Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96526.t1 | XP_003614503.2 | 99 | 486 | 5 | 0 | 1 | 486 | 6 | 491 | 3.30E-271 | 943.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96526.t1 | Q869R1 | 25.9 | 441 | 297 | 10 | 32 | 461 | 134 | 555 | 6.3e-29 | 130.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96526.t1 | G7JYE2 | 99.0 | 486 | 5 | 0 | 1 | 486 | 6 | 491 | 2.4e-271 | 943.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049808 | MS.gene96526 | 0.810976 | 8.82E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene96526 | 0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene96526 | 0.840051 | 1.10E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene96526 | 0.839296 | 1.72E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene96526 | 0.808069 | 3.71E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene96526 | 0.830422 | 2.96E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene96526 | 0.834839 | 2.38E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene96526 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene053894 | MS.gene96526 | 0.921301 | 4.26E-88 | -1.69E-46 |
| MS.gene055512 | MS.gene96526 | 0.830249 | 3.27E-55 | -1.69E-46 |
| MS.gene057287 | MS.gene96526 | 0.80961 | 1.74E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene96526 | 0.819113 | 1.38E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene96526 | 0.804798 | 1.82E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96526.t1 | MTR_5g054780 | 98.971 | 486 | 5 | 0 | 1 | 486 | 6 | 491 | 0.0 | 988 |
| MS.gene96526.t1 | MTR_1g111330 | 82.937 | 463 | 76 | 1 | 24 | 486 | 35 | 494 | 0.0 | 749 |
| MS.gene96526.t1 | MTR_1g111330 | 82.965 | 317 | 54 | 0 | 24 | 340 | 35 | 351 | 3.21e-179 | 506 |
| MS.gene96526.t1 | MTR_4g108910 | 69.388 | 147 | 29 | 2 | 340 | 486 | 2 | 132 | 6.45e-61 | 196 |
| MS.gene96526.t1 | MTR_3g033520 | 28.247 | 308 | 183 | 7 | 145 | 440 | 261 | 542 | 1.73e-29 | 122 |
| MS.gene96526.t1 | MTR_3g033520 | 28.247 | 308 | 183 | 7 | 145 | 440 | 242 | 523 | 1.90e-29 | 122 |
| MS.gene96526.t1 | MTR_7g086710 | 25.330 | 454 | 296 | 11 | 20 | 466 | 32 | 449 | 2.66e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96526.t1 | AT1G25500 | 74.153 | 472 | 118 | 2 | 4 | 474 | 18 | 486 | 0.0 | 679 |
| MS.gene96526.t1 | AT1G25500 | 78.398 | 412 | 88 | 1 | 64 | 474 | 17 | 428 | 0.0 | 625 |
| MS.gene96526.t1 | AT1G25500 | 80.858 | 303 | 57 | 1 | 116 | 417 | 1 | 303 | 7.82e-171 | 483 |
| MS.gene96526.t1 | AT5G13760 | 24.605 | 443 | 299 | 9 | 9 | 440 | 115 | 533 | 2.09e-30 | 124 |
| MS.gene96526.t1 | AT3G04440 | 25.622 | 402 | 274 | 10 | 87 | 480 | 94 | 478 | 2.61e-19 | 90.9 |
| MS.gene96526.t1 | AT3G04440 | 25.622 | 402 | 274 | 10 | 87 | 480 | 71 | 455 | 2.81e-19 | 90.9 |
| MS.gene96526.t1 | AT3G03700 | 25.622 | 402 | 274 | 10 | 87 | 480 | 94 | 478 | 2.88e-19 | 90.9 |
Find 115 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTCTGTAAGCTTATTT+TGG | 0.132127 | 5.1:+42929582 | MS.gene96526:CDS |
| CCCTTGAAGATTGGTGTTTA+TGG | 0.163569 | 5.1:+42930157 | MS.gene96526:intron |
| GAGAGTCGCATATGCGTTTA+TGG | 0.163908 | 5.1:+42929338 | MS.gene96526:CDS |
| TTATGGCTGTCATGCTCTTA+TGG | 0.229988 | 5.1:+42929355 | MS.gene96526:CDS |
| TGCAGAACCAACATTGTAAA+TGG | 0.266173 | 5.1:-42929276 | None:intergenic |
| AGTTATCAGCCCACCTAAAA+TGG | 0.267123 | 5.1:-42930287 | None:intergenic |
| TTGTGATTCTTGGCGTTAAC+AGG | 0.271164 | 5.1:+42927395 | MS.gene96526:CDS |
| CTGGAACTTGCTCTGGTGTT+TGG | 0.293203 | 5.1:+42930308 | MS.gene96526:CDS |
| GGCGTTGGCACGATGTATTC+TGG | 0.294547 | 5.1:+42927329 | MS.gene96526:CDS |
| CTGGTTTGACAGAGGATTAC+TGG | 0.297174 | 5.1:+42927479 | MS.gene96526:CDS |
| TCCCATCTCTGAATCAATAA+TGG | 0.300289 | 5.1:-42930892 | None:intergenic |
| CATTATTCACAGCTGCTATT+AGG | 0.318508 | 5.1:+42929768 | MS.gene96526:CDS |
| TGGAACTTGCTCTGGTGTTT+GGG | 0.323340 | 5.1:+42930309 | MS.gene96526:CDS |
| TTTGATTCGTTTCAGATAAG+AGG | 0.327931 | 5.1:+42929888 | MS.gene96526:intron |
| CAAGATAAGTGGTAAGAATA+TGG | 0.340491 | 5.1:-42927600 | None:intergenic |
| TATGCTCATGGGCATGATAT+TGG | 0.343150 | 5.1:+42930378 | MS.gene96526:CDS |
| TATGCTGTCGCTGGCGGCGT+TGG | 0.349719 | 5.1:+42927508 | MS.gene96526:CDS |
| ATGCTGTCGCTGGCGGCGTT+GGG | 0.354756 | 5.1:+42927509 | MS.gene96526:CDS |
| TGGATGGCATTGTGGTCATT+TGG | 0.361862 | 5.1:+42929375 | MS.gene96526:CDS |
| TTCCGCATAACAGATATATA+TGG | 0.362458 | 5.1:-42930866 | None:intergenic |
| TATGCTTTAACAACATCTTT+TGG | 0.373372 | 5.1:+42929728 | MS.gene96526:CDS |
| GGCGGCGTTGGGACTGCTCT+TGG | 0.380288 | 5.1:+42927520 | MS.gene96526:CDS |
| TACAATGTTGGTTCTGCAAA+AGG | 0.380351 | 5.1:+42929281 | MS.gene96526:CDS |
| GGTGCAATGTTTCGGAAATC+TGG | 0.390267 | 5.1:-42930930 | None:intergenic |
| ATGGAGTTGGTTGTTGCTGT+TGG | 0.393555 | 5.1:+42927543 | MS.gene96526:CDS |
| ACAGTACATGTCATAGTGTC+TGG | 0.405736 | 5.1:+42929626 | MS.gene96526:CDS |
| AAGTCGCTGGTGCAATGTTT+CGG | 0.405815 | 5.1:-42930938 | None:intergenic |
| TTCAGGTGCTGTGCTGTTGA+TGG | 0.407659 | 5.1:+42930261 | MS.gene96526:CDS |
| CAAAACCCACGCCAATCAAC+TGG | 0.407766 | 5.1:-42927369 | None:intergenic |
| TTGTGGTCATTTGGAGCTGC+TGG | 0.409399 | 5.1:+42929384 | MS.gene96526:CDS |
| CTTGCTCTGGTGTTTGGGCA+TGG | 0.410854 | 5.1:+42930314 | MS.gene96526:CDS |
