Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25471.t1 | PNY10018.1 | 96.6 | 674 | 23 | 0 | 1 | 674 | 52 | 725 | 0.00E+00 | 1291.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25471.t1 | Q9ZVH4 | 81.6 | 674 | 124 | 0 | 1 | 674 | 59 | 732 | 0.0e+00 | 1119.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25471.t1 | A0A2K3P402 | 96.6 | 674 | 23 | 0 | 1 | 674 | 52 | 725 | 0.0e+00 | 1291.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene25471 | 0.848106 | 7.57E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene25471 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene049368 | MS.gene25471 | 0.812291 | 4.56E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene25471 | 0.820015 | 8.58E-53 | -1.69E-46 |
| MS.gene049801 | MS.gene25471 | 0.814865 | 1.24E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene25471 | 0.855994 | 4.34E-62 | -1.69E-46 |
| MS.gene050551 | MS.gene25471 | 0.807632 | 4.60E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene25471 | 0.853135 | 2.92E-61 | -1.69E-46 |
| MS.gene050759 | MS.gene25471 | 0.807103 | 5.95E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene25471 | 0.831774 | 1.38E-55 | -1.69E-46 |
| MS.gene051147 | MS.gene25471 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene051184 | MS.gene25471 | 0.807554 | 4.78E-50 | -1.69E-46 |
| MS.gene051209 | MS.gene25471 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene25471 | 0.824796 | 6.65E-54 | -1.69E-46 |
| MS.gene051541 | MS.gene25471 | 0.839854 | 1.24E-57 | -1.69E-46 |
| MS.gene051800 | MS.gene25471 | 0.840386 | 8.97E-58 | -1.69E-46 |
| MS.gene051852 | MS.gene25471 | 0.810149 | 1.33E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene25471 | 0.822847 | 1.90E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene25471 | 0.824647 | 7.21E-54 | -1.69E-46 |
| MS.gene052168 | MS.gene25471 | 0.804746 | 1.86E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene25471 | 0.823236 | 1.54E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene25471 | 0.869056 | 4.12E-66 | -1.69E-46 |
| MS.gene052493 | MS.gene25471 | 0.848782 | 4.92E-60 | -1.69E-46 |
| MS.gene052609 | MS.gene25471 | 0.831933 | 1.26E-55 | -1.69E-46 |
| MS.gene052674 | MS.gene25471 | 0.818341 | 2.06E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene25471 | 0.818088 | 2.35E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene25471 | 0.820362 | 7.14E-53 | -1.69E-46 |
| MS.gene052681 | MS.gene25471 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene052775 | MS.gene25471 | 0.81433 | 1.63E-51 | -1.69E-46 |
| MS.gene052776 | MS.gene25471 | 0.811929 | 5.47E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene25471 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene25471 | 0.829708 | 4.43E-55 | -1.69E-46 |
| MS.gene053486 | MS.gene25471 | 0.8042 | 2.42E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene25471 | 0.83165 | 1.48E-55 | -1.69E-46 |
| MS.gene053726 | MS.gene25471 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene25471 | 0.806982 | 6.31E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene25471 | 0.847715 | 9.70E-60 | -1.69E-46 |
| MS.gene05454 | MS.gene25471 | 0.834648 | 2.65E-56 | -1.69E-46 |
| MS.gene054641 | MS.gene25471 | 0.845512 | 3.88E-59 | -1.69E-46 |
| MS.gene054892 | MS.gene25471 | 0.848666 | 5.30E-60 | -1.69E-46 |
| MS.gene054893 | MS.gene25471 | 0.849826 | 2.52E-60 | -1.69E-46 |
| MS.gene055231 | MS.gene25471 | 0.813552 | 2.42E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene25471 | 0.805445 | 1.33E-49 | -1.69E-46 |
| MS.gene055327 | MS.gene25471 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene25471 | 0.800142 | 1.66E-48 | -1.69E-46 |
| MS.gene055469 | MS.gene25471 | 0.81157 | 6.55E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene25471 | 0.849888 | 2.42E-60 | -1.69E-46 |
| MS.gene05552 | MS.gene25471 | 0.805895 | 1.07E-49 | -1.69E-46 |
| MS.gene055827 | MS.gene25471 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene25471 | 0.994248 | 1.00E-205 | -1.69E-46 |
| MS.gene055926 | MS.gene25471 | 0.816108 | 6.56E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene25471 | 0.820082 | 8.28E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene25471 | 0.833094 | 6.50E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene25471 | 0.811177 | 7.97E-51 | -1.69E-46 |
| MS.gene056390 | MS.gene25471 | 0.817999 | 2.46E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene25471 | 0.807535 | 4.82E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene25471 | 0.814395 | 1.57E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene25471 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene25471 | 0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene25471 | 0.803876 | 2.83E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene25471 | 0.826303 | 2.92E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene25471 | 0.811793 | 5.86E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene25471 | 0.812157 | 4.88E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene25471 | 0.819365 | 1.21E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene25471 | 0.872145 | 3.98E-67 | -1.69E-46 |
