Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96241.t1 | XP_003593912.1 | 99.7 | 749 | 2 | 0 | 5 | 753 | 44 | 792 | 0.00E+00 | 1476.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96241.t1 | Q8LGH4 | 84.2 | 734 | 116 | 0 | 20 | 753 | 59 | 792 | 0.0e+00 | 1230.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96241.t1 | G7IP77 | 99.7 | 749 | 2 | 0 | 5 | 753 | 44 | 792 | 0.0e+00 | 1476.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041539 | MS.gene96241 | PPI |
| MS.gene035311 | MS.gene96241 | PPI |
| MS.gene00337 | MS.gene96241 | PPI |
| MS.gene35971 | MS.gene96241 | PPI |
| MS.gene96241 | MS.gene036510 | PPI |
| MS.gene25469 | MS.gene96241 | PPI |
| MS.gene96241 | MS.gene25471 | PPI |
| MS.gene96241 | MS.gene055864 | PPI |
| MS.gene96241 | MS.gene91206 | PPI |
| MS.gene96241 | MS.gene004599 | PPI |
| MS.gene073389 | MS.gene96241 | PPI |
| MS.gene34691 | MS.gene96241 | PPI |
| MS.gene96241 | MS.gene58919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96241.t1 | MTR_2g019260 | 99.734 | 753 | 2 | 0 | 1 | 753 | 40 | 792 | 0.0 | 1561 |
| MS.gene96241.t1 | MTR_2g019260 | 99.582 | 717 | 3 | 0 | 1 | 717 | 40 | 756 | 0.0 | 1488 |
| MS.gene96241.t1 | MTR_8g056030 | 40.054 | 739 | 410 | 14 | 35 | 753 | 6 | 731 | 1.50e-175 | 521 |
| MS.gene96241.t1 | MTR_5g039880 | 40.782 | 716 | 403 | 12 | 52 | 753 | 24 | 732 | 6.33e-172 | 512 |
| MS.gene96241.t1 | MTR_6g011700 | 40.027 | 737 | 389 | 16 | 35 | 753 | 4 | 705 | 5.89e-170 | 506 |
| MS.gene96241.t1 | MTR_6g011770 | 39.431 | 738 | 392 | 16 | 35 | 753 | 4 | 705 | 1.24e-160 | 482 |
| MS.gene96241.t1 | MTR_7g039690 | 39.021 | 715 | 393 | 12 | 52 | 753 | 24 | 708 | 6.53e-158 | 475 |
| MS.gene96241.t1 | MTR_7g039660 | 39.130 | 713 | 408 | 14 | 52 | 753 | 23 | 720 | 1.18e-153 | 464 |
| MS.gene96241.t1 | MTR_7g108340 | 33.522 | 707 | 424 | 15 | 80 | 753 | 42 | 735 | 2.99e-120 | 378 |
| MS.gene96241.t1 | MTR_4g119413 | 33.427 | 715 | 428 | 14 | 76 | 753 | 41 | 744 | 1.24e-119 | 377 |
| MS.gene96241.t1 | MTR_2g437390 | 33.333 | 720 | 432 | 14 | 71 | 753 | 34 | 742 | 2.13e-119 | 376 |
| MS.gene96241.t1 | MTR_7g039790 | 34.011 | 738 | 440 | 18 | 35 | 753 | 8 | 717 | 3.96e-117 | 369 |
| MS.gene96241.t1 | MTR_1g040925 | 38.167 | 600 | 339 | 11 | 168 | 753 | 360 | 941 | 1.15e-116 | 374 |
| MS.gene96241.t1 | MTR_1g040925 | 28.723 | 376 | 239 | 10 | 48 | 405 | 25 | 389 | 3.11e-38 | 153 |
| MS.gene96241.t1 | MTR_5g039770 | 35.870 | 644 | 371 | 17 | 125 | 753 | 38 | 654 | 3.27e-111 | 352 |
| MS.gene96241.t1 | MTR_7g445240 | 33.424 | 736 | 431 | 20 | 35 | 753 | 8 | 701 | 5.87e-110 | 350 |
| MS.gene96241.t1 | MTR_1g040995 | 39.020 | 510 | 298 | 8 | 168 | 666 | 360 | 867 | 1.58e-105 | 343 |
