Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95860.t1 | XP_003631017.1 | 96 | 806 | 29 | 1 | 1 | 806 | 2 | 804 | 0.00E+00 | 1286.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95860.t1 | Q8RXF1 | 66.5 | 832 | 206 | 12 | 1 | 806 | 1 | 785 | 9.2e-243 | 841.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95860.t1 | G7LCC6 | 96.0 | 806 | 29 | 1 | 1 | 806 | 2 | 804 | 0.0e+00 | 1286.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052309 | MS.gene95860 | 0.831806 | 1.35E-55 | -1.69E-46 |
| MS.gene052358 | MS.gene95860 | 0.829805 | 4.19E-55 | -1.69E-46 |
| MS.gene052965 | MS.gene95860 | 0.801159 | 1.03E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene95860 | 0.821918 | 3.13E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95860 | MS.gene46271 | PPI |
| MS.gene95860 | MS.gene73791 | PPI |
| MS.gene95860 | MS.gene022734 | PPI |
| MS.gene95860 | MS.gene73790 | PPI |
| MS.gene95860 | MS.gene46269 | PPI |
| MS.gene95860 | MS.gene020229 | PPI |
| MS.gene95860 | MS.gene06946 | PPI |
| MS.gene95860 | MS.gene06729 | PPI |
| MS.gene95860 | MS.gene52116 | PPI |
| MS.gene95860 | MS.gene39316 | PPI |
| MS.gene95860 | MS.gene013796 | PPI |
| MS.gene95860 | MS.gene057666 | PPI |
| MS.gene95860 | MS.gene003478 | PPI |
| MS.gene95860 | MS.gene03206 | PPI |
| MS.gene95860 | MS.gene013607 | PPI |
| MS.gene95860 | MS.gene013791 | PPI |
| MS.gene95860 | MS.gene02577 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95860.t1 | MTR_8g106170 | 97.767 | 806 | 15 | 1 | 1 | 806 | 2 | 804 | 0.0 | 1583 |
| MS.gene95860.t1 | MTR_7g063860 | 81.356 | 472 | 41 | 4 | 337 | 806 | 1 | 427 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95860.t1 | AT1G14650 | 67.888 | 819 | 216 | 13 | 1 | 806 | 1 | 785 | 0.0 | 924 |
| MS.gene95860.t1 | AT1G14650 | 67.888 | 819 | 216 | 13 | 1 | 806 | 1 | 785 | 0.0 | 924 |
| MS.gene95860.t1 | AT1G14650 | 67.888 | 819 | 216 | 13 | 1 | 806 | 1 | 785 | 0.0 | 924 |
| MS.gene95860.t1 | AT1G14640 | 61.004 | 777 | 253 | 15 | 1 | 769 | 1 | 735 | 0.0 | 776 |
| MS.gene95860.t1 | AT1G14640 | 61.004 | 777 | 253 | 15 | 1 | 769 | 1 | 735 | 0.0 | 776 |
| MS.gene95860.t1 | AT4G16200 | 33.333 | 258 | 115 | 4 | 54 | 254 | 10 | 267 | 3.62e-34 | 132 |
| MS.gene95860.t1 | AT5G12280 | 51.034 | 145 | 50 | 3 | 653 | 797 | 294 | 417 | 1.12e-32 | 132 |
| MS.gene95860.t1 | AT5G12280 | 28.352 | 261 | 131 | 9 | 61 | 320 | 89 | 294 | 2.87e-13 | 73.2 |
| MS.gene95860.t1 | AT5G06520 | 34.630 | 257 | 111 | 7 | 59 | 312 | 395 | 597 | 1.82e-32 | 134 |
| MS.gene95860.t1 | AT5G06520 | 25.896 | 251 | 158 | 5 | 68 | 310 | 92 | 322 | 1.88e-14 | 77.8 |
| MS.gene95860.t1 | AT5G06520 | 35.329 | 167 | 84 | 5 | 179 | 343 | 79 | 223 | 3.57e-14 | 77.0 |
| MS.gene95860.t1 | AT5G06890 | 57.333 | 75 | 20 | 3 | 724 | 797 | 2 | 65 | 2.14e-16 | 74.7 |
| MS.gene95860.t1 | AT3G49130 | 36.269 | 193 | 88 | 8 | 136 | 323 | 15 | 177 | 1.51e-15 | 79.0 |
| MS.gene95860.t1 | AT2G43960 | 25.373 | 268 | 156 | 8 | 61 | 319 | 9 | 241 | 8.38e-13 | 72.0 |
| MS.gene95860.t1 | AT3G27600 | 27.200 | 250 | 135 | 9 | 73 | 322 | 2 | 204 | 3.23e-12 | 68.9 |
Find 277 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTGGTTTCTCGAATTT+TGG | 0.123945 | 4.3:-1049114 | None:intergenic |
| GATCCCTGAGGATAAATTTC+TGG | 0.240740 | 4.3:+1049886 | MS.gene95860:CDS |
| ACATCGTTACTATCAGTTTC+TGG | 0.250973 | 4.3:-1048189 | None:intergenic |
| TGTTCTGACATTTCACTAAT+AGG | 0.261909 | 4.3:-1049035 | None:intergenic |
| GCTTCCTCAGGTGGCGGCGG+TGG | 0.262509 | 4.3:-1049803 | None:intergenic |
| CTTTCCTTACTGGTTTAAAC+TGG | 0.265112 | 4.3:-1048242 | None:intergenic |
| TGTTTCTGCCTCTTCGGTTC+TGG | 0.276276 | 4.3:-1049848 | None:intergenic |
| AGCAACCTAAGCAGGTTATA+TGG | 0.279454 | 4.3:+1049261 | MS.gene95860:CDS |
| TTGGTTTCATGAAATGAAAT+TGG | 0.291074 | 4.3:-1048419 | None:intergenic |
| AGCTTCTCTGTCAACCCCTT+TGG | 0.304697 | 4.3:-1048504 | None:intergenic |
| CTTCCTCAGGTGGCGGCGGT+GGG | 0.310077 | 4.3:-1049802 | None:intergenic |
| GGATCAAGTACTTTCCTTAC+TGG | 0.310295 | 4.3:-1048252 | None:intergenic |
| AGGCTTCCTGAAGGCATTAC+AGG | 0.313448 | 4.3:+1048300 | MS.gene95860:CDS |
| CTCAATTTCTGCTTGTTAGC+AGG | 0.319229 | 4.3:-1050180 | None:intergenic |
| TGGTTTCATGAAATGAAATT+GGG | 0.327351 | 4.3:-1048418 | None:intergenic |
| TCTTTCTGTTCTTTGTACTT+AGG | 0.329702 | 4.3:-1049080 | None:intergenic |
| CAAGCAATGTCACAGAATAT+TGG | 0.332342 | 4.3:+1049320 | MS.gene95860:CDS |
| TCAACAATGTTTCTAATGTC+TGG | 0.333016 | 4.3:-1047955 | None:intergenic |
| TCCTCAGGTGGCGGCGGTGG+GGG | 0.333801 | 4.3:-1049800 | None:intergenic |
| AAGGGAAGAAGAGTGAAGTC+AGG | 0.334414 | 4.3:+1048889 | MS.gene95860:CDS |
| ATTGGAAGGCCAATGCTATT+AGG | 0.334626 | 4.3:-1049509 | None:intergenic |
| TAAGGGATTCTGATGATGTT+AGG | 0.341202 | 4.3:+1047754 | None:intergenic |
| ACTTGTCAATCCAGTCAAAA+AGG | 0.342104 | 4.3:-1048379 | None:intergenic |
| TTAAACTGGGCAGAAATATC+AGG | 0.343919 | 4.3:-1048228 | None:intergenic |
| TCCATTTCTACTTCCTTCCC+TGG | 0.346519 | 4.3:-1048798 | None:intergenic |
| TGGTTATTCATAGGAATTGA+TGG | 0.349393 | 4.3:-1049650 | None:intergenic |
| TGACCCTTGAGGAGGTTATA+AGG | 0.349562 | 4.3:+1048736 | MS.gene95860:CDS |
| CAATATTCTGTGACATTGCT+TGG | 0.353663 | 4.3:-1049319 | None:intergenic |
| CCTCACCCTCCTCCACCATC+AGG | 0.353930 | 4.3:+1049734 | MS.gene95860:CDS |
| AGATTTCCTTCATCAACATT+AGG | 0.356214 | 4.3:-1050069 | None:intergenic |
| TCCTCCCCTGTAATGCCTTC+AGG | 0.361482 | 4.3:-1048306 | None:intergenic |
| GTTCTGGTTCCTCTGGAAGC+GGG | 0.364838 | 4.3:-1049832 | None:intergenic |
| GATCCAGGTGGTGGAGGAAT+GGG | 0.366946 | 4.3:-1049680 | None:intergenic |
| GGCACTCCTTGAGGCGGAGG+TGG | 0.370443 | 4.3:-1049779 | None:intergenic |
| ACAATCCTAATCGGTGGTTC+AGG | 0.371459 | 4.3:-1048924 | None:intergenic |
| TCGTCATGTTTCTGCCTCTT+CGG | 0.382991 | 4.3:-1049854 | None:intergenic |
| GTGCTGATAATATGCATGAT+AGG | 0.383722 | 4.3:-1048082 | None:intergenic |
| CACAATTTGTGGCTCGTAAC+GGG | 0.388021 | 4.3:+1048352 | MS.gene95860:CDS |
| CAGTTCTTCACAATCCTAAT+CGG | 0.396930 | 4.3:-1048933 | None:intergenic |
| AAATCTCAAAGGGCAAGTTC+TGG | 0.400007 | 4.3:+1050086 | MS.gene95860:CDS |
| GGCATCTGCATTGGAGGAGG+AGG | 0.400365 | 4.3:-1049581 | None:intergenic |
| AGAGGTTTCCAATGCTGTTA+AGG | 0.406420 | 4.3:+1049214 | MS.gene95860:CDS |
| TGCATTGGAGGAGGAGGGGC+TGG | 0.408585 | 4.3:-1049575 | None:intergenic |
| CCTCCCACTGATGGAAATCT+TGG | 0.411347 | 4.3:+1047805 | MS.gene95860:CDS |
| TTCCTCAGGTGGCGGCGGTG+GGG | 0.412252 | 4.3:-1049801 | None:intergenic |