| MS.gene058095 | MS.gene25471 | 0.819738 | 9.92E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene25471 | 0.806934 | 6.46E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene25471 | 0.872777 | 2.45E-67 | -1.69E-46 |
| MS.gene058292 | MS.gene25471 | 0.821321 | 4.30E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene25471 | 0.860065 | 2.68E-63 | -1.69E-46 |
| MS.gene058758 | MS.gene25471 | 0.815221 | 1.03E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene25471 | 0.820171 | 7.90E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene25471 | 0.812299 | 4.55E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene25471 | 0.856105 | 4.03E-62 | -1.69E-46 |
| MS.gene059439 | MS.gene25471 | 0.824679 | 7.08E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene25471 | 0.823529 | 1.32E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene25471 | 0.810123 | 1.35E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene25471 | 0.811004 | 8.69E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene25471 | 0.833744 | 4.47E-56 | -1.69E-46 |
| MS.gene060259 | MS.gene25471 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene060380 | MS.gene25471 | 0.8228 | 1.95E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene25471 | 0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene25471 | 0.857223 | 1.89E-62 | -1.69E-46 |
| MS.gene060520 | MS.gene25471 | 0.8198 | 9.60E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene25471 | 0.861705 | 8.50E-64 | -1.69E-46 |
| MS.gene060637 | MS.gene25471 | 0.800277 | 1.55E-48 | -1.69E-46 |
| MS.gene060777 | MS.gene25471 | 0.812248 | 4.67E-51 | -1.69E-46 |
| MS.gene060785 | MS.gene25471 | 0.821035 | 5.00E-53 | -1.69E-46 |
| MS.gene060850 | MS.gene25471 | 0.833807 | 4.31E-56 | -1.69E-46 |
| MS.gene060851 | MS.gene25471 | 0.828367 | 9.35E-55 | -1.69E-46 |
| MS.gene060852 | MS.gene25471 | 0.82653 | 2.58E-54 | -1.69E-46 |
| MS.gene06089 | MS.gene25471 | 0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene25471 | 0.860564 | 1.89E-63 | -1.69E-46 |
| MS.gene060933 | MS.gene25471 | 0.822789 | 1.96E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene25471 | 0.814618 | 1.41E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene25471 | 0.803263 | 3.79E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene25471 | 0.840733 | 7.28E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59505 | MS.gene25471 | PPI |
| MS.gene036510 | MS.gene25471 | PPI |
| MS.gene073670 | MS.gene25471 | PPI |
| MS.gene25471 | MS.gene068166 | PPI |
| MS.gene073389 | MS.gene25471 | PPI |
| MS.gene055864 | MS.gene25471 | PPI |
| MS.gene96241 | MS.gene25471 | PPI |
| MS.gene25471 | MS.gene67485 | PPI |
| MS.gene068164 | MS.gene25471 | PPI |
| MS.gene52721 | MS.gene25471 | PPI |
| MS.gene040706 | MS.gene25471 | PPI |
| MS.gene34691 | MS.gene25471 | PPI |
| MS.gene58919 | MS.gene25471 | PPI |
| MS.gene073674 | MS.gene25471 | PPI |
| MS.gene041539 | MS.gene25471 | PPI |
| MS.gene035311 | MS.gene25471 | PPI |
| MS.gene04676 | MS.gene25471 | PPI |
| MS.gene25471 | MS.gene84069 | PPI |
| MS.gene00337 | MS.gene25471 | PPI |
| MS.gene35971 | MS.gene25471 | PPI |
| MS.gene91206 | MS.gene25471 | PPI |
| MS.gene25471 | MS.gene002729 | PPI |
| MS.gene64806 | MS.gene25471 | PPI |
| MS.gene25471 | MS.gene004599 | PPI |
| MS.gene004416 | MS.gene25471 | PPI |
| MS.gene055944 | MS.gene25471 | PPI |
| MS.gene25469 | MS.gene25471 | PPI |
| MS.gene84072 | MS.gene25471 | PPI |
| MS.gene040704 | MS.gene25471 | PPI |
| MS.gene25471 | MS.gene60611 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25471.t1 | MTR_8g056030 | 97.923 | 674 | 14 | 0 | 1 | 674 | 58 | 731 | 0.0 | 1374 |
| MS.gene25471.t1 | MTR_5g039880 | 81.454 | 674 | 125 | 0 | 1 | 674 | 59 | 732 | 0.0 | 1157 |
| MS.gene25471.t1 | MTR_7g039690 | 77.893 | 674 | 125 | 1 | 1 | 674 | 59 | 708 | 0.0 | 1093 |
| MS.gene25471.t1 | MTR_7g039660 | 77.893 | 674 | 138 | 2 | 1 | 674 | 58 | 720 | 0.0 | 1089 |
| MS.gene25471.t1 | MTR_6g011700 | 74.926 | 674 | 145 | 1 | 1 | 674 | 56 | 705 | 0.0 | 1037 |
| MS.gene25471.t1 | MTR_6g011770 | 71.810 | 674 | 166 | 1 | 1 | 674 | 56 | 705 | 0.0 | 989 |
| MS.gene25471.t1 | MTR_1g040925 | 75.753 | 598 | 127 | 2 | 79 | 674 | 360 | 941 | 0.0 | 932 |
| MS.gene25471.t1 | MTR_1g040925 | 72.881 | 295 | 80 | 0 | 1 | 295 | 65 | 359 | 1.21e-146 | 450 |
| MS.gene25471.t1 | MTR_1g040995 | 77.586 | 522 | 115 | 1 | 79 | 598 | 360 | 881 | 0.0 | 838 |
| MS.gene25471.t1 | MTR_1g040995 | 72.881 | 295 | 80 | 0 | 1 | 295 | 65 | 359 | 5.17e-147 | 449 |