| TTGCGAGGCTGCATCAGTTC+CGG | 0.412997 | 5.1:+42929679 | MS.gene96526:CDS |
| CTATTTGTGATCCAGTTGAT+TGG | 0.417906 | 5.1:+42927358 | MS.gene96526:CDS |
| TAAGTACACGTACCGGTTCA+TGG | 0.432396 | 5.1:+42927447 | MS.gene96526:CDS |
| CCCATCTCTGAATCAATAAT+GGG | 0.437239 | 5.1:-42930891 | None:intergenic |
| CTGATAACTGGAACTTGCTC+TGG | 0.440852 | 5.1:+42930301 | MS.gene96526:CDS |
| GGACTGCTCTTGGATGGAGT+TGG | 0.442052 | 5.1:+42927530 | MS.gene96526:CDS |
| TACCTGATTGTTGGTGGCAG+TGG | 0.442191 | 5.1:-42926368 | None:intergenic |
| ACCGTTCTGCTAGAGATGCC+TGG | 0.442652 | 5.1:+42930191 | MS.gene96526:CDS |
| TGGAGTTGGTTGTTGCTGTT+GGG | 0.445429 | 5.1:+42927544 | MS.gene96526:CDS |
| TGGGAGTTATTTCAATCAAC+GGG | 0.445833 | 5.1:+42930211 | MS.gene96526:CDS |
| AGAGGAATCCGGTCAAAGAT+AGG | 0.447023 | 5.1:+42929906 | MS.gene96526:CDS |
| CAGACTTCCATTTACAATGT+TGG | 0.448036 | 5.1:+42929269 | MS.gene96526:intron |
| ATACTGTAAAGATTTCATTA+TGG | 0.449302 | 5.1:-42929708 | None:intergenic |
| ATCTTGTGGAGACTCTTGTC+AGG | 0.452670 | 5.1:+42929970 | MS.gene96526:CDS |
| CATTCTTGCCTATCTTTGAC+CGG | 0.452929 | 5.1:-42929914 | None:intergenic |
| GGACAGACACCTTCATCATC+TGG | 0.455412 | 5.1:-42927579 | None:intergenic |
| GGTTGGAGCGGCAATGGTTG+TGG | 0.459158 | 5.1:+42930825 | MS.gene96526:intron |
| GTGTTTGGGCATGGATGAAA+TGG | 0.463121 | 5.1:+42930323 | MS.gene96526:CDS |
| CTTGTGGCGTATGATTGTTC+AGG | 0.468254 | 5.1:+42930244 | MS.gene96526:CDS |
| GCGTTGGGACTGCTCTTGGA+TGG | 0.476999 | 5.1:+42927524 | MS.gene96526:CDS |
| CGTTTCAGATAAGAGGAATC+CGG | 0.479860 | 5.1:+42929895 | MS.gene96526:intron |
| CCCATTATTGATTCAGAGAT+GGG | 0.480499 | 5.1:+42930891 | MS.gene96526:CDS |
| TTCCACTGCCACCAACAATC+AGG | 0.481194 | 5.1:+42926366 | MS.gene96526:CDS |
| ATATTATATCTGTCATAGAT+AGG | 0.482146 | 5.1:+42927707 | MS.gene96526:CDS |
| CTGATTCGTGTTAGTATCCA+TGG | 0.482289 | 5.1:+42929653 | MS.gene96526:CDS |
| GATTTCATTATGGAGTTAGC+CGG | 0.484194 | 5.1:-42929698 | None:intergenic |
| AGCTCCTATGTTGAAGTCGC+TGG | 0.491841 | 5.1:-42930951 | None:intergenic |
| TGCTATTAGGACACTGCGAT+GGG | 0.492171 | 5.1:+42929781 | MS.gene96526:CDS |
| TGGATCTACATCTATGCTCA+TGG | 0.499343 | 5.1:+42930366 | MS.gene96526:CDS |
| AACATAGGAGCTCGCGTGCA+AGG | 0.501996 | 5.1:+42930962 | MS.gene96526:CDS |
| ACCCATTATTGATTCAGAGA+TGG | 0.503313 | 5.1:+42930890 | MS.gene96526:CDS |
| CAGCCTCATTCTCCATGAAC+CGG | 0.504266 | 5.1:-42927459 | None:intergenic |
| TGGCCACTCTATGCTGTCGC+TGG | 0.505383 | 5.1:+42927499 | MS.gene96526:CDS |
| TCAGGTGCTGTGCTGTTGAT+GGG | 0.509873 | 5.1:+42930262 | MS.gene96526:CDS |
| GGCTGTCATGCTCTTATGGA+TGG | 0.510990 | 5.1:+42929359 | MS.gene96526:CDS |
| GAGTCTCCACAAGATGGAAA+AGG | 0.511964 | 5.1:-42929962 | None:intergenic |
| CGGTTCATGGAGAATGAGGC+TGG | 0.519033 | 5.1:+42927460 | MS.gene96526:CDS |
| GCATGGGCGACGGCGGACGC+TGG | 0.520916 | 5.1:+42929421 | MS.gene96526:CDS |
| TCTGCAAAAGGCTGTTAAGA+TGG | 0.525636 | 5.1:+42929293 | MS.gene96526:CDS |
| CCGTTCTGCTAGAGATGCCT+GGG | 0.526826 | 5.1:+42930192 | MS.gene96526:CDS |
| CATCAGTGAAGTGGTGAACA+TGG | 0.529486 | 5.1:+42927297 | MS.gene96526:CDS |
| AAAAGGCTGTTAAGATGGTA+TGG | 0.531876 | 5.1:+42929298 | MS.gene96526:CDS |
| TATGCGACTCTCATAACCTC+TGG | 0.532254 | 5.1:-42929327 | None:intergenic |
| CTGGGAGTTATTTCAATCAA+CGG | 0.546389 | 5.1:+42930210 | MS.gene96526:CDS |
| TAACAAGTATGCTTATGTCC+AGG | 0.548708 | 5.1:+42929998 | MS.gene96526:CDS |
| CTGCTATTAGGACACTGCGA+TGG | 0.551628 | 5.1:+42929780 | MS.gene96526:CDS |
| ACTGATCACAGCAAGATAAG+TGG | 0.552209 | 5.1:-42927611 | None:intergenic |
| TGGGCGACGGCGGACGCTGG+TGG | 0.554770 | 5.1:+42929424 | MS.gene96526:CDS |
| TGCTCTTATGGATGGCATTG+TGG | 0.555214 | 5.1:+42929367 | MS.gene96526:CDS |
| TGCACCAGCGACTTCAACAT+AGG | 0.555754 | 5.1:+42930947 | MS.gene96526:CDS |
| TTGAAGTACCTGATTGTTGG+TGG | 0.559667 | 5.1:-42926374 | None:intergenic |
| TGACAAGAGTCTCCACAAGA+TGG | 0.562607 | 5.1:-42929968 | None:intergenic |
| TACGAGAATCAAGGTGATCG+TGG | 0.569177 | 5.1:-42930996 | None:intergenic |
| GTGATCCAGTTGATTGGCGT+GGG | 0.570702 | 5.1:+42927364 | MS.gene96526:CDS |
| GCGCGCAATCCAGATGATGA+AGG | 0.572957 | 5.1:+42927570 | MS.gene96526:CDS |
| AACGGGAGTTGAAGCACTTG+TGG | 0.573101 | 5.1:+42930228 | MS.gene96526:CDS |
| CAGTACATGTCATAGTGTCT+GGG | 0.574385 | 5.1:+42929627 | MS.gene96526:CDS |
| GGATCTACATCTATGCTCAT+GGG | 0.586213 | 5.1:+42930367 | MS.gene96526:CDS |
| ACATAGGAGCTCGCGTGCAA+GGG | 0.586817 | 5.1:+42930963 | MS.gene96526:CDS |
| CGGACGCTGGTGGCTTCTTG+TGG | 0.590851 | 5.1:+42929434 | MS.gene96526:CDS |
| GTAGCTTCAAGCATGGGCGA+CGG | 0.591048 | 5.1:+42929411 | MS.gene96526:CDS |
| TGGTGTTGTAGCTTCAAGCA+TGG | 0.591952 | 5.1:+42929404 | MS.gene96526:CDS |
| TGTGATCCAGTTGATTGGCG+TGG | 0.597398 | 5.1:+42927363 | MS.gene96526:CDS |
| GTACCGGTTCATGGAGAATG+AGG | 0.606474 | 5.1:+42927456 | MS.gene96526:CDS |
| CCACTCTATGCTGTCGCTGG+CGG | 0.608339 | 5.1:+42927502 | MS.gene96526:CDS |
| TGGAGCGGCAATGGTTGTGG+TGG | 0.610073 | 5.1:+42930828 | MS.gene96526:CDS |
| TTTCTGGTATACGAGAATCA+AGG | 0.610752 | 5.1:-42931005 | None:intergenic |
| ATCCATATATATCTGTTATG+CGG | 0.615901 | 5.1:+42930864 | MS.gene96526:CDS |
| GGTGTTGTAGCTTCAAGCAT+GGG | 0.620790 | 5.1:+42929405 | MS.gene96526:CDS |
