AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98883

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98883.t1 MTR_5g083860 97.189 249 7 0 13 261 77 325 5.96e-180 497
MS.gene98883.t1 MTR_3g094670 81.928 249 45 0 13 261 74 322 1.37e-142 403
MS.gene98883.t1 MTR_3g094650 78.313 249 54 0 13 261 74 322 1.01e-138 393
MS.gene98883.t1 MTR_3g094630 79.518 249 51 0 13 261 74 322 5.66e-134 381
MS.gene98883.t1 MTR_3g466200 72.400 250 68 1 13 261 71 320 5.93e-131 373
MS.gene98883.t1 MTR_5g074970 68.127 251 78 2 13 261 76 326 3.44e-120 346
MS.gene98883.t1 MTR_2g084080 65.462 249 84 1 13 261 71 317 9.22e-116 335
MS.gene98883.t1 MTR_2g084110 63.454 249 89 1 13 261 71 317 8.71e-112 325
MS.gene98883.t1 MTR_2g084090 62.651 249 92 1 13 261 71 318 9.76e-110 319
MS.gene98883.t1 MTR_2g084020 64.000 250 87 3 13 261 71 318 1.15e-109 319
MS.gene98883.t1 MTR_3g072190 63.052 249 90 1 13 261 5 251 1.16e-109 317
MS.gene98883.t1 MTR_3g072190 63.052 249 90 1 13 261 72 318 4.86e-109 318
MS.gene98883.t1 MTR_2g084010 62.000 250 92 2 13 261 71 318 1.08e-108 317
MS.gene98883.t1 MTR_7g072510 61.847 249 93 1 13 261 66 312 2.60e-108 315
MS.gene98883.t1 MTR_4g083710 62.698 252 91 3 13 261 73 324 6.41e-107 312
MS.gene98883.t1 MTR_7g072480 61.446 249 94 1 13 261 70 316 4.61e-105 307
MS.gene98883.t1 MTR_2g084000 60.000 250 97 3 13 261 72 319 6.98e-103 302
MS.gene98883.t1 MTR_5g074860 61.265 253 90 5 13 260 75 324 8.50e-103 302
MS.gene98883.t1 MTR_4g029170 60.956 251 94 3 13 261 73 321 9.79e-103 301
MS.gene98883.t1 MTR_3g466180 61.847 249 93 1 13 261 77 323 3.46e-100 295
MS.gene98883.t1 MTR_4g074995 60.714 252 83 4 13 261 70 308 5.60e-100 294
MS.gene98883.t1 MTR_4g029180 58.964 251 99 3 13 261 73 321 5.06e-99 292
MS.gene98883.t1 MTR_4g029190 55.823 249 110 0 13 261 92 340 8.84e-99 292
MS.gene98883.t1 MTR_4g029200 55.823 249 108 1 13 261 92 338 1.74e-98 291
MS.gene98883.t1 MTR_5g074760 57.480 254 100 5 13 261 71 321 1.09e-95 284
MS.gene98883.t1 MTR_5g074740 57.874 254 99 5 13 261 71 321 1.90e-95 283
MS.gene98883.t1 MTR_5g074710 57.874 254 99 5 13 261 71 321 2.87e-95 283
MS.gene98883.t1 MTR_4g074990 58.167 251 88 3 13 261 70 305 5.87e-95 281
MS.gene98883.t1 MTR_7g026990 55.823 249 107 2 13 261 77 322 6.89e-93 276
MS.gene98883.t1 MTR_5g021060 51.751 257 114 3 13 261 76 330 6.37e-90 270
MS.gene98883.t1 MTR_8g076820 53.696 257 109 3 13 261 76 330 1.55e-89 268
MS.gene98883.t1 MTR_1g115900 55.159 252 107 4 13 261 73 321 4.57e-89 267
MS.gene98883.t1 MTR_3g467600 54.331 254 109 4 13 261 73 324 4.86e-89 267
MS.gene98883.t1 MTR_4g122640 50.988 253 120 2 13 261 84 336 1.96e-85 258
MS.gene98883.t1 MTR_5g014100 52.290 262 110 3 13 261 72 331 1.50e-83 253
MS.gene98883.t1 MTR_7g093370 50.579 259 116 5 13 261 115 371 3.17e-83 254
MS.gene98883.t1 MTR_2g040000 51.724 261 110 5 13 261 75 331 7.01e-82 249
MS.gene98883.t1 MTR_4g074980 54.400 250 87 4 13 261 71 294 2.31e-81 246
MS.gene98883.t1 MTR_2g029860 50.388 258 117 3 13 261 75 330 1.22e-80 246
MS.gene98883.t1 MTR_5g017850 48.828 256 122 3 13 261 73 326 3.54e-80 244
MS.gene98883.t1 MTR_5g017860 48.438 256 123 3 13 261 73 326 9.73e-80 243
MS.gene98883.t1 MTR_2g029800 50.388 258 117 3 13 261 75 330 2.10e-79 243
MS.gene98883.t1 MTR_4g125940 50.385 260 114 5 13 261 19 274 1.03e-78 239
MS.gene98883.t1 MTR_1g054205 49.231 260 118 5 13 261 70 326 1.43e-78 240
MS.gene98883.t1 MTR_4g125940 50.385 260 114 5 13 261 74 329 4.17e-78 239
MS.gene98883.t1 MTR_1g022970 48.450 258 122 3 13 261 92 347 4.31e-78 240
MS.gene98883.t1 MTR_2g029750 49.612 258 119 4 13 261 75 330 2.34e-77 238
MS.gene98883.t1 MTR_2g029830 46.512 258 127 3 13 261 6 261 2.03e-76 233
MS.gene98883.t1 MTR_2g028980 49.612 258 119 4 13 261 75 330 2.22e-76 236
MS.gene98883.t1 MTR_2g029815 48.450 258 122 3 13 261 75 330 3.57e-76 235
MS.gene98883.t1 MTR_2g029560 46.124 258 128 4 13 261 70 325 6.58e-76 234
MS.gene98883.t1 MTR_2g029830 46.512 258 127 3 13 261 74 329 1.74e-75 233
MS.gene98883.t1 MTR_4g074980 62.842 183 66 2 13 193 71 253 7.33e-75 228
MS.gene98883.t1 MTR_5g049280 46.538 260 127 4 13 261 79 337 2.37e-74 230
MS.gene98883.t1 MTR_2g029820 47.287 258 125 3 13 261 75 330 3.42e-74 230
MS.gene98883.t1 MTR_2g029730 47.287 258 125 3 13 261 71 326 6.55e-74 229
MS.gene98883.t1 MTR_2g029740 46.899 258 126 4 13 261 75 330 9.35e-74 229
MS.gene98883.t1 MTR_4g031140 47.266 256 123 4 13 261 74 324 3.94e-73 227
MS.gene98883.t1 MTR_4g030890 46.875 256 124 4 13 261 146 396 6.80e-73 229
MS.gene98883.t1 MTR_5g074860 50.988 253 77 7 13 260 75 285 7.53e-73 224