| MS.gene25471.t1 | MTR_5g039770 | 56.490 | 678 | 267 | 6 | 1 | 674 | 1 | 654 | 0.0 | 763 |
| MS.gene25471.t1 | MTR_7g039790 | 56.765 | 680 | 261 | 7 | 1 | 674 | 65 | 717 | 0.0 | 760 |
| MS.gene25471.t1 | MTR_7g445240 | 55.030 | 676 | 263 | 6 | 1 | 674 | 65 | 701 | 0.0 | 728 |
| MS.gene25471.t1 | MTR_5g040040 | 64.773 | 528 | 79 | 5 | 147 | 674 | 166 | 586 | 0.0 | 657 |
| MS.gene25471.t1 | MTR_5g039890 | 69.853 | 408 | 78 | 2 | 1 | 363 | 56 | 463 | 0.0 | 569 |
| MS.gene25471.t1 | MTR_2g019260 | 41.194 | 687 | 371 | 14 | 1 | 674 | 126 | 792 | 8.39e-168 | 500 |
| MS.gene25471.t1 | MTR_5g040180 | 71.885 | 313 | 87 | 1 | 1 | 313 | 48 | 359 | 1.11e-162 | 472 |
| MS.gene25471.t1 | MTR_7g039680 | 71.207 | 323 | 69 | 3 | 1 | 322 | 56 | 355 | 1.56e-158 | 461 |
| MS.gene25471.t1 | MTR_2g019260 | 40.553 | 651 | 356 | 13 | 1 | 638 | 126 | 758 | 2.44e-154 | 465 |
| MS.gene25471.t1 | MTR_7g039440 | 71.622 | 296 | 83 | 1 | 18 | 313 | 1 | 295 | 2.78e-153 | 445 |
| MS.gene25471.t1 | MTR_7g039430 | 71.886 | 281 | 78 | 1 | 1 | 281 | 48 | 327 | 1.06e-142 | 420 |
| MS.gene25471.t1 | MTR_5g040190 | 68.683 | 281 | 87 | 1 | 1 | 281 | 48 | 327 | 3.37e-135 | 401 |
| MS.gene25471.t1 | MTR_7g108340 | 35.878 | 655 | 392 | 11 | 38 | 674 | 91 | 735 | 1.83e-130 | 402 |
| MS.gene25471.t1 | MTR_2g437390 | 34.564 | 677 | 409 | 12 | 22 | 674 | 76 | 742 | 1.40e-129 | 400 |
| MS.gene25471.t1 | MTR_4g119413 | 35.000 | 660 | 397 | 11 | 38 | 674 | 94 | 744 | 8.47e-127 | 393 |
| MS.gene25471.t1 | MTR_1g040965 | 81.019 | 216 | 41 | 0 | 459 | 674 | 3 | 218 | 1.43e-122 | 363 |
| MS.gene25471.t1 | MTR_4g119413 | 33.065 | 496 | 306 | 9 | 38 | 510 | 94 | 586 | 1.26e-85 | 281 |
| MS.gene25471.t1 | MTR_5g040230 | 72.956 | 159 | 43 | 0 | 1 | 159 | 109 | 267 | 7.83e-77 | 247 |
| MS.gene25471.t1 | MTR_7g039380 | 71.698 | 159 | 45 | 0 | 1 | 159 | 48 | 206 | 1.59e-76 | 244 |
| MS.gene25471.t1 | MTR_7g039770 | 59.434 | 106 | 41 | 1 | 406 | 509 | 1 | 106 | 3.37e-37 | 137 |
| MS.gene25471.t1 | MTR_7g039770 | 64.130 | 92 | 33 | 0 | 583 | 674 | 105 | 196 | 1.52e-30 | 119 |
| MS.gene25471.t1 | MTR_7g445230 | 59.434 | 106 | 41 | 1 | 406 | 509 | 1 | 106 | 3.37e-37 | 137 |
| MS.gene25471.t1 | MTR_7g445230 | 64.130 | 92 | 33 | 0 | 583 | 674 | 105 | 196 | 1.52e-30 | 119 |
| MS.gene25471.t1 | MTR_5g039820 | 44.512 | 164 | 51 | 2 | 511 | 674 | 1 | 124 | 7.54e-32 | 120 |
| MS.gene25471.t1 | MTR_1g099430 | 40.870 | 115 | 30 | 2 | 560 | 674 | 19 | 95 | 8.00e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25471.t1 | AT1G26830 | 81.602 | 674 | 124 | 0 | 1 | 674 | 59 | 732 | 0.0 | 1177 |
| MS.gene25471.t1 | AT1G69670 | 80.564 | 674 | 131 | 0 | 1 | 674 | 59 | 732 | 0.0 | 1163 |
| MS.gene25471.t1 | AT1G69670 | 80.564 | 674 | 131 | 0 | 1 | 674 | 59 | 732 | 0.0 | 1163 |
| MS.gene25471.t1 | AT5G46210 | 40.703 | 683 | 380 | 13 | 1 | 674 | 126 | 792 | 1.90e-159 | 479 |
| MS.gene25471.t1 | AT4G02570 | 35.258 | 658 | 395 | 11 | 38 | 674 | 91 | 738 | 5.05e-132 | 406 |
| MS.gene25471.t1 | AT4G02570 | 35.258 | 658 | 395 | 11 | 38 | 674 | 91 | 738 | 5.05e-132 | 406 |
| MS.gene25471.t1 | AT4G02570 | 35.258 | 658 | 395 | 11 | 38 | 674 | 91 | 738 | 5.05e-132 | 406 |
| MS.gene25471.t1 | AT4G02570 | 35.258 | 658 | 395 | 11 | 38 | 674 | 91 | 738 | 5.05e-132 | 406 |
| MS.gene25471.t1 | AT1G02980 | 33.234 | 674 | 416 | 12 | 25 | 674 | 79 | 742 | 5.11e-116 | 365 |
| MS.gene25471.t1 | AT1G02980 | 33.234 | 674 | 416 | 12 | 25 | 674 | 79 | 742 | 5.11e-116 | 365 |
| MS.gene25471.t1 | AT1G43140 | 32.263 | 685 | 418 | 16 | 6 | 674 | 67 | 721 | 1.10e-103 | 332 |
| MS.gene25471.t1 | AT1G59790 | 26.962 | 293 | 201 | 6 | 22 | 308 | 79 | 364 | 3.93e-29 | 120 |
| MS.gene25471.t1 | AT1G59790 | 27.530 | 247 | 170 | 5 | 22 | 262 | 79 | 322 | 1.38e-26 | 112 |
| MS.gene25471.t1 | AT1G59800 | 29.775 | 178 | 120 | 2 | 22 | 196 | 72 | 247 | 3.78e-22 | 97.1 |
| MS.gene25471.t1 | AT4G12100 | 22.388 | 268 | 181 | 8 | 6 | 259 | 118 | 372 | 1.89e-12 | 70.5 |
Find 139 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGGATCCTTCAATCTTTC+AGG | 0.166080 | 8.3:-42969276 | None:intergenic |
| AATATGGTGCTTCACAAATT+TGG | 0.198790 | 8.3:+42968481 | None:intergenic |
| CACAACACTCAATGAATCTT+TGG | 0.228824 | 8.3:-42968945 | None:intergenic |
| TACTCATCGGCTCCTTTCTA+AGG | 0.269735 | 8.3:-42970133 | None:intergenic |
| TTAATCCATATGGAGAATTC+TGG | 0.298338 | 8.3:+42969108 | MS.gene25471:CDS |
| AAACTATACAAGGTTAAAAT+AGG | 0.302125 | 8.3:+42970206 | MS.gene25471:CDS |
| ACAATCATTGGCTTTAGTTA+AGG | 0.303291 | 8.3:+42970100 | MS.gene25471:CDS |
| TGATGATAAATATGAAGATT+TGG | 0.316741 | 8.3:+42969149 | MS.gene25471:CDS |
| CAATCATTGGCTTTAGTTAA+GGG | 0.333046 | 8.3:+42970101 | MS.gene25471:CDS |
| ACGAGGAATTCAAAGCATTC+TGG | 0.343800 | 8.3:-42969380 | None:intergenic |
| GCAGACTTAAAAGCAACCTT+TGG | 0.354772 | 8.3:+42969939 | MS.gene25471:CDS |