| CGATTAGGATTGTGAAGAAC+TGG | 0.415914 | 4.3:+1048934 | MS.gene95860:CDS |
| TACAAATGGCTATGATTGAT+TGG | 0.416626 | 4.3:+1048646 | MS.gene95860:CDS |
| TTCTCTGTCAACCCCTTTGG+AGG | 0.417441 | 4.3:-1048501 | None:intergenic |
| ACTCCTTGAGGCGGAGGTGG+TGG | 0.417600 | 4.3:-1049776 | None:intergenic |
| TCTGCAGGAAGCCTGTCTTC+TGG | 0.418705 | 4.3:-1048963 | None:intergenic |
| AGTCCAGGTGGTGGCGGAAG+AGG | 0.422752 | 4.3:-1049437 | None:intergenic |
| GGGGTTCCTTGGTTATTCAT+AGG | 0.422757 | 4.3:-1049659 | None:intergenic |
| CTGCCCAGTTTAAACCAGTA+AGG | 0.427365 | 4.3:+1048238 | MS.gene95860:CDS |
| GGAGGAGGTGCAGCAGGACC+AGG | 0.431521 | 4.3:-1049389 | None:intergenic |
| CTTGCACATTACAATGTTAG+TGG | 0.432552 | 4.3:+1050237 | MS.gene95860:CDS |
| GGAGGTGGTGGATGCATCAT+AGG | 0.433352 | 4.3:-1049764 | None:intergenic |
| CGCTTGGACGGCAATGATGA+AGG | 0.435735 | 4.3:+1048870 | MS.gene95860:CDS |
| GGTTCTGGTTCCTCTGGAAG+CGG | 0.435880 | 4.3:-1049833 | None:intergenic |
| CCATTCCCTCTTTAACAAGC+TGG | 0.436500 | 4.3:-1048839 | None:intergenic |
| CCAGGTCTTGGTGGAGGCAT+TGG | 0.437144 | 4.3:-1049527 | None:intergenic |
| AAAGCTTACAGCACAATTTG+TGG | 0.438188 | 4.3:+1048341 | MS.gene95860:CDS |
| CTCTTCGGTTCTGGTTCCTC+TGG | 0.439569 | 4.3:-1049839 | None:intergenic |
| TAGAGATTCAACCAAGTTTG+TGG | 0.441618 | 4.3:+1048986 | MS.gene95860:CDS |
| AGATCCAGGTGGTGGAGGAA+TGG | 0.444234 | 4.3:-1049681 | None:intergenic |
| TAGGAATTGATGGATGCATT+GGG | 0.444523 | 4.3:-1049640 | None:intergenic |
| TCTTGAGTGAGTTGAGCCTC+AGG | 0.446101 | 4.3:-1047835 | None:intergenic |
| AAGACCCTGAACCACCGATT+AGG | 0.451674 | 4.3:+1048919 | MS.gene95860:CDS |
| GATTGCATCATGTGCATGCC+AGG | 0.454391 | 4.3:-1049545 | None:intergenic |
| GCAACCTAAGCAGGTTATAT+GGG | 0.454626 | 4.3:+1049262 | MS.gene95860:CDS |
| AAAACATTGTTGGACTTGCT+CGG | 0.455205 | 4.3:+1049159 | MS.gene95860:CDS |
| CCACCAGGCATCTGCATTGG+AGG | 0.455548 | 4.3:-1049587 | None:intergenic |
| AATTTCAGCCTTAACAGCAT+TGG | 0.456041 | 4.3:-1049222 | None:intergenic |
| GGAGCATAAGGTCGTGGAAC+AGG | 0.458312 | 4.3:-1049713 | None:intergenic |
| TTGGAGGAGGAGGGGCTGGC+CGG | 0.461945 | 4.3:-1049571 | None:intergenic |
| GAAGAAGATACCGTTGAGCC+AGG | 0.465828 | 4.3:+1048780 | MS.gene95860:CDS |
| GGAATCAGTTCACCGGTGAT+AGG | 0.466222 | 4.3:-1049014 | None:intergenic |
| CCTCCTCCAATGCAGATGCC+TGG | 0.466446 | 4.3:+1049584 | MS.gene95860:CDS |
| GCCAGGGAAGGAAGTAGAAA+TGG | 0.466913 | 4.3:+1048797 | MS.gene95860:CDS |
| GAAGGAAGTAGAAATGGAAA+TGG | 0.467583 | 4.3:+1048803 | MS.gene95860:CDS |
| ATCATGTGCATGCCAGGTCT+TGG | 0.468081 | 4.3:-1049539 | None:intergenic |
| TCTGCTTGTTAGCAGGGAGT+TGG | 0.468431 | 4.3:-1050173 | None:intergenic |
| ATCATCCCTGATGGTGGAGG+AGG | 0.469881 | 4.3:-1049740 | None:intergenic |
| GGTCTTGGAGGAGGTGCAGC+AGG | 0.470671 | 4.3:-1049395 | None:intergenic |
| CAATCTTCTACTCAACAACC+TGG | 0.470871 | 4.3:+1048132 | MS.gene95860:CDS |
| TCAATTTCTGCTTGTTAGCA+GGG | 0.474049 | 4.3:-1050179 | None:intergenic |
| GGAGGAGGGTGAGGAGCATA+AGG | 0.475146 | 4.3:-1049725 | None:intergenic |
| GCCACACACACTAGAACTAT+AGG | 0.476734 | 4.3:+1047916 | MS.gene95860:CDS |
| AGGCATTACAGGGGAGGAGC+TGG | 0.482536 | 4.3:+1048311 | MS.gene95860:CDS |
| CATTCCCTCTTTAACAAGCT+GGG | 0.482811 | 4.3:-1048838 | None:intergenic |
| CCATCCCATATAACCTGCTT+AGG | 0.482921 | 4.3:-1049266 | None:intergenic |
| GTGAGTTGAGCCTCAGGGAG+AGG | 0.483119 | 4.3:-1047829 | None:intergenic |
| TAAATTTCTGGCTCAGCATC+CGG | 0.483958 | 4.3:+1049898 | MS.gene95860:CDS |
| AGAGCAAGAAAGAATACAAA+TGG | 0.484421 | 4.3:+1048632 | MS.gene95860:CDS |
| CGTCCTCTTCCGCCACCACC+TGG | 0.485094 | 4.3:+1049434 | MS.gene95860:CDS |
| ATATTGTCCTTGAGAAAGCC+TGG | 0.486427 | 4.3:-1050210 | None:intergenic |
| GGAGCTTCCTCAGGTGGCGG+CGG | 0.486510 | 4.3:-1049806 | None:intergenic |
| AGAGGCCCAGCTTGTTAAAG+AGG | 0.486869 | 4.3:+1048833 | MS.gene95860:CDS |
| TCAAGCACGGTAGCCATGTC+GGG | 0.487343 | 4.3:-1048540 | None:intergenic |
| TGTCGGTGTTTCTTCCTCGA+TGG | 0.488894 | 4.3:-1047887 | None:intergenic |
| TCTCAGTTCGTTGCTAAGAA+TGG | 0.490258 | 4.3:+1047985 | MS.gene95860:CDS |
| ACTGTATACTGCTCAGCCTC+AGG | 0.491545 | 4.3:-1048276 | None:intergenic |
| GGAGGAGCTTCCTCAGGTGG+CGG | 0.491552 | 4.3:-1049809 | None:intergenic |
| CCTGATGGTGGAGGAGGGTG+AGG | 0.492235 | 4.3:-1049734 | None:intergenic |
| GGGAATGGATGCTGTTCGCT+TGG | 0.492256 | 4.3:+1048854 | MS.gene95860:CDS |
| AACTGAGATCCAGGTGGTGG+AGG | 0.493314 | 4.3:-1049686 | None:intergenic |
| TTCTGGTTCCTCTGGAAGCG+GGG | 0.494469 | 4.3:-1049831 | None:intergenic |
| AAATGATGAGCAACCTAAGC+AGG | 0.494557 | 4.3:+1049253 | MS.gene95860:CDS |
| AGGATTATCGCTAGTAATGC+GGG | 0.497434 | 4.3:+1048024 | MS.gene95860:CDS |
| TTTCCATCAGTGGGAGGAGC+GGG | 0.498622 | 4.3:-1047799 | None:intergenic |
| TACTTCCTTCCCTGGCTCAA+CGG | 0.498862 | 4.3:-1048790 | None:intergenic |
| ATAGGAATTGATGGATGCAT+TGG | 0.501574 | 4.3:-1049641 | None:intergenic |
| GGACGAACTGAAGGCATACC+AGG | 0.501660 | 4.3:-1049416 | None:intergenic |
| GGAGCGGGTAAAGGCAGTAT+AGG | 0.501929 | 4.3:-1047784 | None:intergenic |
| TTGGTTGAATCTCTATCTGC+AGG | 0.504250 | 4.3:-1048978 | None:intergenic |
| CAATCCTAATCGGTGGTTCA+GGG | 0.505409 | 4.3:-1048923 | None:intergenic |
| TTCTCCTTATAACCTCCTCA+AGG | 0.506795 | 4.3:-1048740 | None:intergenic |
| TGAGCCAGAAATTTATCCTC+AGG | 0.508604 | 4.3:-1049890 | None:intergenic |
| ATGTGCATGCCAGGTCTTGG+TGG | 0.509096 | 4.3:-1049536 | None:intergenic |
| GCATCTGCATTGGAGGAGGA+GGG | 0.511428 | 4.3:-1049580 | None:intergenic |
| TCCTCAAGGGTCATCGGAGG+AGG | 0.511903 | 4.3:-1048726 | None:intergenic |
| ACAGGAGTGAACTGAGATCC+AGG | 0.513045 | 4.3:-1049695 | None:intergenic |
| TTACTATCAGTTTCTGGCGC+AGG | 0.513316 | 4.3:-1048183 | None:intergenic |
| AGTAGAAATGGAAATGGATG+AGG | 0.515451 | 4.3:+1048809 | MS.gene95860:CDS |
| CTATCAGTTTCTGGCGCAGG+TGG | 0.516657 | 4.3:-1048180 | None:intergenic |
| TCAGTGGGAGGAGCGGGTAA+AGG | 0.517550 | 4.3:-1047793 | None:intergenic |
| TCTGTTCCTAATGTTGATGA+AGG | 0.520094 | 4.3:+1050063 | MS.gene95860:CDS |
| AATGGAAATGGATGAGGAAG+AGG | 0.520372 | 4.3:+1048815 | MS.gene95860:CDS |
| CCTTGCCGATGCATATTCAA+AGG | 0.520439 | 4.3:+1048470 | MS.gene95860:CDS |
| CAAAATTCGAGAAACCACTT+TGG | 0.520666 | 4.3:+1049115 | MS.gene95860:CDS |
| CGGTGTTTCTTCCTCGATGG+AGG | 0.522913 | 4.3:-1047884 | None:intergenic |
| TTACCCGCTCCTCCCACTGA+TGG | 0.523195 | 4.3:+1047796 | MS.gene95860:CDS |
| TCGAGAAACCACTTTGGCAC+AGG | 0.523521 | 4.3:+1049121 | MS.gene95860:CDS |
| TTCAAGCACGGTAGCCATGT+CGG | 0.524285 | 4.3:-1048541 | None:intergenic |