MS.gene98883.t1 MTR_2g029910 44.186 258 134 3 13 261 76 332 3.54e-69 217
MS.gene98883.t1 MTR_2g029850 47.287 258 125 3 13 261 75 330 4.09e-69 217
MS.gene98883.t1 MTR_5g074700 50.661 227 94 6 38 261 3 214 1.51e-68 211
MS.gene98883.t1 MTR_1g077000 46.400 250 126 5 13 261 85 327 1.36e-67 212
MS.gene98883.t1 MTR_3g072210 56.684 187 77 3 77 261 54 238 1.75e-66 206
MS.gene98883.t1 MTR_3g092990 42.802 257 137 3 13 261 61 315 2.52e-65 206
MS.gene98883.t1 MTR_3g092990 42.802 257 137 3 13 261 72 326 4.68e-65 206
MS.gene98883.t1 MTR_0155s0040 44.000 250 132 5 13 261 73 315 6.21e-65 205
MS.gene98883.t1 MTR_7g029030 43.478 253 136 4 13 261 71 320 2.83e-63 201
MS.gene98883.t1 MTR_2g008710 43.846 260 128 6 13 261 73 325 1.02e-61 197
MS.gene98883.t1 MTR_1g086320 41.860 258 141 2 13 261 76 333 1.34e-61 197
MS.gene98883.t1 MTR_1g101830 43.580 257 130 6 13 261 73 322 1.42e-60 194
MS.gene98883.t1 MTR_7g072490 45.868 242 75 2 13 254 2 187 3.10e-60 189
MS.gene98883.t1 MTR_2g008730 45.082 244 119 5 29 261 62 301 4.39e-60 192
MS.gene98883.t1 MTR_1g025980 43.922 255 129 6 13 260 70 317 1.28e-59 191
MS.gene98883.t1 MTR_4g114210 43.295 261 129 7 13 261 67 320 3.38e-59 191
MS.gene98883.t1 MTR_5g022870 42.248 258 130 7 13 261 69 316 8.72e-59 189
MS.gene98883.t1 MTR_8g075100 43.023 258 128 7 13 261 72 319 1.03e-58 189
MS.gene98883.t1 MTR_1g038680 42.085 259 139 4 13 261 75 332 1.41e-58 189
MS.gene98883.t1 MTR_4g046713 40.234 256 144 3 13 261 73 326 7.89e-58 187
MS.gene98883.t1 MTR_2g088770 42.471 259 134 7 13 261 72 325 2.10e-57 186
MS.gene98883.t1 MTR_1g086490 40.602 266 140 4 13 261 76 340 3.32e-56 183
MS.gene98883.t1 MTR_4g133800 40.078 257 136 6 13 261 87 333 2.78e-55 181
MS.gene98883.t1 MTR_1g009750 40.385 260 140 6 13 261 73 328 3.70e-54 178
MS.gene98883.t1 MTR_4g087965 40.625 256 140 5 13 257 88 342 1.61e-53 177
MS.gene98883.t1 MTR_7g107520 39.453 256 142 5 13 261 71 320 6.44e-52 172
MS.gene98883.t1 MTR_1g066710 36.653 251 155 3 14 261 74 323 8.99e-52 171
MS.gene98883.t1 MTR_4g127670 39.080 261 140 6 13 261 70 323 1.24e-51 171
MS.gene98883.t1 MTR_6g027440 37.849 251 151 4 13 261 67 314 8.79e-51 169
MS.gene98883.t1 MTR_2g099175 37.165 261 145 6 13 261 82 335 1.43e-50 169
MS.gene98883.t1 MTR_1g090760 36.293 259 153 5 13 261 74 330 1.46e-50 169
MS.gene98883.t1 MTR_2g008160 39.464 261 139 7 13 261 70 323 3.49e-50 167
MS.gene98883.t1 MTR_5g016010 37.262 263 143 5 13 260 73 328 4.41e-50 167
MS.gene98883.t1 MTR_7g086820 36.614 254 149 4 13 261 66 312 4.65e-50 167
MS.gene98883.t1 MTR_6g043280 39.921 253 141 5 13 261 87 332 4.75e-50 167
MS.gene98883.t1 MTR_6g043460 38.340 253 146 5 13 261 82 328 6.03e-50 167
MS.gene98883.t1 MTR_2g437770 40.698 258 132 8 13 261 96 341 6.90e-50 167
MS.gene98883.t1 MTR_4g132490 33.858 254 162 2 13 261 75 327 8.62e-50 166
MS.gene98883.t1 MTR_8g062780 37.548 261 154 5 8 261 66 324 1.34e-48 163
MS.gene98883.t1 MTR_0286s0010 35.769 260 150 4 13 261 81 334 1.78e-48 163
MS.gene98883.t1 MTR_6g008075 35.769 260 150 4 13 261 81 334 1.78e-48 163
MS.gene98883.t1 MTR_1g066680 34.661 251 160 3 14 261 73 322 4.56e-48 162
MS.gene98883.t1 MTR_7g086870 35.200 250 155 4 13 261 68 311 8.03e-48 161
MS.gene98883.t1 MTR_1g066640 35.458 251 158 3 14 261 74 323 8.70e-48 161
MS.gene98883.t1 MTR_2g078610 35.106 282 145 6 13 257 122 402 1.01e-47 163
MS.gene98883.t1 MTR_4g095450 36.863 255 144 5 13 257 73 320 1.06e-47 161
MS.gene98883.t1 MTR_1g066380 34.661 251 160 3 14 261 6 255 1.26e-47 159
MS.gene98883.t1 MTR_2g077990 35.461 282 144 6 13 257 122 402 1.30e-47 163
MS.gene98883.t1 MTR_1g066380 34.661 251 160 3 14 261 74 323 7.70e-47 159
MS.gene98883.t1 MTR_2g067440 33.922 283 150 6 13 260 106 386 2.03e-46 159
MS.gene98883.t1 MTR_6g043240 36.905 252 148 7 13 261 88 331 2.98e-44 153
MS.gene98883.t1 MTR_4g132110 34.413 247 158 3 14 257 79 324 1.29e-43 150
MS.gene98883.t1 MTR_1g009750 37.209 258 134 7 13 261 73 311 9.20e-43 148
MS.gene98883.t1 MTR_3g105790 35.907 259 149 4 13 261 71 322 9.13e-42 145
MS.gene98883.t1 MTR_2g078280 34.559 272 140 6 13 247 122 392 1.44e-41 147
MS.gene98883.t1 MTR_4g132110 33.730 252 158 4 14 257 79 329 1.96e-41 145
MS.gene98883.t1 MTR_0147s0010 32.932 249 141 3 37 260 134 381 1.20e-40 144
MS.gene98883.t1 MTR_3g105790 35.685 241 144 2 30 261 8 246 3.41e-40 139
MS.gene98883.t1 MTR_5g033470 36.122 263 150 8 13 261 119 377 7.33e-40 142
MS.gene98883.t1 MTR_2g008160 36.471 255 120 7 13 261 70 288 2.86e-39 138
MS.gene98883.t1 MTR_2g029880 40.104 192 94 4 79 261 9 188 5.76e-38 132
MS.gene98883.t1 MTR_2g067450 33.206 262 153 7 13 260 56 309 2.74e-37 134
