene94918:CDS | 40.0% | |
| CTCTCTCACTAGGAAAAAGT+TGG | + | chr3.1:43751534-43751553 | MS.gene94918:intron | 40.0% | |
| CTGAAATCGCTGTATAAGAC+AGG | - | chr3.1:43752355-43752374 | None:intergenic | 40.0% | |
| CTGAAGGAGGTTTATCATCT+TGG | - | chr3.1:43753460-43753479 | None:intergenic | 40.0% | |
| CTTGGAACAAGTACAACAAC+TGG | - | chr3.1:43751230-43751249 | None:intergenic | 40.0% | |
| CTTGTCATCAACCTTGTATG+TGG | - | chr3.1:43750805-43750824 | None:intergenic | 40.0% | |
| GAAAAAGATGCAGACTCAGT+TGG | + | chr3.1:43753329-43753348 | MS.gene94918:CDS | 40.0% | |
| GAGGAGTTCTTGGAAATTTG+TGG | + | chr3.1:43749053-43749072 | MS.gene94918:CDS | 40.0% | |
| GAGGGAAAAAATTTGTGTCG+TGG | - | chr3.1:43751187-43751206 | None:intergenic | 40.0% | |
| GATGTGATGAAAACTTCTCG+TGG | - | chr3.1:43750300-43750319 | None:intergenic | 40.0% | |
| GCAGAAATGGGATCCAAATT+GGG | + | chr3.1:43750002-43750021 | MS.gene94918:CDS | 40.0% | |
| GGTTTATTAGACTTCTCAGC+AGG | - | chr3.1:43753380-43753399 | None:intergenic | 40.0% | |
| GTACAATTGTACAGGTAGCT+CGG | + | chr3.1:43750874-43750893 | MS.gene94918:CDS | 40.0% | |
| GTATTCTGTCTGTTGAAGAG+GGG | - | chr3.1:43750413-43750432 | None:intergenic | 40.0% | |
| GTGACAATTAACAGCTTACC+AGG | - | chr3.1:43752841-43752860 | None:intergenic | 40.0% | |
| GTTCAAGATGAAGATGGAAG+TGG | + | chr3.1:43750924-43750943 | MS.gene94918:CDS | 40.0% | |
| GTTCAGGTGTACAATTGTAC+AGG | + | chr3.1:43750866-43750885 | MS.gene94918:CDS | 40.0% | |
| GTTGAAGAGGGGGAAAAATA+AGG | - | chr3.1:43750402-43750421 | None:intergenic | 40.0% | |
| TAAATTATGCAAGGCCGGAT+AGG | + | chr3.1:43750733-43750752 | MS.gene94918:CDS | 40.0% | |
| TATTCTGTCTGTTGAAGAGG+GGG | - | chr3.1:43750412-43750431 | None:intergenic | 40.0% | |
| TGACCAAACGATGTCTGAAT+TGG | - | chr3.1:43749933-43749952 | None:intergenic | 40.0% | |
| TGCAGAAATGGGATCCAAAT+TGG | + | chr3.1:43750001-43750020 | MS.gene94918:CDS | 40.0% | |
| TGTTATTGCAGAGGAGTTCT+TGG | + | chr3.1:43749043-43749062 | MS.gene94918:CDS | 40.0% | |
| TTACCTTAAGGATTCTGCTG+GGG | + | chr3.1:43748968-43748987 | MS.gene94918:CDS | 40.0% | |
| TTGTATGTGGGATCAAACCA+AGG | - | chr3.1:43750792-43750811 | None:intergenic | 40.0% | |
| TTTCCCTATAATGCCCTGTT+TGG | + | chr3.1:43752864-43752883 | MS.gene94918:intron | 40.0% | |
| ! | AAATTTTGAACCCCCAACTC+AGG | + | chr3.1:43752151-43752170 | MS.gene94918:intron | 40.0% |
| ! | AAGGGGTTAGGAAGTTGATT+AGG | + | chr3.1:43750673-43750692 | MS.gene94918:CDS | 40.0% |
| ! | AATTTTGAACCCCCAACTCA+GGG | + | chr3.1:43752152-43752171 | MS.gene94918:intron | 40.0% |
