Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99081.t1 | XP_027912700.1 | 94.9 | 610 | 25 | 3 | 1 | 605 | 140 | 748 | 0.00E+00 | 1141.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99081.t1 | Q04716 | 88.0 | 482 | 53 | 2 | 1 | 477 | 59 | 540 | 3.3e-237 | 822.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99081.t1 | A0A385G296 | 93.4 | 618 | 28 | 3 | 1 | 605 | 32 | 649 | 0.0e+00 | 1140.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene99081 | -0.812221 | 4.73E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene99081 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene99081 | -0.811564 | 6.57E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene99081 | -0.817206 | 3.72E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene99081 | -0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene050562 | MS.gene99081 | -0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene99081 | 0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene053006 | MS.gene99081 | -0.805983 | 1.03E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene99081 | -0.830286 | 3.20E-55 | -1.69E-46 |
| MS.gene055230 | MS.gene99081 | -0.815223 | 1.03E-51 | -1.69E-46 |
| MS.gene055841 | MS.gene99081 | -0.841656 | 4.16E-58 | -1.69E-46 |
| MS.gene057208 | MS.gene99081 | -0.822998 | 1.76E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATATAGTAAAAAAAAAAA+GGG | + | 6910:8416-8435 | MS.gene99081:intron | 10.0% |
| !! | TTCATATAGTAAAAAAAAAA+AGG | + | 6910:8415-8434 | MS.gene99081:intron | 10.0% |
| !! | AAATTTAGTAAATATCGTAA+AGG | + | 6910:8462-8481 | MS.gene99081:intron | 15.0% |
| !! | ATAGATAAATTAATAGACCT+AGG | + | 6910:7927-7946 | MS.gene99081:CDS | 20.0% |
| !! | ATTCCATTAGTAATGAAAAA+AGG | + | 6910:8221-8240 | MS.gene99081:CDS | 20.0% |
| !! | TTCCATTAGTAATGAAAAAA+GGG | + | 6910:8222-8241 | MS.gene99081:CDS | 20.0% |
| !!! | AAATGAATGAATGTTCTTTT+GGG | - | 6910:6991-7010 | MS.gene99081:intergenic | 20.0% |
| !!! | TTATAAGAACCTTTTTTTTG+AGG | + | 6910:7827-7846 | MS.gene99081:CDS | 20.0% |
| ! | AGAATCTTTCTAAATCACTT+CGG | + | 6910:7289-7308 | MS.gene99081:CDS | 25.0% |
| ! | ATAAATTAATAGACCTAGGT+AGG | + | 6910:7931-7950 | MS.gene99081:CDS | 25.0% |
| ! | CTTCACTATTCTACTAAAAA+TGG | - | 6910:8198-8217 | MS.gene99081:intergenic | 25.0% |
| ! | TCCATTAGTAATGAAAAAAG+GGG | + | 6910:8223-8242 | MS.gene99081:CDS | 25.0% |