| MS.gene96241.t1 | MTR_1g040995 | 28.723 | 376 | 239 | 10 | 48 | 405 | 25 | 389 | 2.79e-38 | 153 |
| MS.gene96241.t1 | MTR_4g119413 | 30.922 | 553 | 340 | 12 | 76 | 593 | 41 | 586 | 1.06e-76 | 260 |
| MS.gene96241.t1 | MTR_5g040040 | 39.410 | 373 | 179 | 10 | 389 | 753 | 253 | 586 | 7.59e-64 | 224 |
| MS.gene96241.t1 | MTR_5g039890 | 30.901 | 466 | 258 | 10 | 35 | 443 | 4 | 462 | 2.43e-63 | 219 |
| MS.gene96241.t1 | MTR_1g040965 | 44.231 | 208 | 111 | 4 | 551 | 753 | 11 | 218 | 2.49e-46 | 164 |
| MS.gene96241.t1 | MTR_5g040180 | 30.894 | 369 | 233 | 10 | 49 | 403 | 9 | 369 | 6.92e-44 | 162 |
| MS.gene96241.t1 | MTR_7g039680 | 29.315 | 365 | 226 | 7 | 35 | 388 | 4 | 347 | 8.64e-43 | 159 |
| MS.gene96241.t1 | MTR_5g040190 | 31.546 | 317 | 197 | 9 | 54 | 358 | 13 | 321 | 4.72e-40 | 151 |
| MS.gene96241.t1 | MTR_7g039430 | 31.661 | 319 | 194 | 9 | 54 | 358 | 13 | 321 | 1.71e-39 | 149 |
| MS.gene96241.t1 | MTR_7g039440 | 32.423 | 293 | 181 | 7 | 123 | 403 | 18 | 305 | 6.24e-39 | 147 |
| MS.gene96241.t1 | MTR_7g039380 | 29.442 | 197 | 132 | 4 | 54 | 246 | 13 | 206 | 2.45e-24 | 102 |
| MS.gene96241.t1 | MTR_5g040230 | 29.012 | 162 | 110 | 3 | 87 | 246 | 109 | 267 | 6.13e-19 | 87.8 |
| MS.gene96241.t1 | MTR_7g039770 | 47.778 | 90 | 35 | 2 | 666 | 753 | 117 | 196 | 7.47e-15 | 74.3 |
| MS.gene96241.t1 | MTR_7g445230 | 47.778 | 90 | 35 | 2 | 666 | 753 | 117 | 196 | 7.47e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96241.t1 | AT5G46210 | 84.196 | 734 | 116 | 0 | 20 | 753 | 59 | 792 | 0.0 | 1271 |
| MS.gene96241.t1 | AT1G26830 | 40.460 | 739 | 413 | 13 | 32 | 753 | 4 | 732 | 1.87e-180 | 534 |
| MS.gene96241.t1 | AT1G69670 | 39.674 | 736 | 423 | 12 | 32 | 753 | 4 | 732 | 3.07e-180 | 533 |
| MS.gene96241.t1 | AT1G69670 | 39.674 | 736 | 423 | 12 | 32 | 753 | 4 | 732 | 3.07e-180 | 533 |
| MS.gene96241.t1 | AT4G02570 | 32.794 | 741 | 446 | 16 | 54 | 753 | 9 | 738 | 2.67e-123 | 386 |
| MS.gene96241.t1 | AT4G02570 | 32.794 | 741 | 446 | 16 | 54 | 753 | 9 | 738 | 2.67e-123 | 386 |
| MS.gene96241.t1 | AT4G02570 | 32.794 | 741 | 446 | 16 | 54 | 753 | 9 | 738 | 2.67e-123 | 386 |
| MS.gene96241.t1 | AT4G02570 | 32.794 | 741 | 446 | 16 | 54 | 753 | 9 | 738 | 2.67e-123 | 386 |
| MS.gene96241.t1 | AT1G02980 | 30.780 | 744 | 455 | 18 | 57 | 753 | 12 | 742 | 9.26e-107 | 343 |
| MS.gene96241.t1 | AT1G02980 | 30.780 | 744 | 455 | 18 | 57 | 753 | 12 | 742 | 9.26e-107 | 343 |
| MS.gene96241.t1 | AT1G43140 | 30.352 | 738 | 442 | 18 | 54 | 753 | 18 | 721 | 5.61e-95 | 311 |
| MS.gene96241.t1 | AT4G12100 | 32.759 | 348 | 204 | 8 | 55 | 388 | 79 | 410 | 4.87e-50 | 182 |
| MS.gene96241.t1 | AT3G46910 | 35.745 | 235 | 127 | 6 | 42 | 258 | 16 | 244 | 1.63e-32 | 126 |
| MS.gene96241.t1 | AT1G59790 | 25.610 | 328 | 220 | 11 | 79 | 390 | 47 | 366 | 1.08e-18 | 89.4 |