| ! | ACGATCTGTGTTTTGTGGAA+TGG | + | chr3.1:43748898-43748917 | MS.gene94918:CDS | 40.0% |
| ! | ACGCAGTTTGCTTAAGTCAA+AGG | - | chr3.1:43750475-43750494 | None:intergenic | 40.0% |
| ! | CGCAGTTTGCTTAAGTCAAA+GGG | - | chr3.1:43750474-43750493 | None:intergenic | 40.0% |
| ! | CTAGATCTCCATTTGAAACC+AGG | - | chr3.1:43749092-43749111 | None:intergenic | 40.0% |
| ! | GATAGACGATCTGTGTTTTG+TGG | + | chr3.1:43748893-43748912 | MS.gene94918:CDS | 40.0% |
| ! | GGTCCAAGGCTTAATTTTGA+GGG | - | chr3.1:43751495-43751514 | None:intergenic | 40.0% |
| ! | GGTGATATTGAAGATGATGG+TGG | + | chr3.1:43753497-43753516 | MS.gene94918:CDS | 40.0% |
| ! | GTCCAAGGCTTAATTTTGAG+GGG | - | chr3.1:43751494-43751513 | None:intergenic | 40.0% |
| ! | TGGTCCAAGGCTTAATTTTG+AGG | - | chr3.1:43751496-43751515 | None:intergenic | 40.0% |
| ! | TTGGTTTGATCCCACATACA+AGG | + | chr3.1:43750791-43750810 | MS.gene94918:CDS | 40.0% |
| ! | TTTGACTTAAGCAAACTGCG+TGG | + | chr3.1:43750474-43750493 | MS.gene94918:CDS | 40.0% |
| !! | AAGAGGAGTAGAAGTGCTAA+GGG | + | chr3.1:43750624-43750643 | MS.gene94918:CDS | 40.0% |
| !! | CAACTTTTTCCTAGTGAGAG+AGG | - | chr3.1:43751536-43751555 | None:intergenic | 40.0% |
| !! | CAAGGTTGATGACAAGATAG+AGG | + | chr3.1:43750809-43750828 | MS.gene94918:CDS | 40.0% |
| !! | CATTTTGTTTCACAAGAGCG+TGG | + | chr3.1:43748927-43748946 | MS.gene94918:CDS | 40.0% |
| !! | TCCAAGGCTTAATTTTGAGG+GGG | - | chr3.1:43751493-43751512 | None:intergenic | 40.0% |
| !! | TTTGTTTTCGTCATGGGCAA+TGG | + | chr3.1:43750147-43750166 | MS.gene94918:CDS | 40.0% |
| !!! | TGGGTACTTTTTTCTGAAGG+AGG | - | chr3.1:43753473-43753492 | None:intergenic | 40.0% |
| !!! | TTTTTTCCCTCCTAGTCATG+TGG | + | chr3.1:43751196-43751215 | MS.gene94918:intron | 40.0% |
| AAGGGCTTCTTACCCCAATT+TGG | - | chr3.1:43750018-43750037 | None:intergenic | 45.0% | |
| AAGGTGGTTTCACCACAATC+AGG | + | chr3.1:43750239-43750258 | MS.gene94918:CDS | 45.0% | |
| ACCCCCTCAAAATTAAGCCT+TGG | + | chr3.1:43751489-43751508 | MS.gene94918:intron | 45.0% | |
| ACGCATGCATACTCTTTCTC+AGG | + | chr3.1:43749880-43749899 | MS.gene94918:intron | 45.0% | |
| AGAAGTTAGTGCACGAATGG+TGG | + | chr3.1:43749773-43749792 | MS.gene94918:CDS | 45.0% | |
| AGTCTTCTAACGGTCGAGAA+GGG | + | chr3.1:43750655-43750674 | MS.gene94918:CDS | 45.0% | |
| ATCAGTGCAGAGTGTGTTGA+TGG | + | chr3.1:43750333-43750352 | MS.gene94918:CDS | 45.0% | |
| ATGGAGATCTAGAAGAGAGG+TGG | + | chr3.1:43749100-43749119 | MS.gene94918:CDS | 45.0% | |