| CTGCACTTTGCGAGAAGTTT+CGG | 0.357858 | 8.3:+42969856 | MS.gene25471:CDS |
| TCGGCTACTGAACACACTTC+TGG | 0.360939 | 8.3:+42968768 | MS.gene25471:CDS |
| TAAGAGATGTCTACAATCAT+TGG | 0.371194 | 8.3:+42970088 | MS.gene25471:CDS |
| TCAGTTTACATCAAAATTAG+AGG | 0.377339 | 8.3:+42969674 | MS.gene25471:CDS |
| ATGCGTTTCTTGACCTCTGT+TGG | 0.385513 | 8.3:-42970413 | None:intergenic |
| AGTTTCCTGTTTCTCAGGTT+CGG | 0.385761 | 8.3:-42970252 | None:intergenic |
| TGCCGAGTTTCCTGTTTCTC+AGG | 0.386423 | 8.3:-42970257 | None:intergenic |
| TGGAAGAACTGAACAGGAAA+TGG | 0.387376 | 8.3:+42968596 | MS.gene25471:CDS |
| ACTGTCCAGGTTCTTACAAC+AGG | 0.395150 | 8.3:+42969783 | MS.gene25471:CDS |
| TGAAATGAACTCTGGAGAAC+GGG | 0.408147 | 8.3:-42969427 | None:intergenic |
| GTAGGACCGTCGCCTAAGTC+AGG | 0.411159 | 8.3:-42969756 | None:intergenic |
| GGAATCCGAACCTGAGAAAC+AGG | 0.414007 | 8.3:+42970247 | MS.gene25471:CDS |
| TCATTTATTCCAACCAGATC+AGG | 0.420558 | 8.3:+42968743 | MS.gene25471:CDS |
| TATTACCTTGGCACACATAC+TGG | 0.423807 | 8.3:+42969882 | MS.gene25471:CDS |
| ACAACACTCAATGAATCTTT+GGG | 0.423919 | 8.3:-42968944 | None:intergenic |
| CAGCATTATTGAAAAGCATA+AGG | 0.426039 | 8.3:-42970010 | None:intergenic |
| GATGATAAATATGAAGATTT+GGG | 0.429458 | 8.3:+42969150 | MS.gene25471:CDS |
| AGCCTCTGCACAAACTCAAC+TGG | 0.433380 | 8.3:-42969294 | None:intergenic |
| CATGCTCAGATTAATCCATA+TGG | 0.434059 | 8.3:+42969098 | MS.gene25471:CDS |
| ACTTCACACATAAGGGAATC+TGG | 0.436605 | 8.3:+42969234 | MS.gene25471:CDS |
| AGGAACTGTAGTTGCACAAA+AGG | 0.436933 | 8.3:+42970226 | MS.gene25471:CDS |
| GTCGCCTAAGTCAGGGTGGC+TGG | 0.440169 | 8.3:-42969748 | None:intergenic |
| TACTGATCCTGAAAGATTGA+AGG | 0.441993 | 8.3:+42969269 | MS.gene25471:CDS |
| ACTTGTCATTGTTGAATGCC+AGG | 0.444070 | 8.3:-42969353 | None:intergenic |
| AACTCGGCAGCGAGTGGAGG+AGG | 0.446158 | 8.3:+42970271 | MS.gene25471:CDS |
| AAAGCATAAGGACACACATT+TGG | 0.448174 | 8.3:-42969998 | None:intergenic |
| GGCAGCGAGTGGAGGAGGAC+AGG | 0.448240 | 8.3:+42970276 | MS.gene25471:CDS |
| GAAGTATTATAAACAGCATC+TGG | 0.448249 | 8.3:+42969569 | MS.gene25471:CDS |
| CTAAACCAGAATTCTCCATA+TGG | 0.453764 | 8.3:-42969113 | None:intergenic |
| TAGTGAGGATCATGAAATCT+AGG | 0.463511 | 8.3:+42970321 | MS.gene25471:CDS |
| TATGCCAGCCACCCTGACTT+AGG | 0.464316 | 8.3:+42969744 | MS.gene25471:CDS |
| TGCTTCACAAATTTGGTGAT+AGG | 0.469912 | 8.3:+42968488 | MS.gene25471:CDS |
| TGTAGATGATAAACTTCGTA+AGG | 0.470956 | 8.3:+42969455 | MS.gene25471:CDS |
| AGCAACTGAGATTCCTGCTC+CGG | 0.471327 | 8.3:+42970061 | MS.gene25471:CDS |
| AGGTGATGACTTCACACATA+AGG | 0.478646 | 8.3:+42969226 | MS.gene25471:CDS |
| CAGTCTCGGGATCCATGTAA+TGG | 0.479832 | 8.3:-42969029 | None:intergenic |
| ACTGGTGAAGTTATTGATAG+AGG | 0.485538 | 8.3:+42968811 | MS.gene25471:CDS |
| AACCTCTCAGGACACAATGC+AGG | 0.487006 | 8.3:+42969716 | MS.gene25471:CDS |
| TGAAAAGAAGATTAATAAAG+TGG | 0.488330 | 8.3:+42969050 | MS.gene25471:CDS |
| TCAGTAGCCGAGTCCTGATC+TGG | 0.488597 | 8.3:-42968756 | None:intergenic |
| AGGTTCTTACAACAGGGTCT+TGG | 0.488962 | 8.3:+42969790 | MS.gene25471:CDS |
| TTCATTGAGTGTTGTGATTG+TGG | 0.489826 | 8.3:+42968952 | MS.gene25471:CDS |
| TTCAGCCCGAGTTCATGAAC+AGG | 0.490428 | 8.3:-42968703 | None:intergenic |
| GAGGCGTCTGAATGAGGAAA+TGG | 0.490900 | 8.3:+42968996 | MS.gene25471:CDS |
| CGGTCCTACGCTTACTGTCC+AGG | 0.496060 | 8.3:+42969770 | MS.gene25471:CDS |
| AACTTCGTAAGGGTCTGAAA+GGG | 0.499438 | 8.3:+42969466 | MS.gene25471:CDS |
| GGTGATGACTTCACACATAA+GGG | 0.500163 | 8.3:+42969227 | MS.gene25471:CDS |
| CAGACTTAAAAGCAACCTTT+GGG | 0.500900 | 8.3:+42969940 | MS.gene25471:CDS |
| TGATAGGTTGTACTCAGGAT+TGG | 0.503047 | 8.3:+42968504 | MS.gene25471:CDS |
| AAGACTCCTGTTCATGAACT+CGG | 0.516778 | 8.3:+42968697 | MS.gene25471:CDS |
| TGACCTCTGTTGGATTTGCA+AGG | 0.526865 | 8.3:-42970403 | None:intergenic |
| AAACTTCGTAAGGGTCTGAA+AGG | 0.527114 | 8.3:+42969465 | MS.gene25471:CDS |
| GGGAAGAAATGTCCTTAGAA+AGG | 0.527346 | 8.3:+42970121 | MS.gene25471:CDS |
| ACAAATAGTGAAATGAACTC+TGG | 0.529442 | 8.3:-42969435 | None:intergenic |
| AGCTGAGAGGCGTCTGAATG+AGG | 0.532045 | 8.3:+42968990 | MS.gene25471:CDS |
| TGTAGACATCTCTTAAGATC+CGG | 0.532519 | 8.3:-42970080 | None:intergenic |
| GTGCAGATATTTCCACCGGC+AGG | 0.534110 | 8.3:-42969839 | None:intergenic |
| GAGTATTACGTGCAACCTGC+CGG | 0.536343 | 8.3:+42969824 | MS.gene25471:CDS |
| CTGGTGAAGTTATTGATAGA+GGG | 0.538344 | 8.3:+42968812 | MS.gene25471:CDS |
| ATTGTCGTGGCAAACTAACA+TGG | 0.547488 | 8.3:+42969911 | MS.gene25471:CDS |
| TACAGACATGAAAACCTCTC+AGG | 0.548291 | 8.3:+42969704 | MS.gene25471:CDS |
| GGACAGGAAGCCTCAGATTG+AGG | 0.548487 | 8.3:+42970292 | MS.gene25471:CDS |
| ATGAACTCGGGCTGAATCTG+TGG | 0.550756 | 8.3:+42968710 | MS.gene25471:CDS |
| GGATAGAGTTAGCCATTACA+TGG | 0.551642 | 8.3:+42969017 | MS.gene25471:CDS |