| ACATTGATAAGTACACGTAC+CGG | 0.624419 | 5.1:+42927440 | MS.gene96526:CDS |
| CGTTGATTGAAATAACTCCC+AGG | 0.625002 | 5.1:-42930209 | None:intergenic |
| ATGCAGCCTCGCAACCACCA+TGG | 0.625809 | 5.1:-42929670 | None:intergenic |
| CAACAACAACATCAGTGAAG+TGG | 0.626519 | 5.1:+42927288 | MS.gene96526:CDS |
| ACGAGAATCAAGGTGATCGT+GGG | 0.626896 | 5.1:-42930995 | None:intergenic |
| GCTTCAAGCATGGGCGACGG+CGG | 0.627340 | 5.1:+42929414 | MS.gene96526:CDS |
| CCCAGGCATCTCTAGCAGAA+CGG | 0.629817 | 5.1:-42930192 | None:intergenic |
| GAATGAGGCTGGTTTGACAG+AGG | 0.635745 | 5.1:+42927471 | MS.gene96526:CDS |
| CCGCCAGCGACAGCATAGAG+TGG | 0.636241 | 5.1:-42927502 | None:intergenic |
| TATTAGGACACTGCGATGGG+AGG | 0.654899 | 5.1:+42929784 | MS.gene96526:CDS |
| TAGTATCCATGGTGGTTGCG+AGG | 0.664174 | 5.1:+42929664 | MS.gene96526:CDS |
| GATGGTATGGAATCTTCCAG+AGG | 0.689240 | 5.1:+42929311 | MS.gene96526:CDS |
| TGTTAACGCCAAGAATCACA+AGG | 0.715028 | 5.1:-42927393 | None:intergenic |
| TCCAAAATAAGCTTACAGAG+AGG | 0.747140 | 5.1:-42929583 | None:intergenic |
| ATTCGTGTTAGTATCCATGG+TGG | 0.768648 | 5.1:+42929656 | MS.gene96526:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATAAAAAAAAATTGT+GGG | - | chr5.1:42926410-42926429 | None:intergenic | 10.0% |
| !! | TTTAAGTAAATAAATTAAAC+AGG | - | chr5.1:42928327-42928346 | None:intergenic | 10.0% |
| !!! | TTTGCTTTATATAATTATTT+TGG | + | chr5.1:42929203-42929222 | MS.gene96526:intron | 10.0% |
| !! | AATAAATCAATTCATGTATT+GGG | - | chr5.1:42928487-42928506 | None:intergenic | 15.0% |
| !! | AATATGAAATGACATAAAAA+CGG | - | chr5.1:42927103-42927122 | None:intergenic | 15.0% |
| !! | AATTATATAAAGCAAATAGA+AGG | - | chr5.1:42929199-42929218 | None:intergenic | 15.0% |
| !! | ATTATATAAAGCAAATAGAA+GGG | - | chr5.1:42929198-42929217 | None:intergenic | 15.0% |
| !! | ATTATTCTACAATACATATT+TGG | + | chr5.1:42928896-42928915 | MS.gene96526:intron | 15.0% |
| !! | GAAAAGATAAAAAAAAATTG+TGG | - | chr5.1:42926411-42926430 | None:intergenic | 15.0% |
| !! | TAAAAAAATGTTAAGCTATA+AGG | - | chr5.1:42927025-42927044 | None:intergenic | 15.0% |
| !! | TAAATATTTAATCTAATGAG+AGG | + | chr5.1:42928246-42928265 | MS.gene96526:intron | 15.0% |
| !! | TAATAAATCAATTCATGTAT+TGG | - | chr5.1:42928488-42928507 | None:intergenic | 15.0% |
| !! | TAATTGAATTATTGTATGTT+TGG | - | chr5.1:42927002-42927021 | None:intergenic | 15.0% |
| !! | TCAAAAGTAATAAAAAATCA+AGG | - | chr5.1:42930418-42930437 | None:intergenic | 15.0% |
| !! | TCAAATAAATCAATTCAAAT+AGG | + | chr5.1:42928088-42928107 | MS.gene96526:intron | 15.0% |
| !!! | AAAAAAAATAGAATCCATTT+TGG | + | chr5.1:42926903-42926922 | MS.gene96526:intron | 15.0% |
| !!! | AACATTTCTAAAATCAATTT+TGG | + | chr5.1:42926959-42926978 | MS.gene96526:intron | 15.0% |
| !!! | AATAGAAATCGTTTAATTTT+TGG | + | chr5.1:42928821-42928840 | MS.gene96526:intron | 15.0% |
| !!! | ATAAAAATCATTGATTATGA+AGG | + | chr5.1:42926741-42926760 | MS.gene96526:intron | 15.0% |
| !!! | GGATTCTATTTTTTTTTTTT+TGG | - | chr5.1:42926899-42926918 | None:intergenic | 15.0% |
| !!! | TATGTATTGTAGAATAATTT+TGG | - | chr5.1:42928894-42928913 | None:intergenic | 15.0% |
| !!! | TTCATTTTTTTTCTTTCTAT+TGG | + | chr5.1:42926484-42926503 | MS.gene96526:intron | 15.0% |
| !! | AAAGTAATAAAAAATCAAGG+AGG | - | chr5.1:42930415-42930434 | None:intergenic | 20.0% |
| !! | AAATTAAACAGGTTAAATCA+AGG | - | chr5.1:42928316-42928335 | None:intergenic | 20.0% |
| !! | ATACTGTAAAGATTTCATTA+TGG | - | chr5.1:42929711-42929730 | None:intergenic | 20.0% |
| !! | ATATTATATCTGTCATAGAT+AGG | + | chr5.1:42927707-42927726 | MS.gene96526:CDS | 20.0% |
| !! | CAATTACCTAGATATAAATT+AGG | + | chr5.1:42928606-42928625 | MS.gene96526:intron | 20.0% |
| !! | CTTCTCTAAATTTAGATATT+AGG | - | chr5.1:42930627-42930646 | None:intergenic | 20.0% |
| !! | TTCCAAGTAAAATAGTAAAA+TGG | - | chr5.1:42927051-42927070 | None:intergenic | 20.0% |
| !!! | AATAACTTTAGGTTTAGTTT+GGG | + | chr5.1:42928689-42928708 | MS.gene96526:intron | 20.0% |
| !!! | ATTGATGTTATTTTAAGCAT+TGG | + | chr5.1:42927798-42927817 | MS.gene96526:intron | 20.0% |
| !!! | CCTAACAATATAGATATTTT+GGG | + | chr5.1:42930439-42930458 | MS.gene96526:intron | 20.0% |
| !!! | CTAACAATATAGATATTTTG+GGG | + | chr5.1:42930440-42930459 | MS.gene96526:intron | 20.0% |
| !!! | TAATAACTTTAGGTTTAGTT+TGG | + | chr5.1:42928688-42928707 | MS.gene96526:intron | 20.0% |
| !!! | TATTGTAGAATAATTTTGGA+GGG | - | chr5.1:42928890-42928909 | None:intergenic | 20.0% |
| !!! | TCCTAACAATATAGATATTT+TGG | + | chr5.1:42930438-42930457 | MS.gene96526:intron | 20.0% |
| !!! | TGATTTTTATTCAGTTTTTG+TGG | - | chr5.1:42926711-42926730 | None:intergenic | 20.0% |
| !!! | TTTTAAATGAAACTTCTTAC+AGG | - | chr5.1:42928649-42928668 | None:intergenic | 20.0% |
| ! | AAAATATCACAGTTTGTCTA+TGG | + | chr5.1:42928665-42928684 | MS.gene96526:intron | 25.0% |
| ! | AATTTCATGTTCACACAAAA+GGG | - | chr5.1:42928170-42928189 | None:intergenic | 25.0% |
| ! | AGAAAACAACATCAAATCAA+AGG | - | chr5.1:42927770-42927789 | None:intergenic | 25.0% |
| ! | ATCCATATATATCTGTTATG+CGG | + | chr5.1:42930864-42930883 | MS.gene96526:CDS | 25.0% |
| ! | ATGTTGCGAATATTCTTAAA+AGG | - | chr5.1:42929079-42929098 | None:intergenic | 25.0% |
| ! | ATTACGTTGTTAATACAAAC+AGG | - | chr5.1:42927863-42927882 | None:intergenic | 25.0% |