| MS.gene96241.t1 | AT1G59790 | 25.237 | 317 | 213 | 11 | 79 | 379 | 47 | 355 | 4.87e-16 | 81.3 |
| MS.gene96241.t1 | AT2G04660 | 26.000 | 200 | 142 | 2 | 426 | 620 | 537 | 735 | 1.48e-11 | 68.6 |
| MS.gene96241.t1 | AT1G59800 | 25.472 | 212 | 139 | 7 | 80 | 281 | 43 | 245 | 4.70e-11 | 64.3 |
Find 164 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCCCTTCTTGAATTTA+AGG | 0.088937 | 2.2:+65369144 | MS.gene96241:CDS |
| TGATCTTTGCATTCATAAAA+TGG | 0.127842 | 2.2:+65362008 | MS.gene96241:CDS |
| GTTGGCTGTCTCCCTATTTC+AGG | 0.192113 | 2.2:+65372691 | MS.gene96241:CDS |
| CACCAAATATACGGTCAATA+TGG | 0.199641 | 2.2:+65362226 | MS.gene96241:CDS |
| TCCCATATTGACCGTATATT+TGG | 0.202482 | 2.2:-65362228 | None:intergenic |
| TCGTGGTATAGCCTTGTTTC+TGG | 0.208174 | 2.2:+65362182 | MS.gene96241:CDS |
| TTTAAATCAGCTGGTTTAAT+AGG | 0.212702 | 2.2:-65374679 | None:intergenic |
| TTGAAAGGCAAACCTGAAAT+AGG | 0.216829 | 2.2:-65372703 | None:intergenic |
| TAAACTTCGTGCGGGTAATA+AGG | 0.224990 | 2.2:+65370689 | MS.gene96241:CDS |
| ATAGGGTTTCTCTATGCTTA+TGG | 0.229023 | 2.2:+65368973 | MS.gene96241:intron |
| ATGCTCAAATGCGTCTTTAA+TGG | 0.244930 | 2.2:-65369224 | None:intergenic |
| TGTCTTGTCTTCAAAATTAC+TGG | 0.258979 | 2.2:-65361773 | None:intergenic |
| CGGCGGCGCCGCCTCTAATA+TGG | 0.266801 | 2.2:+65360416 | MS.gene96241:CDS |
| TTTCCAAGATCGTCAATATC+AGG | 0.294842 | 2.2:+65373380 | MS.gene96241:CDS |
| CAAGCTGGAAGGAATGTTTA+AGG | 0.300663 | 2.2:+65371154 | MS.gene96241:CDS |
| ATCTGCAGCACTGCAGTCTT+TGG | 0.301773 | 2.2:+65362077 | MS.gene96241:CDS |
| GTTAAAGATGTTTACTGCTC+TGG | 0.301775 | 2.2:+65368155 | MS.gene96241:CDS |
| CCTGATTGACAGAGAATATC+TGG | 0.307979 | 2.2:+65374717 | MS.gene96241:CDS |
| GATAGAAATACAATCAAATC+TGG | 0.313580 | 2.2:-65362111 | None:intergenic |
| CGCCCCTCTTTACCGTATAA+AGG | 0.325505 | 2.2:+65373120 | MS.gene96241:CDS |
| CGACTTGGAGAAGCTTTATC+AGG | 0.336314 | 2.2:+65361852 | MS.gene96241:CDS |
| ATGGGTATTGTACCTTTATA+CGG | 0.337851 | 2.2:-65373132 | None:intergenic |
| CTTTGGGAAAATCTGCCTTT+AGG | 0.342861 | 2.2:-65372658 | None:intergenic |
| AGCCTTCACCTTGGAGATCA+TGG | 0.344264 | 2.2:-65371015 | None:intergenic |
| CTCATGTGGCAAAATTCTTT+AGG | 0.360455 | 2.2:+65372626 | MS.gene96241:CDS |
| TCTCCTGATGTATGAACTAA+TGG | 0.362057 | 2.2:-65369074 | None:intergenic |
| CTTCCAGCTTGTTTGTGAAC+TGG | 0.365773 | 2.2:-65371142 | None:intergenic |
| GTTCAACACAAAACTGTTAC+TGG | 0.371377 | 2.2:+65362297 | MS.gene96241:CDS |
| CAAAATTACTGGGCACTGTT+GGG | 0.381314 | 2.2:-65361762 | None:intergenic |
| AGTGTTCATGTCTTGACAAC+AGG | 0.383366 | 2.2:+65372311 | MS.gene96241:CDS |
| CTTGCTAAAAGACTACTCTT+AGG | 0.384308 | 2.2:+65370963 | MS.gene96241:CDS |