| ! | TTACTAAATTTCGTACGTTT+CGG | - | 6910:8453-8472 | MS.gene99081:intergenic | 25.0% |
| !! | GAAATGAATGAATGTTCTTT+TGG | - | 6910:6992-7011 | MS.gene99081:intergenic | 25.0% |
| !!! | AAAAAACTTCGTTTTTCTGA+AGG | - | 6910:7385-7404 | MS.gene99081:intergenic | 25.0% |
| !!! | CATTTTTAGTAGAATAGTGA+AGG | + | 6910:8196-8215 | MS.gene99081:CDS | 25.0% |
| AAACCTACAGAAGTAAGAAT+GGG | + | 6910:8696-8715 | MS.gene99081:CDS | 30.0% | |
| AGAAACAGAAAAATTCCGTA+CGG | + | 6910:8002-8021 | MS.gene99081:CDS | 30.0% | |
| AGCAAAACGAAATTAGGATT+TGG | + | 6910:7214-7233 | MS.gene99081:CDS | 30.0% | |
| ATTTGATCCTTAATTGACCT+AGG | - | 6910:7869-7888 | MS.gene99081:intergenic | 30.0% | |
| CACTAATACCTTAATTGAGT+CGG | + | 6910:8085-8104 | MS.gene99081:CDS | 30.0% | |
| CCGAAAAAATGGTAAGATAT+GGG | + | 6910:8641-8660 | MS.gene99081:CDS | 30.0% | |
| GAAAATAGATTATGCTTCTG+CGG | + | 6910:8349-8368 | MS.gene99081:CDS | 30.0% | |
| GAAAGATTCTTCTTTATCGA+TGG | - | 6910:7279-7298 | MS.gene99081:intergenic | 30.0% | |
| GAATCTTTCTAAATCACTTC+GGG | + | 6910:7290-7309 | MS.gene99081:CDS | 30.0% | |
| GTCAATTAAGGATCAAATGT+TGG | + | 6910:7871-7890 | MS.gene99081:CDS | 30.0% | |
| TCCGAAAAAATGGTAAGATA+TGG | + | 6910:8640-8659 | MS.gene99081:CDS | 30.0% | |
| TTCAACTGAGAAAGAAAACA+AGG | + | 6910:8162-8181 | MS.gene99081:CDS | 30.0% | |
| ! | CTTTTAAATAGATGACTCGT+CGG | - | 6910:7435-7454 | MS.gene99081:intergenic | 30.0% |
| ! | TTTTAAATAGATGACTCGTC+GGG | - | 6910:7434-7453 | MS.gene99081:intergenic | 30.0% |
| !! | CAGAAGCATAATCTATTTTC+TGG | - | 6910:8349-8368 | MS.gene99081:intergenic | 30.0% |
| !!! | AAACTTGGTTTTGGAAGATA+TGG | + | 6910:8519-8538 | MS.gene99081:CDS | 30.0% |
| !!! | ACCCCTTTTTTCATTACTAA+TGG | - | 6910:8227-8246 | MS.gene99081:intergenic | 30.0% |
| !!! | CCCATATCTTACCATTTTTT+CGG | - | 6910:8644-8663 | MS.gene99081:intergenic | 30.0% |
| AAAGAGATGTCTTGAGCAAT+CGG | - | 6910:8143-8162 | MS.gene99081:intergenic | 35.0% | |
| AAATAAGAGTTGTACCCGTA+CGG | - | 6910:8020-8039 | MS.gene99081:intergenic | 35.0% | |
| AAATGATTGAGAACTACGAC+GGG | - | 6910:7540-7559 | MS.gene99081:intergenic | 35.0% | |
| AAGAGGAAAAGGAAATCCTA+CGG | + | 6910:8719-8738 | MS.gene99081:CDS | 35.0% | |
| AGTAATGAAAAAAGGGGTTG+AGG | + | 6910:8229-8248 | MS.gene99081:CDS | 35.0% | |
| ATCAAATGTTGGAACCTCAT+GGG | + | 6910:7882-7901 | MS.gene99081:CDS | 35.0% | |
| ATCGACCTGAACAACATATA+CGG | - | 6910:8259-8278 | MS.gene99081:intergenic | 35.0% | |