MS.gene98883.t1 MTR_2g008160 47.581 124 61 3 13 136 70 189 5.08e-28 106
MS.gene98883.t1 MTR_2g077980 30.496 282 140 9 29 261 11 285 4.82e-27 106
MS.gene98883.t1 MTR_5g074770 52.222 90 40 2 173 260 20 108 6.10e-26 98.6
MS.gene98883.t1 MTR_3g072260 77.419 62 14 0 13 74 72 133 9.37e-26 99.0
MS.gene98883.t1 MTR_2g078560 29.730 222 120 4 72 257 95 316 7.33e-25 101
MS.gene98883.t1 MTR_4g031040 37.500 168 66 4 28 195 3 131 1.18e-23 93.2
MS.gene98883.t1 MTR_7g086790 40.833 120 67 2 14 133 17 132 2.44e-22 91.7
MS.gene98883.t1 MTR_3g462850 38.028 142 76 4 131 261 9 149 2.85e-22 90.1
MS.gene98883.t1 MTR_5g058120 34.395 157 93 3 103 257 7 155 8.88e-22 91.7
MS.gene98883.t1 MTR_1g098320 44.737 76 42 0 182 257 45 120 2.41e-16 73.9
MS.gene98883.t1 MTR_7g107500 41.667 84 48 1 178 261 15 97 2.13e-13 65.1
MS.gene98883.t1 MTR_6g048160 52.308 65 27 2 13 77 29 89 2.76e-13 64.3
MS.gene98883.t1 MTR_3g107060 26.667 240 115 7 16 240 117 310 3.08e-13 68.6
MS.gene98883.t1 MTR_3g088160 28.497 193 111 5 60 243 180 354 6.52e-13 68.2
MS.gene98883.t1 MTR_3g088160 28.497 193 111 5 60 243 180 354 6.64e-13 68.2
MS.gene98883.t1 MTR_4g114220 40.385 104 38 4 13 108 49 136 6.06e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98883.t1 AT5G05340 75.100 249 62 0 13 261 76 324 2.82e-136 387
MS.gene98883.t1 AT5G58400 67.200 250 81 1 13 261 76 325 7.06e-117 338
MS.gene98883.t1 AT5G58390 65.600 250 85 1 13 261 67 316 3.01e-114 331
MS.gene98883.t1 AT1G14550 60.317 252 95 4 13 261 72 321 2.05e-99 293
MS.gene98883.t1 AT1G14540 55.777 251 107 3 13 261 67 315 2.40e-92 275
MS.gene98883.t1 AT4G36430 52.918 257 111 3 13 261 76 330 1.41e-91 274
MS.gene98883.t1 AT5G66390 52.140 257 113 3 13 261 79 333 7.31e-90 270
MS.gene98883.t1 AT2G18150 51.362 257 115 3 13 261 82 336 1.23e-88 266
MS.gene98883.t1 AT3G50990 51.751 257 114 4 13 261 87 341 3.56e-87 263
MS.gene98883.t1 AT2G18140 49.805 257 119 3 13 261 81 335 1.45e-84 256
MS.gene98883.t1 AT5G06720 50.775 258 116 4 13 261 78 333 1.75e-84 256
MS.gene98883.t1 AT1G44970 51.550 258 114 3 13 261 91 346 1.37e-83 254
MS.gene98883.t1 AT4G16270 52.918 257 109 4 13 261 96 348 1.97e-83 253
MS.gene98883.t1 AT5G06730 49.421 259 118 4 13 261 79 334 3.84e-82 251
MS.gene98883.t1 AT2G35380 50.763 262 114 3 13 261 76 335 4.23e-82 249
MS.gene98883.t1 AT3G32980 49.231 260 119 4 13 261 77 334 3.15e-79 243
MS.gene98883.t1 AT4G08770 50.385 260 116 4 13 261 70 327 6.28e-79 242
MS.gene98883.t1 AT5G19890 49.615 260 112 6 13 261 76 327 5.52e-78 239
MS.gene98883.t1 AT2G35380 51.220 246 105 3 29 261 4 247 1.25e-77 235
MS.gene98883.t1 AT4G08780 48.462 260 121 4 13 261 70 327 1.64e-77 238
MS.gene98883.t1 AT1G68850 44.444 261 132 4 13 261 76 335 1.73e-77 238
MS.gene98883.t1 AT1G49570 48.031 254 122 3 13 257 94 346 2.32e-75 233
MS.gene98883.t1 AT2G38380 47.876 259 123 5 13 261 77 333 8.37e-75 231
MS.gene98883.t1 AT2G38390 47.104 259 125 5 13 261 77 333 1.38e-74 231
MS.gene98883.t1 AT3G49120 48.462 260 121 4 13 261 78 335 2.84e-74 230
MS.gene98883.t1 AT3G49110 47.692 260 123 4 13 261 79 336 8.63e-74 229
MS.gene98883.t1 AT5G19880 46.743 261 125 4 13 261 71 329 2.58e-69 217
MS.gene98883.t1 AT2G22420 44.922 256 129 4 13 261 69 319 3.04e-69 217
MS.gene98883.t1 AT4G33420 46.000 250 127 5 13 261 83 325 4.83e-64 203
MS.gene98883.t1 AT5G64120 43.750 256 129 6 13 261 81 328 6.74e-64 203
MS.gene98883.t1 AT4G33420 46.000 250 127 5 13 261 130 372 2.04e-63 203
MS.gene98883.t1 AT5G51890 42.578 256 135 5 13 261 72 322 9.27e-61 194
MS.gene98883.t1 AT2G41480 43.295 261 129 7 13 261 75 328 1.07e-60 195
MS.gene98883.t1 AT1G05240 40.784 255 136 5 13 257 72 321 3.52e-60 193
MS.gene98883.t1 AT1G05250 40.784 255 136 5 13 257 72 321 3.52e-60 193
MS.gene98883.t1 AT3G01190 42.412 257 133 6 13 261 72 321 4.22e-60 193
MS.gene98883.t1 AT5G15180 40.856 257 139 5 13 261 78 329 9.11e-60 192
MS.gene98883.t1 AT5G42180 45.000 260 119 7 13 260 69 316 1.42e-59 191
MS.gene98883.t1 AT1G71695 42.688 253 138 4 13 261 90 339 1.53e-58 190
MS.gene98883.t1 AT5G17820 40.625 256 133 5 13 261 70 313 3.03e-58 188
MS.gene98883.t1 AT5G39580 43.750 256 130 7 13 261 71 319 3.69e-58 188
MS.gene98883.t1 AT5G17820 40.625 256 133 5 13 261 123 366 2.90e-57 187
MS.gene98883.t1 AT3G03670 40.541 259 138 4 13 261 69 321 2.08e-56 183
MS.gene98883.t1 AT4G11290 41.313 259 139 6 13 261 71 326 1.34e-55 181
MS.gene98883.t1 AT4G33870 34.266 286 145 4 13 257 114 397 3.64e-53 177
MS.gene98883.t1 AT5G40150 37.154 253 153 4 13 261 78 328 3.90e-53 175
MS.gene98883.t1 AT5G14130 38.132 257 147 4 13 261 78 330 7.17e-53 174