| CTCAAGAGGAGGTGGAGGAG+AGG | 0.526883 | 4.3:+1047851 | MS.gene95860:CDS |
| ATGGATGCTGTTCGCTTGGA+CGG | 0.528226 | 4.3:+1048858 | MS.gene95860:CDS |
| TGAGTTGAGCCTCAGGGAGA+GGG | 0.529205 | 4.3:-1047828 | None:intergenic |
| ACATTGCTTGGTTTGCAGTA+CGG | 0.529795 | 4.3:-1049307 | None:intergenic |
| TGGATTGAGGAAATTAAACT+TGG | 0.530219 | 4.3:-1048052 | None:intergenic |
| CTCACCCTCCTCCACCATCA+GGG | 0.533364 | 4.3:+1049735 | MS.gene95860:CDS |
| TATTCTAATCCTAATAGCAT+TGG | 0.533446 | 4.3:+1049500 | MS.gene95860:CDS |
| GAAGGCATACCAGGTCTTGG+AGG | 0.534350 | 4.3:-1049407 | None:intergenic |
| CATCTGCATTGGAGGAGGAG+GGG | 0.535322 | 4.3:-1049579 | None:intergenic |
| GATGTGTGAATAGGCTGGAA+TGG | 0.536148 | 4.3:+1048565 | MS.gene95860:CDS |
| ACTGAAGGCATACCAGGTCT+TGG | 0.536230 | 4.3:-1049410 | None:intergenic |
| GGTTTCATGAAATGAAATTG+GGG | 0.538125 | 4.3:-1048417 | None:intergenic |
| TCCTATAGTTCTAGTGTGTG+TGG | 0.538991 | 4.3:-1047917 | None:intergenic |
| GATAGGGATCGGATGGATTG+AGG | 0.539119 | 4.3:-1048065 | None:intergenic |
| ATGGTCTTGAATTCGAAAAG+AGG | 0.539264 | 4.3:+1048004 | MS.gene95860:CDS |
| ACAAGAGCAAGCTAGGCAAA+AGG | 0.539404 | 4.3:+1048596 | MS.gene95860:CDS |
| TGTCCACCAGGCATCTGCAT+TGG | 0.540056 | 4.3:-1049590 | None:intergenic |
| GATAGGAGAAACCACAAACT+TGG | 0.541207 | 4.3:-1048997 | None:intergenic |
| GAGGAGGTGCAGCAGGACCA+GGG | 0.541548 | 4.3:-1049388 | None:intergenic |
| GGGTGAGGAGCATAAGGTCG+TGG | 0.541806 | 4.3:-1049719 | None:intergenic |
| GGGTGGTTGACCACCCATCA+TGG | 0.542510 | 4.3:-1049618 | None:intergenic |
| CCAATGCCTCCACCAAGACC+TGG | 0.544824 | 4.3:+1049527 | MS.gene95860:CDS |
| AGGCTGAGCAGTATACAGTT+AGG | 0.544863 | 4.3:+1048280 | MS.gene95860:CDS |
| AGGGAAGAAGAGTGAAGTCA+GGG | 0.544952 | 4.3:+1048890 | MS.gene95860:CDS |
| CAGAAATTGAGTGGAAAACC+AGG | 0.545592 | 4.3:+1050192 | MS.gene95860:CDS |
| TGCACATGATGCAATCTCTC+CGG | 0.546274 | 4.3:+1049552 | MS.gene95860:CDS |
| TTTGTGGTTTCTCCTATCAC+CGG | 0.546292 | 4.3:+1049002 | MS.gene95860:CDS |
| TTTGACTGGATTGACAAGTA+GGG | 0.547049 | 4.3:+1048383 | MS.gene95860:CDS |
| ATCATGCATATTATCAGCAC+AGG | 0.547508 | 4.3:+1048085 | MS.gene95860:CDS |
| AATGTAAACATGCTGTGAGT+TGG | 0.547838 | 4.3:-1048438 | None:intergenic |
| GGCTTCCTGAAGGCATTACA+GGG | 0.548226 | 4.3:+1048301 | MS.gene95860:CDS |
| CACCACGCTCTCTCAAGGCT+AGG | 0.548324 | 4.3:-1050275 | None:intergenic |
| ATCCAGGTGGTGGAGGAATG+GGG | 0.549215 | 4.3:-1049679 | None:intergenic |
| TTGATGAAGGAAATCTCAAA+GGG | 0.550388 | 4.3:+1050076 | MS.gene95860:CDS |
| CCAGGCATCTGCATTGGAGG+AGG | 0.550786 | 4.3:-1049584 | None:intergenic |
| GTGAACTGAGATCCAGGTGG+TGG | 0.552277 | 4.3:-1049689 | None:intergenic |
| GAGAAGCAAGATGACGCTCA+TGG | 0.552684 | 4.3:+1048758 | MS.gene95860:CDS |
| TTCATCATCCTGTGCCAAAG+TGG | 0.553580 | 4.3:-1049129 | None:intergenic |
| ATGTTTCTAATGTCTGGAGG+GGG | 0.553778 | 4.3:-1047949 | None:intergenic |
| ATAACCTCCTCAAGGGTCAT+CGG | 0.554958 | 4.3:-1048732 | None:intergenic |
| TGCATGCCAGGTCTTGGTGG+AGG | 0.556352 | 4.3:-1049533 | None:intergenic |
| CATGTTATGCATAGGCCCAC+GGG | 0.557167 | 4.3:-1049474 | None:intergenic |
| TATGCATGATAGGGATCGGA+TGG | 0.558648 | 4.3:-1048072 | None:intergenic |
| CAATGTTTCTAATGTCTGGA+GGG | 0.560753 | 4.3:-1047951 | None:intergenic |
| ACTGGAAGAGACCAGAAGAC+AGG | 0.560860 | 4.3:+1048952 | MS.gene95860:CDS |
| GTTGATGAAGGAAATCTCAA+AGG | 0.560862 | 4.3:+1050075 | MS.gene95860:CDS |
| GGCATACCAGGTCTTGGAGG+AGG | 0.561127 | 4.3:-1049404 | None:intergenic |
| GTGTGTGTGGCAACAGTTGT+CGG | 0.561561 | 4.3:-1047904 | None:intergenic |
| TCAACTCACTCAAGAGGAGG+TGG | 0.562226 | 4.3:+1047843 | MS.gene95860:CDS |
| CCAGCTTGTTAAAGAGGGAA+TGG | 0.563367 | 4.3:+1048839 | MS.gene95860:CDS |
| TCTGGTTCCTCTGGAAGCGG+GGG | 0.564783 | 4.3:-1049830 | None:intergenic |
| AAAGCTAGTCCAGGTGGTGG+CGG | 0.566441 | 4.3:-1049443 | None:intergenic |
| ACTCACTCAAGAGGAGGTGG+AGG | 0.566569 | 4.3:+1047846 | MS.gene95860:CDS |
| GCACAATTTGTGGCTCGTAA+CGG | 0.567217 | 4.3:+1048351 | MS.gene95860:CDS |
| TGAAAGATGTGTGAATAGGC+TGG | 0.567577 | 4.3:+1048560 | MS.gene95860:CDS |
| GGCATCATCCCTGATGGTGG+AGG | 0.567611 | 4.3:-1049743 | None:intergenic |
| GAATATTGCATGTTATGCAT+AGG | 0.567763 | 4.3:-1049482 | None:intergenic |
| AGCGTTCACAAGAGCAAGCT+AGG | 0.568094 | 4.3:+1048589 | MS.gene95860:CDS |
| TCTACCACCACGCTCTCTCA+AGG | 0.569307 | 4.3:-1050280 | None:intergenic |
| ATCATGGAATGTTGTCCACC+AGG | 0.571946 | 4.3:-1049602 | None:intergenic |
| GATGGTCACAGTGGTAGTAT+TGG | 0.574108 | 4.3:+1049284 | MS.gene95860:CDS |
| GCATGTTATGCATAGGCCCA+CGG | 0.576194 | 4.3:-1049475 | None:intergenic |
| TGCTGATAATATGCATGATA+GGG | 0.577580 | 4.3:-1048081 | None:intergenic |
| ATGTGTGAATAGGCTGGAAT+GGG | 0.578972 | 4.3:+1048566 | MS.gene95860:CDS |
| TCCAGGTGGTGGAGGAATGG+GGG | 0.580559 | 4.3:-1049678 | None:intergenic |
| ATAATATGCATGATAGGGAT+CGG | 0.580636 | 4.3:-1048076 | None:intergenic |
| GTTCTCTACAGGGACCTGCT+CGG | 0.580926 | 4.3:+1050031 | MS.gene95860:intron |
| CATCCACCACCTCCGCCTCA+AGG | 0.581195 | 4.3:+1049773 | MS.gene95860:CDS |
| AATCTTCTACTCAACAACCT+GGG | 0.581999 | 4.3:+1048133 | MS.gene95860:CDS |
| CAATCTCTGTCTGAAACTGT+TGG | 0.583138 | 4.3:+1050120 | MS.gene95860:CDS |
| GCTTGGACGGCAATGATGAA+GGG | 0.583265 | 4.3:+1048871 | MS.gene95860:CDS |
| TGCTTGAAAGATGTGTGAAT+AGG | 0.583530 | 4.3:+1048556 | MS.gene95860:CDS |
| GGCGGAAGAGGACGAACTGA+AGG | 0.584239 | 4.3:-1049425 | None:intergenic |
| GCTGCACCTCCTCCAAGACC+TGG | 0.589894 | 4.3:+1049398 | MS.gene95860:CDS |
| CCTAAGCAGGTTATATGGGA+TGG | 0.590606 | 4.3:+1049266 | MS.gene95860:CDS |
| AGCATTGGAAACCTCTTCCT+CGG | 0.590624 | 4.3:-1049207 | None:intergenic |
| CAAAACCTTTGAATATGCAT+CGG | 0.591581 | 4.3:-1048475 | None:intergenic |
| GGGCCAAGATTTCCATCAGT+GGG | 0.591807 | 4.3:-1047808 | None:intergenic |
| ACCACGCTCTCTCAAGGCTA+GGG | 0.592917 | 4.3:-1050274 | None:intergenic |
| GTCTTGGTGGAGGCATTGGA+AGG | 0.593881 | 4.3:-1049523 | None:intergenic |
| TGGTGGACAACATTCCATGA+TGG | 0.593958 | 4.3:+1049604 | MS.gene95860:CDS |
| TTCAAAGCTAGTCCAGGTGG+TGG | 0.596324 | 4.3:-1049446 | None:intergenic |
| GTCACAGAATATTGGAAGTG+AGG | 0.597524 | 4.3:+1049328 | MS.gene95860:CDS |
| ACAGATATACTGATCCGAGC+AGG | 0.598888 | 4.3:-1050045 | None:intergenic |
| GGTAGATTCAAAGCTAGTCC+AGG | 0.601016 | 4.3:-1049452 | None:intergenic |
| ACAATGTTTCTAATGTCTGG+AGG | 0.601626 | 4.3:-1047952 | None:intergenic |
| AATGTTTCTAATGTCTGGAG+GGG | 0.603125 | 4.3:-1047950 | None:intergenic |
| AGATACCGTTGAGCCAGGGA+AGG | 0.606017 | 4.3:+1048785 | MS.gene95860:CDS |