| ATGACCGAATAATTCAAGGA+GGG | - | 6910:7477-7496 | MS.gene99081:intergenic | 35.0% | |
| CGACGAGTCATCTATTTAAA+AGG | + | 6910:7433-7452 | MS.gene99081:CDS | 35.0% | |
| GAAACAGAAAAATTCCGTAC+GGG | + | 6910:8003-8022 | MS.gene99081:CDS | 35.0% | |
| GAAACCTACAGAAGTAAGAA+TGG | + | 6910:8695-8714 | MS.gene99081:CDS | 35.0% | |
| GAAATAGCTAGAACTGAATG+CGG | + | 6910:8290-8309 | MS.gene99081:CDS | 35.0% | |
| GAAATGATTGAGAACTACGA+CGG | - | 6910:7541-7560 | MS.gene99081:intergenic | 35.0% | |
| GTAATGAAAAAAGGGGTTGA+GGG | + | 6910:8230-8249 | MS.gene99081:CDS | 35.0% | |
| TAATGAAAAAAGGGGTTGAG+GGG | + | 6910:8231-8250 | MS.gene99081:CDS | 35.0% | |
| TCTATCCCTTGGAAAGAAAA+AGG | - | 6910:7799-7818 | MS.gene99081:intergenic | 35.0% | |
| TCTTCTTTATCGATGGTGAT+CGG | - | 6910:7272-7291 | MS.gene99081:intergenic | 35.0% | |
| TTAATAGACCTAGGTAGGAT+AGG | + | 6910:7936-7955 | MS.gene99081:CDS | 35.0% | |
| TTGCATGACCGAATAATTCA+AGG | - | 6910:7481-7500 | MS.gene99081:intergenic | 35.0% | |
| ! | AGGAGTCGTAATTTTCTATC+AGG | - | 6910:7365-7384 | MS.gene99081:intergenic | 35.0% |
| ! | TAATTTCGTTTTGCTTCTCC+CGG | - | 6910:7209-7228 | MS.gene99081:intergenic | 35.0% |
| ! | TGCTACCTTTTTCTTTCCAA+GGG | + | 6910:7791-7810 | MS.gene99081:CDS | 35.0% |
| AAACCAGACGGAACAAAACT+TGG | + | 6910:8504-8523 | MS.gene99081:CDS | 40.0% | |
| AACCACTCCTAGGTCAATTA+AGG | + | 6910:7859-7878 | MS.gene99081:CDS | 40.0% | |
| AATGATTGAGAACTACGACG+GGG | - | 6910:7539-7558 | MS.gene99081:intergenic | 40.0% | |
| ACAGAAGTAAGAATGGGAAG+AGG | + | 6910:8702-8721 | MS.gene99081:CDS | 40.0% | |
| AGAAACTTGGTTGACGAACA+TGG | - | 6910:8843-8862 | MS.gene99081:intergenic | 40.0% | |
| AGAACTGAATGCGGAAAGTA+TGG | + | 6910:8299-8318 | MS.gene99081:CDS | 40.0% | |
| AGAGGAAAAGGAAATCCTAC+GGG | + | 6910:8720-8739 | MS.gene99081:CDS | 40.0% | |
| AGCGGACAATTCCGAAAAAA+TGG | + | 6910:8630-8649 | MS.gene99081:CDS | 40.0% | |
| AGGATAGGAGAGTGGATAAA+GGG | + | 6910:7951-7970 | MS.gene99081:CDS | 40.0% | |
| ATCCTTAATTGACCTAGGAG+TGG | - | 6910:7864-7883 | MS.gene99081:intergenic | 40.0% | |
| ATCGTAAAGGCAGATGTAGT+AGG | + | 6910:8475-8494 | MS.gene99081:intron | 40.0% | |
| ATCTCGCTCTTTCCTTTCTT+CGG | + | 6910:7768-7787 | MS.gene99081:CDS | 40.0% | |
| CATGACCGAATAATTCAAGG+AGG | - | 6910:7478-7497 | MS.gene99081:intergenic | 40.0% | |
| CATGGGTAAGGATAAGGTAA+TGG | + | 6910:7899-7918 | MS.gene99081:CDS | 40.0% | |