MS.gene98883.t1 AT3G21770 39.764 254 140 6 13 257 75 324 7.22e-53 174
MS.gene98883.t1 AT1G05260 40.927 259 138 7 13 261 72 325 9.02e-53 174
MS.gene98883.t1 AT5G14130 38.132 257 147 4 13 261 119 371 1.95e-52 174
MS.gene98883.t1 AT4G37530 38.636 264 140 5 13 261 73 329 2.13e-52 173
MS.gene98883.t1 AT5G64110 42.857 259 130 8 13 261 80 330 2.49e-52 173
MS.gene98883.t1 AT1G34510 38.800 250 144 6 13 261 68 309 1.20e-51 171
MS.gene98883.t1 AT5G64100 40.927 259 133 7 13 261 83 331 4.38e-51 170
MS.gene98883.t1 AT4G17690 38.492 252 151 3 13 261 72 322 6.38e-51 169
MS.gene98883.t1 AT4G30170 38.846 260 141 5 13 261 73 325 1.27e-50 169
MS.gene98883.t1 AT1G30870 38.550 262 141 6 10 261 94 345 1.70e-50 169
MS.gene98883.t1 AT2G18980 38.846 260 141 6 13 261 71 323 3.14e-50 167
MS.gene98883.t1 AT3G28200 36.220 254 153 4 13 261 67 316 5.81e-50 167
MS.gene98883.t1 AT4G37520 36.742 264 145 5 13 261 73 329 7.74e-50 167
MS.gene98883.t1 AT5G67400 37.308 260 149 5 13 261 73 329 1.05e-49 166
MS.gene98883.t1 AT2G34060 40.856 257 140 5 13 258 88 343 1.40e-49 166
MS.gene98883.t1 AT4G25980 35.878 262 148 7 13 261 72 326 6.38e-49 164
MS.gene98883.t1 AT5G47000 38.189 254 150 4 13 261 79 330 1.22e-48 164
MS.gene98883.t1 AT5G24070 36.015 261 147 6 13 261 83 335 4.33e-48 162
MS.gene98883.t1 AT2G43480 36.398 261 146 6 13 261 83 335 7.93e-48 162
MS.gene98883.t1 AT4G31760 36.822 258 148 4 13 261 75 326 8.67e-48 161
MS.gene98883.t1 AT4G37520 36.364 264 143 6 13 261 73 326 1.13e-47 161
MS.gene98883.t1 AT4G26010 38.000 250 146 5 13 261 68 309 1.54e-47 160
MS.gene98883.t1 AT4G26010 38.000 250 146 5 13 261 96 337 1.88e-47 160
MS.gene98883.t1 AT1G77100 39.844 256 141 8 13 261 70 319 2.17e-47 160
MS.gene98883.t1 AT2G24800 36.434 258 150 3 13 261 77 329 2.27e-47 160
MS.gene98883.t1 AT4G21960 34.661 251 160 3 14 261 78 327 9.81e-47 159
MS.gene98883.t1 AT3G49960 36.154 260 152 6 13 261 73 329 9.91e-46 156
MS.gene98883.t1 AT1G24110 35.019 257 157 4 13 261 68 322 1.68e-45 155
MS.gene98883.t1 AT2G37130 35.827 254 154 5 14 261 46 296 1.64e-44 152
MS.gene98883.t1 AT2G37130 35.827 254 154 5 14 261 77 327 3.58e-44 152
MS.gene98883.t1 AT2G39040 39.080 261 145 7 13 261 92 350 2.36e-43 150
MS.gene98883.t1 AT4G37530 40.376 213 105 5 13 210 73 278 3.67e-42 145
MS.gene98883.t1 AT5G22410 36.680 259 143 10 13 259 74 323 8.07e-41 143
MS.gene98883.t1 AT3G17070 30.116 259 172 4 11 261 19 276 9.33e-34 123
MS.gene98883.t1 AT3G17070 29.961 257 171 4 13 261 84 339 2.81e-32 121
MS.gene98883.t1 AT5G39580 41.317 167 89 4 13 179 71 228 5.04e-31 115
MS.gene98883.t1 AT4G25980 41.803 122 67 3 13 134 117 234 5.89e-25 100
MS.gene98883.t1 AT2G24800 42.500 120 65 1 13 132 77 192 3.65e-24 97.8
MS.gene98883.t1 AT4G32320 28.750 240 110 6 16 240 126 319 1.15e-13 70.1
MS.gene98883.t1 AT3G42570 37.363 91 56 1 43 132 57 147 2.20e-13 66.2
MS.gene98883.t1 AT4G08390 27.317 205 120 6 48 243 176 360 2.85e-12 66.2
MS.gene98883.t1 AT4G08390 27.317 205 120 6 48 243 176 360 2.85e-12 66.2
MS.gene98883.t1 AT4G08390 27.317 205 120 6 48 243 176 360 2.85e-12 66.2
MS.gene98883.t1 AT4G08390 27.317 205 120 6 48 243 175 359 2.92e-12 66.2

Find 75 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGTTCCGGGGACAATAATT+TGG 0.300472 5.2:+71756135 MS.gene98883:CDS
GAGAGATAAGAAAGAATTGC+AGG 0.319158 5.2:+71756377 MS.gene98883:CDS
TGGACTTTCCACCAAGGATT+TGG 0.319515 5.2:+71754831 MS.gene98883:CDS
TTGAGGCTTGAAGTGGGTGC+TGG 0.334026 5.2:-71754781 None:intergenic
GATTCCATAGTGCATGAATA+TGG 0.337141 5.2:+71756271 MS.gene98883:CDS
CAAGTTTCACATCCCATGTT+GGG 0.349153 5.2:-71754708 None:intergenic
ATCTCAAGGTTTAATGCTCT+TGG 0.358777 5.2:+71754811 MS.gene98883:CDS
TTTGCTCGCACAAGGCAATC+AGG 0.386172 5.2:+71756097 MS.gene98883:CDS
GTCCCAAGACATCAGGTTCC+GGG 0.396617 5.2:+71756122 MS.gene98883:CDS
AAGGATTTGGTCGCATTGTC+TGG 0.403525 5.2:+71754844 MS.gene98883:CDS
TGCCAATCCCAACAGAAATT+CGG 0.407832 5.2:+71754341 MS.gene98883:CDS
TGTCCCAAGACATCAGGTTC+CGG 0.410509 5.2:+71756121 MS.gene98883:CDS
CAAGCCATATTCATGCACTA+TGG 0.414528 5.2:-71756275 None:intergenic
GTCCCCGGAACCTGATGTCT+TGG 0.417118 5.2:-71756125 None:intergenic
AAACTAGGTGGTCACACAAT+TGG 0.431483 5.2:+71756013 MS.gene98883:intron
TCTTATCTCTCCATTTGAAC+CGG 0.435627 5.2:-71756365 None:intergenic
CCACGGGCCGAATTTCTGTT+GGG 0.448742 5.2:-71754348 None:intergenic
CCAAGTTTCACATCCCATGT+TGG 0.448886 5.2:-71754709 None:intergenic
TGAGGCTTGAAGTGGGTGCT+GGG 0.458400 5.2:-71754780 None:intergenic
GGCCGAATTTCTGTTGGGAT+TGG 0.459419 5.2:-71754343 None:intergenic
CAAGAACCTAGTTGACAGTA+AGG 0.460120 5.2:+71756204 MS.gene98883:CDS