| ATTGCTACCACATGACTAGG+AGG | - | chr3.1:43751206-43751225 | None:intergenic | 45.0% | |
| CACCACAATCAGGAAGTCAA+GGG | + | chr3.1:43750249-43750268 | MS.gene94918:CDS | 45.0% | |
| CATGTGTCTAACACTCCTCT+CGG | - | chr3.1:43749018-43749037 | None:intergenic | 45.0% | |
| CCAAAGATGGAGACAAAGTG+AGG | - | chr3.1:43753310-43753329 | None:intergenic | 45.0% | |
| CCTCACTTTGTCTCCATCTT+TGG | + | chr3.1:43753307-43753326 | MS.gene94918:CDS | 45.0% | |
| CGTGGATGAGTATTTCGTAC+TGG | - | chr3.1:43750282-43750301 | None:intergenic | 45.0% | |
| CTAGAAGAGAGGTGGTTGAT+TGG | + | chr3.1:43749108-43749127 | MS.gene94918:CDS | 45.0% | |
| CTTAGCACTTCTACTCCTCT+TGG | - | chr3.1:43750625-43750644 | None:intergenic | 45.0% | |
| GAGTCGTTTCTTGCAGTTGT+TGG | + | chr3.1:43748990-43749009 | MS.gene94918:CDS | 45.0% | |
| GCACTTAGTGGGATAAGACT+TGG | + | chr3.1:43749390-43749409 | MS.gene94918:intron | 45.0% | |
| GCTAGTGCCAAATTATGAGC+AGG | - | chr3.1:43749726-43749745 | None:intergenic | 45.0% | |
| GCTTGGCCAACTTAAAAGCA+GGG | - | chr3.1:43752636-43752655 | None:intergenic | 45.0% | |
| GGAATTGCTACCACATGACT+AGG | - | chr3.1:43751209-43751228 | None:intergenic | 45.0% | |
| GGTTCTCCTCAGTCTTCTAA+CGG | + | chr3.1:43750645-43750664 | MS.gene94918:CDS | 45.0% | |
| GTGGATAGTATCAACGTGCA+AGG | - | chr3.1:43750526-43750545 | None:intergenic | 45.0% | |
| TCACCACAATCAGGAAGTCA+AGG | + | chr3.1:43750248-43750267 | MS.gene94918:CDS | 45.0% | |
| TGTGGAATGGAAATTCCACC+TGG | + | chr3.1:43749071-43749090 | MS.gene94918:CDS | 45.0% | |
| TTGCTACCACATGACTAGGA+GGG | - | chr3.1:43751205-43751224 | None:intergenic | 45.0% | |
| ! | AGAACAAGAGTTGATTGCCG+AGG | + | chr3.1:43752717-43752736 | MS.gene94918:CDS | 45.0% |
| ! | CGGCACGTGGGTTAATATAA+AGG | + | chr3.1:43753232-43753251 | MS.gene94918:CDS | 45.0% |
| ! | GAGGTACTCTGTCAAGATAG+TGG | + | chr3.1:43750828-43750847 | MS.gene94918:CDS | 45.0% |
| ! | GATCTCCATTTGAAACCAGG+TGG | - | chr3.1:43749089-43749108 | None:intergenic | 45.0% |
| ! | TGTCAAGATAGTGGTATCCG+AGG | + | chr3.1:43750837-43750856 | MS.gene94918:CDS | 45.0% |
| !! | CAAGAGGAGTAGAAGTGCTA+AGG | + | chr3.1:43750623-43750642 | MS.gene94918:CDS | 45.0% |
| !! | GTGGATCCCTGCTTTTAAGT+TGG | + | chr3.1:43752627-43752646 | MS.gene94918:CDS | 45.0% |
| !! | GTTGGTGATGATGCAAAGCA+AGG | + | chr3.1:43750597-43750616 | MS.gene94918:CDS | 45.0% |
| !! | TGATGGTGGTAACAACGACA+AGG | + | chr3.1:43753511-43753530 | MS.gene94918:CDS | 45.0% |
| !! | ATTTGTAAAATAATAATATA+AGG | + | chr3.1:43749493-43749512 | MS.gene94918:intron | 5.0% |
