Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99977.t1 | AET03069.2 | 71.2 | 410 | 75 | 4 | 1 | 408 | 1 | 369 | 5.70E-150 | 540.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99977.t1 | Q56XY2 | 84.3 | 268 | 42 | 0 | 1 | 268 | 1 | 268 | 1.1e-133 | 478.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99977.t1 | G7LEM4 | 71.2 | 410 | 75 | 4 | 1 | 408 | 1 | 369 | 4.1e-150 | 540.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054467 | MS.gene99977 | 0.806599 | 7.61E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene99977 | 0.80446 | 2.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34135 | MS.gene99977 | PPI |
| MS.gene006260 | MS.gene99977 | PPI |
| MS.gene70743 | MS.gene99977 | PPI |
| MS.gene061152 | MS.gene99977 | PPI |
| MS.gene25822 | MS.gene99977 | PPI |
| MS.gene49124 | MS.gene99977 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99977.t1 | MTR_8g062340 | 74.020 | 408 | 67 | 5 | 1 | 408 | 1 | 369 | 0.0 | 584 |
| MS.gene99977.t1 | MTR_8g062340 | 97.761 | 268 | 6 | 0 | 1 | 268 | 1 | 268 | 0.0 | 540 |
| MS.gene99977.t1 | MTR_5g089950 | 92.910 | 268 | 19 | 0 | 1 | 268 | 1 | 268 | 0.0 | 518 |
| MS.gene99977.t1 | MTR_3g080040 | 39.689 | 257 | 147 | 4 | 1 | 256 | 1 | 250 | 3.69e-56 | 186 |
| MS.gene99977.t1 | MTR_7g092980 | 62.937 | 143 | 14 | 3 | 272 | 375 | 1 | 143 | 4.86e-26 | 103 |
| MS.gene99977.t1 | MTR_1g100240 | 27.458 | 295 | 190 | 9 | 6 | 298 | 61 | 333 | 2.19e-20 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99977.t1 | AT5G22370 | 84.328 | 268 | 42 | 0 | 1 | 268 | 1 | 268 | 4.24e-167 | 471 |
| MS.gene99977.t1 | AT5G22370 | 84.328 | 268 | 42 | 0 | 1 | 268 | 1 | 268 | 4.24e-167 | 471 |
| MS.gene99977.t1 | AT5G22370 | 84.328 | 268 | 42 | 0 | 1 | 268 | 1 | 268 | 4.24e-167 | 471 |
| MS.gene99977.t1 | AT4G12790 | 39.326 | 267 | 151 | 6 | 1 | 266 | 1 | 257 | 7.00e-54 | 181 |
| MS.gene99977.t1 | AT4G12790 | 39.326 | 267 | 151 | 6 | 1 | 266 | 1 | 257 | 7.00e-54 | 181 |
| MS.gene99977.t1 | AT4G12790 | 39.326 | 267 | 151 | 6 | 1 | 266 | 1 | 257 | 7.00e-54 | 181 |
| MS.gene99977.t1 | AT4G12790 | 39.326 | 267 | 151 | 6 | 1 | 266 | 1 | 257 | 7.00e-54 | 181 |
| MS.gene99977.t1 | AT4G12790 | 39.326 | 267 | 151 | 6 | 1 | 266 | 1 | 257 | 7.00e-54 | 181 |
| MS.gene99977.t1 | AT4G12790 | 39.326 | 267 | 151 | 6 | 1 | 266 | 1 | 257 | 7.00e-54 | 181 |
| MS.gene99977.t1 | AT4G21800 | 26.284 | 331 | 212 | 11 | 6 | 327 | 45 | 352 | 3.91e-17 | 83.2 |
| MS.gene99977.t1 | AT4G21800 | 26.284 | 331 | 212 | 11 | 6 | 327 | 45 | 352 | 3.91e-17 | 83.2 |
Find 53 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAAGAAATTAAATTTA+AGG | 0.160293 | 8.4:-39220212 | MS.gene99977:CDS |
| TCTCAGTTTCTCAGTCTTAT+TGG | 0.191410 | 8.4:-39221919 | MS.gene99977:CDS |
| GTTAGTTTCATGATATTATT+AGG | 0.223085 | 8.4:-39216143 | MS.gene99977:CDS |
| GAAGGTTGCTGTTGTCAATT+TGG | 0.238676 | 8.4:-39221774 | MS.gene99977:CDS |
| GTTGAAAATGAAGATTCTTT+AGG | 0.280187 | 8.4:-39217167 | MS.gene99977:CDS |
| GAGTTTCATGATGACATTCT+TGG | 0.297509 | 8.4:+39220233 | None:intergenic |
| CATAAAGAAATTAAATTTAA+GGG | 0.342873 | 8.4:-39220211 | MS.gene99977:intron |
| CATATGTAGCATTGTGGATA+AGG | 0.347185 | 8.4:+39220041 | None:intergenic |
| TATTATTAGGACCTAATTCC+AGG | 0.367512 | 8.4:-39216130 | MS.gene99977:CDS |
| TGAAATAGTAGAAGATTCTA+TGG | 0.374218 | 8.4:-39217051 | MS.gene99977:CDS |
| TGTTGTACGAGCCTGGAATT+AGG | 0.377934 | 8.4:+39216119 | None:intergenic |