AGTCCCCTCACCGGTTCAAA+TGG 0.471090 5.2:+71756355 MS.gene98883:CDS
CATTAAACCTTGAGATGAGT+TGG 0.479053 5.2:-71754804 None:intergenic
CTCTCCATTTGAACCGGTGA+GGG 0.479821 5.2:-71756359 None:intergenic
GCTTAAATTTCCCAGCTTGG+AGG 0.480636 5.2:+71754685 MS.gene98883:intron
ATCCACCATTGAAGAGTTGT+TGG 0.491131 5.2:-71756243 None:intergenic
CCAACATGGGATGTGAAACT+TGG 0.494973 5.2:+71754709 MS.gene98883:CDS
TCCCCGGAACCTGATGTCTT+GGG 0.501149 5.2:-71756124 None:intergenic
TCCGACCAACAACTCTTCAA+TGG 0.503794 5.2:+71756238 MS.gene98883:CDS
TCAGGGTGTCCCAAGACATC+AGG 0.506220 5.2:+71756115 MS.gene98883:CDS
TCCACGGGCCGAATTTCTGT+TGG 0.507509 5.2:-71754349 None:intergenic
ACCTTGAGATGAGTTGGTTG+AGG 0.512766 5.2:-71754798 None:intergenic
CCCAGCTTGGAGGCCCAACA+TGG 0.520178 5.2:+71754695 MS.gene98883:intron
AATGTCTCCCATCTTGATCA+TGG 0.525103 5.2:-71756332 None:intergenic
AGCAAAAGAAGTATCTATGT+TGG 0.528285 5.2:-71756080 None:intergenic
GTCGATCACTTCGAATCCAC+GGG 0.532124 5.2:-71754364 None:intergenic
AGACAATGCGACCAAATCCT+TGG 0.535960 5.2:-71754842 None:intergenic
GATGACACATCAAGCTTCAC+CGG 0.536161 5.2:+71754309 MS.gene98883:CDS
TGAAGAGTTGTTGGTCGGAG+TGG 0.547022 5.2:-71756234 None:intergenic
CTTGAAATAGTGATTGTCAA+AGG 0.547197 5.2:-71756185 None:intergenic
CGTCACCGCCATGATCAAGA+TGG 0.548522 5.2:+71756324 MS.gene98883:CDS
TTGCTCGCACAAGGCAATCA+GGG 0.555042 5.2:+71756098 MS.gene98883:CDS
ATAACATTGCAGGGATGTGA+TGG 0.563333 5.2:+71754273 MS.gene98883:intron
AACAGAGTCTCTAGCAGTGA+TGG 0.565223 5.2:-71754448 None:intergenic
CAATGCGACCAAATCCTTGG+TGG 0.568698 5.2:-71754839 None:intergenic
GCCTCAACCAACTCATCTCA+AGG 0.573068 5.2:+71754797 MS.gene98883:CDS
TGTCGATCACTTCGAATCCA+CGG 0.573405 5.2:-71754365 None:intergenic
AGGTGCCAAATTATTGTCCC+CGG 0.573503 5.2:-71756140 None:intergenic
ACCATTGAAGAGTTGTTGGT+CGG 0.577335 5.2:-71756239 None:intergenic
TTCATGCACTATGGAATCAG+TGG 0.582013 5.2:-71756266 None:intergenic
CCCAACAGAAATTCGGCCCG+TGG 0.584922 5.2:+71754348 MS.gene98883:CDS
GAGTTGGTTGAGGCTTGAAG+TGG 0.587942 5.2:-71754788 None:intergenic
GTCACCGCCATGATCAAGAT+GGG 0.592934 5.2:+71756325 MS.gene98883:CDS
TAGTGATTGTCAAAGGATGT+TGG 0.601893 5.2:-71756178 None:intergenic
GCAGTGGAGAAAGTATGTCC+AGG 0.603574 5.2:+71754399 MS.gene98883:CDS
TCAGCACATGAAACTGCACC+TGG 0.605024 5.2:-71754417 None:intergenic
GTAGTCCCTTACTGTCAACT+AGG 0.605278 5.2:-71756210 None:intergenic
GACCAACAACTCTTCAATGG+TGG 0.606439 5.2:+71756241 MS.gene98883:CDS
CCAGCTTGGAGGCCCAACAT+GGG 0.607919 5.2:+71754696 MS.gene98883:intron
GTCACACAATTGGACAAGCA+AGG 0.609025 5.2:+71756023 MS.gene98883:CDS
CGACAAAATCAAATCAGCAG+TGG 0.609985 5.2:+71754383 MS.gene98883:CDS
AGTCTCTAGCAGTGATGGCG+AGG 0.612615 5.2:-71754443 None:intergenic
AGTAAATCAGCTGCAAACAA+TGG 0.614802 5.2:+71754754 MS.gene98883:CDS
AGTTGGTTGAGGCTTGAAGT+GGG 0.615516 5.2:-71754787 None:intergenic
TGTTGGAGTCGTTGTAAATG+TGG 0.616544 5.2:-71756063 None:intergenic
AAGAACCTAGTTGACAGTAA+GGG 0.623353 5.2:+71756205 MS.gene98883:CDS
TCTCTCCATTTGAACCGGTG+AGG 0.624609 5.2:-71756360 None:intergenic
GGAGACATTAGTCCCCTCAC+CGG 0.627716 5.2:+71756346 MS.gene98883:CDS
TCCCAAGACATCAGGTTCCG+GGG 0.637903 5.2:+71756123 MS.gene98883:CDS
TCTCCATTTGAACCGGTGAG+GGG 0.638254 5.2:-71756358 None:intergenic
AAAAGCAAGTAACATCGAAG+AGG 0.639497 5.2:-71754153 None:intergenic
TGCTCTTGGACTTTCCACCA+AGG 0.642254 5.2:+71754825 MS.gene98883:CDS
GTTGGTGTTGCAAGATCAAG+AGG 0.648180 5.2:-71756160 None:intergenic
CATGGCGGTGACGAAATCAG+AGG 0.705431 5.2:-71756314 None:intergenic
GTCTCCCATCTTGATCATGG+CGG 0.710146 5.2:-71756329 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAATCTTATAAAAATT+AGG + chr5.2:71755062-71755081 MS.gene98883:intron 10.0%
!! TTCAAATCTTATAAAAATTA+GGG + chr5.2:71755063-71755082 MS.gene98883:intron 10.0%
!!! AAAAAATTCTAATTTTTTTC+AGG - chr5.2:71755271-71755290 None:intergenic 10.0%
!!! TATAATATTATGAATTTTTC+TGG + chr5.2:71755395-71755414 MS.gene98883:intron 10.0%
!! GAAAAATTGACATATTTATA+AGG + chr5.2:71755539-71755558 MS.gene98883:intron 15.0%
!! TAAAAAATTAATGTGATCAT+AGG + chr5.2:71754179-71754198 MS.gene98883:intron 15.0%
!! TGAATATTGAAAAGTTTATA+GGG + chr5.2:71755479-71755498 MS.gene98883:intron 15.0%
!!! ACATAAATTAAGTTGAAAAT+GGG - chr5.2:71755198-71755217 None:intergenic 15.0%
!!! ATAAAATGTTCAATTTGTTT+TGG - chr5.2:71755643-71755662 None:intergenic 15.0%
!!! ATTTTTAATATAACATTGCA+GGG + chr5.2:71754264-71754283 MS.gene98883:intron 15.0%
!!! GATACATTTCATAATTTTTA+GGG - chr5.2:71755582-71755601 None:intergenic 15.0%
!!! TACATAAATTAAGTTGAAAA+TGG - chr5.2:71755199-71755218 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr5.2:71755166-71755185 None:intergenic 15.0%