| TGAAAGGCAAACCTGAAATA+GGG | 0.385978 | 2.2:-65372702 | None:intergenic |
| TATACCTGCCATTCTTGATA+AGG | 0.387173 | 2.2:+65368864 | MS.gene96241:CDS |
| TCCACATGCTTCAAGTAATC+TGG | 0.392688 | 2.2:-65368273 | None:intergenic |
| TAACCTGATATTGACGATCT+TGG | 0.398987 | 2.2:-65373383 | None:intergenic |
| AACTGGACAGGGCATTGTTA+TGG | 0.399445 | 2.2:+65369096 | MS.gene96241:CDS |
| TACTTCAGAAGAGGAATTAG+AGG | 0.402971 | 2.2:+65370713 | MS.gene96241:CDS |
| AGAGCAAGTGCATTCTTTGA+AGG | 0.402989 | 2.2:-65369015 | None:intergenic |
| CCAGATATTCTCTGTCAATC+AGG | 0.410647 | 2.2:-65374717 | None:intergenic |
| AAACTTCGTGCGGGTAATAA+GGG | 0.411117 | 2.2:+65370690 | MS.gene96241:CDS |
| TGAAACAATCACCAAATATA+CGG | 0.427214 | 2.2:+65362217 | MS.gene96241:CDS |
| ACCAAATATACGGTCAATAT+GGG | 0.435228 | 2.2:+65362227 | MS.gene96241:CDS |
| ACTAAGCTTTCAAGATATCA+AGG | 0.436910 | 2.2:+65372854 | MS.gene96241:CDS |
| TTCTCCAAGTCGCAGGAGTC+GGG | 0.437514 | 2.2:-65361841 | None:intergenic |
| AAAAGTTCGTGTTCTACAAA+AGG | 0.437752 | 2.2:+65372935 | MS.gene96241:CDS |
| AACCAGCTGATTTAAAGAAA+AGG | 0.437814 | 2.2:+65374686 | MS.gene96241:CDS |
| AGGCGGCGCCGCCGCGAGGA+AGG | 0.440714 | 2.2:-65360407 | None:intergenic |
| GATCTTTGCATTCATAAAAT+GGG | 0.446839 | 2.2:+65362009 | MS.gene96241:CDS |
| TTAAAGATGTTTACTGCTCT+GGG | 0.447364 | 2.2:+65368156 | MS.gene96241:CDS |
| ATGAATGCAAAGATCATTGA+CGG | 0.448526 | 2.2:-65362001 | None:intergenic |
| CAAGATATCAAGGATTCTAC+TGG | 0.452433 | 2.2:+65372864 | MS.gene96241:CDS |
| TCAAAATTACTGGGCACTGT+TGG | 0.453025 | 2.2:-65361763 | None:intergenic |
| AGTTCATACATCAGGAGAAC+TGG | 0.453158 | 2.2:+65369079 | MS.gene96241:CDS |
| TCTTCCACATCTCTACCCTT+TGG | 0.458927 | 2.2:-65373064 | None:intergenic |
| TCATGAATTGAATGTTTACC+AGG | 0.462056 | 2.2:+65372455 | MS.gene96241:CDS |
| TATTACTGAACTCTTCCAAC+AGG | 0.462708 | 2.2:+65374292 | MS.gene96241:CDS |
| AGAAGCTTCTTAGCAGGTTG+AGG | 0.465867 | 2.2:-65360471 | None:intergenic |
| TGAAAGATGTTTGATCTACT+TGG | 0.468770 | 2.2:+65368783 | MS.gene96241:CDS |
| TACGAATGATTGACAGTGAA+AGG | 0.468836 | 2.2:+65362325 | MS.gene96241:CDS |
| AAAATTCAGATGTACATTCA+AGG | 0.475948 | 2.2:-65368209 | None:intergenic |
| TTTAGGTCACTGTGTCCTAA+AGG | 0.476864 | 2.2:+65372643 | MS.gene96241:CDS |
| GAGATTAGCAGCCATATTAG+AGG | 0.491945 | 2.2:-65360427 | None:intergenic |
| TACCACGAATCATCAACATT+TGG | 0.492711 | 2.2:-65362167 | None:intergenic |
| AGGCTGCTCTTGACACAACA+TGG | 0.497636 | 2.2:+65369164 | MS.gene96241:CDS |
| TTGATGAGAAGCTTCTTAGC+AGG | 0.505221 | 2.2:-65360477 | None:intergenic |
| GCAGCACTGCAGTCTTTGGT+TGG | 0.507190 | 2.2:+65362081 | MS.gene96241:CDS |
| GTACCTTTATACGGTAAAGA+GGG | 0.508391 | 2.2:-65373123 | None:intergenic |