| ACGTGCAAGGAAGAAAGAGC+TGG | - | chr3.1:43750513-43750532 | None:intergenic | 50.0% | |
| ACTCCCCAGCAGAATCCTTA+AGG | - | chr3.1:43748974-43748993 | None:intergenic | 50.0% | |
| AGATAGGAGGGGGCAGAAAA+AGG | + | chr3.1:43750209-43750228 | MS.gene94918:CDS | 50.0% | |
| ATCACTCCACCATGCATCGA+CGG | - | chr3.1:43752752-43752771 | None:intergenic | 50.0% | |
| ATGCAAAGCAAGGAGCCAAG+AGG | + | chr3.1:43750607-43750626 | MS.gene94918:CDS | 50.0% | |
| CACCCTTGACTTCCTGATTG+TGG | - | chr3.1:43750254-43750273 | None:intergenic | 50.0% | |
| CAGTCTTCTAACGGTCGAGA+AGG | + | chr3.1:43750654-43750673 | MS.gene94918:CDS | 50.0% | |
| GACAAGGACAACAGTGAGAG+TGG | + | chr3.1:43753527-43753546 | MS.gene94918:CDS | 50.0% | |
| GCAGCAATACTGATGCGTAG+CGG | - | chr3.1:43749288-43749307 | None:intergenic | 50.0% | |
| GCGACGCTATAGCACTTAGT+GGG | + | chr3.1:43749379-43749398 | MS.gene94918:intron | 50.0% | |
| GGCTTGGCCAACTTAAAAGC+AGG | - | chr3.1:43752637-43752656 | None:intergenic | 50.0% | |
| GTCTTCTAACGGTCGAGAAG+GGG | + | chr3.1:43750656-43750675 | MS.gene94918:CDS | 50.0% | |
| GTGTTCCCGAGTTAAGACTG+CGG | - | chr3.1:43750364-43750383 | None:intergenic | 50.0% | |
| TCTCGACCGTTAGAAGACTG+AGG | - | chr3.1:43750654-43750673 | None:intergenic | 50.0% | |
| TGACTGTCTCCTCTCTCACT+AGG | + | chr3.1:43751524-43751543 | MS.gene94918:intron | 50.0% | |
| TGCGACGCTATAGCACTTAG+TGG | + | chr3.1:43749378-43749397 | MS.gene94918:intron | 50.0% | |
| TGTTCTTCAAGAGGTGGAGC+TGG | - | chr3.1:43752703-43752722 | None:intergenic | 50.0% | |
| TTGAGATGAGACAACCTGGC+CGG | + | chr3.1:43752665-43752684 | MS.gene94918:CDS | 50.0% | |
| ! | CAAGAGTTGATTGCCGAGGT+TGG | + | chr3.1:43752721-43752740 | MS.gene94918:CDS | 50.0% |
| ! | TCGATGCATGGTGGAGTGAT+GGG | + | chr3.1:43752752-43752771 | MS.gene94918:CDS | 50.0% |
| !! | TGCACGAATGGTGGATGACA+AGG | + | chr3.1:43749782-43749801 | MS.gene94918:CDS | 50.0% |
| !! | TTGGCAACGCCACTGATTCT+TGG | + | chr3.1:43752177-43752196 | MS.gene94918:intron | 50.0% |
| ACCTGCCGCAGTCTTAACTC+GGG | + | chr3.1:43750356-43750375 | MS.gene94918:CDS | 55.0% | |
| AGGCTGTTGCTGAGAGACTC+GGG | - | chr3.1:43750552-43750571 | None:intergenic | 55.0% | |
| ATAGTGGTATCCGAGGCTGC+TGG | + | chr3.1:43750844-43750863 | MS.gene94918:CDS | 55.0% | |
| CGTTGCCAAGACCCTGAGTT+GGG | - | chr3.1:43752166-43752185 | None:intergenic | 55.0% | |
| CTAACGGTCGAGAAGGGGTT+AGG | + | chr3.1:43750661-43750680 | MS.gene94918:CDS | 55.0% | |