!!! TATTTTTAATATAACATTGC+AGG + chr5.2:71754263-71754282 MS.gene98883:intron 15.0%
!!! TGATACATTTCATAATTTTT+AGG - chr5.2:71755583-71755602 None:intergenic 15.0%
!!! TTTATTCTCTAAAATGTATA+GGG - chr5.2:71754555-71754574 None:intergenic 15.0%
!!! TTTTAAATGATACTTAAACT+AGG + chr5.2:71755998-71756017 MS.gene98883:intron 15.0%
!! AATAGAATAGATGTATATGT+GGG - chr5.2:71754890-71754909 None:intergenic 20.0%
!! GAAAAGTTGACATATTTATA+GGG - chr5.2:71755106-71755125 None:intergenic 20.0%
!! GTGAATATTGAAAAGTTTAT+AGG + chr5.2:71755478-71755497 MS.gene98883:intron 20.0%
!! TTTATATTTGTATTCACTCA+CGG - chr5.2:71754635-71754654 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr5.2:71755170-71755189 MS.gene98883:intron 20.0%
!!! AACTTTTCAATATTCACTTT+TGG - chr5.2:71755475-71755494 None:intergenic 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + chr5.2:71755447-71755466 MS.gene98883:intron 20.0%
!!! CATAAATTAAGTTGAAAATG+GGG - chr5.2:71755197-71755216 None:intergenic 20.0%
!!! CTATTGATTAAGTCAATAAT+TGG + chr5.2:71754905-71754924 MS.gene98883:intron 20.0%
!!! CTTTATTCTCTAAAATGTAT+AGG - chr5.2:71754556-71754575 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr5.2:71755167-71755186 None:intergenic 20.0%
!!! TAAAATTTTCCTTCAACTTT+TGG + chr5.2:71755139-71755158 MS.gene98883:intron 20.0%
!!! TACTTTTTCATTGATTGATA+GGG + chr5.2:71755906-71755925 MS.gene98883:intron 20.0%
!!! TAGTATTAGATCACTTATTT+TGG + chr5.2:71755717-71755736 MS.gene98883:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + chr5.2:71755448-71755467 MS.gene98883:intron 20.0%
!!! TGATTATTATGATGCAATTT+TGG - chr5.2:71754491-71754510 None:intergenic 20.0%
!!! TTACTTTTTCATTGATTGAT+AGG + chr5.2:71755905-71755924 MS.gene98883:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr5.2:71755566-71755585 None:intergenic 20.0%
! AAAAAATGAATCATAAAGGG+TGG - chr5.2:71755962-71755981 None:intergenic 25.0%
! AATCGTCATTTATATTGAGA+CGG - chr5.2:71755045-71755064 None:intergenic 25.0%
! AATTAATGTGATCATAGGAT+TGG + chr5.2:71754184-71754203 MS.gene98883:intron 25.0%
! ATAAAAAAAATCCGCTGAAA+TGG - chr5.2:71755878-71755897 None:intergenic 25.0%
! CAATAGAATAGATGTATATG+TGG - chr5.2:71754891-71754910 None:intergenic 25.0%
! CCCAAAAAATGAATCATAAA+GGG - chr5.2:71755965-71755984 None:intergenic 25.0%
! CGAAAAGTTGACATATTTAT+AGG - chr5.2:71755107-71755126 None:intergenic 25.0%
! TAAATGATACTTAAACTAGG+TGG + chr5.2:71756001-71756020 MS.gene98883:intron 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr5.2:71755507-71755526 MS.gene98883:intron 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr5.2:71755526-71755507 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr5.2:71755508-71755527 MS.gene98883:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr5.2:71755527-71755508 None:intergenic 25.0%
!! TTATTATGATGCAATTTTGG+TGG - chr5.2:71754488-71754507 None:intergenic 25.0%
!!! ACCCTTTATGATTCATTTTT+TGG + chr5.2:71755961-71755980 MS.gene98883:intron 25.0%
!!! CCCTTTATGATTCATTTTTT+GGG + chr5.2:71755962-71755981 MS.gene98883:intron 25.0%
!!! CCTTTATGATTCATTTTTTG+GGG + chr5.2:71755963-71755982 MS.gene98883:intron 25.0%
AAAACTACTAGTAATGAGCA+TGG + chr5.2:71755001-71755020 MS.gene98883:intron 30.0%
CCCCAAAAAATGAATCATAA+AGG - chr5.2:71755966-71755985 None:intergenic 30.0%
CTTGAAATAGTGATTGTCAA+AGG - chr5.2:71756188-71756207 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr5.2:71755494-71755513 MS.gene98883:intron 30.0%
!! AGCAAAAGAAGTATCTATGT+TGG - chr5.2:71756083-71756102 None:intergenic 30.0%
AAAAAAATCCGCTGAAATGG+TGG - chr5.2:71755875-71755894 None:intergenic 35.0%
AAAAGCAAGTAACATCGAAG+AGG - chr5.2:71754156-71754175 None:intergenic 35.0%
AAAATTGACCACCATTTCAG+CGG + chr5.2:71755864-71755883 MS.gene98883:intron 35.0%
AAATCAGAGGAAAAAGAGCT+TGG - chr5.2:71756304-71756323 None:intergenic 35.0%
AAGAACCTAGTTGACAGTAA+GGG + chr5.2:71756205-71756224 MS.gene98883:CDS 35.0%
AGTAAATCAGCTGCAAACAA+TGG + chr5.2:71754754-71754773 MS.gene98883:CDS 35.0%
ATCTCAAGGTTTAATGCTCT+TGG + chr5.2:71754811-71754830 MS.gene98883:CDS 35.0%
CATTAAACCTTGAGATGAGT+TGG - chr5.2:71754807-71754826 None:intergenic 35.0%
GAGAGATAAGAAAGAATTGC+AGG + chr5.2:71756377-71756396 MS.gene98883:CDS 35.0%
GATTCCATAGTGCATGAATA+TGG + chr5.2:71756271-71756290 MS.gene98883:CDS 35.0%
TAGTGATTGTCAAAGGATGT+TGG - chr5.2:71756181-71756200 None:intergenic 35.0%
TATGCTTAAATTTCCCAGCT+TGG + chr5.2:71754682-71754701 MS.gene98883:intron 35.0%
TCTTATCTCTCCATTTGAAC+CGG - chr5.2:71756368-71756387 None:intergenic 35.0%