| TGAAACTGTTGGCAGCCTGA+AGG | 0.606065 | 4.3:+1050131 | MS.gene95860:CDS |
| CTTGAGTGAGTTGAGCCTCA+GGG | 0.607717 | 4.3:-1047834 | None:intergenic |
| TTCTTCACAATCCTAATCGG+TGG | 0.607876 | 4.3:-1048930 | None:intergenic |
| ACTAATAGGAATCAGTTCAC+CGG | 0.608792 | 4.3:-1049021 | None:intergenic |
| CCTCCAATGCAGATGCCTGG+TGG | 0.609030 | 4.3:+1049587 | MS.gene95860:CDS |
| CTTTGAATATGCATCGGCAA+GGG | 0.609693 | 4.3:-1048469 | None:intergenic |
| TCCTGAAGGCATTACAGGGG+AGG | 0.611198 | 4.3:+1048305 | MS.gene95860:CDS |
| TTTCCTTACTGGTTTAAACT+GGG | 0.611741 | 4.3:-1048241 | None:intergenic |
| TGGAAAACCAGGCTTTCTCA+AGG | 0.613141 | 4.3:+1050203 | MS.gene95860:CDS |
| GGTGGACAACATTCCATGAT+GGG | 0.613612 | 4.3:+1049605 | MS.gene95860:CDS |
| CCTTTGAATATGCATCGGCA+AGG | 0.614216 | 4.3:-1048470 | None:intergenic |
| TGAGGCTCAACTCACTCAAG+AGG | 0.614613 | 4.3:+1047837 | MS.gene95860:CDS |
| ATTTCCATCAGTGGGAGGAG+CGG | 0.614809 | 4.3:-1047800 | None:intergenic |
| TCCCTAGCCTTGAGAGAGCG+TGG | 0.616920 | 4.3:+1050273 | MS.gene95860:CDS |
| ATCATAGGCATCATCCCTGA+TGG | 0.617198 | 4.3:-1049749 | None:intergenic |
| GGAATTGATGGATGCATTGG+GGG | 0.617363 | 4.3:-1049638 | None:intergenic |
| TCTAGTAGAGCAGAATCCCC+AGG | 0.618285 | 4.3:-1048150 | None:intergenic |
| GAGGCCCAGCTTGTTAAAGA+GGG | 0.618696 | 4.3:+1048834 | MS.gene95860:CDS |
| GCTAACAAGCAGAAATTGAG+TGG | 0.618988 | 4.3:+1050183 | MS.gene95860:CDS |
| GAGGATTATCGCTAGTAATG+CGG | 0.622030 | 4.3:+1048023 | MS.gene95860:CDS |
| ATAGGCATCATCCCTGATGG+TGG | 0.623826 | 4.3:-1049746 | None:intergenic |
| GTTTCATGAAATGAAATTGG+GGG | 0.624393 | 4.3:-1048416 | None:intergenic |
| TCATCCCTGATGGTGGAGGA+GGG | 0.624606 | 4.3:-1049739 | None:intergenic |
| TAGCTTTGAATCTACCCCGT+GGG | 0.625593 | 4.3:+1049459 | MS.gene95860:CDS |
| GGCTCAACTCACTCAAGAGG+AGG | 0.625843 | 4.3:+1047840 | MS.gene95860:CDS |
| ATTCACACATCTTTCAAGCA+CGG | 0.630916 | 4.3:-1048553 | None:intergenic |
| AGGAATTGATGGATGCATTG+GGG | 0.631433 | 4.3:-1049639 | None:intergenic |
| ATCTTCTACTCAACAACCTG+GGG | 0.633425 | 4.3:+1048134 | MS.gene95860:CDS |
| GCACATTACAATGTTAGTGG+AGG | 0.635245 | 4.3:+1050240 | MS.gene95860:CDS |
| TCAATTCCTATGAATAACCA+AGG | 0.636807 | 4.3:+1049653 | MS.gene95860:CDS |
| AAATCTTGGCCCTCTCCCTG+AGG | 0.637689 | 4.3:+1047819 | MS.gene95860:CDS |
| GAGCCAGAAATTTATCCTCA+GGG | 0.639239 | 4.3:-1049889 | None:intergenic |
| AGGGCCAAGATTTCCATCAG+TGG | 0.639548 | 4.3:-1047809 | None:intergenic |
| CAGAGGAACCAGAACCGAAG+AGG | 0.642537 | 4.3:+1049840 | MS.gene95860:CDS |
| GTATACTGCTCAGCCTCAGG+AGG | 0.644159 | 4.3:-1048273 | None:intergenic |
| TCCTCCGATGACCCTTGAGG+AGG | 0.644190 | 4.3:+1048728 | MS.gene95860:CDS |
| ACCTCCTCAAGGGTCATCGG+AGG | 0.653141 | 4.3:-1048729 | None:intergenic |
| AAGAAGATACCGTTGAGCCA+GGG | 0.654040 | 4.3:+1048781 | MS.gene95860:CDS |
| ACCTCCTCCGATGACCCTTG+AGG | 0.658282 | 4.3:+1048725 | MS.gene95860:CDS |
| TCTCCTTATAACCTCCTCAA+GGG | 0.658954 | 4.3:-1048739 | None:intergenic |
| GAAAGTACTTGATCCTCCTG+AGG | 0.667068 | 4.3:+1048260 | MS.gene95860:CDS |
| CGATTCTGCTCTGATCCCTG+AGG | 0.667531 | 4.3:+1049874 | MS.gene95860:CDS |
| CCAAGATTTCCATCAGTGGG+AGG | 0.670695 | 4.3:-1047805 | None:intergenic |
| TATACAGTTAGGCTTCCTGA+AGG | 0.674309 | 4.3:+1048291 | MS.gene95860:CDS |
| ATTCTTAGCAACGAACTGAG+AGG | 0.675573 | 4.3:-1047983 | None:intergenic |
| TGTTTCTAATGTCTGGAGGG+GGG | 0.689288 | 4.3:-1047948 | None:intergenic |
| CTAGCCTTGAGAGAGCGTGG+TGG | 0.691451 | 4.3:+1050276 | MS.gene95860:CDS |
| CTAGCTTTGAATCTACCCCG+TGG | 0.691585 | 4.3:+1049458 | MS.gene95860:CDS |
| AGATTCAAAGCTAGTCCAGG+TGG | 0.698870 | 4.3:-1049449 | None:intergenic |
| GCTTCCTGAAGGCATTACAG+GGG | 0.699681 | 4.3:+1048302 | MS.gene95860:CDS |
| GTTATATGGGATGGTCACAG+TGG | 0.709630 | 4.3:+1049275 | MS.gene95860:CDS |
| GAGGTGCAGCAGGACCAGGG+AGG | 0.710329 | 4.3:-1049385 | None:intergenic |
| GAATGAGAGATCCTCCATCG+AGG | 0.720923 | 4.3:+1047873 | MS.gene95860:CDS |
| GGACAACATTCCATGATGGG+TGG | 0.739617 | 4.3:+1049608 | MS.gene95860:CDS |
| ATGTTATGCATAGGCCCACG+GGG | 0.746373 | 4.3:-1049473 | None:intergenic |
| GGAGTGAACTGAGATCCAGG+TGG | 0.837933 | 4.3:-1049692 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAATATAAATGTATAAT+TGG | - | chr4.3:1049974-1049993 | None:intergenic | 10.0% |
| !! | TAATATAAATGTATAATTGG+TGG | - | chr4.3:1049971-1049990 | None:intergenic | 15.0% |
| ! | GAAATCTCAAAAAACATTGT+TGG | + | chr4.3:1049149-1049168 | MS.gene95860:CDS | 25.0% |
| ! | TATTCTAATCCTAATAGCAT+TGG | + | chr4.3:1049500-1049519 | MS.gene95860:CDS | 25.0% |
| ! | TGGTTTCATGAAATGAAATT+GGG | - | chr4.3:1048421-1048440 | None:intergenic | 25.0% |
| ! | TTGGTTTCATGAAATGAAAT+TGG | - | chr4.3:1048422-1048441 | None:intergenic | 25.0% |
| AGAGCAAGAAAGAATACAAA+TGG | + | chr4.3:1048632-1048651 | MS.gene95860:CDS | 30.0% | |
| AGATTTCCTTCATCAACATT+AGG | - | chr4.3:1050072-1050091 | None:intergenic | 30.0% | |
| ATAATATGCATGATAGGGAT+CGG | - | chr4.3:1048079-1048098 | None:intergenic | 30.0% | |
| CAAAACCTTTGAATATGCAT+CGG | - | chr4.3:1048478-1048497 | None:intergenic | 30.0% | |
| GAATATTGCATGTTATGCAT+AGG | - | chr4.3:1049485-1049504 | None:intergenic | 30.0% | |
| GGTTTCATGAAATGAAATTG+GGG | - | chr4.3:1048420-1048439 | None:intergenic | 30.0% | |
| GTTTCATGAAATGAAATTGG+GGG | - | chr4.3:1048419-1048438 | None:intergenic | 30.0% | |
| TACAAATGGCTATGATTGAT+TGG | + | chr4.3:1048646-1048665 | MS.gene95860:CDS | 30.0% | |
| TCAATTCCTATGAATAACCA+AGG | + | chr4.3:1049653-1049672 | MS.gene95860:CDS | 30.0% | |
| TCTTTCTGTTCTTTGTACTT+AGG | - | chr4.3:1049083-1049102 | None:intergenic | 30.0% | |
| TGCTGATAATATGCATGATA+GGG | - | chr4.3:1048084-1048103 | None:intergenic | 30.0% | |
| TGGATTGAGGAAATTAAACT+TGG | - | chr4.3:1048055-1048074 | None:intergenic | 30.0% | |
| TGGTTATTCATAGGAATTGA+TGG | - | chr4.3:1049653-1049672 | None:intergenic | 30.0% | |
| TGTTCTGACATTTCACTAAT+AGG | - | chr4.3:1049038-1049057 | None:intergenic | 30.0% | |
| TTGATGAAGGAAATCTCAAA+GGG | + | chr4.3:1050076-1050095 | MS.gene95860:CDS | 30.0% | |
| ! | TCAACAATGTTTCTAATGTC+TGG | - | chr4.3:1047958-1047977 | None:intergenic | 30.0% |
| !! | TTTCCTTACTGGTTTAAACT+GGG | - | chr4.3:1048244-1048263 | None:intergenic | 30.0% |
| AAAGCTTACAGCACAATTTG+TGG | + | chr4.3:1048341-1048360 | MS.gene95860:CDS | 35.0% | |
| AATCTTCTACTCAACAACCT+GGG | + | chr4.3:1048133-1048152 | MS.gene95860:CDS | 35.0% | |
| AATGAATCTAAAAACCTCCC+TGG | + | chr4.3:1049371-1049390 | MS.gene95860:CDS | 35.0% | |