| ! | ATTTAATCTAATGAGAGGTA+GGG | + | chr5.1:42928251-42928270 | MS.gene96526:intron | 25.0% |
| ! | CATAAAATGTAGTCTAAGAA+AGG | - | chr5.1:42927744-42927763 | None:intergenic | 25.0% |
| ! | CCCAAAATATCTATATTGTT+AGG | - | chr5.1:42930442-42930461 | None:intergenic | 25.0% |
| ! | GAAATTGAAAGGATTGTATT+AGG | - | chr5.1:42928435-42928454 | None:intergenic | 25.0% |
| ! | GATATAACGCATACTTAATA+TGG | - | chr5.1:42930728-42930747 | None:intergenic | 25.0% |
| ! | TAAGCTAATAAGTGTATGAT+TGG | + | chr5.1:42926677-42926696 | MS.gene96526:intron | 25.0% |
| ! | TATTTAATCTAATGAGAGGT+AGG | + | chr5.1:42928250-42928269 | MS.gene96526:intron | 25.0% |
| ! | TTGTCTATGGTAATAACTTT+AGG | + | chr5.1:42928678-42928697 | MS.gene96526:intron | 25.0% |
| !! | AAAAATAGAATCCATTTTGG+AGG | + | chr5.1:42926906-42926925 | MS.gene96526:intron | 25.0% |
| !! | AGTTGAATTTTTATAATGCG+TGG | + | chr5.1:42928558-42928577 | MS.gene96526:intron | 25.0% |
| !! | ATAACTTGTGAAAGATCATA+AGG | + | chr5.1:42927983-42928002 | MS.gene96526:intron | 25.0% |
| !! | CATGGATACTTTCATTTTAT+TGG | + | chr5.1:42929096-42929115 | MS.gene96526:intron | 25.0% |
| !! | CTCCATTTTACTATTTTACT+TGG | + | chr5.1:42927046-42927065 | MS.gene96526:intron | 25.0% |
| !! | GTAAAACATTTTTACGTTGT+AGG | + | chr5.1:42930547-42930566 | MS.gene96526:intron | 25.0% |
| !! | GTATTGTAGAATAATTTTGG+AGG | - | chr5.1:42928891-42928910 | None:intergenic | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | + | chr5.1:42929728-42929747 | MS.gene96526:CDS | 25.0% |
| !! | TTGAACTTGTGTTCTTTTAT+AGG | + | chr5.1:42926514-42926533 | MS.gene96526:intron | 25.0% |
| !! | TTTGGAGTATTATAACAACA+TGG | + | chr5.1:42928839-42928858 | MS.gene96526:intron | 25.0% |
| !!! | ACTTTCATTTTATTGGTGAT+CGG | + | chr5.1:42929103-42929122 | MS.gene96526:intron | 25.0% |
| !!! | ATAATTGATTGTTTTGAAGC+TGG | - | chr5.1:42926873-42926892 | None:intergenic | 25.0% |
| !!! | CAAATTTTAAAGAGCAAGAA+AGG | - | chr5.1:42928129-42928148 | None:intergenic | 25.0% |
| !!! | TAATTGATTGTTTTGAAGCT+GGG | - | chr5.1:42926872-42926891 | None:intergenic | 25.0% |
| !!! | TTTTAAGAATATTCGCAACA+TGG | + | chr5.1:42929078-42929097 | MS.gene96526:intron | 25.0% |
| AAATCTGGTTGAAAAACTCA+TGG | - | chr5.1:42930918-42930937 | None:intergenic | 30.0% | |
| AAGAAAAATAAACTCCCCAA+AGG | + | chr5.1:42928952-42928971 | MS.gene96526:intron | 30.0% | |
| AATACAAAATCCCCCTAATT+TGG | - | chr5.1:42928929-42928948 | None:intergenic | 30.0% | |
| AATTGCTCTATCAAATAAGG+TGG | - | chr5.1:42928772-42928791 | None:intergenic | 30.0% | |
| AGACGTCCTAATTTATATCT+AGG | - | chr5.1:42928615-42928634 | None:intergenic | 30.0% | |
| ATGATATACTCAGATGCTAA+GGG | - | chr5.1:42927226-42927245 | None:intergenic | 30.0% | |
| ATGCTAAGGGGAAAAAATAA+TGG | - | chr5.1:42927213-42927232 | None:intergenic | 30.0% | |
| ATTGAAAGGATTGTATTAGG+AGG | - | chr5.1:42928432-42928451 | None:intergenic | 30.0% | |
| CAAGATAAGTGGTAAGAATA+TGG | - | chr5.1:42927603-42927622 | None:intergenic | 30.0% | |
| CAATTTCATGTTCACACAAA+AGG | - | chr5.1:42928171-42928190 | None:intergenic | 30.0% | |
| CATGAGAAATGAATACGTAA+AGG | - | chr5.1:42929855-42929874 | None:intergenic | 30.0% | |
| GGATATAGAATAGGATAAGT+AGG | - | chr5.1:42928411-42928430 | None:intergenic | 30.0% | |
| GTATTAGGAGGATATAGAAT+AGG | - | chr5.1:42928420-42928439 | None:intergenic | 30.0% | |
| TAGCATCTGAGTATATCATA+TGG | + | chr5.1:42927227-42927246 | MS.gene96526:intron | 30.0% | |
| TATAGAATAGGATAAGTAGG+TGG | - | chr5.1:42928408-42928427 | None:intergenic | 30.0% | |
| TATCAAACGAGCTCAAAATA+TGG | - | chr5.1:42926555-42926574 | None:intergenic | 30.0% | |
| TATGATATACTCAGATGCTA+AGG | - | chr5.1:42927227-42927246 | None:intergenic | 30.0% | |
| TGATGTGTATATGGAATGTT+GGG | - | chr5.1:42930655-42930674 | None:intergenic | 30.0% | |
| TTCCGCATAACAGATATATA+TGG | - | chr5.1:42930869-42930888 | None:intergenic | 30.0% | |
| ! | ATGGATTTTTGACAATATGC+AGG | + | chr5.1:42927246-42927265 | MS.gene96526:intron | 30.0% |
| ! | ATTCTCACTGTAAAGGTTTT+AGG | - | chr5.1:42930504-42930523 | None:intergenic | 30.0% |
| ! | CCTTATTTGATAGAGCAATT+CGG | + | chr5.1:42928772-42928791 | MS.gene96526:intron | 30.0% |
| ! | TTTGATTCGTTTCAGATAAG+AGG | + | chr5.1:42929888-42929907 | MS.gene96526:intron | 30.0% |
| !! | AGATTCTCTCTGAAATTGAA+AGG | - | chr5.1:42928446-42928465 | None:intergenic | 30.0% |
| !! | GTCATTAAGTTGATTTCTGT+TGG | + | chr5.1:42929225-42929244 | MS.gene96526:intron | 30.0% |
| !! | TTTGATTTTTACCCTCTCTA+AGG | + | chr5.1:42926442-42926461 | MS.gene96526:intron | 30.0% |
| !!! | TACATACTTTTGAGACTGTT+TGG | - | chr5.1:42928053-42928072 | None:intergenic | 30.0% |
| AAAACCTCATACCTTAGAGA+GGG | - | chr5.1:42926456-42926475 | None:intergenic | 35.0% | |
| AAAAGGCTGTTAAGATGGTA+TGG | + | chr5.1:42929298-42929317 | MS.gene96526:CDS | 35.0% | |
| AAGCAAATAGAAGGGAATGA+AGG | - | chr5.1:42929190-42929209 | None:intergenic | 35.0% | |
| AATGGATAGCTGATAAGCTA+GGG | - | chr5.1:42927195-42927214 | None:intergenic | 35.0% | |
| AATTCATGTATTGGGAACTC+AGG | - | chr5.1:42928479-42928498 | None:intergenic | 35.0% | |
| ACAGGTTCAAGAAAAAGAAC+AGG | + | chr5.1:42927413-42927432 | MS.gene96526:CDS | 35.0% | |
| ACAGGTTCTCATAACTCTTA+AGG | - | chr5.1:42927845-42927864 | None:intergenic | 35.0% | |