TTATAGGGACCAAAAGTTGA+AGG - chr5.2:71755151-71755170 None:intergenic 35.0%
! GAGAGAGAAATTGATGACAT+GGG + chr5.2:71754976-71754995 MS.gene98883:intron 35.0%
AAACTAGGTGGTCACACAAT+TGG + chr5.2:71756013-71756032 MS.gene98883:intron 40.0%
AATGTCTCCCATCTTGATCA+TGG - chr5.2:71756335-71756354 None:intergenic 40.0%
ACCATTGAAGAGTTGTTGGT+CGG - chr5.2:71756242-71756261 None:intergenic 40.0%
ATAACATTGCAGGGATGTGA+TGG + chr5.2:71754273-71754292 MS.gene98883:intron 40.0%
ATCCACCATTGAAGAGTTGT+TGG - chr5.2:71756246-71756265 None:intergenic 40.0%
CAAGAACCTAGTTGACAGTA+AGG + chr5.2:71756204-71756223 MS.gene98883:CDS 40.0%
CAAGCCATATTCATGCACTA+TGG - chr5.2:71756278-71756297 None:intergenic 40.0%
CAAGTTTCACATCCCATGTT+GGG - chr5.2:71754711-71754730 None:intergenic 40.0%
CGACAAAATCAAATCAGCAG+TGG + chr5.2:71754383-71754402 MS.gene98883:CDS 40.0%
TGCCAATCCCAACAGAAATT+CGG + chr5.2:71754341-71754360 MS.gene98883:CDS 40.0%
TGTTGGAGTCGTTGTAAATG+TGG - chr5.2:71756066-71756085 None:intergenic 40.0%
TTCATGCACTATGGAATCAG+TGG - chr5.2:71756269-71756288 None:intergenic 40.0%
! ATACTTCTTTTGCTCGCACA+AGG + chr5.2:71756089-71756108 MS.gene98883:CDS 40.0%
! CGAGAGAGAAATTGATGACA+TGG + chr5.2:71754975-71754994 MS.gene98883:intron 40.0%
AACAGAGTCTCTAGCAGTGA+TGG - chr5.2:71754451-71754470 None:intergenic 45.0%
AGACAATGCGACCAAATCCT+TGG - chr5.2:71754845-71754864 None:intergenic 45.0%
AGGTGCCAAATTATTGTCCC+CGG - chr5.2:71756143-71756162 None:intergenic 45.0%
AGGTTCCGGGGACAATAATT+TGG + chr5.2:71756135-71756154 MS.gene98883:CDS 45.0%
AGTTGGTTGAGGCTTGAAGT+GGG - chr5.2:71754790-71754809 None:intergenic 45.0%
CCAACATGGGATGTGAAACT+TGG + chr5.2:71754709-71754728 MS.gene98883:CDS 45.0%
CCAAGTTTCACATCCCATGT+TGG - chr5.2:71754712-71754731 None:intergenic 45.0%
GACCAACAACTCTTCAATGG+TGG + chr5.2:71756241-71756260 MS.gene98883:CDS 45.0%
GATGACACATCAAGCTTCAC+CGG + chr5.2:71754309-71754328 MS.gene98883:CDS 45.0%
GCTTAAATTTCCCAGCTTGG+AGG + chr5.2:71754685-71754704 MS.gene98883:intron 45.0%
GTAGTCCCTTACTGTCAACT+AGG - chr5.2:71756213-71756232 None:intergenic 45.0%
GTCACACAATTGGACAAGCA+AGG + chr5.2:71756023-71756042 MS.gene98883:CDS 45.0%
TCCGACCAACAACTCTTCAA+TGG + chr5.2:71756238-71756257 MS.gene98883:CDS 45.0%
TGGACTTTCCACCAAGGATT+TGG + chr5.2:71754831-71754850 MS.gene98883:CDS 45.0%
TGTCGATCACTTCGAATCCA+CGG - chr5.2:71754368-71754387 None:intergenic 45.0%
! AAGGATTTGGTCGCATTGTC+TGG + chr5.2:71754844-71754863 MS.gene98883:CDS 45.0%
!! ACCTTGAGATGAGTTGGTTG+AGG - chr5.2:71754801-71754820 None:intergenic 45.0%
!! GTTGGTGTTGCAAGATCAAG+AGG - chr5.2:71756163-71756182 None:intergenic 45.0%
!!! ATGAATTTTTATATTTTTTA+CGG - chr5.2:71755325-71755344 None:intergenic 5.0%
CAATGCGACCAAATCCTTGG+TGG - chr5.2:71754842-71754861 None:intergenic 50.0%
CTCTCCATTTGAACCGGTGA+GGG - chr5.2:71756362-71756381 None:intergenic 50.0%
GCCTCAACCAACTCATCTCA+AGG + chr5.2:71754797-71754816 MS.gene98883:CDS 50.0%
GGCCGAATTTCTGTTGGGAT+TGG - chr5.2:71754346-71754365 None:intergenic 50.0%
GTCACCGCCATGATCAAGAT+GGG + chr5.2:71756325-71756344 MS.gene98883:CDS 50.0%
GTCGATCACTTCGAATCCAC+GGG - chr5.2:71754367-71754386 None:intergenic 50.0%
GTCTCCCATCTTGATCATGG+CGG - chr5.2:71756332-71756351 None:intergenic 50.0%
TCAGCACATGAAACTGCACC+TGG - chr5.2:71754420-71754439 None:intergenic 50.0%
TCTCCATTTGAACCGGTGAG+GGG - chr5.2:71756361-71756380 None:intergenic 50.0%
TCTCTCCATTTGAACCGGTG+AGG - chr5.2:71756363-71756382 None:intergenic 50.0%
TGAAGAGTTGTTGGTCGGAG+TGG - chr5.2:71756237-71756256 None:intergenic 50.0%
TGCTCTTGGACTTTCCACCA+AGG + chr5.2:71754825-71754844 MS.gene98883:CDS 50.0%
TGTCCCAAGACATCAGGTTC+CGG + chr5.2:71756121-71756140 MS.gene98883:CDS 50.0%
TTGCTCGCACAAGGCAATCA+GGG + chr5.2:71756098-71756117 MS.gene98883:CDS 50.0%
TTTGCTCGCACAAGGCAATC+AGG + chr5.2:71756097-71756116 MS.gene98883:CDS 50.0%
! GAGTTGGTTGAGGCTTGAAG+TGG - chr5.2:71754791-71754810 None:intergenic 50.0%
! GCAGTGGAGAAAGTATGTCC+AGG + chr5.2:71754399-71754418 MS.gene98883:CDS 50.0%
!! GGGATTGGCAGTTTTCTCTC+CGG - chr5.2:71754331-71754350 None:intergenic 50.0%
CATGGCGGTGACGAAATCAG+AGG - chr5.2:71756317-71756336 None:intergenic 55.0%
CCACGGGCCGAATTTCTGTT+GGG - chr5.2:71754351-71754370 None:intergenic 55.0%
CGTCACCGCCATGATCAAGA+TGG + chr5.2:71756324-71756343 MS.gene98883:CDS 55.0%
GGAGACATTAGTCCCCTCAC+CGG + chr5.2:71756346-71756365 MS.gene98883:CDS 55.0%
GTCCCAAGACATCAGGTTCC+GGG + chr5.2:71756122-71756141 MS.gene98883:CDS 55.0%
TCCACGGGCCGAATTTCTGT+TGG - chr5.2:71754352-71754371 None:intergenic 55.0%
TCCCAAGACATCAGGTTCCG+GGG + chr5.2:71756123-71756142 MS.gene98883:CDS 55.0%