| CGTAGTTCTCAATCATTTCG+TGG | + | 6910:7542-7561 | MS.gene99081:CDS | 40.0% | |
| CTTCCCATTCTTACTTCTGT+AGG | - | 6910:8702-8721 | MS.gene99081:intergenic | 40.0% | |
| GATCAAATGTTGGAACCTCA+TGG | + | 6910:7881-7900 | MS.gene99081:CDS | 40.0% | |
| GGGAGAAGCAAAACGAAATT+AGG | + | 6910:7208-7227 | MS.gene99081:CDS | 40.0% | |
| GTAAGAATGGGAAGAGGAAA+AGG | + | 6910:8708-8727 | MS.gene99081:CDS | 40.0% | |
| TAAATCCCAACTCTATCCCT+TGG | - | 6910:7810-7829 | MS.gene99081:intergenic | 40.0% | |
| TAGGATAGGAGAGTGGATAA+AGG | + | 6910:7950-7969 | MS.gene99081:CDS | 40.0% | |
| TCACACCATCCATCTCAAAT+AGG | - | 6910:8776-8795 | MS.gene99081:intergenic | 40.0% | |
| TCGTAAAGGCAGATGTAGTA+GGG | + | 6910:8476-8495 | MS.gene99081:intron | 40.0% | |
| TCTTACTTCTGTAGGTTTCC+CGG | - | 6910:8694-8713 | MS.gene99081:intergenic | 40.0% | |
| TCTTTCCAAGGGATAGAGTT+GGG | + | 6910:7802-7821 | MS.gene99081:CDS | 40.0% | |
| TGACCGAATAATTCAAGGAG+GGG | - | 6910:7476-7495 | MS.gene99081:intergenic | 40.0% | |
| TTACCTTATCCTTACCCATG+AGG | - | 6910:7899-7918 | MS.gene99081:intergenic | 40.0% | |
| TTCTTCGTCTTTCTTGTTGC+TGG | - | 6910:7127-7146 | MS.gene99081:intergenic | 40.0% | |
| TTCTTTCCAAGGGATAGAGT+TGG | + | 6910:7801-7820 | MS.gene99081:CDS | 40.0% | |
| ! | AAAAAGGTAGCACCGAAGAA+AGG | - | 6910:7783-7802 | MS.gene99081:intergenic | 40.0% |
| ! | CAAGTCCTATTTGAGATGGA+TGG | + | 6910:8768-8787 | MS.gene99081:CDS | 40.0% |
| ! | CCATAGCGTTGCTTCTTTTT+CGG | - | 6910:7240-7259 | MS.gene99081:intergenic | 40.0% |
| ! | GACGGAACAAAACTTGGTTT+TGG | + | 6910:8510-8529 | MS.gene99081:CDS | 40.0% |
| ! | GATATGGGTAAGAGTTTTCG+CGG | + | 6910:8656-8675 | MS.gene99081:CDS | 40.0% |
| ! | GATCTTGACCGACTCAATTA+AGG | - | 6910:8096-8115 | MS.gene99081:intergenic | 40.0% |
| ! | GTGCTACCTTTTTCTTTCCA+AGG | + | 6910:7790-7809 | MS.gene99081:CDS | 40.0% |
| !!! | AAACCAAGTTTTGTTCCGTC+TGG | - | 6910:8510-8529 | MS.gene99081:intergenic | 40.0% |
| !!! | ACCTTTTTTTTGAGGATGCC+CGG | + | 6910:7835-7854 | MS.gene99081:CDS | 40.0% |
| ATGTTGGAACCTCATGGGTA+AGG | + | 6910:7887-7906 | MS.gene99081:CDS | 45.0% | |
| ATTCGCCAAGCGAATGAAGT+GGG | - | 6910:7715-7734 | MS.gene99081:intergenic | 45.0% | |
| CCGAAAAAGAAGCAACGCTA+TGG | + | 6910:7237-7256 | MS.gene99081:CDS | 45.0% | |
| CGTAAAGGCAGATGTAGTAG+GGG | + | 6910:8477-8496 | MS.gene99081:intron | 45.0% | |
| CGTCAACCAAGTTTCTTCAG+TGG | + | 6910:8847-8866 | MS.gene99081:CDS | 45.0% | |