| CTTCTCCAAGTCGCAGGAGT+CGG | 0.508524 | 2.2:-65361842 | None:intergenic |
| GGTGAATGCAATTCAGTTGA+AGG | 0.508957 | 2.2:+65373320 | MS.gene96241:intron |
| AAAGGGCAAGGATGTGTTTG+AGG | 0.509726 | 2.2:+65370923 | MS.gene96241:intron |
| AGGCCATTAGTTCATACATC+AGG | 0.510040 | 2.2:+65369071 | MS.gene96241:CDS |
| TCTTTATCAACGGATTGAAA+AGG | 0.513524 | 2.2:+65362038 | MS.gene96241:CDS |
| AACTTGGCAATCAACTCTGC+AGG | 0.515108 | 2.2:-65370657 | None:intergenic |
| CATGTATTTCACACCTTCAG+AGG | 0.516247 | 2.2:-65368235 | None:intergenic |
| AGGTTTGAGATCGTCGTCCA+TGG | 0.517197 | 2.2:-65360379 | None:intergenic |
| GCAACCCGACTCCTGCGACT+TGG | 0.518198 | 2.2:+65361837 | MS.gene96241:CDS |
| TGTACCTTTATACGGTAAAG+AGG | 0.518229 | 2.2:-65373124 | None:intergenic |
| TGGGGTAAATATACTATGCC+AGG | 0.519045 | 2.2:-65374774 | None:intergenic |
| TGCCCTTGAGTCATTGAGGC+AGG | 0.519952 | 2.2:+65369051 | MS.gene96241:CDS |
| ATGAGGAAGTCTGACATCCA+TGG | 0.522877 | 2.2:-65372436 | None:intergenic |
| ATACATCAGGAGAACTGGAC+AGG | 0.527967 | 2.2:+65369084 | MS.gene96241:CDS |
| GCGAGAACAAAACTCCCATC+AGG | 0.529523 | 2.2:+65372278 | MS.gene96241:CDS |
| CACTCATTTCAATGCCTGAT+GGG | 0.530176 | 2.2:-65372292 | None:intergenic |
| TCAGATGTACATTCAAGGAA+TGG | 0.531912 | 2.2:-65368204 | None:intergenic |
| TATCTCTAGTCGAGAGATGT+TGG | 0.533357 | 2.2:+65362130 | MS.gene96241:CDS |
| TTGTGAGGATAATGAAAACT+AGG | 0.536734 | 2.2:+65374246 | MS.gene96241:CDS |
| GAGCAAAACCTTATCAAGAA+TGG | 0.537185 | 2.2:-65368872 | None:intergenic |
| AAAACCTTATCAAGAATGGC+AGG | 0.537415 | 2.2:-65368868 | None:intergenic |
| CTTTGCATTCATAAAATGGG+TGG | 0.540904 | 2.2:+65362012 | MS.gene96241:CDS |
| GCATCTTATCAATCTCCGTC+AGG | 0.543130 | 2.2:+65369243 | MS.gene96241:CDS |
| AGCTTCTTAGCAGGTTGAGG+AGG | 0.543443 | 2.2:-65360468 | None:intergenic |
| ATCCTTCAGACAGTCATCCC+AGG | 0.545646 | 2.2:+65372256 | MS.gene96241:CDS |
| GCCAGGTAATTGTATACTTG+CGG | 0.547790 | 2.2:-65374757 | None:intergenic |
| CGCCTGGGATGACTGTCTGA+AGG | 0.549291 | 2.2:-65372258 | None:intergenic |
| GAGCAGCCTTAAATTCAAGA+AGG | 0.550464 | 2.2:-65369150 | None:intergenic |
| GGGCACACTTGATAAAGTCC+TGG | 0.550472 | 2.2:+65370734 | MS.gene96241:CDS |
| GGCGCCGCCGCGAGGAAGGT+CGG | 0.550677 | 2.2:-65360403 | None:intergenic |
| AGCAGCCTTAAATTCAAGAA+GGG | 0.554319 | 2.2:-65369149 | None:intergenic |
| GTCTTGTCTTCAAAATTACT+GGG | 0.555479 | 2.2:-65361772 | None:intergenic |
| ATAGAAATACAATCAAATCT+GGG | 0.555611 | 2.2:-65362110 | None:intergenic |
| GGTTTCTCTATGCTTATGGA+TGG | 0.557005 | 2.2:+65368977 | MS.gene96241:CDS |
| GACCAAATGTTGATGATTCG+TGG | 0.557183 | 2.2:+65362165 | MS.gene96241:CDS |
| TGGCCTGCCTCAATGACTCA+AGG | 0.558373 | 2.2:-65369054 | None:intergenic |