| ACATTGATAAGTACACGTAC+CGG | + | chr5.1:42927440-42927459 | MS.gene96526:CDS | 35.0% | |
| ACCATAAACACCAATCTTCA+AGG | - | chr5.1:42930161-42930180 | None:intergenic | 35.0% | |
| ACCTATTGTAGAAAAGATGG+TGG | + | chr5.1:42930467-42930486 | MS.gene96526:intron | 35.0% | |
| AGCACCTATTGTAGAAAAGA+TGG | + | chr5.1:42930464-42930483 | MS.gene96526:intron | 35.0% | |
| AGGTGGAGCTGTTAAAATAT+TGG | - | chr5.1:42928391-42928410 | None:intergenic | 35.0% | |
| ATCTCTCATTCTCACTGTAA+AGG | - | chr5.1:42930511-42930530 | None:intergenic | 35.0% | |
| ATTCATGTATTGGGAACTCA+GGG | - | chr5.1:42928478-42928497 | None:intergenic | 35.0% | |
| CAAACGTAATGTTCATCTTC+AGG | + | chr5.1:42928355-42928374 | MS.gene96526:intron | 35.0% | |
| CAACATTGTAAATGGAAGTC+TGG | - | chr5.1:42929271-42929290 | None:intergenic | 35.0% | |
| CAAGAAAGGTAATCAATCTC+TGG | - | chr5.1:42928115-42928134 | None:intergenic | 35.0% | |
| CAGACTTCCATTTACAATGT+TGG | + | chr5.1:42929269-42929288 | MS.gene96526:intron | 35.0% | |
| CATTATTCACAGCTGCTATT+AGG | + | chr5.1:42929768-42929787 | MS.gene96526:CDS | 35.0% | |
| CCATAAACACCAATCTTCAA+GGG | - | chr5.1:42930160-42930179 | None:intergenic | 35.0% | |
| CCCATCTCTGAATCAATAAT+GGG | - | chr5.1:42930894-42930913 | None:intergenic | 35.0% | |
| CCGAATTGCTCTATCAAATA+AGG | - | chr5.1:42928775-42928794 | None:intergenic | 35.0% | |
| CTATTTGTGATCCAGTTGAT+TGG | + | chr5.1:42927358-42927377 | MS.gene96526:CDS | 35.0% | |
| CTGATAAGCTAGGGTTATAA+TGG | - | chr5.1:42927186-42927205 | None:intergenic | 35.0% | |
| GATTTCATTATGGAGTTAGC+CGG | - | chr5.1:42929701-42929720 | None:intergenic | 35.0% | |
| GTGATGTGTATATGGAATGT+TGG | - | chr5.1:42930656-42930675 | None:intergenic | 35.0% | |
| GTTCATTTCCATCACATCTT+AGG | + | chr5.1:42930683-42930702 | MS.gene96526:intron | 35.0% | |
| TAACAAGTATGCTTATGTCC+AGG | + | chr5.1:42929998-42930017 | MS.gene96526:CDS | 35.0% | |
| TACAGTGAGAATGAGAGATA+TGG | + | chr5.1:42930512-42930531 | MS.gene96526:intron | 35.0% | |
| TAGATATTAGGACTTCAGAG+AGG | - | chr5.1:42930615-42930634 | None:intergenic | 35.0% | |
| TCAGCTTATGCTTATCTCAT+TGG | + | chr5.1:42929533-42929552 | MS.gene96526:intron | 35.0% | |
| TCCAAAATAAGCTTACAGAG+AGG | - | chr5.1:42929586-42929605 | None:intergenic | 35.0% | |
| TCCCATCTCTGAATCAATAA+TGG | - | chr5.1:42930895-42930914 | None:intergenic | 35.0% | |
| TGATATACTCAGATGCTAAG+GGG | - | chr5.1:42927225-42927244 | None:intergenic | 35.0% | |
| TGATTGTTGAGATGCACAAT+GGG | - | chr5.1:42930027-42930046 | None:intergenic | 35.0% | |
| TGCAGAACCAACATTGTAAA+TGG | - | chr5.1:42929279-42929298 | None:intergenic | 35.0% | |
| TTCATTCTGTCTGTTCATGT+TGG | + | chr5.1:42929477-42929496 | MS.gene96526:intron | 35.0% | |
| TTCTATGCATCTCCATGAAA+CGG | - | chr5.1:42929045-42929064 | None:intergenic | 35.0% | |
| TTGATTGTTGAGATGCACAA+TGG | - | chr5.1:42930028-42930047 | None:intergenic | 35.0% | |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | - | chr5.1:42926987-42927006 | None:intergenic | 35.0% |
| ! | ATTTTTACGTTGTAGGTGCA+TGG | + | chr5.1:42930554-42930573 | MS.gene96526:intron | 35.0% |
| ! | CAGGAGAAGTATAGAAAAAG+TGG | + | chr5.1:42927265-42927284 | MS.gene96526:intron | 35.0% |
| ! | CTGGGAGTTATTTCAATCAA+CGG | + | chr5.1:42930210-42930229 | MS.gene96526:CDS | 35.0% |
| ! | GATCAGTGTTTTGTGTTTCT+GGG | + | chr5.1:42927627-42927646 | MS.gene96526:CDS | 35.0% |
| ! | TAATGGATAGCTGATAAGCT+AGG | - | chr5.1:42927196-42927215 | None:intergenic | 35.0% |
| ! | TCCACCATCTTTTCTACAAT+AGG | - | chr5.1:42930471-42930490 | None:intergenic | 35.0% |
| ! | TCCTCTCTGTAAGCTTATTT+TGG | + | chr5.1:42929582-42929601 | MS.gene96526:CDS | 35.0% |
| ! | TGATCAGTGTTTTGTGTTTC+TGG | + | chr5.1:42927626-42927645 | MS.gene96526:CDS | 35.0% |
| ! | TGATTTCCTTTTCCATCTTG+TGG | + | chr5.1:42929956-42929975 | MS.gene96526:CDS | 35.0% |
| ! | TGGGAGTTATTTCAATCAAC+GGG | + | chr5.1:42930211-42930230 | MS.gene96526:CDS | 35.0% |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | - | chr5.1:42926986-42927005 | None:intergenic | 35.0% |
| ! | TTGCTATTATGCATGTATGC+AGG | + | chr5.1:42929559-42929578 | MS.gene96526:intron | 35.0% |
| ! | TTTCTGGTATACGAGAATCA+AGG | - | chr5.1:42931008-42931027 | None:intergenic | 35.0% |
| !! | AAGTTGATTTCTGTTGGCTT+TGG | + | chr5.1:42929231-42929250 | MS.gene96526:intron | 35.0% |
| !! | ACCCATTATTGATTCAGAGA+TGG | + | chr5.1:42930890-42930909 | MS.gene96526:CDS | 35.0% |
| !! | CCCATTATTGATTCAGAGAT+GGG | + | chr5.1:42930891-42930910 | MS.gene96526:CDS | 35.0% |
| !! | TACAATGTTGGTTCTGCAAA+AGG | + | chr5.1:42929281-42929300 | MS.gene96526:CDS | 35.0% |
| !! | TCTTTTGGCAGCATTTGTTA+TGG | + | chr5.1:42929743-42929762 | MS.gene96526:CDS | 35.0% |
| !! | TTAGGTTTAGTTTGGGAGTT+TGG | + | chr5.1:42928696-42928715 | MS.gene96526:intron | 35.0% |
| !!! | GTTTTGAAGTACCTGATTGT+TGG | - | chr5.1:42926380-42926399 | None:intergenic | 35.0% |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | + | chr5.1:42929587-42929606 | MS.gene96526:CDS | 35.0% |
| !!! | TGACGTGTGAATTTTTAGGT+TGG | + | chr5.1:42930808-42930827 | MS.gene96526:intron | 35.0% |
| !!! | TGTGAATTTTTAGGTTGGAG+CGG | + | chr5.1:42930813-42930832 | MS.gene96526:intron | 35.0% |
| ACAAAATCCCCCTAATTTGG+TGG | - | chr5.1:42928926-42928945 | None:intergenic | 40.0% | |