| CTGTAGGTTTCCCGGTAATA+GGG | - | 6910:8686-8705 | MS.gene99081:intergenic | 45.0% | |
| GAAAAGGAAATCCTACGGGT+TGG | + | 6910:8724-8743 | MS.gene99081:CDS | 45.0% | |
| GAACCTCATGGGTAAGGATA+AGG | + | 6910:7893-7912 | MS.gene99081:CDS | 45.0% | |
| GAAGAAAGGAAAGAGCGAGA+TGG | - | 6910:7769-7788 | MS.gene99081:intergenic | 45.0% | |
| GAAGAACGAAACGAAGTGAG+AGG | + | 6910:7141-7160 | MS.gene99081:CDS | 45.0% | |
| GAATCTCAGGTGTCAAAGTG+TGG | + | 6910:8390-8409 | MS.gene99081:intron | 45.0% | |
| GGGACAAGTCCTATTTGAGA+TGG | + | 6910:8764-8783 | MS.gene99081:CDS | 45.0% | |
| GGGATCCGTATATGTTGTTC+AGG | + | 6910:8251-8270 | MS.gene99081:CDS | 45.0% | |
| TCTAAATCACTTCGGGTCAG+CGG | + | 6910:7297-7316 | MS.gene99081:CDS | 45.0% | |
| TCTACTCGTTACGGAATCTC+AGG | + | 6910:8377-8396 | MS.gene99081:CDS | 45.0% | |
| TCTGTAGGTTTCCCGGTAAT+AGG | - | 6910:8687-8706 | MS.gene99081:intergenic | 45.0% | |
| TGTTGTTCAGGTCGATCAGA+AGG | + | 6910:8263-8282 | MS.gene99081:CDS | 45.0% | |
| TTATCGATGGTGATCGGTCA+TGG | - | 6910:7266-7285 | MS.gene99081:intergenic | 45.0% | |
| TTCGCGGATATCCCTATTAC+CGG | + | 6910:8672-8691 | MS.gene99081:CDS | 45.0% | |
| TTTATGCGCCGCTAATGTAG+CGG | - | 6910:8820-8839 | MS.gene99081:intergenic | 45.0% | |
| ! | GAAGTGGGTCAACCTCTTTT+TGG | - | 6910:7700-7719 | MS.gene99081:intergenic | 45.0% |
| !! | GACCAGCGAGAAAAAGTGTT+TGG | + | 6910:7668-7687 | MS.gene99081:CDS | 45.0% |
| !! | GCGGAAGTATCTACTCGTTA+CGG | + | 6910:8368-8387 | MS.gene99081:CDS | 45.0% |
| !!! | CCTTTTTTTTGAGGATGCCC+GGG | + | 6910:7836-7855 | MS.gene99081:CDS | 45.0% |
| !!! | GGTCAACCTCTTTTTGGCTT+CGG | - | 6910:7694-7713 | MS.gene99081:intergenic | 45.0% |
| AACGAAACGAAGTGAGAGGC+CGG | + | 6910:7145-7164 | MS.gene99081:CDS | 50.0% | |
| ACCTAGGTAGGATAGGAGAG+TGG | + | 6910:7943-7962 | MS.gene99081:CDS | 50.0% | |
| AGTAGGGGTTGCAAACCAGA+CGG | + | 6910:8492-8511 | MS.gene99081:CDS | 50.0% | |
| ATTGACCTAGGAGTGGTTCC+CGG | - | 6910:7857-7876 | MS.gene99081:intergenic | 50.0% | |
| ATTGTCCGCTCATAGCACGA+TGG | - | 6910:8620-8639 | MS.gene99081:intergenic | 50.0% | |
| CACTTCCATCGTGCTATGAG+CGG | + | 6910:8612-8631 | MS.gene99081:CDS | 50.0% | |
| CATTCGCCAAGCGAATGAAG+TGG | - | 6910:7716-7735 | MS.gene99081:intergenic | 50.0% | |
| CCCGGGCATCCTCAAAAAAA+AGG | - | 6910:7839-7858 | MS.gene99081:intergenic | 50.0% | |
| CGATAAATCCAGACCCGGAA+AGG | + | 6910:7047-7066 | MS.gene99081:CDS | 50.0% | |