| AATGTAAACATGCTGTGAGT+TGG | - | chr4.3:1048441-1048460 | None:intergenic | 35.0% | |
| AATTTCAGCCTTAACAGCAT+TGG | - | chr4.3:1049225-1049244 | None:intergenic | 35.0% | |
| ACATCGTTACTATCAGTTTC+TGG | - | chr4.3:1048192-1048211 | None:intergenic | 35.0% | |
| ACTAATAGGAATCAGTTCAC+CGG | - | chr4.3:1049024-1049043 | None:intergenic | 35.0% | |
| ACTTGTCAATCCAGTCAAAA+AGG | - | chr4.3:1048382-1048401 | None:intergenic | 35.0% | |
| AGTAGAAATGGAAATGGATG+AGG | + | chr4.3:1048809-1048828 | MS.gene95860:CDS | 35.0% | |
| ATCAAAGTAACTCTCCATAC+CGG | - | chr4.3:1049920-1049939 | None:intergenic | 35.0% | |
| ATCATGCATATTATCAGCAC+AGG | + | chr4.3:1048085-1048104 | MS.gene95860:CDS | 35.0% | |
| ATTCACACATCTTTCAAGCA+CGG | - | chr4.3:1048556-1048575 | None:intergenic | 35.0% | |
| CAAAATTCGAGAAACCACTT+TGG | + | chr4.3:1049115-1049134 | MS.gene95860:CDS | 35.0% | |
| CAAGCAATGTCACAGAATAT+TGG | + | chr4.3:1049320-1049339 | MS.gene95860:CDS | 35.0% | |
| CAATATTCTGTGACATTGCT+TGG | - | chr4.3:1049322-1049341 | None:intergenic | 35.0% | |
| CAGTTCTTCACAATCCTAAT+CGG | - | chr4.3:1048936-1048955 | None:intergenic | 35.0% | |
| CTTGCACATTACAATGTTAG+TGG | + | chr4.3:1050237-1050256 | MS.gene95860:CDS | 35.0% | |
| GAAGGAAGTAGAAATGGAAA+TGG | + | chr4.3:1048803-1048822 | MS.gene95860:CDS | 35.0% | |
| TAGAGATTCAACCAAGTTTG+TGG | + | chr4.3:1048986-1049005 | MS.gene95860:CDS | 35.0% | |
| TCGGTAGTACCAAAAATATC+AGG | - | chr4.3:1049191-1049210 | None:intergenic | 35.0% | |
| TGCTTGAAAGATGTGTGAAT+AGG | + | chr4.3:1048556-1048575 | MS.gene95860:CDS | 35.0% | |
| TTAAACTGGGCAGAAATATC+AGG | - | chr4.3:1048231-1048250 | None:intergenic | 35.0% | |
| TTTGACTGGATTGACAAGTA+GGG | + | chr4.3:1048383-1048402 | MS.gene95860:CDS | 35.0% | |
| ! | AAAACATTGTTGGACTTGCT+CGG | + | chr4.3:1049159-1049178 | MS.gene95860:CDS | 35.0% |
| ! | AATAGATTTTGCTGACGATG+AGG | + | chr4.3:1048692-1048711 | MS.gene95860:CDS | 35.0% |
| ! | AATGTTTCTAATGTCTGGAG+GGG | - | chr4.3:1047953-1047972 | None:intergenic | 35.0% |
| ! | ACAATGTTTCTAATGTCTGG+AGG | - | chr4.3:1047955-1047974 | None:intergenic | 35.0% |
| ! | ATAGGAATTGATGGATGCAT+TGG | - | chr4.3:1049644-1049663 | None:intergenic | 35.0% |
| ! | ATGGTCTTGAATTCGAAAAG+AGG | + | chr4.3:1048004-1048023 | MS.gene95860:CDS | 35.0% |
| ! | CAAAGTGGTTTCTCGAATTT+TGG | - | chr4.3:1049117-1049136 | None:intergenic | 35.0% |
| ! | CAATGTTTCTAATGTCTGGA+GGG | - | chr4.3:1047954-1047973 | None:intergenic | 35.0% |
| ! | GATTGATTGGCATGATTTTG+TGG | + | chr4.3:1048659-1048678 | MS.gene95860:CDS | 35.0% |
| ! | GTGCTGATAATATGCATGAT+AGG | - | chr4.3:1048085-1048104 | None:intergenic | 35.0% |
| ! | GTTGATGAAGGAAATCTCAA+AGG | + | chr4.3:1050075-1050094 | MS.gene95860:CDS | 35.0% |
| ! | TAGGAATTGATGGATGCATT+GGG | - | chr4.3:1049643-1049662 | None:intergenic | 35.0% |
| ! | TCAATTTCTGCTTGTTAGCA+GGG | - | chr4.3:1050182-1050201 | None:intergenic | 35.0% |
| ! | TCTGTTCCTAATGTTGATGA+AGG | + | chr4.3:1050063-1050082 | MS.gene95860:CDS | 35.0% |
| !! | CTTTCCTTACTGGTTTAAAC+TGG | - | chr4.3:1048245-1048264 | None:intergenic | 35.0% |
| !! | TTTTGACTGGATTGACAAGT+AGG | + | chr4.3:1048382-1048401 | MS.gene95860:CDS | 35.0% |
| !!! | TGATATTTTTGGTACTACCG+AGG | + | chr4.3:1049190-1049209 | MS.gene95860:CDS | 35.0% |
| AAATCTCAAAGGGCAAGTTC+TGG | + | chr4.3:1050086-1050105 | MS.gene95860:CDS | 40.0% | |
| AAATGATGAGCAACCTAAGC+AGG | + | chr4.3:1049253-1049272 | MS.gene95860:CDS | 40.0% | |
| AATGGAAATGGATGAGGAAG+AGG | + | chr4.3:1048815-1048834 | MS.gene95860:CDS | 40.0% | |
| AGAGGTTTCCAATGCTGTTA+AGG | + | chr4.3:1049214-1049233 | MS.gene95860:CDS | 40.0% | |
| AGCAACCTAAGCAGGTTATA+TGG | + | chr4.3:1049261-1049280 | MS.gene95860:CDS | 40.0% | |
| AGCCTGAAGGAAAAAATTGC+TGG | + | chr4.3:1050144-1050163 | MS.gene95860:CDS | 40.0% | |
| AGGATTATCGCTAGTAATGC+GGG | + | chr4.3:1048024-1048043 | MS.gene95860:CDS | 40.0% | |
| ATATTGTCCTTGAGAAAGCC+TGG | - | chr4.3:1050213-1050232 | None:intergenic | 40.0% | |
| ATCTTCTACTCAACAACCTG+GGG | + | chr4.3:1048134-1048153 | MS.gene95860:CDS | 40.0% | |
| ATGTGTGAATAGGCTGGAAT+GGG | + | chr4.3:1048566-1048585 | MS.gene95860:CDS | 40.0% | |
| ATTCTTAGCAACGAACTGAG+AGG | - | chr4.3:1047986-1048005 | None:intergenic | 40.0% | |
| ATTGGAAGGCCAATGCTATT+AGG | - | chr4.3:1049512-1049531 | None:intergenic | 40.0% | |
| CAATCTTCTACTCAACAACC+TGG | + | chr4.3:1048132-1048151 | MS.gene95860:CDS | 40.0% | |
| CAGAAATTGAGTGGAAAACC+AGG | + | chr4.3:1050192-1050211 | MS.gene95860:CDS | 40.0% | |
| CATTCCCTCTTTAACAAGCT+GGG | - | chr4.3:1048841-1048860 | None:intergenic | 40.0% | |
| CCTGAAGGAAAAAATTGCTG+GGG | + | chr4.3:1050146-1050165 | MS.gene95860:CDS | 40.0% | |
| CGATTAGGATTGTGAAGAAC+TGG | + | chr4.3:1048934-1048953 | MS.gene95860:CDS | 40.0% | |
| GAGCCAGAAATTTATCCTCA+GGG | - | chr4.3:1049892-1049911 | None:intergenic | 40.0% | |
| GAGGATTATCGCTAGTAATG+CGG | + | chr4.3:1048023-1048042 | MS.gene95860:CDS | 40.0% | |
| GATAGGAGAAACCACAAACT+TGG | - | chr4.3:1049000-1049019 | None:intergenic | 40.0% | |
| GATCCCTGAGGATAAATTTC+TGG | + | chr4.3:1049886-1049905 | MS.gene95860:CDS | 40.0% | |
| GCAACCTAAGCAGGTTATAT+GGG | + | chr4.3:1049262-1049281 | MS.gene95860:CDS | 40.0% | |
| GCACATTACAATGTTAGTGG+AGG | + | chr4.3:1050240-1050259 | MS.gene95860:CDS | 40.0% | |
| GCCTGAAGGAAAAAATTGCT+GGG | + | chr4.3:1050145-1050164 | MS.gene95860:CDS | 40.0% | |
| GCTAACAAGCAGAAATTGAG+TGG | + | chr4.3:1050183-1050202 | MS.gene95860:CDS | 40.0% | |
| GGATCAAGTACTTTCCTTAC+TGG | - | chr4.3:1048255-1048274 | None:intergenic | 40.0% | |
| GTCACAGAATATTGGAAGTG+AGG | + | chr4.3:1049328-1049347 | MS.gene95860:CDS | 40.0% | |
| GTTAGAATAGCATCAGTAGC+AGG | - | chr4.3:1050003-1050022 | None:intergenic | 40.0% | |
| TATACAGTTAGGCTTCCTGA+AGG | + | chr4.3:1048291-1048310 | MS.gene95860:CDS | 40.0% | |
| TCTCAGTTCGTTGCTAAGAA+TGG | + | chr4.3:1047985-1048004 | MS.gene95860:CDS | 40.0% | |
| TCTCCTTATAACCTCCTCAA+GGG | - | chr4.3:1048742-1048761 | None:intergenic | 40.0% | |
| TGAAAGATGTGTGAATAGGC+TGG | + | chr4.3:1048560-1048579 | MS.gene95860:CDS | 40.0% | |
| TGAGCCAGAAATTTATCCTC+AGG | - | chr4.3:1049893-1049912 | None:intergenic | 40.0% | |
| TTCTCCTTATAACCTCCTCA+AGG | - | chr4.3:1048743-1048762 | None:intergenic | 40.0% | |
| TTCTTCACAATCCTAATCGG+TGG | - | chr4.3:1048933-1048952 | None:intergenic | 40.0% | |
| TTGGTTGAATCTCTATCTGC+AGG | - | chr4.3:1048981-1049000 | None:intergenic | 40.0% | |
| TTTGTGGTTTCTCCTATCAC+CGG | + | chr4.3:1049002-1049021 | MS.gene95860:CDS | 40.0% | |