TCCCCGGAACCTGATGTCTT+GGG - chr5.2:71756127-71756146 None:intergenic 55.0%
TGAGGCTTGAAGTGGGTGCT+GGG - chr5.2:71754783-71754802 None:intergenic 55.0%
TTGAGGCTTGAAGTGGGTGC+TGG - chr5.2:71754784-71754803 None:intergenic 55.0%
! AGTCTCTAGCAGTGATGGCG+AGG - chr5.2:71754446-71754465 None:intergenic 55.0%
! TCAGGGTGTCCCAAGACATC+AGG + chr5.2:71756115-71756134 MS.gene98883:CDS 55.0%
!! AGTCCCCTCACCGGTTCAAA+TGG + chr5.2:71756355-71756374 MS.gene98883:CDS 55.0%
CCAGCTTGGAGGCCCAACAT+GGG + chr5.2:71754696-71754715 MS.gene98883:intron 60.0%
CCATGTTGGGCCTCCAAGCT+GGG - chr5.2:71754698-71754717 None:intergenic 60.0%
CCCAACAGAAATTCGGCCCG+TGG + chr5.2:71754348-71754367 MS.gene98883:CDS 60.0%
GTCCCCGGAACCTGATGTCT+TGG - chr5.2:71756128-71756147 None:intergenic 60.0%
CCCAGCTTGGAGGCCCAACA+TGG + chr5.2:71754695-71754714 MS.gene98883:intron 65.0%
CCCATGTTGGGCCTCCAAGC+TGG - chr5.2:71754699-71754718 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 71754140 71756411 71754140 ID=MS.gene98883
chr5.2 mRNA 71754140 71756411 71754140 ID=MS.gene98883.t1;Parent=MS.gene98883
chr5.2 exon 71754140 71754162 71754140 ID=MS.gene98883.t1.exon1;Parent=MS.gene98883.t1
chr5.2 CDS 71754140 71754162 71754140 ID=cds.MS.gene98883.t1;Parent=MS.gene98883.t1
chr5.2 exon 71754201 71754213 71754201 ID=MS.gene98883.t1.exon2;Parent=MS.gene98883.t1
chr5.2 CDS 71754201 71754213 71754201 ID=cds.MS.gene98883.t1;Parent=MS.gene98883.t1
chr5.2 exon 71754285 71754476 71754285 ID=MS.gene98883.t1.exon3;Parent=MS.gene98883.t1
chr5.2 CDS 71754285 71754476 71754285 ID=cds.MS.gene98883.t1;Parent=MS.gene98883.t1
chr5.2 exon 71754700 71754865 71754700 ID=MS.gene98883.t1.exon4;Parent=MS.gene98883.t1
chr5.2 CDS 71754700 71754865 71754700 ID=cds.MS.gene98883.t1;Parent=MS.gene98883.t1
chr5.2 exon 71756020 71756411 71756020 ID=MS.gene98883.t1.exon5;Parent=MS.gene98883.t1
chr5.2 CDS 71756020 71756411 71756020 ID=cds.MS.gene98883.t1;Parent=MS.gene98883.t1
Gene Sequence

>MS.gene98883

ATGAATAATCTAACCTCTTCGATGTTACTTGCTTTTGCTTAAAAAATTAATGTGATCATAGGATTGGATATTGTGTACAACTCTTTTTCTTTAGATACAAATTAAATTATAAAAAAATATGAATATTTTTAATATAACATTGCAGGGATGTGATGGTTCAATTCTTCTCGATGACACATCAAGCTTCACCGGAGAGAAAACTGCCAATCCCAACAGAAATTCGGCCCGTGGATTCGAAGTGATCGACAAAATCAAATCAGCAGTGGAGAAAGTATGTCCAGGTGCAGTTTCATGTGCTGATATCCTCGCCATCACTGCTAGAGACTCTGTTGAGATCGTAAGTATCCACCAAAATTGCATCATAATAATCATATTAAACAAAAACATAAAATTTGATCAAATTTTAATATTTCCCTATACATTTTAGAGAATAAAGTTATTAAAATCTCAATATAATATCTAATTGAACGATCAGTGTAAAACTGTTTTACACCGTGAGTGAATACAAATATAAATATATTGTATAAATTATGCTAATTGATTATGCTTAAATTTCCCAGCTTGGAGGCCCAACATGGGATGTGAAACTTGGAAGAAGAGATGCTAGAACAGCTAGTAAATCAGCTGCAAACAATGGCATCCCAGCACCCACTTCAAGCCTCAACCAACTCATCTCAAGGTTTAATGCTCTTGGACTTTCCACCAAGGATTTGGTCGCATTGTCTGGTATGTTACATTCATTATAATCCCACATATACATCTATTCTATTGATTAAGTCAATAATTGGTCGCATATTTTTCATATATAGATAGATTAATATATAAATACTATATGCGAGAGAGAAATTGATGACATGGGTGAAAACTACTAGTAATGAGCATGGTTTTAATAATTACTTCATCCGTCTCAATATAAATGACGATTCAAATCTTATAAAAATTAGGGTTAAATATATTTTTGATCCCTATAAATATGTCAACTTTTCGTTTTAGTCCCTCTAAAATTTTCCTTCAACTTTTGGTCCCTATAAAATTTTCAATCACTACTTTTGGTCCCCATTTTCAACTTAATTTATGTATTTTTTAATGAAATTCTGCAGAAATGTGTAAAATATTCTAAAACGATTTCCTGAAAAAAATTAGAATTTTTTAACAAAACACAAATTAAATATGAATTTTTAACCGTAAAAAATATAAAAATTCATATTAAATTCATGTTTTGTTAAAAAATTCTAAATTTTTTTTGAGTGATTCTTATAATATTATGAATTTTTCTGGAAAATTTTATTAAAAAATATGAATTCTACATATGAGTTTACTTTAAAAGAGGGACCAAAAGTGAATATTGAAAAGTTTATAGGGACTAAAAGTTGAAGGAAAATTTTAGAGGGACTAAAACGAAAAATTGACATATTTATAAGGACCAAAAACATATTTAACCCTAAAAATTATGAAATGTATCAGTAAAAATTATTAAAATTTAACATTTTAAAAAAAATTCCAAAACAAATTGAACATTTTATATGCTACAATTAATCTTTAAATAATAAAAGAAAAATATAGTTATGTTATATGAATAGTATTAGATCACTTATTTTGGAACACAGAGTATTTTATAATTGTTTCATAAAAGATCTAAACTTTGTGCTCTGAAGTTTTTAAAGAATGTCATACAGTACGAATTATTTTTTCTACTAACATTTTTTTACTTTATTTAATTTTATAAAATTGACCACCATTTCAGCGGATTTTTTTTATTCAAAACTTACTTTTTCATTGATTGATAGGGTTTAAATTGTCAACAATAATTTATTTTATTCCACCCTTTATGATTCATTTTTTGGGGTAAATCTTGATTTTTTAAATGATACTTAAACTAGGTGGTCACACAATTGGACAAGCAAGGTGCACTTCATTTAGAGACCACATTTACAACGACTCCAACATAGATACTTCTTTTGCTCGCACAAGGCAATCAGGGTGTCCCAAGACATCAGGTTCCGGGGACAATAATTTGGCACCTCTTGATCTTGCAACACCAACATCCTTTGACAATCACTATTTCAAGAACCTAGTTGACAGTAAGGGACTACTCCACTCCGACCAACAACTCTTCAATGGTGGATCCACTGATTCCATAGTGCATGAATATGGCTTGTATCCAAGCTCTTTTTCCTCTGATTTCGTCACCGCCATGATCAAGATGGGAGACATTAGTCCCCTCACCGGTTCAAATGGAGAGATAAGAAAGAATTGCAGGAGTGTGAATTAA
Protein sequence

>MS.gene98883.t1

MNNLTSSMIGYCGCDGSILLDDTSSFTGEKTANPNRNSARGFEVIDKIKSAVEKVCPGAVSCADILAITARDSVEILGGPTWDVKLGRRDARTASKSAANNGIPAPTSSLNQLISRFNALGLSTKDLVALSGGHTIGQARCTSFRDHIYNDSNIDTSFARTRQSGCPKTSGSGDNNLAPLDLATPTSFDNHYFKNLVDSKGLLHSDQQLFNGGSTDSIVHEYGLYPSSFSSDFVTAMIKMGDISPLTGSNGEIRKNCRSVN