| GACCTGCCGCAGTCTTAACT+CGG | + | chr3.1:43750355-43750374 | MS.gene94918:CDS | 55.0% | |
| GAGGCTGTTGCTGAGAGACT+CGG | - | chr3.1:43750553-43750572 | None:intergenic | 55.0% | |
| GTTGCCAAGACCCTGAGTTG+GGG | - | chr3.1:43752165-43752184 | None:intergenic | 55.0% | |
| TACACCTGAACCAGCAGCCT+CGG | - | chr3.1:43750857-43750876 | None:intergenic | 55.0% | |
| TCAGGACTTGCGTGGACATG+TGG | + | chr3.1:43749950-43749969 | MS.gene94918:CDS | 55.0% | |
| TCGTTTGGTCAGGACTTGCG+TGG | + | chr3.1:43749942-43749961 | MS.gene94918:CDS | 55.0% | |
| TCTCTCAGCAACAGCCTCAC+AGG | + | chr3.1:43750555-43750574 | MS.gene94918:CDS | 55.0% | |
| ! | AGATTGGTTAGGCGGCACGT+GGG | + | chr3.1:43753220-43753239 | MS.gene94918:CDS | 55.0% |
| ! | ATGCATGGTGGAGTGATGGG+TGG | + | chr3.1:43752755-43752774 | MS.gene94918:CDS | 55.0% |
| ! | GTCGATGCATGGTGGAGTGA+TGG | + | chr3.1:43752751-43752770 | MS.gene94918:CDS | 55.0% |
| ! | TTGCAGTTGTTGGCACCGAG+AGG | + | chr3.1:43749000-43749019 | MS.gene94918:CDS | 55.0% |
| ! | TTGCCAAGACCCTGAGTTGG+GGG | - | chr3.1:43752164-43752183 | None:intergenic | 55.0% |
| !! | ATGGTGGAGTGATGGGTGGT+GGG | + | chr3.1:43752759-43752778 | MS.gene94918:CDS | 55.0% |
| ATCGACGGCGGTTCCAACCT+CGG | - | chr3.1:43752737-43752756 | None:intergenic | 60.0% | |
| GAACCCCCAACTCAGGGTCT+TGG | + | chr3.1:43752158-43752177 | MS.gene94918:intron | 60.0% | |
| GCGTTGCCAAGACCCTGAGT+TGG | - | chr3.1:43752167-43752186 | None:intergenic | 60.0% | |
| GGCTGTTGCTGAGAGACTCG+GGG | - | chr3.1:43750551-43750570 | None:intergenic | 60.0% | |
| TCCCGAGTTAAGACTGCGGC+AGG | - | chr3.1:43750360-43750379 | None:intergenic | 60.0% | |
| TGAACCCCCTGGCCACTATG+TGG | - | chr3.1:43751410-43751429 | None:intergenic | 60.0% | |
| TGCTGAGAGACTCGGGGTTG+TGG | - | chr3.1:43750545-43750564 | None:intergenic | 60.0% | |
| TTGGAACCGCCGTCGATGCA+TGG | + | chr3.1:43752740-43752759 | MS.gene94918:CDS | 60.0% | |
| ! | AAGAGGTGGAGCTGGCCTGA+TGG | - | chr3.1:43752695-43752714 | None:intergenic | 60.0% |
| ! | ACTCCACCATGCATCGACGG+CGG | - | chr3.1:43752749-43752768 | None:intergenic | 60.0% |
| ! | GAAGGTGCAGTTGAACCCCC+TGG | - | chr3.1:43751421-43751440 | None:intergenic | 60.0% |
| ! | GAGATTGGTTAGGCGGCACG+TGG | + | chr3.1:43753219-43753238 | MS.gene94918:CDS | 60.0% |
| ! | GCATTGGCGGAGCCACATAG+TGG | + | chr3.1:43751395-43751414 | MS.gene94918:intron | 60.0% |
| !! | CATGGTGGAGTGATGGGTGG+TGG | + | chr3.1:43752758-43752777 | MS.gene94918:CDS | 60.0% |
| !! | GTATCCGAGGCTGCTGGTTC+AGG | + | chr3.1:43750850-43750869 | MS.gene94918:CDS | 60.0% |