| ! | AACGGGAAATCCTTTTTGAC+TGG | + | chr4.3:1048369-1048388 | MS.gene95860:CDS | 40.0% |
| ! | AACTGCCATTTGTTCTCTAC+AGG | + | chr4.3:1050020-1050039 | MS.gene95860:intron | 40.0% |
| ! | ACTGCCATTTGTTCTCTACA+GGG | + | chr4.3:1050021-1050040 | MS.gene95860:intron | 40.0% |
| ! | AGGAATTGATGGATGCATTG+GGG | - | chr4.3:1049642-1049661 | None:intergenic | 40.0% |
| ! | ATGTTTCTAATGTCTGGAGG+GGG | - | chr4.3:1047952-1047971 | None:intergenic | 40.0% |
| ! | CAATCTCTGTCTGAAACTGT+TGG | + | chr4.3:1050120-1050139 | MS.gene95860:CDS | 40.0% |
| ! | CTCAATTTCTGCTTGTTAGC+AGG | - | chr4.3:1050183-1050202 | None:intergenic | 40.0% |
| ! | CTTTGAATATGCATCGGCAA+GGG | - | chr4.3:1048472-1048491 | None:intergenic | 40.0% |
| ! | TGATTGGCATGATTTTGTGG+TGG | + | chr4.3:1048662-1048681 | MS.gene95860:CDS | 40.0% |
| !! | AAAGGTTTTGATGCCTCCAA+AGG | + | chr4.3:1048488-1048507 | MS.gene95860:CDS | 40.0% |
| !! | AAGGTTTTGATGCCTCCAAA+GGG | + | chr4.3:1048489-1048508 | MS.gene95860:CDS | 40.0% |
| !! | ACATTGCTTGGTTTGCAGTA+CGG | - | chr4.3:1049310-1049329 | None:intergenic | 40.0% |
| !! | TAAATTTCTGGCTCAGCATC+CGG | + | chr4.3:1049898-1049917 | MS.gene95860:CDS | 40.0% |
| !! | TCCTATAGTTCTAGTGTGTG+TGG | - | chr4.3:1047920-1047939 | None:intergenic | 40.0% |
| AAGAAGATACCGTTGAGCCA+GGG | + | chr4.3:1048781-1048800 | MS.gene95860:CDS | 45.0% | |
| AAGGGAAGAAGAGTGAAGTC+AGG | + | chr4.3:1048889-1048908 | MS.gene95860:CDS | 45.0% | |
| ACAAGAGCAAGCTAGGCAAA+AGG | + | chr4.3:1048596-1048615 | MS.gene95860:CDS | 45.0% | |
| ACAATCCTAATCGGTGGTTC+AGG | - | chr4.3:1048927-1048946 | None:intergenic | 45.0% | |
| ACAGATATACTGATCCGAGC+AGG | - | chr4.3:1050048-1050067 | None:intergenic | 45.0% | |
| AGATTCAAAGCTAGTCCAGG+TGG | - | chr4.3:1049452-1049471 | None:intergenic | 45.0% | |
| AGGCTGAGCAGTATACAGTT+AGG | + | chr4.3:1048280-1048299 | MS.gene95860:CDS | 45.0% | |
| AGGGAAGAAGAGTGAAGTCA+GGG | + | chr4.3:1048890-1048909 | MS.gene95860:CDS | 45.0% | |
| AGGTCCCTGTAGAGAACAAA+TGG | - | chr4.3:1050028-1050047 | None:intergenic | 45.0% | |
| ATAACCTCCTCAAGGGTCAT+CGG | - | chr4.3:1048735-1048754 | None:intergenic | 45.0% | |
| ATCATAGGCATCATCCCTGA+TGG | - | chr4.3:1049752-1049771 | None:intergenic | 45.0% | |
| ATCATGGAATGTTGTCCACC+AGG | - | chr4.3:1049605-1049624 | None:intergenic | 45.0% | |
| CAATCCTAATCGGTGGTTCA+GGG | - | chr4.3:1048926-1048945 | None:intergenic | 45.0% | |
| CACAATTTGTGGCTCGTAAC+GGG | + | chr4.3:1048352-1048371 | MS.gene95860:CDS | 45.0% | |
| CCATCCCATATAACCTGCTT+AGG | - | chr4.3:1049269-1049288 | None:intergenic | 45.0% | |
| CCATTCCCTCTTTAACAAGC+TGG | - | chr4.3:1048842-1048861 | None:intergenic | 45.0% | |
| CCTAAGCAGGTTATATGGGA+TGG | + | chr4.3:1049266-1049285 | MS.gene95860:CDS | 45.0% | |
| CCTTGCCGATGCATATTCAA+AGG | + | chr4.3:1048470-1048489 | MS.gene95860:CDS | 45.0% | |
| CTGCCCAGTTTAAACCAGTA+AGG | + | chr4.3:1048238-1048257 | MS.gene95860:CDS | 45.0% | |
| GATGGTCACAGTGGTAGTAT+TGG | + | chr4.3:1049284-1049303 | MS.gene95860:CDS | 45.0% | |
| GATGTGTGAATAGGCTGGAA+TGG | + | chr4.3:1048565-1048584 | MS.gene95860:CDS | 45.0% | |
| GCACAATTTGTGGCTCGTAA+CGG | + | chr4.3:1048351-1048370 | MS.gene95860:CDS | 45.0% | |
| GCCACACACACTAGAACTAT+AGG | + | chr4.3:1047916-1047935 | MS.gene95860:CDS | 45.0% | |
| GGGGTTCCTTGGTTATTCAT+AGG | - | chr4.3:1049662-1049681 | None:intergenic | 45.0% | |
| GGTAGATTCAAAGCTAGTCC+AGG | - | chr4.3:1049455-1049474 | None:intergenic | 45.0% | |
| GGTGGACAACATTCCATGAT+GGG | + | chr4.3:1049605-1049624 | MS.gene95860:CDS | 45.0% | |
| GTTATATGGGATGGTCACAG+TGG | + | chr4.3:1049275-1049294 | MS.gene95860:CDS | 45.0% | |
| TATGCATGATAGGGATCGGA+TGG | - | chr4.3:1048075-1048094 | None:intergenic | 45.0% | |
| TCCATTTCTACTTCCTTCCC+TGG | - | chr4.3:1048801-1048820 | None:intergenic | 45.0% | |
| TGACCCTTGAGGAGGTTATA+AGG | + | chr4.3:1048736-1048755 | MS.gene95860:CDS | 45.0% | |
| TGCACATGATGCAATCTCTC+CGG | + | chr4.3:1049552-1049571 | MS.gene95860:CDS | 45.0% | |
| TGGAAAACCAGGCTTTCTCA+AGG | + | chr4.3:1050203-1050222 | MS.gene95860:CDS | 45.0% | |
| TTCATCATCCTGTGCCAAAG+TGG | - | chr4.3:1049132-1049151 | None:intergenic | 45.0% | |
| ! | AGCATTGGAAACCTCTTCCT+CGG | - | chr4.3:1049210-1049229 | None:intergenic | 45.0% |
| ! | CCTTTGAATATGCATCGGCA+AGG | - | chr4.3:1048473-1048492 | None:intergenic | 45.0% |
| ! | CGGACTCGTCCTGATATTTT+TGG | + | chr4.3:1049179-1049198 | MS.gene95860:CDS | 45.0% |
| ! | GAAAAAGAGTGTACCCGACA+TGG | + | chr4.3:1048527-1048546 | MS.gene95860:CDS | 45.0% |
| ! | GGAATTGATGGATGCATTGG+GGG | - | chr4.3:1049641-1049660 | None:intergenic | 45.0% |
| ! | TCGTCATGTTTCTGCCTCTT+CGG | - | chr4.3:1049857-1049876 | None:intergenic | 45.0% |
| ! | TGGTGGACAACATTCCATGA+TGG | + | chr4.3:1049604-1049623 | MS.gene95860:CDS | 45.0% |
| ! | TGTTTCTAATGTCTGGAGGG+GGG | - | chr4.3:1047951-1047970 | None:intergenic | 45.0% |
| ! | TTTTGGTACTACCGAGGAAG+AGG | + | chr4.3:1049196-1049215 | MS.gene95860:CDS | 45.0% |
| !! | AGGTTTTGATGCCTCCAAAG+GGG | + | chr4.3:1048490-1048509 | MS.gene95860:CDS | 45.0% |
| !! | CCAGCTTGTTAAAGAGGGAA+TGG | + | chr4.3:1048839-1048858 | MS.gene95860:CDS | 45.0% |
| !! | GAAAGTACTTGATCCTCCTG+AGG | + | chr4.3:1048260-1048279 | MS.gene95860:CDS | 45.0% |
| !! | TAGCTTTGAATCTACCCCGT+GGG | + | chr4.3:1049459-1049478 | MS.gene95860:CDS | 45.0% |
| !! | TTACTATCAGTTTCTGGCGC+AGG | - | chr4.3:1048186-1048205 | None:intergenic | 45.0% |
| !!! | CCCCAGCAATTTTTTCCTTC+AGG | - | chr4.3:1050149-1050168 | None:intergenic | 45.0% |
| ACAGGAGTGAACTGAGATCC+AGG | - | chr4.3:1049698-1049717 | None:intergenic | 50.0% | |
| ACTGGAAGAGACCAGAAGAC+AGG | + | chr4.3:1048952-1048971 | MS.gene95860:CDS | 50.0% | |
| ACTGTATACTGCTCAGCCTC+AGG | - | chr4.3:1048279-1048298 | None:intergenic | 50.0% | |
| AGCGTTCACAAGAGCAAGCT+AGG | + | chr4.3:1048589-1048608 | MS.gene95860:CDS | 50.0% | |
| AGCTTCTCTGTCAACCCCTT+TGG | - | chr4.3:1048507-1048526 | None:intergenic | 50.0% | |
| AGGGCCAAGATTTCCATCAG+TGG | - | chr4.3:1047812-1047831 | None:intergenic | 50.0% | |
| ATAGGCATCATCCCTGATGG+TGG | - | chr4.3:1049749-1049768 | None:intergenic | 50.0% | |
| ATCATGTGCATGCCAGGTCT+TGG | - | chr4.3:1049542-1049561 | None:intergenic | 50.0% | |
| ATGGATGCTGTTCGCTTGGA+CGG | + | chr4.3:1048858-1048877 | MS.gene95860:CDS | 50.0% | |
| ATGTTATGCATAGGCCCACG+GGG | - | chr4.3:1049476-1049495 | None:intergenic | 50.0% | |
| ATTTCCATCAGTGGGAGGAG+CGG | - | chr4.3:1047803-1047822 | None:intergenic | 50.0% | |
| CATGTTATGCATAGGCCCAC+GGG | - | chr4.3:1049477-1049496 | None:intergenic | 50.0% | |