| ACAGTACATGTCATAGTGTC+TGG | + | chr5.1:42929626-42929645 | MS.gene96526:CDS | 40.0% | |
| ACTGATCACAGCAAGATAAG+TGG | - | chr5.1:42927614-42927633 | None:intergenic | 40.0% | |
| AGTTATCAGCCCACCTAAAA+TGG | - | chr5.1:42930290-42930309 | None:intergenic | 40.0% | |
| ATTCGTGTTAGTATCCATGG+TGG | + | chr5.1:42929656-42929675 | MS.gene96526:CDS | 40.0% | |
| CAAAATCCCCCTAATTTGGT+GGG | - | chr5.1:42928925-42928944 | None:intergenic | 40.0% | |
| CAACAACAACATCAGTGAAG+TGG | + | chr5.1:42927288-42927307 | MS.gene96526:CDS | 40.0% | |
| CAGTACATGTCATAGTGTCT+GGG | + | chr5.1:42929627-42929646 | MS.gene96526:CDS | 40.0% | |
| CATTCTTGCCTATCTTTGAC+CGG | - | chr5.1:42929917-42929936 | None:intergenic | 40.0% | |
| CCATATACACATCACATCTC+AGG | + | chr5.1:42930661-42930680 | MS.gene96526:intron | 40.0% | |
| CCTGAGATGTGATGTGTATA+TGG | - | chr5.1:42930664-42930683 | None:intergenic | 40.0% | |
| CGTTTCAGATAAGAGGAATC+CGG | + | chr5.1:42929895-42929914 | MS.gene96526:intron | 40.0% | |
| CTGAATATGCATCCGAACAT+AGG | + | chr5.1:42930783-42930802 | MS.gene96526:intron | 40.0% | |
| GAAAACCTCATACCTTAGAG+AGG | - | chr5.1:42926457-42926476 | None:intergenic | 40.0% | |
| GGATCTACATCTATGCTCAT+GGG | + | chr5.1:42930367-42930386 | MS.gene96526:CDS | 40.0% | |
| TATGCTCATGGGCATGATAT+TGG | + | chr5.1:42930378-42930397 | MS.gene96526:CDS | 40.0% | |
| TCTGCAAAAGGCTGTTAAGA+TGG | + | chr5.1:42929293-42929312 | MS.gene96526:CDS | 40.0% | |
| TCTGTTCATGTTGGATTCGT+TGG | + | chr5.1:42929486-42929505 | MS.gene96526:intron | 40.0% | |
| TGGATCTACATCTATGCTCA+TGG | + | chr5.1:42930366-42930385 | MS.gene96526:CDS | 40.0% | |
| TGGTGAACATGGAGCAAAAA+AGG | + | chr5.1:42927308-42927327 | MS.gene96526:CDS | 40.0% | |
| TGTTAACGCCAAGAATCACA+AGG | - | chr5.1:42927396-42927415 | None:intergenic | 40.0% | |
| TTATGGCTGTCATGCTCTTA+TGG | + | chr5.1:42929355-42929374 | MS.gene96526:CDS | 40.0% | |
| TTGTGATTCTTGGCGTTAAC+AGG | + | chr5.1:42927395-42927414 | MS.gene96526:CDS | 40.0% | |
| ! | ATTTGGAGTCCCACCAAATT+AGG | + | chr5.1:42928913-42928932 | MS.gene96526:intron | 40.0% |
| ! | CCCTTGAAGATTGGTGTTTA+TGG | + | chr5.1:42930157-42930176 | MS.gene96526:intron | 40.0% |
| ! | CGTTGATTGAAATAACTCCC+AGG | - | chr5.1:42930212-42930231 | None:intergenic | 40.0% |
| ! | CTGATTCGTGTTAGTATCCA+TGG | + | chr5.1:42929653-42929672 | MS.gene96526:CDS | 40.0% |
| ! | GGATTCGTTGGTTACGTATA+CGG | + | chr5.1:42929498-42929517 | MS.gene96526:intron | 40.0% |
| ! | GGCATGACGTGTGAATTTTT+AGG | + | chr5.1:42930804-42930823 | MS.gene96526:intron | 40.0% |
| ! | TTGAAGTACCTGATTGTTGG+TGG | - | chr5.1:42926377-42926396 | None:intergenic | 40.0% |
| ! | TTGATGGGAACCATTTTAGG+TGG | + | chr5.1:42930277-42930296 | MS.gene96526:CDS | 40.0% |
| ! | TTTGGAGTCCCACCAAATTA+GGG | + | chr5.1:42928914-42928933 | MS.gene96526:intron | 40.0% |
| !! | CTGTTGATGGGAACCATTTT+AGG | + | chr5.1:42930274-42930293 | MS.gene96526:CDS | 40.0% |
| !! | GGTTTTGTCCTTGTGATTCT+TGG | + | chr5.1:42927385-42927404 | MS.gene96526:CDS | 40.0% |
| !! | GTTTAGTTTGGGAGTTTGGA+GGG | + | chr5.1:42928700-42928719 | MS.gene96526:intron | 40.0% |
| !! | TGATGGGAACCATTTTAGGT+GGG | + | chr5.1:42930278-42930297 | MS.gene96526:CDS | 40.0% |
| !! | TGCTGATTTAGCCTCCAAAA+TGG | - | chr5.1:42926920-42926939 | None:intergenic | 40.0% |
| !! | TTTACCCTCTCTAAGGTATG+AGG | + | chr5.1:42926449-42926468 | MS.gene96526:intron | 40.0% |
| !! | TTTAGTTTGGGAGTTTGGAG+GGG | + | chr5.1:42928701-42928720 | MS.gene96526:intron | 40.0% |
| !!! | ATTTTAGGTGGGCTGATAAC+TGG | + | chr5.1:42930289-42930308 | MS.gene96526:CDS | 40.0% |
| !!! | CTTTTGAGACTGTTTGGAAG+AGG | - | chr5.1:42928047-42928066 | None:intergenic | 40.0% |
| AAGCAACACCCCAGAAAAAC+TGG | - | chr5.1:42927657-42927676 | None:intergenic | 45.0% | |
| AAGTCGCTGGTGCAATGTTT+CGG | - | chr5.1:42930941-42930960 | None:intergenic | 45.0% | |
| ACACCAATCTTCAAGGGACA+TGG | - | chr5.1:42930154-42930173 | None:intergenic | 45.0% | |
| ACGAGAATCAAGGTGATCGT+GGG | - | chr5.1:42930998-42931017 | None:intergenic | 45.0% | |
| AGAGGAATCCGGTCAAAGAT+AGG | + | chr5.1:42929906-42929925 | MS.gene96526:CDS | 45.0% | |
| ATCTTGTGGAGACTCTTGTC+AGG | + | chr5.1:42929970-42929989 | MS.gene96526:CDS | 45.0% | |
| CACCAATCTTCAAGGGACAT+GGG | - | chr5.1:42930153-42930172 | None:intergenic | 45.0% | |
| CATCAGTGAAGTGGTGAACA+TGG | + | chr5.1:42927297-42927316 | MS.gene96526:CDS | 45.0% | |
| CCATGAAACGGAGACAGTTA+GGG | - | chr5.1:42929033-42929052 | None:intergenic | 45.0% | |
| CTTGTGGCGTATGATTGTTC+AGG | + | chr5.1:42930244-42930263 | MS.gene96526:CDS | 45.0% | |
| GACATGCACCTAAGATGTGA+TGG | - | chr5.1:42930694-42930713 | None:intergenic | 45.0% | |
| GAGAGTCGCATATGCGTTTA+TGG | + | chr5.1:42929338-42929357 | MS.gene96526:CDS | 45.0% | |
| GAGTCTCCACAAGATGGAAA+AGG | - | chr5.1:42929965-42929984 | None:intergenic | 45.0% | |
| GATGGTATGGAATCTTCCAG+AGG | + | chr5.1:42929311-42929330 | MS.gene96526:CDS | 45.0% | |
| GCATATTCAGCAATGCGAGT+TGG | - | chr5.1:42930773-42930792 | None:intergenic | 45.0% | |
| GGTGCAATGTTTCGGAAATC+TGG | - | chr5.1:42930933-42930952 | None:intergenic | 45.0% | |
| GTGTTTGGGCATGGATGAAA+TGG | + | chr5.1:42930323-42930342 | MS.gene96526:CDS | 45.0% | |