| !! | TGGAGTGATGGGTGGTGGGA+GGG | + | chr3.1:43752763-43752782 | MS.gene94918:CDS | 60.0% |
| AACCTGGCCGGTCGACCATC+AGG | + | chr3.1:43752677-43752696 | MS.gene94918:CDS | 65.0% | |
| CGGAGCCACATAGTGGCCAG+GGG | + | chr3.1:43751402-43751421 | MS.gene94918:intron | 65.0% | |
| GAACCGCCGTCGATGCATGG+TGG | + | chr3.1:43752743-43752762 | MS.gene94918:CDS | 65.0% | |
| GCGGAGCCACATAGTGGCCA+GGG | + | chr3.1:43751401-43751420 | MS.gene94918:intron | 65.0% | |
| GGAGCCACATAGTGGCCAGG+GGG | + | chr3.1:43751403-43751422 | MS.gene94918:intron | 65.0% | |
| ! | GAGCTGGCCTGATGGTCGAC+CGG | - | chr3.1:43752687-43752706 | None:intergenic | 65.0% |
| !! | GAGTGATGGGTGGTGGGAGG+GGG | + | chr3.1:43752765-43752784 | MS.gene94918:CDS | 65.0% |
| !! | GGAGTGATGGGTGGTGGGAG+GGG | + | chr3.1:43752764-43752783 | MS.gene94918:CDS | 65.0% |
| !! | GTGGAGTGATGGGTGGTGGG+AGG | + | chr3.1:43752762-43752781 | MS.gene94918:CDS | 65.0% |
| GGCGGAGCCACATAGTGGCC+AGG | + | chr3.1:43751400-43751419 | MS.gene94918:intron | 70.0% | |
| GGCCTGATGGTCGACCGGCC+AGG | - | chr3.1:43752682-43752701 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 43748888 | 43753649 | 43748888 | ID=MS.gene94918 |
| chr3.1 | mRNA | 43748888 | 43753649 | 43748888 | ID=MS.gene94918.t1;Parent=MS.gene94918 |
| chr3.1 | exon | 43748888 | 43749176 | 43748888 | ID=MS.gene94918.t1.exon1;Parent=MS.gene94918.t1 |
| chr3.1 | CDS | 43748888 | 43749176 | 43748888 | ID=cds.MS.gene94918.t1;Parent=MS.gene94918.t1 |
| chr3.1 | exon | 43749718 | 43749803 | 43749718 | ID=MS.gene94918.t1.exon2;Parent=MS.gene94918.t1 |
| chr3.1 | CDS | 43749718 | 43749803 | 43749718 | ID=cds.MS.gene94918.t1;Parent=MS.gene94918.t1 |
| chr3.1 | exon | 43749902 | 43750024 | 43749902 | ID=MS.gene94918.t1.exon3;Parent=MS.gene94918.t1 |
| chr3.1 | CDS | 43749902 | 43750024 | 43749902 | ID=cds.MS.gene94918.t1;Parent=MS.gene94918.t1 |
| chr3.1 | exon | 43750138 | 43750956 | 43750138 | ID=MS.gene94918.t1.exon4;Parent=MS.gene94918.t1 |
| chr3.1 | CDS | 43750138 | 43750956 | 43750138 | ID=cds.MS.gene94918.t1;Parent=MS.gene94918.t1 |
| chr3.1 | exon | 43752625 | 43752841 | 43752625 | ID=MS.gene94918.t1.exon5;Parent=MS.gene94918.t1 |
| chr3.1 | CDS | 43752625 | 43752841 | 43752625 | ID=cds.MS.gene94918.t1;Parent=MS.gene94918.t1 |
| chr3.1 | exon | 43753171 | 43753649 | 43753171 | ID=MS.gene94918.t1.exon6;Parent=MS.gene94918.t1 |
| chr3.1 | CDS | 43753171 | 43753649 | 43753171 | ID=cds.MS.gene94918.t1;Parent=MS.gene94918.t1 |
| Gene Sequence |
| Protein sequence |