| CCAAGATTTCCATCAGTGGG+AGG | - | chr4.3:1047808-1047827 | None:intergenic | 50.0% | |
| CCTCCCACTGATGGAAATCT+TGG | + | chr4.3:1047805-1047824 | MS.gene95860:CDS | 50.0% | |
| GAAGAAGATACCGTTGAGCC+AGG | + | chr4.3:1048780-1048799 | MS.gene95860:CDS | 50.0% | |
| GAATGAGAGATCCTCCATCG+AGG | + | chr4.3:1047873-1047892 | MS.gene95860:CDS | 50.0% | |
| GAGAAGCAAGATGACGCTCA+TGG | + | chr4.3:1048758-1048777 | MS.gene95860:CDS | 50.0% | |
| GATTGCATCATGTGCATGCC+AGG | - | chr4.3:1049548-1049567 | None:intergenic | 50.0% | |
| GCATGTTATGCATAGGCCCA+CGG | - | chr4.3:1049478-1049497 | None:intergenic | 50.0% | |
| GCCAGGGAAGGAAGTAGAAA+TGG | + | chr4.3:1048797-1048816 | MS.gene95860:CDS | 50.0% | |
| GCTTGGACGGCAATGATGAA+GGG | + | chr4.3:1048871-1048890 | MS.gene95860:CDS | 50.0% | |
| GGAATCAGTTCACCGGTGAT+AGG | - | chr4.3:1049017-1049036 | None:intergenic | 50.0% | |
| GGGCCAAGATTTCCATCAGT+GGG | - | chr4.3:1047811-1047830 | None:intergenic | 50.0% | |
| GTGTGTGTGGCAACAGTTGT+CGG | - | chr4.3:1047907-1047926 | None:intergenic | 50.0% | |
| TACTTCCTTCCCTGGCTCAA+CGG | - | chr4.3:1048793-1048812 | None:intergenic | 50.0% | |
| TCAACTCACTCAAGAGGAGG+TGG | + | chr4.3:1047843-1047862 | MS.gene95860:CDS | 50.0% | |
| TCGAGAAACCACTTTGGCAC+AGG | + | chr4.3:1049121-1049140 | MS.gene95860:CDS | 50.0% | |
| TCTAGTAGAGCAGAATCCCC+AGG | - | chr4.3:1048153-1048172 | None:intergenic | 50.0% | |
| TGAAACTGTTGGCAGCCTGA+AGG | + | chr4.3:1050131-1050150 | MS.gene95860:CDS | 50.0% | |
| TGAGGCTCAACTCACTCAAG+AGG | + | chr4.3:1047837-1047856 | MS.gene95860:CDS | 50.0% | |
| TTCAAAGCTAGTCCAGGTGG+TGG | - | chr4.3:1049449-1049468 | None:intergenic | 50.0% | |
| TTCAAGCACGGTAGCCATGT+CGG | - | chr4.3:1048544-1048563 | None:intergenic | 50.0% | |
| TTCTCTGTCAACCCCTTTGG+AGG | - | chr4.3:1048504-1048523 | None:intergenic | 50.0% | |
| ! | AAGACCCTGAACCACCGATT+AGG | + | chr4.3:1048919-1048938 | MS.gene95860:CDS | 50.0% |
| ! | ACTGAAGGCATACCAGGTCT+TGG | - | chr4.3:1049413-1049432 | None:intergenic | 50.0% |
| ! | ATTGATGGATGCATTGGGGG+TGG | - | chr4.3:1049638-1049657 | None:intergenic | 50.0% |
| ! | CTTGAGTGAGTTGAGCCTCA+GGG | - | chr4.3:1047837-1047856 | None:intergenic | 50.0% |
| ! | GGACAACATTCCATGATGGG+TGG | + | chr4.3:1049608-1049627 | MS.gene95860:CDS | 50.0% |
| ! | TCTGCTTGTTAGCAGGGAGT+TGG | - | chr4.3:1050176-1050195 | None:intergenic | 50.0% |
| ! | TCTTGAGTGAGTTGAGCCTC+AGG | - | chr4.3:1047838-1047857 | None:intergenic | 50.0% |
| ! | TGTCGGTGTTTCTTCCTCGA+TGG | - | chr4.3:1047890-1047909 | None:intergenic | 50.0% |
| ! | TGTTTCTGCCTCTTCGGTTC+TGG | - | chr4.3:1049851-1049870 | None:intergenic | 50.0% |
| !! | AGAGGCCCAGCTTGTTAAAG+AGG | + | chr4.3:1048833-1048852 | MS.gene95860:CDS | 50.0% |
| !! | AGGCTTCCTGAAGGCATTAC+AGG | + | chr4.3:1048300-1048319 | MS.gene95860:CDS | 50.0% |
| !! | CTAGCTTTGAATCTACCCCG+TGG | + | chr4.3:1049458-1049477 | MS.gene95860:CDS | 50.0% |
| !! | GAGGCCCAGCTTGTTAAAGA+GGG | + | chr4.3:1048834-1048853 | MS.gene95860:CDS | 50.0% |
| !! | GATAGGGATCGGATGGATTG+AGG | - | chr4.3:1048068-1048087 | None:intergenic | 50.0% |
| !! | GCTTCCTGAAGGCATTACAG+GGG | + | chr4.3:1048302-1048321 | MS.gene95860:CDS | 50.0% |
| !! | GGCTTCCTGAAGGCATTACA+GGG | + | chr4.3:1048301-1048320 | MS.gene95860:CDS | 50.0% |
| AAATCTTGGCCCTCTCCCTG+AGG | + | chr4.3:1047819-1047838 | MS.gene95860:CDS | 55.0% | |
| ACCACGCTCTCTCAAGGCTA+GGG | - | chr4.3:1050277-1050296 | None:intergenic | 55.0% | |
| ACTCACTCAAGAGGAGGTGG+AGG | + | chr4.3:1047846-1047865 | MS.gene95860:CDS | 55.0% | |
| AGATACCGTTGAGCCAGGGA+AGG | + | chr4.3:1048785-1048804 | MS.gene95860:CDS | 55.0% | |
| ATGTGCATGCCAGGTCTTGG+TGG | - | chr4.3:1049539-1049558 | None:intergenic | 55.0% | |
| CAGAGGAACCAGAACCGAAG+AGG | + | chr4.3:1049840-1049859 | MS.gene95860:CDS | 55.0% | |
| CATCTGCATTGGAGGAGGAG+GGG | - | chr4.3:1049582-1049601 | None:intergenic | 55.0% | |
| CGATTCTGCTCTGATCCCTG+AGG | + | chr4.3:1049874-1049893 | MS.gene95860:CDS | 55.0% | |
| CGCTTGGACGGCAATGATGA+AGG | + | chr4.3:1048870-1048889 | MS.gene95860:CDS | 55.0% | |
| CGGTGTTTCTTCCTCGATGG+AGG | - | chr4.3:1047887-1047906 | None:intergenic | 55.0% | |
| GCATCTGCATTGGAGGAGGA+GGG | - | chr4.3:1049583-1049602 | None:intergenic | 55.0% | |
| GGAGCATAAGGTCGTGGAAC+AGG | - | chr4.3:1049716-1049735 | None:intergenic | 55.0% | |
| GGAGCGGGTAAAGGCAGTAT+AGG | - | chr4.3:1047787-1047806 | None:intergenic | 55.0% | |
| GGAGTGAACTGAGATCCAGG+TGG | - | chr4.3:1049695-1049714 | None:intergenic | 55.0% | |
| GGCTCAACTCACTCAAGAGG+AGG | + | chr4.3:1047840-1047859 | MS.gene95860:CDS | 55.0% | |
| GGGAATGGATGCTGTTCGCT+TGG | + | chr4.3:1048854-1048873 | MS.gene95860:CDS | 55.0% | |
| GTATACTGCTCAGCCTCAGG+AGG | - | chr4.3:1048276-1048295 | None:intergenic | 55.0% | |
| GTGAACTGAGATCCAGGTGG+TGG | - | chr4.3:1049692-1049711 | None:intergenic | 55.0% | |
| GTTCTCTACAGGGACCTGCT+CGG | + | chr4.3:1050031-1050050 | MS.gene95860:intron | 55.0% | |
| TCAAGCACGGTAGCCATGTC+GGG | - | chr4.3:1048543-1048562 | None:intergenic | 55.0% | |
| TCCTCCCCTGTAATGCCTTC+AGG | - | chr4.3:1048309-1048328 | None:intergenic | 55.0% | |
| TCTACCACCACGCTCTCTCA+AGG | - | chr4.3:1050283-1050302 | None:intergenic | 55.0% | |
| TCTGCAGGAAGCCTGTCTTC+TGG | - | chr4.3:1048966-1048985 | None:intergenic | 55.0% | |
| TGTCCACCAGGCATCTGCAT+TGG | - | chr4.3:1049593-1049612 | None:intergenic | 55.0% | |
| TTTCCATCAGTGGGAGGAGC+GGG | - | chr4.3:1047802-1047821 | None:intergenic | 55.0% | |
| ! | AAAGCTAGTCCAGGTGGTGG+CGG | - | chr4.3:1049446-1049465 | None:intergenic | 55.0% |
| ! | AACTGAGATCCAGGTGGTGG+AGG | - | chr4.3:1049689-1049708 | None:intergenic | 55.0% |
| ! | GAAGGCATACCAGGTCTTGG+AGG | - | chr4.3:1049410-1049429 | None:intergenic | 55.0% |
| ! | GGACGAACTGAAGGCATACC+AGG | - | chr4.3:1049419-1049438 | None:intergenic | 55.0% |
| ! | TGAGTTGAGCCTCAGGGAGA+GGG | - | chr4.3:1047831-1047850 | None:intergenic | 55.0% |
| !! | AGATCCAGGTGGTGGAGGAA+TGG | - | chr4.3:1049684-1049703 | None:intergenic | 55.0% |
| !! | ATCATCCCTGATGGTGGAGG+AGG | - | chr4.3:1049743-1049762 | None:intergenic | 55.0% |
| !! | ATCCAGGTGGTGGAGGAATG+GGG | - | chr4.3:1049682-1049701 | None:intergenic | 55.0% |
| !! | CTATCAGTTTCTGGCGCAGG+TGG | - | chr4.3:1048183-1048202 | None:intergenic | 55.0% |
| !! | CTCTTCGGTTCTGGTTCCTC+TGG | - | chr4.3:1049842-1049861 | None:intergenic | 55.0% |
| !! | GATCCAGGTGGTGGAGGAAT+GGG | - | chr4.3:1049683-1049702 | None:intergenic | 55.0% |