| AAGTTTCGGTCTTATTACCT+TGG | 0.552048 | 8.3:+42969870 | MS.gene25471:CDS |
| AAGACCCTGTTGTAAGAACC+TGG | 0.553834 | 8.3:-42969788 | None:intergenic |
| TTTGGTGATAGGTTGTACTC+AGG | 0.562234 | 8.3:+42968499 | MS.gene25471:CDS |
| CTTAAAAGCAACCTTTGGGA+AGG | 0.563218 | 8.3:+42969944 | MS.gene25471:CDS |
| TGTAAACTGATAGCCACATT+CGG | 0.563890 | 8.3:-42969661 | None:intergenic |
| AAATCTATTGAAGCAGCTCA+AGG | 0.568181 | 8.3:+42968562 | MS.gene25471:CDS |
| TGCTGATAAACTTAGCTACA+AGG | 0.569495 | 8.3:+42970028 | MS.gene25471:CDS |
| AGACTCCTGTTCATGAACTC+GGG | 0.571232 | 8.3:+42968698 | MS.gene25471:CDS |
| CATCTCTTAAGATCCGGAGC+AGG | 0.571367 | 8.3:-42970074 | None:intergenic |
| ACCTTGGCACACATACTGGC+AGG | 0.571727 | 8.3:+42969886 | MS.gene25471:CDS |
| GTGAAATGAACTCTGGAGAA+CGG | 0.575403 | 8.3:-42969428 | None:intergenic |
| ACAGGAAACTCGGCAGCGAG+TGG | 0.580836 | 8.3:+42970265 | MS.gene25471:CDS |
| AGCCACCCTGACTTAGGCGA+CGG | 0.585562 | 8.3:+42969750 | MS.gene25471:CDS |
| TTAAAAGCAACCTTTGGGAA+GGG | 0.586426 | 8.3:+42969945 | MS.gene25471:CDS |
| ACTATCGCCGCCTCAATCTG+AGG | 0.586727 | 8.3:-42970302 | None:intergenic |
| ATAAATATGAAGATTTGGGT+AGG | 0.586773 | 8.3:+42969154 | MS.gene25471:CDS |
| TCCTGCCAGTATGTGTGCCA+AGG | 0.587792 | 8.3:-42969887 | None:intergenic |
| ATACGACAAGATTATAAACC+TGG | 0.588266 | 8.3:+42969335 | MS.gene25471:CDS |
| GGATGATGTAGAGGTTACTC+TGG | 0.590036 | 8.3:+42969497 | MS.gene25471:CDS |
| CATAAGGACACACATTTGGT+AGG | 0.591138 | 8.3:-42969994 | None:intergenic |
| CAGTTTACATCAAAATTAGA+GGG | 0.591739 | 8.3:+42969675 | MS.gene25471:CDS |
| AACCTGAGAAACAGGAAACT+CGG | 0.594659 | 8.3:+42970255 | MS.gene25471:CDS |
| CAAAGTGCAGATATTTCCAC+CGG | 0.598009 | 8.3:-42969843 | None:intergenic |
| ATTCCAACCAGATCAGGACT+CGG | 0.601328 | 8.3:+42968749 | MS.gene25471:CDS |
| ATGCTTCTGACCCTTCCCAA+AGG | 0.602178 | 8.3:-42969955 | None:intergenic |
| CTTAACAATGAGACTTCTCT+CGG | 0.603477 | 8.3:-42969631 | None:intergenic |
| TCACCAACATCTTTACTCAT+CGG | 0.604309 | 8.3:-42970146 | None:intergenic |
| TAGAGATATACTGATGTACA+TGG | 0.604770 | 8.3:+42968648 | MS.gene25471:CDS |
| AATTCTTGAGCATAAACAGA+TGG | 0.606533 | 8.3:-42968874 | None:intergenic |
| GTAGATGATAAACTTCGTAA+GGG | 0.607058 | 8.3:+42969456 | MS.gene25471:CDS |
| CACGTAATACTCGACTGAGT+TGG | 0.607158 | 8.3:-42969813 | None:intergenic |
| CTGTCCAGGTTCTTACAACA+GGG | 0.608852 | 8.3:+42969784 | MS.gene25471:CDS |
| ACCTCTCAGGACACAATGCA+GGG | 0.612857 | 8.3:+42969717 | MS.gene25471:CDS |
| TAGGACCGTCGCCTAAGTCA+GGG | 0.612941 | 8.3:-42969755 | None:intergenic |
| GGAAACTCGGCAGCGAGTGG+AGG | 0.615424 | 8.3:+42970268 | MS.gene25471:CDS |
| GTTAAGCTCAAGACCGAATG+TGG | 0.616613 | 8.3:+42969648 | MS.gene25471:CDS |
| AAAGAAGATTAATAAAGTGG+TGG | 0.620743 | 8.3:+42969053 | MS.gene25471:CDS |
| TAGCCGAGTCCTGATCTGGT+TGG | 0.622232 | 8.3:-42968752 | None:intergenic |
| AGATTGAGGCGGCGATAGTG+AGG | 0.627417 | 8.3:+42970306 | MS.gene25471:CDS |
| GAAATGAACTCTGGAGAACG+GGG | 0.628544 | 8.3:-42969426 | None:intergenic |
| ATAAACAGCATCTGGCAAAG+AGG | 0.630265 | 8.3:+42969577 | MS.gene25471:CDS |
| GTTCAGTAGTAAACTATACA+AGG | 0.638422 | 8.3:+42970196 | MS.gene25471:CDS |
| CAGGAAGCCTCAGATTGAGG+CGG | 0.640359 | 8.3:+42970295 | MS.gene25471:CDS |
| GGTCAACGAGGATGATGTAG+AGG | 0.645668 | 8.3:+42969488 | MS.gene25471:CDS |
| GAGCCGATGAGTAAAGATGT+TGG | 0.646356 | 8.3:+42970143 | MS.gene25471:CDS |
| ACTTCGTAAGGGTCTGAAAG+GGG | 0.649523 | 8.3:+42969467 | MS.gene25471:CDS |
| TTGTCGTGGCAAACTAACAT+GGG | 0.652331 | 8.3:+42969912 | MS.gene25471:CDS |
| GCCCTGCATTGTGTCCTGAG+AGG | 0.655976 | 8.3:-42969718 | None:intergenic |
| TTAGTACATAGTGAACGCAC+TGG | 0.661997 | 8.3:+42968793 | MS.gene25471:CDS |
| TATTACGTGCAACCTGCCGG+TGG | 0.663897 | 8.3:+42969827 | MS.gene25471:CDS |
| TTGTTCCGTCGTGTAACCGA+CGG | 0.664584 | 8.3:+42969186 | MS.gene25471:CDS |
| TGTAGAGGTTACTCTGGACA+AGG | 0.664682 | 8.3:+42969503 | MS.gene25471:CDS |
| ATCCAGTTGAGTTTGTGCAG+AGG | 0.670411 | 8.3:+42969292 | MS.gene25471:CDS |
| GACCGTCGCCTAAGTCAGGG+TGG | 0.696070 | 8.3:-42969752 | None:intergenic |
| TTTCCTTGCAAATCCAACAG+AGG | 0.698003 | 8.3:+42970400 | MS.gene25471:CDS |
| AGAACCTGGACAGTAAGCGT+AGG | 0.706663 | 8.3:-42969774 | None:intergenic |
| TCTATTGAAGCAGCTCAAGG+AGG | 0.716304 | 8.3:+42968565 | MS.gene25471:CDS |
| GGGTCTGAAAGGGGTCAACG+AGG | 0.729389 | 8.3:+42969476 | MS.gene25471:CDS |
| GTTAATGAAATATTCAAACG+AGG | 0.733246 | 8.3:-42969397 | None:intergenic |
| GATGAGTAAAGATGTTGGTG+AGG | 0.734708 | 8.3:+42970148 | MS.gene25471:CDS |
| AAATGAACTCTGGAGAACGG+GGG | 0.742959 | 8.3:-42969425 | None:intergenic |
| ATACTGGCAGGAGATTGTCG+TGG | 0.746214 | 8.3:+42969898 | MS.gene25471:CDS |
| AAAGACCGTCGGTTACACGA+CGG | 0.749089 | 8.3:-42969191 | None:intergenic |