| CTAAATCACTTCGGGTCAGC+GGG | + | 6910:7298-7317 | MS.gene99081:CDS | 50.0% | |
| CTCAAATAGGACTTGTCCCG+CGG | - | 6910:8763-8782 | MS.gene99081:intergenic | 50.0% | |
| CTGGAATGAAGACACCCGAT+CGG | - | 6910:7108-7127 | MS.gene99081:intergenic | 50.0% | |
| GAAAGGAAAGAGCGAGATGG+TGG | - | 6910:7766-7785 | MS.gene99081:intergenic | 50.0% | |
| GCGCCCCTCCTTGAATTATT+CGG | + | 6910:7470-7489 | MS.gene99081:CDS | 50.0% | |
| GGAAAAGAGTCGAGTCGATC+AGG | + | 6910:7175-7194 | MS.gene99081:CDS | 50.0% | |
| GGCACTCAAAGTTGTAGAGC+TGG | + | 6910:8540-8559 | MS.gene99081:CDS | 50.0% | |
| GGTGGGCATTTGGGAAAGTA+GGG | + | 6910:7082-7101 | MS.gene99081:CDS | 50.0% | |
| GTGGCTGAACCATCTACGAT+GGG | + | 6910:7573-7592 | MS.gene99081:CDS | 50.0% | |
| GTTGACCCACTTCATTCGCT+TGG | + | 6910:7707-7726 | MS.gene99081:CDS | 50.0% | |
| GTTTGGCCGAAGCCAAAAAG+AGG | + | 6910:7685-7704 | MS.gene99081:CDS | 50.0% | |
| TAAATCACTTCGGGTCAGCG+GGG | + | 6910:7299-7318 | MS.gene99081:CDS | 50.0% | |
| TCCACTCTCCTATCCTACCT+AGG | - | 6910:7947-7966 | MS.gene99081:intergenic | 50.0% | |
| TCGACAAGCCGCTACATTAG+CGG | + | 6910:8809-8828 | MS.gene99081:CDS | 50.0% | |
| TCGCGGATATCCCTATTACC+GGG | + | 6910:8673-8692 | MS.gene99081:CDS | 50.0% | |
| TGGCTGAACCATCTACGATG+GGG | + | 6910:7574-7593 | MS.gene99081:CDS | 50.0% | |
| TTTACAGCCCCGGCGTATTT+CGG | - | 6910:7330-7349 | MS.gene99081:intergenic | 50.0% | |
| TTTGGGAAAGTAGGGCCGAT+CGG | + | 6910:7090-7109 | MS.gene99081:CDS | 50.0% | |
| ! | CGCTATGTCATTTACAGCCC+CGG | - | 6910:7340-7359 | MS.gene99081:intergenic | 50.0% |
| ! | TGGTGGGCATTTGGGAAAGT+AGG | + | 6910:7081-7100 | MS.gene99081:CDS | 50.0% |
| !! | TTATTTTTCCCCCGCTCCGA+CGG | + | 6910:7408-7427 | MS.gene99081:CDS | 50.0% |
| !!! | GGCCAAACACTTTTTCTCGC+TGG | - | 6910:7673-7692 | MS.gene99081:intergenic | 50.0% |
| AAACGAAGTGAGAGGCCGGA+GGG | + | 6910:7149-7168 | MS.gene99081:CDS | 55.0% | |
| ACACGAGCAATCCAACCCGT+AGG | - | 6910:8738-8757 | MS.gene99081:intergenic | 55.0% | |
| ATCCAGACCCGGAAAGGAGA+AGG | + | 6910:7053-7072 | MS.gene99081:CDS | 55.0% | |
| CGACGCGATAAATCCAGACC+CGG | + | 6910:7042-7061 | MS.gene99081:CDS | 55.0% | |
| CGACGGGGTCGAAATGCATT+TGG | - | 6910:7524-7543 | MS.gene99081:intergenic | 55.0% | |
| CGTGGCTGAACCATCTACGA+TGG | + | 6910:7572-7591 | MS.gene99081:CDS | 55.0% | |
| CTTTCCCAAATGCCCACCAC+CGG | - | 6910:7080-7099 | MS.gene99081:intergenic | 55.0% | |