| TACGAGAATCAAGGTGATCG+TGG | - | chr5.1:42930999-42931018 | None:intergenic | 45.0% | |
| TATGCGACTCTCATAACCTC+TGG | - | chr5.1:42929330-42929349 | None:intergenic | 45.0% | |
| TCACACGTCATGCCTATGTT+CGG | - | chr5.1:42930798-42930817 | None:intergenic | 45.0% | |
| TCCATGAAACGGAGACAGTT+AGG | - | chr5.1:42929034-42929053 | None:intergenic | 45.0% | |
| TGACAAGAGTCTCCACAAGA+TGG | - | chr5.1:42929971-42929990 | None:intergenic | 45.0% | |
| TGAGACTGTTTGGAAGAGGT+TGG | - | chr5.1:42928043-42928062 | None:intergenic | 45.0% | |
| TGCTATTAGGACACTGCGAT+GGG | + | chr5.1:42929781-42929800 | MS.gene96526:CDS | 45.0% | |
| TGCTCTTATGGATGGCATTG+TGG | + | chr5.1:42929367-42929386 | MS.gene96526:CDS | 45.0% | |
| TGGATGGCATTGTGGTCATT+TGG | + | chr5.1:42929375-42929394 | MS.gene96526:CDS | 45.0% | |
| TTGGAGTCCCACCAAATTAG+GGG | + | chr5.1:42928915-42928934 | MS.gene96526:intron | 45.0% | |
| ! | ACATGGAGCAAAAAAGGCGT+TGG | + | chr5.1:42927314-42927333 | MS.gene96526:CDS | 45.0% |
| ! | ATGGAGTTGGTTGTTGCTGT+TGG | + | chr5.1:42927543-42927562 | MS.gene96526:CDS | 45.0% |
| ! | CTGATAACTGGAACTTGCTC+TGG | + | chr5.1:42930301-42930320 | MS.gene96526:CDS | 45.0% |
| ! | CTGGTTTGACAGAGGATTAC+TGG | + | chr5.1:42927479-42927498 | MS.gene96526:CDS | 45.0% |
| ! | GGTGTTGTAGCTTCAAGCAT+GGG | + | chr5.1:42929405-42929424 | MS.gene96526:CDS | 45.0% |
| ! | TGAGAGGTAGGGCTTTTAAG+AGG | + | chr5.1:42928262-42928281 | MS.gene96526:intron | 45.0% |
| ! | TGGAACTTGCTCTGGTGTTT+GGG | + | chr5.1:42930309-42930328 | MS.gene96526:CDS | 45.0% |
| ! | TGGAGTTGGTTGTTGCTGTT+GGG | + | chr5.1:42927544-42927563 | MS.gene96526:CDS | 45.0% |
| !! | GGTTTAGTTTGGGAGTTTGG+AGG | + | chr5.1:42928699-42928718 | MS.gene96526:intron | 45.0% |
| !! | TAAGTACACGTACCGGTTCA+TGG | + | chr5.1:42927447-42927466 | MS.gene96526:CDS | 45.0% |
| !! | TGGTGTTGTAGCTTCAAGCA+TGG | + | chr5.1:42929404-42929423 | MS.gene96526:CDS | 45.0% |
| !!! | TGGGGTGTTGCTTTTGCTAT+TGG | + | chr5.1:42927664-42927683 | MS.gene96526:CDS | 45.0% |
| !!! | TTTTTAGGTTGGAGCGGCAA+TGG | + | chr5.1:42930819-42930838 | MS.gene96526:intron | 45.0% |
| AGCTCCTATGTTGAAGTCGC+TGG | - | chr5.1:42930954-42930973 | None:intergenic | 50.0% | |
| CAAAACCCACGCCAATCAAC+TGG | - | chr5.1:42927372-42927391 | None:intergenic | 50.0% | |
| CAGCCTCATTCTCCATGAAC+CGG | - | chr5.1:42927462-42927481 | None:intergenic | 50.0% | |
| CCCTAACTGTCTCCGTTTCA+TGG | + | chr5.1:42929030-42929049 | MS.gene96526:intron | 50.0% | |
| CTCCCATGTCCCTTGAAGAT+TGG | + | chr5.1:42930148-42930167 | MS.gene96526:intron | 50.0% | |
| CTGCTATTAGGACACTGCGA+TGG | + | chr5.1:42929780-42929799 | MS.gene96526:CDS | 50.0% | |
| GAAGTTCAGGAGGAAGTGGA+AGG | - | chr5.1:42929002-42929021 | None:intergenic | 50.0% | |
| GAGGAAGTGGAAGGAAAGGA+GGG | - | chr5.1:42928993-42929012 | None:intergenic | 50.0% | |
| GGACAGACACCTTCATCATC+TGG | - | chr5.1:42927582-42927601 | None:intergenic | 50.0% | |
| GGCTGTCATGCTCTTATGGA+TGG | + | chr5.1:42929359-42929378 | MS.gene96526:CDS | 50.0% | |
| GTGATCCAGTTGATTGGCGT+GGG | + | chr5.1:42927364-42927383 | MS.gene96526:CDS | 50.0% | |
| TAGGGTCTGTCTGGAAGTTC+AGG | - | chr5.1:42929015-42929034 | None:intergenic | 50.0% | |
| TAGTATCCATGGTGGTTGCG+AGG | + | chr5.1:42929664-42929683 | MS.gene96526:CDS | 50.0% | |
| TATTAGGACACTGCGATGGG+AGG | + | chr5.1:42929784-42929803 | MS.gene96526:CDS | 50.0% | |
| TCAGGAGGAAGTGGAAGGAA+AGG | - | chr5.1:42928997-42929016 | None:intergenic | 50.0% | |
| TCTGGAAGTTCAGGAGGAAG+TGG | - | chr5.1:42929006-42929025 | None:intergenic | 50.0% | |
| TGCACCAGCGACTTCAACAT+AGG | + | chr5.1:42930947-42930966 | MS.gene96526:CDS | 50.0% | |
| TGGAAGGAAAGGAGGGCTTT+GGG | - | chr5.1:42928986-42929005 | None:intergenic | 50.0% | |
| TGGAGTCCCACCAAATTAGG+GGG | + | chr5.1:42928916-42928935 | MS.gene96526:intron | 50.0% | |
| TGTGATCCAGTTGATTGGCG+TGG | + | chr5.1:42927363-42927382 | MS.gene96526:CDS | 50.0% | |
| TTCCACTGCCACCAACAATC+AGG | + | chr5.1:42926366-42926385 | MS.gene96526:CDS | 50.0% | |
| ! | AACGGGAGTTGAAGCACTTG+TGG | + | chr5.1:42930228-42930247 | MS.gene96526:CDS | 50.0% |
| ! | AAGCGGTGGACTTTGTTGAG+AGG | + | chr5.1:42928728-42928747 | MS.gene96526:intron | 50.0% |
| ! | AGCGGTGGACTTTGTTGAGA+GGG | + | chr5.1:42928729-42928748 | MS.gene96526:intron | 50.0% |
| ! | CTGGAACTTGCTCTGGTGTT+TGG | + | chr5.1:42930308-42930327 | MS.gene96526:CDS | 50.0% |
| ! | CTGGGCTCACCAGTTTTTCT+GGG | + | chr5.1:42927645-42927664 | MS.gene96526:CDS | 50.0% |
| ! | TCAGGTGCTGTGCTGTTGAT+GGG | + | chr5.1:42930262-42930281 | MS.gene96526:CDS | 50.0% |
| ! | TCTGGGCTCACCAGTTTTTC+TGG | + | chr5.1:42927644-42927663 | MS.gene96526:CDS | 50.0% |
| ! | TGGGCTCACCAGTTTTTCTG+GGG | + | chr5.1:42927646-42927665 | MS.gene96526:CDS | 50.0% |
| ! | TTCAGGTGCTGTGCTGTTGA+TGG | + | chr5.1:42930261-42930280 | MS.gene96526:CDS | 50.0% |
| ! | TTGTGGTCATTTGGAGCTGC+TGG | + | chr5.1:42929384-42929403 | MS.gene96526:CDS | 50.0% |
| !! | GAATGAGGCTGGTTTGACAG+AGG | + | chr5.1:42927471-42927490 | MS.gene96526:CDS | 50.0% |
| !! | GTACCGGTTCATGGAGAATG+AGG | + | chr5.1:42927456-42927475 | MS.gene96526:CDS | 50.0% |
| !! | TACCTGATTGTTGGTGGCAG+TGG | - | chr5.1:42926371-42926390 | None:intergenic | 50.0% |
| AACATAGGAGCTCGCGTGCA+AGG | + | chr5.1:42930962-42930981 | MS.gene96526:CDS | 55.0% | |