| ATTATCTTAAGAAAGCTGAG+AGG | 0.761790 | 8.3:+42968977 | MS.gene25471:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAACAAAAATGCTAA+TGG | + | chr8.3:42968843-42968862 | MS.gene25471:CDS | 15.0% |
| !! | AAACTATACAAGGTTAAAAT+AGG | + | chr8.3:42970206-42970225 | MS.gene25471:CDS | 20.0% |
| !! | GATGATAAATATGAAGATTT+GGG | + | chr8.3:42969150-42969169 | MS.gene25471:CDS | 20.0% |
| !! | TGAAAAGAAGATTAATAAAG+TGG | + | chr8.3:42969050-42969069 | MS.gene25471:CDS | 20.0% |
| !! | TGATGATAAATATGAAGATT+TGG | + | chr8.3:42969149-42969168 | MS.gene25471:CDS | 20.0% |
| ! | AAAGAAGATTAATAAAGTGG+TGG | + | chr8.3:42969053-42969072 | MS.gene25471:CDS | 25.0% |
| ! | ATAAATATGAAGATTTGGGT+AGG | + | chr8.3:42969154-42969173 | MS.gene25471:CDS | 25.0% |
| ! | ATAACGACAGAAAAATGTAT+CGG | + | chr8.3:42970474-42970493 | MS.gene25471:CDS | 25.0% |
| ! | CAGTTTACATCAAAATTAGA+GGG | + | chr8.3:42969675-42969694 | MS.gene25471:CDS | 25.0% |
| ! | GTTAATGAAATATTCAAACG+AGG | - | chr8.3:42969400-42969419 | None:intergenic | 25.0% |
| ! | TCAGTTTACATCAAAATTAG+AGG | + | chr8.3:42969674-42969693 | MS.gene25471:CDS | 25.0% |
| !! | ATTAATCTTCTTTTCAGTCT+CGG | - | chr8.3:42969046-42969065 | None:intergenic | 25.0% |
| !!! | ACAAAAATGCTAATGGATTT+AGG | + | chr8.3:42968850-42968869 | MS.gene25471:CDS | 25.0% |
| AATTCTTGAGCATAAACAGA+TGG | - | chr8.3:42968877-42968896 | None:intergenic | 30.0% | |
| ACAAATAGTGAAATGAACTC+TGG | - | chr8.3:42969438-42969457 | None:intergenic | 30.0% | |
| ACAACACTCAATGAATCTTT+GGG | - | chr8.3:42968947-42968966 | None:intergenic | 30.0% | |
| ATACGACAAGATTATAAACC+TGG | + | chr8.3:42969335-42969354 | MS.gene25471:CDS | 30.0% | |
| ATTATCTTAAGAAAGCTGAG+AGG | + | chr8.3:42968977-42968996 | MS.gene25471:CDS | 30.0% | |
| GTAGATGATAAACTTCGTAA+GGG | + | chr8.3:42969456-42969475 | MS.gene25471:CDS | 30.0% | |
| GTTCAGTAGTAAACTATACA+AGG | + | chr8.3:42970196-42970215 | MS.gene25471:CDS | 30.0% | |
| TAAGAGATGTCTACAATCAT+TGG | + | chr8.3:42970088-42970107 | MS.gene25471:CDS | 30.0% | |
| TAGAGATATACTGATGTACA+TGG | + | chr8.3:42968648-42968667 | MS.gene25471:CDS | 30.0% | |
| TGTAGATGATAAACTTCGTA+AGG | + | chr8.3:42969455-42969474 | MS.gene25471:CDS | 30.0% | |
| TTAATCCATATGGAGAATTC+TGG | + | chr8.3:42969108-42969127 | MS.gene25471:CDS | 30.0% | |
| ! | CAGCATTATTGAAAAGCATA+AGG | - | chr8.3:42970013-42970032 | None:intergenic | 30.0% |
| ! | CATCTTTTTCTTGCAAGTAT+CGG | - | chr8.3:42969542-42969561 | None:intergenic | 30.0% |
| ! | GAAGTATTATAAACAGCATC+TGG | + | chr8.3:42969569-42969588 | MS.gene25471:CDS | 30.0% |
| ! | TTAATCTTCTTTTCAGTCTC+GGG | - | chr8.3:42969045-42969064 | None:intergenic | 30.0% |
| !! | ACAATCATTGGCTTTAGTTA+AGG | + | chr8.3:42970100-42970119 | MS.gene25471:CDS | 30.0% |
| !! | CAATCATTGGCTTTAGTTAA+GGG | + | chr8.3:42970101-42970120 | MS.gene25471:CDS | 30.0% |
| AAAGCATAAGGACACACATT+TGG | - | chr8.3:42970001-42970020 | None:intergenic | 35.0% | |
| AAATCTATTGAAGCAGCTCA+AGG | + | chr8.3:42968562-42968581 | MS.gene25471:CDS | 35.0% | |
| ACTGGTGAAGTTATTGATAG+AGG | + | chr8.3:42968811-42968830 | MS.gene25471:CDS | 35.0% | |
| CACAACACTCAATGAATCTT+TGG | - | chr8.3:42968948-42968967 | None:intergenic | 35.0% | |
| CAGACTTAAAAGCAACCTTT+GGG | + | chr8.3:42969940-42969959 | MS.gene25471:CDS | 35.0% | |
| CATGCTCAGATTAATCCATA+TGG | + | chr8.3:42969098-42969117 | MS.gene25471:CDS | 35.0% | |
| CTAAACCAGAATTCTCCATA+TGG | - | chr8.3:42969116-42969135 | None:intergenic | 35.0% | |
| CTGGTGAAGTTATTGATAGA+GGG | + | chr8.3:42968812-42968831 | MS.gene25471:CDS | 35.0% | |
| CTTAACAATGAGACTTCTCT+CGG | - | chr8.3:42969634-42969653 | None:intergenic | 35.0% | |
| TACTGATCCTGAAAGATTGA+AGG | + | chr8.3:42969269-42969288 | MS.gene25471:CDS | 35.0% | |
| TAGTGAGGATCATGAAATCT+AGG | + | chr8.3:42970321-42970340 | MS.gene25471:CDS | 35.0% | |
| TCACCAACATCTTTACTCAT+CGG | - | chr8.3:42970149-42970168 | None:intergenic | 35.0% | |
| TCATTTATTCCAACCAGATC+AGG | + | chr8.3:42968743-42968762 | MS.gene25471:CDS | 35.0% | |
| TGCTGATAAACTTAGCTACA+AGG | + | chr8.3:42970028-42970047 | MS.gene25471:CDS | 35.0% | |
| TGTAAACTGATAGCCACATT+CGG | - | chr8.3:42969664-42969683 | None:intergenic | 35.0% | |
| TGTAGACATCTCTTAAGATC+CGG | - | chr8.3:42970083-42970102 | None:intergenic | 35.0% | |
| ! | TCGTATTTTCAAAAGACCGT+CGG | - | chr8.3:42969205-42969224 | None:intergenic | 35.0% |
| ! | TGCTTCACAAATTTGGTGAT+AGG | + | chr8.3:42968488-42968507 | MS.gene25471:CDS | 35.0% |
| ! | TTAAAAGCAACCTTTGGGAA+GGG | + | chr8.3:42969945-42969964 | MS.gene25471:CDS | 35.0% |
| ! | TTCATGAACAGGAGTCTTTT+TGG | - | chr8.3:42968695-42968714 | None:intergenic | 35.0% |
| ! | TTCATTGAGTGTTGTGATTG+TGG | + | chr8.3:42968952-42968971 | MS.gene25471:CDS | 35.0% |
| !! | AAGTTTCGGTCTTATTACCT+TGG | + | chr8.3:42969870-42969889 | MS.gene25471:CDS | 35.0% |
| !! | AGTTTCAGCTGAGTTTTATC+AGG | + | chr8.3:42968915-42968934 | MS.gene25471:CDS | 35.0% |