| GCGAATGATCTTCGCTTCGC+GGG | + | 6910:7729-7748 | MS.gene99081:CDS | 55.0% | |
| GCTGAACCATCTACGATGGG+GGG | + | 6910:7576-7595 | MS.gene99081:CDS | 55.0% | |
| GGCGAATGATCTTCGCTTCG+CGG | + | 6910:7728-7747 | MS.gene99081:CDS | 55.0% | |
| GGCTGAACCATCTACGATGG+GGG | + | 6910:7575-7594 | MS.gene99081:CDS | 55.0% | |
| GTAGATGGTTCAGCCACGCT+CGG | - | 6910:7570-7589 | MS.gene99081:intergenic | 55.0% | |
| GTTTCAGTCGTCGTGGTCGA+CGG | - | 6910:7023-7042 | MS.gene99081:intergenic | 55.0% | |
| TCCAGACCCGGAAAGGAGAA+GGG | + | 6910:7054-7073 | MS.gene99081:CDS | 55.0% | |
| TTGACCTAGGAGTGGTTCCC+GGG | - | 6910:7856-7875 | MS.gene99081:intergenic | 55.0% | |
| TTGGATTGCTCGTGTGTCCG+CGG | + | 6910:8743-8762 | MS.gene99081:CDS | 55.0% | |
| TTGGGAAAGTAGGGCCGATC+GGG | + | 6910:7091-7110 | MS.gene99081:CDS | 55.0% | |
| TTTCAGTCGTCGTGGTCGAC+GGG | - | 6910:7022-7041 | MS.gene99081:intergenic | 55.0% | |
| AAAGGAGAAGGGCCGGTGGT+GGG | + | 6910:7065-7084 | MS.gene99081:CDS | 60.0% | |
| AGCCATTGAAGCAGCGCGTC+GGG | + | 6910:8578-8597 | MS.gene99081:CDS | 60.0% | |
| AGTCGATCAGGCTCGACGAC+CGG | + | 6910:7187-7206 | MS.gene99081:CDS | 60.0% | |
| CAGCGCGTCGGGCTATAATC+GGG | + | 6910:8589-8608 | MS.gene99081:CDS | 60.0% | |
| GAAACGAAGTGAGAGGCCGG+AGG | + | 6910:7148-7167 | MS.gene99081:CDS | 60.0% | |
| GAGCCATTGAAGCAGCGCGT+CGG | + | 6910:8577-8596 | MS.gene99081:CDS | 60.0% | |
| GCAGCGCGTCGGGCTATAAT+CGG | + | 6910:8588-8607 | MS.gene99081:CDS | 60.0% | |
| TAGATGACTCGTCGGGCCGT+CGG | - | 6910:7427-7446 | MS.gene99081:intergenic | 60.0% | |
| TCGCGTCGTTTCAGTCGTCG+TGG | - | 6910:7030-7049 | MS.gene99081:intergenic | 60.0% | |
| TGGATTGCTCGTGTGTCCGC+GGG | + | 6910:8744-8763 | MS.gene99081:CDS | 60.0% | |
| TTCAGTCGTCGTGGTCGACG+GGG | - | 6910:7021-7040 | MS.gene99081:intergenic | 60.0% | |
| TTCGCTCCCCCCATCGTAGA+TGG | - | 6910:7585-7604 | MS.gene99081:intergenic | 60.0% | |
| ! | CGACTCTTTTCCCTGCCCTC+CGG | - | 6910:7167-7186 | MS.gene99081:intergenic | 60.0% |
| ! | TCATTTCGTGGCACCGAGCG+TGG | + | 6910:7554-7573 | MS.gene99081:CDS | 60.0% |
| AAGTGAGAGGCCGGAGGGCA+GGG | + | 6910:7154-7173 | MS.gene99081:CDS | 65.0% | |
| AGCCCGACGCGCTGCTTCAA+TGG | - | 6910:8583-8602 | MS.gene99081:intergenic | 65.0% | |
| ATGGGGGGAGCGAATGCGCA+GGG | + | 6910:7591-7610 | MS.gene99081:CDS | 65.0% | |
| CACCGGCCCTTCTCCTTTCC+GGG | - | 6910:7063-7082 | MS.gene99081:intergenic | 65.0% | |