| CAGTAAACATCTTTAACAGA+TGG | 0.561133 | 2.2:-65368149 | None:intergenic |
| ATCTGAGCAAATACAGTGGA+AGG | 0.561281 | 2.2:+65372600 | MS.gene96241:CDS |
| TTTGCAGACAAGATTGCAAG+AGG | 0.563201 | 2.2:+65368756 | MS.gene96241:intron |
| ATAAAGCTTCTCCAAGTCGC+AGG | 0.568208 | 2.2:-65361848 | None:intergenic |
| TCTAGTCGAGAGATGTTGGC+AGG | 0.568237 | 2.2:+65362134 | MS.gene96241:CDS |
| TTCCAGATTAGGTGAAGCAG+TGG | 0.570830 | 2.2:+65368110 | MS.gene96241:intron |
| TTTGCATTCATAAAATGGGT+GGG | 0.576229 | 2.2:+65362013 | MS.gene96241:CDS |
| ATATGGCTGCTAATCTCGCT+CGG | 0.576271 | 2.2:+65360433 | MS.gene96241:CDS |
| ACAGGGCATTGTTATGGATG+AGG | 0.579098 | 2.2:+65369102 | MS.gene96241:CDS |
| ACATCCATGGGTGGATATGT+TGG | 0.581084 | 2.2:-65372423 | None:intergenic |
| ACACTCATTTCAATGCCTGA+TGG | 0.581343 | 2.2:-65372293 | None:intergenic |
| AACATGCAACAGATGCCAAA+GGG | 0.584238 | 2.2:+65373049 | MS.gene96241:intron |
| TTGGATGATAAACTTCGTGC+GGG | 0.584415 | 2.2:+65370681 | MS.gene96241:CDS |
| CCGCCGCGAGGAAGGTCGGT+AGG | 0.585444 | 2.2:-65360399 | None:intergenic |
| TAGCCAGTTCACAAACAAGC+TGG | 0.586128 | 2.2:+65371139 | MS.gene96241:CDS |
| TATACGGTCAATATGGGACA+TGG | 0.587653 | 2.2:+65362233 | MS.gene96241:CDS |
| TGAGGAAGTCTGACATCCAT+GGG | 0.588123 | 2.2:-65372435 | None:intergenic |
| TGGGTGGGAATCTTTATCAA+CGG | 0.595371 | 2.2:+65362028 | MS.gene96241:CDS |
| TAATAAGGGTACTTCAGAAG+AGG | 0.602012 | 2.2:+65370704 | MS.gene96241:CDS |
| TGACAGAGAATATCTGGAGA+GGG | 0.603733 | 2.2:+65374723 | MS.gene96241:CDS |
| GGCCTGCCTCAATGACTCAA+GGG | 0.604534 | 2.2:-65369053 | None:intergenic |
| ATCTTGGAAAACTCTTTCTG+TGG | 0.605393 | 2.2:-65373367 | None:intergenic |
| TCCAGATTACTTGAAGCATG+TGG | 0.612759 | 2.2:+65368272 | MS.gene96241:CDS |
| CTGGCCAACATATCCACCCA+TGG | 0.617052 | 2.2:+65372419 | MS.gene96241:CDS |
| TCGAAGACAAGGAACTGAGA+AGG | 0.619324 | 2.2:+65372889 | MS.gene96241:CDS |
| TCCGCAAGTATACAATTACC+TGG | 0.622714 | 2.2:+65374756 | MS.gene96241:CDS |
| GTGTTCATGTCTTGACAACA+GGG | 0.623106 | 2.2:+65372312 | MS.gene96241:CDS |
| TCAATGCCCTTGAGTCATTG+AGG | 0.623443 | 2.2:+65369047 | MS.gene96241:CDS |
| CAGTTCACAAACAAGCTGGA+AGG | 0.623690 | 2.2:+65371143 | MS.gene96241:CDS |
| GATGCCAAAGGGTAGAGATG+TGG | 0.624974 | 2.2:+65373060 | MS.gene96241:intron |
| TTTGGATGATAAACTTCGTG+CGG | 0.625081 | 2.2:+65370680 | MS.gene96241:CDS |
| ACAGTGGAAGGCGTCTCATG+TGG | 0.625966 | 2.2:+65372612 | MS.gene96241:CDS |
| TGGTAAACATTCAATTCATG+AGG | 0.627301 | 2.2:-65372453 | None:intergenic |
| TTAGAGGCGGCGCCGCCGCG+AGG | 0.627743 | 2.2:-65360411 | None:intergenic |
| GAACATGCAACAGATGCCAA+AGG | 0.630147 | 2.2:+65373048 | MS.gene96241:intron |
| TCAGTTGAAGGAGACAGTAG+AGG | 0.631451 | 2.2:+65373332 | MS.gene96241:CDS |