| AAACTTCGTAAGGGTCTGAA+AGG | + | chr8.3:42969465-42969484 | MS.gene25471:CDS | 40.0% | |
| AACCTGAGAAACAGGAAACT+CGG | + | chr8.3:42970255-42970274 | MS.gene25471:CDS | 40.0% | |
| AACTTCGTAAGGGTCTGAAA+GGG | + | chr8.3:42969466-42969485 | MS.gene25471:CDS | 40.0% | |
| AAGACTCCTGTTCATGAACT+CGG | + | chr8.3:42968697-42968716 | MS.gene25471:CDS | 40.0% | |
| ACTGGATCCTTCAATCTTTC+AGG | - | chr8.3:42969279-42969298 | None:intergenic | 40.0% | |
| ACTTCACACATAAGGGAATC+TGG | + | chr8.3:42969234-42969253 | MS.gene25471:CDS | 40.0% | |
| ACTTGTCATTGTTGAATGCC+AGG | - | chr8.3:42969356-42969375 | None:intergenic | 40.0% | |
| AGGAACTGTAGTTGCACAAA+AGG | + | chr8.3:42970226-42970245 | MS.gene25471:CDS | 40.0% | |
| AGGTGATGACTTCACACATA+AGG | + | chr8.3:42969226-42969245 | MS.gene25471:CDS | 40.0% | |
| ATAAACAGCATCTGGCAAAG+AGG | + | chr8.3:42969577-42969596 | MS.gene25471:CDS | 40.0% | |
| ATTGTCGTGGCAAACTAACA+TGG | + | chr8.3:42969911-42969930 | MS.gene25471:CDS | 40.0% | |
| CAAAGTGCAGATATTTCCAC+CGG | - | chr8.3:42969846-42969865 | None:intergenic | 40.0% | |
| CATAAGGACACACATTTGGT+AGG | - | chr8.3:42969997-42970016 | None:intergenic | 40.0% | |
| GATGAGTAAAGATGTTGGTG+AGG | + | chr8.3:42970148-42970167 | MS.gene25471:CDS | 40.0% | |
| GCAGACTTAAAAGCAACCTT+TGG | + | chr8.3:42969939-42969958 | MS.gene25471:CDS | 40.0% | |
| GGATAGAGTTAGCCATTACA+TGG | + | chr8.3:42969017-42969036 | MS.gene25471:CDS | 40.0% | |
| GGGAAGAAATGTCCTTAGAA+AGG | + | chr8.3:42970121-42970140 | MS.gene25471:CDS | 40.0% | |
| GGTGATGACTTCACACATAA+GGG | + | chr8.3:42969227-42969246 | MS.gene25471:CDS | 40.0% | |
| TACAGACATGAAAACCTCTC+AGG | + | chr8.3:42969704-42969723 | MS.gene25471:CDS | 40.0% | |
| TATTACCTTGGCACACATAC+TGG | + | chr8.3:42969882-42969901 | MS.gene25471:CDS | 40.0% | |
| TGATAGGTTGTACTCAGGAT+TGG | + | chr8.3:42968504-42968523 | MS.gene25471:CDS | 40.0% | |
| TGGAAGAACTGAACAGGAAA+TGG | + | chr8.3:42968596-42968615 | MS.gene25471:CDS | 40.0% | |
| TTAGTACATAGTGAACGCAC+TGG | + | chr8.3:42968793-42968812 | MS.gene25471:CDS | 40.0% | |
| TTGTCGTGGCAAACTAACAT+GGG | + | chr8.3:42969912-42969931 | MS.gene25471:CDS | 40.0% | |
| TTTCCTTGCAAATCCAACAG+AGG | + | chr8.3:42970400-42970419 | MS.gene25471:CDS | 40.0% | |
| ! | ACGAGGAATTCAAAGCATTC+TGG | - | chr8.3:42969383-42969402 | None:intergenic | 40.0% |
| ! | AGTTTCCTGTTTCTCAGGTT+CGG | - | chr8.3:42970255-42970274 | None:intergenic | 40.0% |
| ! | CTTAAAAGCAACCTTTGGGA+AGG | + | chr8.3:42969944-42969963 | MS.gene25471:CDS | 40.0% |
| ! | GAGGCTTTTGTCTGGAAAAA+CGG | + | chr8.3:42969596-42969615 | MS.gene25471:CDS | 40.0% |
| ! | GTGAAATGAACTCTGGAGAA+CGG | - | chr8.3:42969431-42969450 | None:intergenic | 40.0% |
| ! | TCTCATTGAGCGAGACTTTT+TGG | + | chr8.3:42970442-42970461 | MS.gene25471:CDS | 40.0% |
| ! | TGAAATGAACTCTGGAGAAC+GGG | - | chr8.3:42969430-42969449 | None:intergenic | 40.0% |
| ! | TTTGGTGATAGGTTGTACTC+AGG | + | chr8.3:42968499-42968518 | MS.gene25471:CDS | 40.0% |
| !! | CGGTCTTTTGAAAATACGAG+AGG | + | chr8.3:42969206-42969225 | MS.gene25471:CDS | 40.0% |
| !! | CTTTTCTGGAAGAACTGAAC+AGG | + | chr8.3:42968590-42968609 | MS.gene25471:CDS | 40.0% |
| AAGACCCTGTTGTAAGAACC+TGG | - | chr8.3:42969791-42969810 | None:intergenic | 45.0% | |
| ACTGTCCAGGTTCTTACAAC+AGG | + | chr8.3:42969783-42969802 | MS.gene25471:CDS | 45.0% | |
| ACTTCGTAAGGGTCTGAAAG+GGG | + | chr8.3:42969467-42969486 | MS.gene25471:CDS | 45.0% | |
| AGACTCCTGTTCATGAACTC+GGG | + | chr8.3:42968698-42968717 | MS.gene25471:CDS | 45.0% | |
| AGGTTCTTACAACAGGGTCT+TGG | + | chr8.3:42969790-42969809 | MS.gene25471:CDS | 45.0% | |
| ATCCAGTTGAGTTTGTGCAG+AGG | + | chr8.3:42969292-42969311 | MS.gene25471:CDS | 45.0% | |
| ATGCGTTTCTTGACCTCTGT+TGG | - | chr8.3:42970416-42970435 | None:intergenic | 45.0% | |
| ATTCCAACCAGATCAGGACT+CGG | + | chr8.3:42968749-42968768 | MS.gene25471:CDS | 45.0% | |
| CACGTAATACTCGACTGAGT+TGG | - | chr8.3:42969816-42969835 | None:intergenic | 45.0% | |
| CTGCACTTTGCGAGAAGTTT+CGG | + | chr8.3:42969856-42969875 | MS.gene25471:CDS | 45.0% | |
| CTGTCCAGGTTCTTACAACA+GGG | + | chr8.3:42969784-42969803 | MS.gene25471:CDS | 45.0% | |
| GAGCCGATGAGTAAAGATGT+TGG | + | chr8.3:42970143-42970162 | MS.gene25471:CDS | 45.0% | |
| GGATGATGTAGAGGTTACTC+TGG | + | chr8.3:42969497-42969516 | MS.gene25471:CDS | 45.0% | |
| GTTAAGCTCAAGACCGAATG+TGG | + | chr8.3:42969648-42969667 | MS.gene25471:CDS | 45.0% | |
| TCTATTGAAGCAGCTCAAGG+AGG | + | chr8.3:42968565-42968584 | MS.gene25471:CDS | 45.0% | |
| TGACCTCTGTTGGATTTGCA+AGG | - | chr8.3:42970406-42970425 | None:intergenic | 45.0% | |
| TGTAGAGGTTACTCTGGACA+AGG | + | chr8.3:42969503-42969522 | MS.gene25471:CDS | 45.0% | |
| ! | AAATGAACTCTGGAGAACGG+GGG | - | chr8.3:42969428-42969447 | None:intergenic | 45.0% |
| ! | AGCTCAAGGAGGATCTTTTC+TGG | + | chr8.3:42968576-42968595 | MS.gene25471:CDS | 45.0% |