| CCACCGGCCCTTCTCCTTTC+CGG | - | 6910:7064-7083 | MS.gene99081:intergenic | 65.0% | |
| GAAAGGAGAAGGGCCGGTGG+TGG | + | 6910:7064-7083 | MS.gene99081:CDS | 65.0% | |
| GACCCGGAAAGGAGAAGGGC+CGG | + | 6910:7058-7077 | MS.gene99081:CDS | 65.0% | |
| GATGCCCGGGAACCACTCCT+AGG | + | 6910:7849-7868 | MS.gene99081:CDS | 65.0% | |
| GCCCTTCTCCTTTCCGGGTC+TGG | - | 6910:7058-7077 | MS.gene99081:intergenic | 65.0% | |
| GGCGCATCCGAAATACGCCG+GGG | + | 6910:7320-7339 | MS.gene99081:CDS | 65.0% | |
| GGGCGCATCCGAAATACGCC+GGG | + | 6910:7319-7338 | MS.gene99081:CDS | 65.0% | |
| GGGGCGCATCCGAAATACGC+CGG | + | 6910:7318-7337 | MS.gene99081:CDS | 65.0% | |
| GTCGATCAGGCTCGACGACC+GGG | + | 6910:7188-7207 | MS.gene99081:CDS | 65.0% | |
| ! | TCAAGGAGGGGCGCACTGCA+GGG | - | 6910:7464-7483 | MS.gene99081:intergenic | 65.0% |
| ! | TTCAAGGAGGGGCGCACTGC+AGG | - | 6910:7465-7484 | MS.gene99081:intergenic | 65.0% |
| !! | AAGGGCCGGTGGTGGGCATT+TGG | + | 6910:7072-7091 | MS.gene99081:CDS | 65.0% |
| !! | AGGGCCGGTGGTGGGCATTT+GGG | + | 6910:7073-7092 | MS.gene99081:CDS | 65.0% |
| CCGGAAAGGAGAAGGGCCGG+TGG | + | 6910:7061-7080 | MS.gene99081:CDS | 70.0% | |
| GAAGTGAGAGGCCGGAGGGC+AGG | + | 6910:7153-7172 | MS.gene99081:CDS | 70.0% | |
| GATGGGGGGAGCGAATGCGC+AGG | + | 6910:7590-7609 | MS.gene99081:CDS | 70.0% | |
| ACTCGTCGGGCCGTCGGAGC+GGG | - | 6910:7421-7440 | MS.gene99081:intergenic | 75.0% | |
| GACTCGTCGGGCCGTCGGAG+CGG | - | 6910:7422-7441 | MS.gene99081:intergenic | 75.0% | |
| ! | AGGAGGGGCGCACTGCAGGG+AGG | - | 6910:7461-7480 | MS.gene99081:intergenic | 75.0% |
| ! | GGAGGGGCGCACTGCAGGGA+GGG | - | 6910:7460-7479 | MS.gene99081:intergenic | 75.0% |
| ! | CTCGTCGGGCCGTCGGAGCG+GGG | - | 6910:7420-7439 | MS.gene99081:intergenic | 80.0% |
| ! | TCGTCGGGCCGTCGGAGCGG+GGG | - | 6910:7419-7438 | MS.gene99081:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 6910 | gene | 6969 | 8871 | 6969 | ID=MS.gene99081 |
| 6910 | mRNA | 6969 | 8871 | 6969 | ID=MS.gene99081.t1;Parent=MS.gene99081 |
| 6910 | exon | 6969 | 8398 | 6969 | ID=MS.gene99081.t1.exon1;Parent=MS.gene99081.t1 |
| 6910 | CDS | 6969 | 8398 | 6969 | ID=cds.MS.gene99081.t1;Parent=MS.gene99081.t1 |
| 6910 | exon | 8484 | 8871 | 8484 | ID=MS.gene99081.t1.exon2;Parent=MS.gene99081.t1 |
| 6910 | CDS | 8484 | 8871 | 8484 | ID=cds.MS.gene99081.t1;Parent=MS.gene99081.t1 |
| Gene Sequence |
| Protein sequence |