| TTCTACTGGTATCGAAGACA+AGG | 0.634091 | 2.2:+65372878 | MS.gene96241:CDS |
| TACCTTTATACGGTAAAGAG+GGG | 0.638692 | 2.2:-65373122 | None:intergenic |
| ACTCTGCAATCACTTGCATG+TGG | 0.641153 | 2.2:+65372912 | MS.gene96241:CDS |
| GAATGAACCTGAATAAAACC+AGG | 0.646175 | 2.2:-65370752 | None:intergenic |
| CTTCTCATCAAGCTCCACAA+AGG | 0.647325 | 2.2:+65360489 | MS.gene96241:CDS |
| AGATTACTTGAAGCATGTGG+AGG | 0.650956 | 2.2:+65368275 | MS.gene96241:CDS |
| GGAGAAATCCATGATCTCCA+AGG | 0.653599 | 2.2:+65371007 | MS.gene96241:CDS |
| TGGCAATCAACTCTGCAGGT+CGG | 0.662336 | 2.2:-65370653 | None:intergenic |
| TTGACAGAGAATATCTGGAG+AGG | 0.663051 | 2.2:+65374722 | MS.gene96241:CDS |
| GGCTGCTCTTGACACAACAT+GGG | 0.668657 | 2.2:+65369165 | MS.gene96241:CDS |
| ATATGTTCTATCCAGAAACA+AGG | 0.671464 | 2.2:-65362193 | None:intergenic |
| ATACGGTCAATATGGGACAT+GGG | 0.673693 | 2.2:+65362234 | MS.gene96241:CDS |
| ACTTCAGAAGAGGAATTAGA+GGG | 0.675328 | 2.2:+65370714 | MS.gene96241:CDS |
| TGAGGAGAAAGATAAAGACA+TGG | 0.677344 | 2.2:+65369120 | MS.gene96241:CDS |
| TTCTATCTGAGCAAATACAG+TGG | 0.683202 | 2.2:+65372596 | MS.gene96241:CDS |
| TACATCAGGAGAACTGGACA+GGG | 0.684375 | 2.2:+65369085 | MS.gene96241:CDS |
| AGAGTGAGAAATGACCTTTG+TGG | 0.684737 | 2.2:-65360503 | None:intergenic |
| AAAGAGTGCTTCAATTGACG+CGG | 0.692090 | 2.2:+65370986 | MS.gene96241:CDS |
| CTTTATACGGTAAAGAGGGG+CGG | 0.695442 | 2.2:-65373119 | None:intergenic |
| ATTAGCAGCCATATTAGAGG+CGG | 0.711323 | 2.2:-65360424 | None:intergenic |
| GGAAGTCTGACATCCATGGG+TGG | 0.712438 | 2.2:-65372432 | None:intergenic |
| AGGTCGATGCTGCTATTGTG+AGG | 0.737367 | 2.2:+65374231 | MS.gene96241:intron |
| AAACCTACCGACCTTCCTCG+CGG | 0.739045 | 2.2:+65360396 | MS.gene96241:CDS |
| ATGCAGTTGAAGACTGAGTG+TGG | 0.742853 | 2.2:+65371116 | MS.gene96241:intron |
| CCTACCGACCTTCCTCGCGG+CGG | 0.754969 | 2.2:+65360399 | MS.gene96241:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 65360381 | 65374783 | 65360381 | ID=MS.gene96241 |
| chr2.2 | mRNA | 65360381 | 65374783 | 65360381 | ID=MS.gene96241.t1;Parent=MS.gene96241 |
| chr2.2 | exon | 65360381 | 65360510 | 65360381 | ID=MS.gene96241.t1.exon1;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65360381 | 65360510 | 65360381 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65361758 | 65361873 | 65361758 | ID=MS.gene96241.t1.exon2;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65361758 | 65361873 | 65361758 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65362000 | 65362346 | 65362000 | ID=MS.gene96241.t1.exon3;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65362000 | 65362346 | 65362000 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65368116 | 65368296 | 65368116 | ID=MS.gene96241.t1.exon4;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65368116 | 65368296 | 65368116 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65368763 | 65368885 | 65368763 | ID=MS.gene96241.t1.exon5;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65368763 | 65368885 | 65368763 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65368977 | 65369264 | 65368977 | ID=MS.gene96241.t1.exon6;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65368977 | 65369264 | 65368977 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65370651 | 65370776 | 65370651 | ID=MS.gene96241.t1.exon7;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65370651 | 65370776 | 65370651 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65370927 | 65371028 | 65370927 | ID=MS.gene96241.t1.exon8;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65370927 | 65371028 | 65370927 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65371122 | 65371175 | 65371122 | ID=MS.gene96241.t1.exon9;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65371122 | 65371175 | 65371122 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65372227 | 65372333 | 65372227 | ID=MS.gene96241.t1.exon10;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65372227 | 65372333 | 65372227 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65372416 | 65372476 | 65372416 | ID=MS.gene96241.t1.exon11;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65372416 | 65372476 | 65372416 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65372581 | 65372712 | 65372581 | ID=MS.gene96241.t1.exon12;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65372581 | 65372712 | 65372581 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65372819 | 65372956 | 65372819 | ID=MS.gene96241.t1.exon13;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65372819 | 65372956 | 65372819 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65373061 | 65373141 | 65373061 | ID=MS.gene96241.t1.exon14;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65373061 | 65373141 | 65373061 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65373321 | 65373401 | 65373321 | ID=MS.gene96241.t1.exon15;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65373321 | 65373401 | 65373321 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65374233 | 65374313 | 65374233 | ID=MS.gene96241.t1.exon16;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65374233 | 65374313 | 65374233 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| chr2.2 | exon | 65374670 | 65374783 | 65374670 | ID=MS.gene96241.t1.exon17;Parent=MS.gene96241.t1 |
| chr2.2 | CDS | 65374670 | 65374783 | 65374670 | ID=cds.MS.gene96241.t1;Parent=MS.gene96241.t1 |
| Gene Sequence |
| Protein sequence |