| ! | GAAATGAACTCTGGAGAACG+GGG | - | chr8.3:42969429-42969448 | None:intergenic | 45.0% |
| !! | ACAGGAGTCTTTTTGGCACT+TGG | - | chr8.3:42968688-42968707 | None:intergenic | 45.0% |
| !! | TACTCATCGGCTCCTTTCTA+AGG | - | chr8.3:42970136-42970155 | None:intergenic | 45.0% |
| !! | TGAGCGAGACTTTTTGGAGA+GGG | + | chr8.3:42970448-42970467 | MS.gene25471:CDS | 45.0% |
| !! | TTGAGCGAGACTTTTTGGAG+AGG | + | chr8.3:42970447-42970466 | MS.gene25471:CDS | 45.0% |
| AACCTCTCAGGACACAATGC+AGG | + | chr8.3:42969716-42969735 | MS.gene25471:CDS | 50.0% | |
| ACCTCTCAGGACACAATGCA+GGG | + | chr8.3:42969717-42969736 | MS.gene25471:CDS | 50.0% | |
| AGAACCTGGACAGTAAGCGT+AGG | - | chr8.3:42969777-42969796 | None:intergenic | 50.0% | |
| AGCAACTGAGATTCCTGCTC+CGG | + | chr8.3:42970061-42970080 | MS.gene25471:CDS | 50.0% | |
| AGCCTCTGCACAAACTCAAC+TGG | - | chr8.3:42969297-42969316 | None:intergenic | 50.0% | |
| ATACTGGCAGGAGATTGTCG+TGG | + | chr8.3:42969898-42969917 | MS.gene25471:CDS | 50.0% | |
| ATGAACTCGGGCTGAATCTG+TGG | + | chr8.3:42968710-42968729 | MS.gene25471:CDS | 50.0% | |
| ATGCTTCTGACCCTTCCCAA+AGG | - | chr8.3:42969958-42969977 | None:intergenic | 50.0% | |
| CAGTCTCGGGATCCATGTAA+TGG | - | chr8.3:42969032-42969051 | None:intergenic | 50.0% | |
| CATCTCTTAAGATCCGGAGC+AGG | - | chr8.3:42970077-42970096 | None:intergenic | 50.0% | |
| GAGTATTACGTGCAACCTGC+CGG | + | chr8.3:42969824-42969843 | MS.gene25471:CDS | 50.0% | |
| GGAATCCGAACCTGAGAAAC+AGG | + | chr8.3:42970247-42970266 | MS.gene25471:CDS | 50.0% | |
| GGTCAACGAGGATGATGTAG+AGG | + | chr8.3:42969488-42969507 | MS.gene25471:CDS | 50.0% | |
| TCGGCTACTGAACACACTTC+TGG | + | chr8.3:42968768-42968787 | MS.gene25471:CDS | 50.0% | |
| TTCAGCCCGAGTTCATGAAC+AGG | - | chr8.3:42968706-42968725 | None:intergenic | 50.0% | |
| TTGTTCCGTCGTGTAACCGA+CGG | + | chr8.3:42969186-42969205 | MS.gene25471:CDS | 50.0% | |
| ! | AAAGACCGTCGGTTACACGA+CGG | - | chr8.3:42969194-42969213 | None:intergenic | 50.0% |
| ! | CTGGCAAAGAGGCTTTTGTC+TGG | + | chr8.3:42969588-42969607 | MS.gene25471:CDS | 50.0% |
| ! | GAGGCGTCTGAATGAGGAAA+TGG | + | chr8.3:42968996-42969015 | MS.gene25471:CDS | 50.0% |
| ! | TGCCGAGTTTCCTGTTTCTC+AGG | - | chr8.3:42970260-42970279 | None:intergenic | 50.0% |
| ACCTTGGCACACATACTGGC+AGG | + | chr8.3:42969886-42969905 | MS.gene25471:CDS | 55.0% | |
| ACTATCGCCGCCTCAATCTG+AGG | - | chr8.3:42970305-42970324 | None:intergenic | 55.0% | |
| AGATTGAGGCGGCGATAGTG+AGG | + | chr8.3:42970306-42970325 | MS.gene25471:CDS | 55.0% | |
| CAGGAAGCCTCAGATTGAGG+CGG | + | chr8.3:42970295-42970314 | MS.gene25471:CDS | 55.0% | |
| GGACAGGAAGCCTCAGATTG+AGG | + | chr8.3:42970292-42970311 | MS.gene25471:CDS | 55.0% | |
| GTGCAGATATTTCCACCGGC+AGG | - | chr8.3:42969842-42969861 | None:intergenic | 55.0% | |
| TAGCCGAGTCCTGATCTGGT+TGG | - | chr8.3:42968755-42968774 | None:intergenic | 55.0% | |
| TAGGACCGTCGCCTAAGTCA+GGG | - | chr8.3:42969758-42969777 | None:intergenic | 55.0% | |
| TATGCCAGCCACCCTGACTT+AGG | + | chr8.3:42969744-42969763 | MS.gene25471:CDS | 55.0% | |
| TATTACGTGCAACCTGCCGG+TGG | + | chr8.3:42969827-42969846 | MS.gene25471:CDS | 55.0% | |
| TCAGTAGCCGAGTCCTGATC+TGG | - | chr8.3:42968759-42968778 | None:intergenic | 55.0% | |
| TCCTGCCAGTATGTGTGCCA+AGG | - | chr8.3:42969890-42969909 | None:intergenic | 55.0% | |
| !! | AGCTGAGAGGCGTCTGAATG+AGG | + | chr8.3:42968990-42969009 | MS.gene25471:CDS | 55.0% |
| ACAGGAAACTCGGCAGCGAG+TGG | + | chr8.3:42970265-42970284 | MS.gene25471:CDS | 60.0% | |
| AGCCACCCTGACTTAGGCGA+CGG | + | chr8.3:42969750-42969769 | MS.gene25471:CDS | 60.0% | |
| CGGTCCTACGCTTACTGTCC+AGG | + | chr8.3:42969770-42969789 | MS.gene25471:CDS | 60.0% | |
| GCCCTGCATTGTGTCCTGAG+AGG | - | chr8.3:42969721-42969740 | None:intergenic | 60.0% | |
| GGGTCTGAAAGGGGTCAACG+AGG | + | chr8.3:42969476-42969495 | MS.gene25471:CDS | 60.0% | |
| GTAGGACCGTCGCCTAAGTC+AGG | - | chr8.3:42969759-42969778 | None:intergenic | 60.0% | |
| AACTCGGCAGCGAGTGGAGG+AGG | + | chr8.3:42970271-42970290 | MS.gene25471:CDS | 65.0% | |
| GACCGTCGCCTAAGTCAGGG+TGG | - | chr8.3:42969755-42969774 | None:intergenic | 65.0% | |
| GGAAACTCGGCAGCGAGTGG+AGG | + | chr8.3:42970268-42970287 | MS.gene25471:CDS | 65.0% | |
| GTCGCCTAAGTCAGGGTGGC+TGG | - | chr8.3:42969751-42969770 | None:intergenic | 65.0% | |
| GGCAGCGAGTGGAGGAGGAC+AGG | + | chr8.3:42970276-42970295 | MS.gene25471:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 42968484 | 42970508 | 42968484 | ID=MS.gene25471 |
| chr8.3 | mRNA | 42968484 | 42970508 | 42968484 | ID=MS.gene25471.t1;Parent=MS.gene25471 |
| chr8.3 | exon | 42968484 | 42970508 | 42968484 | ID=MS.gene25471.t1.exon1;Parent=MS.gene25471.t1 |
| chr8.3 | CDS | 42968484 | 42970508 | 42968484 | ID=cds.MS.gene25471.t1;Parent=MS.gene25471.t1 |
| Gene Sequence |
| Protein sequence |