| ACATAGGAGCTCGCGTGCAA+GGG | + | chr5.1:42930963-42930982 | MS.gene96526:CDS | 55.0% | |
| ACCGTTCTGCTAGAGATGCC+TGG | + | chr5.1:42930191-42930210 | MS.gene96526:CDS | 55.0% | |
| CCCAGGCATCTCTAGCAGAA+CGG | - | chr5.1:42930195-42930214 | None:intergenic | 55.0% | |
| CCGTTCTGCTAGAGATGCCT+GGG | + | chr5.1:42930192-42930211 | MS.gene96526:CDS | 55.0% | |
| CGGTTCATGGAGAATGAGGC+TGG | + | chr5.1:42927460-42927479 | MS.gene96526:CDS | 55.0% | |
| CTTGCTCTGGTGTTTGGGCA+TGG | + | chr5.1:42930314-42930333 | MS.gene96526:CDS | 55.0% | |
| GCGCGCAATCCAGATGATGA+AGG | + | chr5.1:42927570-42927589 | MS.gene96526:CDS | 55.0% | |
| GGACTGCTCTTGGATGGAGT+TGG | + | chr5.1:42927530-42927549 | MS.gene96526:CDS | 55.0% | |
| GGAGACAGTTAGGGTCTGTC+TGG | - | chr5.1:42929024-42929043 | None:intergenic | 55.0% | |
| GGAGGAAGTGGAAGGAAAGG+AGG | - | chr5.1:42928994-42929013 | None:intergenic | 55.0% | |
| GGTCTGTCTGGAAGTTCAGG+AGG | - | chr5.1:42929012-42929031 | None:intergenic | 55.0% | |
| GTAGCTTCAAGCATGGGCGA+CGG | + | chr5.1:42929411-42929430 | MS.gene96526:CDS | 55.0% | |
| GTGGAAGGAAAGGAGGGCTT+TGG | - | chr5.1:42928987-42929006 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGT+CGG | + | chr5.1:42928705-42928724 | MS.gene96526:intron | 55.0% | |
| TTGCGAGGCTGCATCAGTTC+CGG | + | chr5.1:42929679-42929698 | MS.gene96526:CDS | 55.0% | |
| TTTGGGAGGGACAGCCTTTG+GGG | - | chr5.1:42928969-42928988 | None:intergenic | 55.0% | |
| ! | CTTTGGGAGGGACAGCCTTT+GGG | - | chr5.1:42928970-42928989 | None:intergenic | 55.0% |
| !! | AAGGAAAGGAGGGCTTTGGG+AGG | - | chr5.1:42928983-42929002 | None:intergenic | 55.0% |
| !! | AGGAAAGGAGGGCTTTGGGA+GGG | - | chr5.1:42928982-42929001 | None:intergenic | 55.0% |
| !! | GAGATGCACAATGGGCTACC+TGG | - | chr5.1:42930019-42930038 | None:intergenic | 55.0% |
| !! | GGCGTTGGCACGATGTATTC+TGG | + | chr5.1:42927329-42927348 | MS.gene96526:CDS | 55.0% |
| ATGCAGCCTCGCAACCACCA+TGG | - | chr5.1:42929673-42929692 | None:intergenic | 60.0% | |
| CCACTCTATGCTGTCGCTGG+CGG | + | chr5.1:42927502-42927521 | MS.gene96526:CDS | 60.0% | |
| GAGTTTGGAGGGGTCGGAAG+CGG | + | chr5.1:42928711-42928730 | MS.gene96526:intron | 60.0% | |
| GCGTTGGGACTGCTCTTGGA+TGG | + | chr5.1:42927524-42927543 | MS.gene96526:CDS | 60.0% | |
| GGTGGCTTCTTGTGGTGAGC+TGG | + | chr5.1:42929442-42929461 | MS.gene96526:intron | 60.0% | |
| GGTTGGAGCGGCAATGGTTG+TGG | + | chr5.1:42930825-42930844 | MS.gene96526:intron | 60.0% | |
| TGGAGCGGCAATGGTTGTGG+TGG | + | chr5.1:42930828-42930847 | MS.gene96526:CDS | 60.0% | |
| TGGCCACTCTATGCTGTCGC+TGG | + | chr5.1:42927499-42927518 | MS.gene96526:CDS | 60.0% | |
| !! | GCTTTGGGAGGGACAGCCTT+TGG | - | chr5.1:42928971-42928990 | None:intergenic | 60.0% |
| ATGCTGTCGCTGGCGGCGTT+GGG | + | chr5.1:42927509-42927528 | MS.gene96526:CDS | 65.0% | |
| CCGCCAGCGACAGCATAGAG+TGG | - | chr5.1:42927505-42927524 | None:intergenic | 65.0% | |
| CGGACGCTGGTGGCTTCTTG+TGG | + | chr5.1:42929434-42929453 | MS.gene96526:CDS | 65.0% | |
| GCTTCAAGCATGGGCGACGG+CGG | + | chr5.1:42929414-42929433 | MS.gene96526:CDS | 65.0% | |
| TATGCTGTCGCTGGCGGCGT+TGG | + | chr5.1:42927508-42927527 | MS.gene96526:CDS | 65.0% | |
| TTTGGAGGGGTCGGAAGCGG+TGG | + | chr5.1:42928714-42928733 | MS.gene96526:intron | 65.0% | |
| ! | GGCGGCGTTGGGACTGCTCT+TGG | + | chr5.1:42927520-42927539 | MS.gene96526:CDS | 70.0% |
| ! | GCATGGGCGACGGCGGACGC+TGG | + | chr5.1:42929421-42929440 | MS.gene96526:CDS | 80.0% |
| ! | TGGGCGACGGCGGACGCTGG+TGG | + | chr5.1:42929424-42929443 | MS.gene96526:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 42926358 | 42931035 | 42926358 | ID=MS.gene96526 |
| chr5.1 | mRNA | 42926358 | 42931035 | 42926358 | ID=MS.gene96526.t1;Parent=MS.gene96526 |
| chr5.1 | exon | 42926358 | 42926387 | 42926358 | ID=MS.gene96526.t1.exon1;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42926358 | 42926387 | 42926358 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| chr5.1 | exon | 42927268 | 42927728 | 42927268 | ID=MS.gene96526.t1.exon2;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42927268 | 42927728 | 42927268 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| chr5.1 | exon | 42929272 | 42929455 | 42929272 | ID=MS.gene96526.t1.exon3;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42929272 | 42929455 | 42929272 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| chr5.1 | exon | 42929581 | 42929805 | 42929581 | ID=MS.gene96526.t1.exon4;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42929581 | 42929805 | 42929581 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| chr5.1 | exon | 42929903 | 42930019 | 42929903 | ID=MS.gene96526.t1.exon5;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42929903 | 42930019 | 42929903 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| chr5.1 | exon | 42930166 | 42930399 | 42930166 | ID=MS.gene96526.t1.exon6;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42930166 | 42930399 | 42930166 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| chr5.1 | exon | 42930826 | 42931035 | 42930826 | ID=MS.gene96526.t1.exon7;Parent=MS.gene96526.t1 |
| chr5.1 | CDS | 42930826 | 42931035 | 42930826 | ID=cds.MS.gene96526.t1;Parent=MS.gene96526.t1 |
| Gene Sequence |
| Protein sequence |