| !! | GGAGGTGGTGGATGCATCAT+AGG | - | chr4.3:1049767-1049786 | None:intergenic | 55.0% |
| !! | GGTTCTGGTTCCTCTGGAAG+CGG | - | chr4.3:1049836-1049855 | None:intergenic | 55.0% |
| !! | GTCTTGGTGGAGGCATTGGA+AGG | - | chr4.3:1049526-1049545 | None:intergenic | 55.0% |
| !! | GTTCTGGTTCCTCTGGAAGC+GGG | - | chr4.3:1049835-1049854 | None:intergenic | 55.0% |
| !! | TCATCCCTGATGGTGGAGGA+GGG | - | chr4.3:1049742-1049761 | None:intergenic | 55.0% |
| !! | TCCTGAAGGCATTACAGGGG+AGG | + | chr4.3:1048305-1048324 | MS.gene95860:CDS | 55.0% |
| !! | TTCTGGCTCAGCATCCGGTA+TGG | + | chr4.3:1049903-1049922 | MS.gene95860:intron | 55.0% |
| !! | TTCTGGTTCCTCTGGAAGCG+GGG | - | chr4.3:1049834-1049853 | None:intergenic | 55.0% |
| ACCTCCTCAAGGGTCATCGG+AGG | - | chr4.3:1048732-1048751 | None:intergenic | 60.0% | |
| ACCTCCTCCGATGACCCTTG+AGG | + | chr4.3:1048725-1048744 | MS.gene95860:CDS | 60.0% | |
| AGGCATTACAGGGGAGGAGC+TGG | + | chr4.3:1048311-1048330 | MS.gene95860:CDS | 60.0% | |
| CACCACGCTCTCTCAAGGCT+AGG | - | chr4.3:1050278-1050297 | None:intergenic | 60.0% | |
| CCAATGCCTCCACCAAGACC+TGG | + | chr4.3:1049527-1049546 | MS.gene95860:CDS | 60.0% | |
| CCACCAGGCATCTGCATTGG+AGG | - | chr4.3:1049590-1049609 | None:intergenic | 60.0% | |
| CCAGGCATCTGCATTGGAGG+AGG | - | chr4.3:1049587-1049606 | None:intergenic | 60.0% | |
| CCTCCAATGCAGATGCCTGG+TGG | + | chr4.3:1049587-1049606 | MS.gene95860:CDS | 60.0% | |
| CCTCCTCCAATGCAGATGCC+TGG | + | chr4.3:1049584-1049603 | MS.gene95860:CDS | 60.0% | |
| CTCAAGAGGAGGTGGAGGAG+AGG | + | chr4.3:1047851-1047870 | MS.gene95860:CDS | 60.0% | |
| CTCACCCTCCTCCACCATCA+GGG | + | chr4.3:1049735-1049754 | MS.gene95860:CDS | 60.0% | |
| GGCATACCAGGTCTTGGAGG+AGG | - | chr4.3:1049407-1049426 | None:intergenic | 60.0% | |
| GGCATCTGCATTGGAGGAGG+AGG | - | chr4.3:1049584-1049603 | None:intergenic | 60.0% | |
| GGCGGAAGAGGACGAACTGA+AGG | - | chr4.3:1049428-1049447 | None:intergenic | 60.0% | |
| GGGTGGTTGACCACCCATCA+TGG | - | chr4.3:1049621-1049640 | None:intergenic | 60.0% | |
| GTGGAGGAATGGGGGTTCCT+TGG | - | chr4.3:1049673-1049692 | None:intergenic | 60.0% | |
| TCAGTGGGAGGAGCGGGTAA+AGG | - | chr4.3:1047796-1047815 | None:intergenic | 60.0% | |
| TCCTCAAGGGTCATCGGAGG+AGG | - | chr4.3:1048729-1048748 | None:intergenic | 60.0% | |
| TCCTCCGATGACCCTTGAGG+AGG | + | chr4.3:1048728-1048747 | MS.gene95860:CDS | 60.0% | |
| TGCATGCCAGGTCTTGGTGG+AGG | - | chr4.3:1049536-1049555 | None:intergenic | 60.0% | |
| TTACCCGCTCCTCCCACTGA+TGG | + | chr4.3:1047796-1047815 | MS.gene95860:CDS | 60.0% | |
| ! | CCAGGTCTTGGTGGAGGCAT+TGG | - | chr4.3:1049530-1049549 | None:intergenic | 60.0% |
| ! | GGAGGAGGGTGAGGAGCATA+AGG | - | chr4.3:1049728-1049747 | None:intergenic | 60.0% |
| ! | GGGTGAGGAGCATAAGGTCG+TGG | - | chr4.3:1049722-1049741 | None:intergenic | 60.0% |
| ! | GTGAGTTGAGCCTCAGGGAG+AGG | - | chr4.3:1047832-1047851 | None:intergenic | 60.0% |
| ! | TCTGGTTCCTCTGGAAGCGG+GGG | - | chr4.3:1049833-1049852 | None:intergenic | 60.0% |
| !! | CTAGCCTTGAGAGAGCGTGG+TGG | + | chr4.3:1050276-1050295 | MS.gene95860:CDS | 60.0% |
| !! | GGCATCATCCCTGATGGTGG+AGG | - | chr4.3:1049746-1049765 | None:intergenic | 60.0% |
| !! | TCCAGGTGGTGGAGGAATGG+GGG | - | chr4.3:1049681-1049700 | None:intergenic | 60.0% |
| !! | TCCCTAGCCTTGAGAGAGCG+TGG | + | chr4.3:1050273-1050292 | MS.gene95860:CDS | 60.0% |
| ACCCCCATTCCTCCACCACC+TGG | + | chr4.3:1049677-1049696 | MS.gene95860:CDS | 65.0% | |
| ACTCCTTGAGGCGGAGGTGG+TGG | - | chr4.3:1049779-1049798 | None:intergenic | 65.0% | |
| CATCCACCACCTCCGCCTCA+AGG | + | chr4.3:1049773-1049792 | MS.gene95860:CDS | 65.0% | |
| CCTCACCCTCCTCCACCATC+AGG | + | chr4.3:1049734-1049753 | MS.gene95860:CDS | 65.0% | |
| GCTGCACCTCCTCCAAGACC+TGG | + | chr4.3:1049398-1049417 | MS.gene95860:CDS | 65.0% | |
| GGAGGAGCTTCCTCAGGTGG+CGG | - | chr4.3:1049812-1049831 | None:intergenic | 65.0% | |
| TGCATTGGAGGAGGAGGGGC+TGG | - | chr4.3:1049578-1049597 | None:intergenic | 65.0% | |
| ! | GAGGAGGTGCAGCAGGACCA+GGG | - | chr4.3:1049391-1049410 | None:intergenic | 65.0% |
| ! | GGTCTTGGAGGAGGTGCAGC+AGG | - | chr4.3:1049398-1049417 | None:intergenic | 65.0% |
| !! | AGTCCAGGTGGTGGCGGAAG+AGG | - | chr4.3:1049440-1049459 | None:intergenic | 65.0% |
| !! | CCTGATGGTGGAGGAGGGTG+AGG | - | chr4.3:1049737-1049756 | None:intergenic | 65.0% |
| AGCGGGGGAGGAGCTTCCTC+AGG | - | chr4.3:1049818-1049837 | None:intergenic | 70.0% | |
| AGCTCCTCCCCCGCTTCCAG+AGG | + | chr4.3:1049823-1049842 | MS.gene95860:CDS | 70.0% | |
| CGTCCTCTTCCGCCACCACC+TGG | + | chr4.3:1049434-1049453 | MS.gene95860:CDS | 70.0% | |
| GAGGTGCAGCAGGACCAGGG+AGG | - | chr4.3:1049388-1049407 | None:intergenic | 70.0% | |
| GGCACTCCTTGAGGCGGAGG+TGG | - | chr4.3:1049782-1049801 | None:intergenic | 70.0% | |
| GGGGGAGGAGCTTCCTCAGG+TGG | - | chr4.3:1049815-1049834 | None:intergenic | 70.0% | |
| ! | CTTCCTCAGGTGGCGGCGGT+GGG | - | chr4.3:1049805-1049824 | None:intergenic | 70.0% |
| ! | GGAGCTTCCTCAGGTGGCGG+CGG | - | chr4.3:1049809-1049828 | None:intergenic | 70.0% |
| ! | GGAGGAGGTGCAGCAGGACC+AGG | - | chr4.3:1049392-1049411 | None:intergenic | 70.0% |
| ! | GGTTCCTCTGGAAGCGGGGG+AGG | - | chr4.3:1049830-1049849 | None:intergenic | 70.0% |
| ! | TTCCTCAGGTGGCGGCGGTG+GGG | - | chr4.3:1049804-1049823 | None:intergenic | 70.0% |
| ! | TTGGAGGAGGAGGGGCTGGC+CGG | - | chr4.3:1049574-1049593 | None:intergenic | 70.0% |
| !! | GGTGGGGGCACTCCTTGAGG+CGG | - | chr4.3:1049788-1049807 | None:intergenic | 70.0% |
| ! | GCTTCCTCAGGTGGCGGCGG+TGG | - | chr4.3:1049806-1049825 | None:intergenic | 75.0% |
| ! | TCCTCAGGTGGCGGCGGTGG+GGG | - | chr4.3:1049803-1049822 | None:intergenic | 75.0% |
| !! | GGCGGTGGGGGCACTCCTTG+AGG | - | chr4.3:1049791-1049810 | None:intergenic | 75.0% |
| !! | GGGGGCACTCCTTGAGGCGG+AGG | - | chr4.3:1049785-1049804 | None:intergenic | 75.0% |
| ! | GCCCCCACCGCCGCCACCTG+AGG | + | chr4.3:1049799-1049818 | MS.gene95860:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 1047769 | 1050311 | 1047769 | ID=MS.gene95860 |
| chr4.3 | mRNA | 1047769 | 1050311 | 1047769 | ID=MS.gene95860.t1;Parent=MS.gene95860 |
| chr4.3 | exon | 1047769 | 1049919 | 1047769 | ID=MS.gene95860.t1.exon1;Parent=MS.gene95860.t1 |
| chr4.3 | CDS | 1047769 | 1049919 | 1047769 | ID=cds.MS.gene95860.t1;Parent=MS.gene95860.t1 |
| chr4.3 | exon | 1050042 | 1050311 | 1050042 | ID=MS.gene95860.t1.exon2;Parent=MS.gene95860.t1 |
| chr4.3 | CDS | 1050042 | 1050311 | 1050042 | ID=cds.MS.gene95860.t1;Parent=MS.gene95860.t1 |
| Gene Sequence |
| Protein sequence |