| GTGTTTGGGCAAGTAGTAAT+TGG | 0.379485 | 8.4:-39221982 | MS.gene99977:CDS |
| GCAGTTAACGGCAGTGCATT+TGG | 0.382478 | 8.4:-39220118 | MS.gene99977:intron |
| TCAAAATCTTTCGTTCCATA+AGG | 0.394956 | 8.4:+39216194 | None:intergenic |
| ACCAATGGGTACATATTTGC+CGG | 0.402941 | 8.4:-39218738 | MS.gene99977:CDS |
| CTTATCCACAATGCTACATA+TGG | 0.405899 | 8.4:-39220040 | MS.gene99977:CDS |
| ACTATCGTCGTGACAGCGTC+TGG | 0.413491 | 8.4:-39216226 | MS.gene99977:CDS |
| GTAATTGGTCCTCCTGGCTC+TGG | 0.464770 | 8.4:-39221967 | MS.gene99977:CDS |
| AGCAGGTCTTGTATACTGTA+TGG | 0.470732 | 8.4:-39220502 | MS.gene99977:intron |
| GGCAAAACAACTTACTGTAA+TGG | 0.474727 | 8.4:-39221946 | MS.gene99977:CDS |
| CAAGTAGTAATTGGTCCTCC+TGG | 0.487745 | 8.4:-39221973 | MS.gene99977:CDS |
| TACAGGACAAAGAGAGTGTA+GGG | 0.495599 | 8.4:-39218785 | MS.gene99977:intron |
| ATTGATTTAATTGAGAGCTA+CGG | 0.505811 | 8.4:-39219988 | MS.gene99977:CDS |
| ATGTAATAACCTTTCAGAAG+AGG | 0.516692 | 8.4:+39220435 | None:intergenic |
| TACGGTAATGAATCATTAGC+AGG | 0.520426 | 8.4:+39221749 | None:intergenic |
| ATTGAGAGCTACGGAAAGCT+AGG | 0.526200 | 8.4:-39219979 | MS.gene99977:intron |
| AATGCACTGATGTACTTCCC+AGG | 0.529333 | 8.4:+39220072 | None:intergenic |
| GTCATGATAGAACATTCTCT+TGG | 0.534776 | 8.4:-39221572 | MS.gene99977:CDS |
| TAAACCTTCATATTCTTCCA+CGG | 0.537692 | 8.4:+39216920 | None:intergenic |
| AGCTGATAGACAAAACCAAT+GGG | 0.538423 | 8.4:-39218752 | MS.gene99977:CDS |
| GCCGGCAAATATGTACCCAT+TGG | 0.538472 | 8.4:+39218737 | None:intergenic |
| CTCACCTTTGTAGTGACCCT+GGG | 0.542915 | 8.4:-39220089 | MS.gene99977:CDS |
| AGTTTCTCAGTCTTATTGGA+AGG | 0.547465 | 8.4:-39221915 | MS.gene99977:intron |
| ATCCTCACTCTGGTAAGTAC+AGG | 0.548378 | 8.4:-39219790 | MS.gene99977:intron |
| GAACATTCTCTTGGTCCTAA+CGG | 0.549358 | 8.4:-39221563 | MS.gene99977:CDS |
| GGAATAGACTTACCTCCGTT+AGG | 0.557616 | 8.4:+39221548 | None:intergenic |
| GCTCACCTTTGTAGTGACCC+TGG | 0.560452 | 8.4:-39220090 | MS.gene99977:CDS |
| AAGCTGATAGACAAAACCAA+TGG | 0.563724 | 8.4:-39218753 | MS.gene99977:CDS |
| TGAATGTGCTATTAACATTG+AGG | 0.573516 | 8.4:-39221615 | MS.gene99977:CDS |
| TTACAGGACAAAGAGAGTGT+AGG | 0.576655 | 8.4:-39218786 | MS.gene99977:intron |
| GTTGCCGTGGAAGAATATGA+AGG | 0.590189 | 8.4:-39216924 | MS.gene99977:intron |
| AAATTGAAACCTCTTCTGAA+AGG | 0.597814 | 8.4:-39220444 | MS.gene99977:intron |
| CTTGATAAAGATCCTCACTC+TGG | 0.598377 | 8.4:-39219800 | MS.gene99977:CDS |
| AACCGCACTTGCATCTATGC+CGG | 0.609647 | 8.4:+39218719 | None:intergenic |
| ATGCACTGATGTACTTCCCA+GGG | 0.635507 | 8.4:+39220073 | None:intergenic |
| TAGTTCCATATGTAGCATTG+TGG | 0.637705 | 8.4:+39220035 | None:intergenic |
| TGCCGGCATAGATGCAAGTG+CGG | 0.644513 | 8.4:-39218721 | MS.gene99977:intron |
| CGTACAACAAAATGCGTACG+AGG | 0.653291 | 8.4:-39216105 | MS.gene99977:CDS |
| ACTTCCCAGGGTCACTACAA+AGG | 0.660832 | 8.4:+39220085 | None:intergenic |
| CACCTGTACTTACCAGAGTG+AGG | 0.667485 | 8.4:+39219788 | None:intergenic |
| CATTCTCTTGGTCCTAACGG+AGG | 0.702168 | 8.4:-39221560 | MS.gene99977:intron |
| TATTTGCAGAAAGCTCACAA+AGG | 0.702746 | 8.4:-39218943 | MS.gene99977:intron |
| TTTGACAAGACATTTATGTG+GGG | 0.708491 | 8.4:+39220012 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTAATTTTTATAATAA+TGG | + | chr8.4:39221222-39221241 | None:intergenic | 0.0% |
| !! | AATTATTATTCACTATTATT+TGG | - | chr8.4:39220750-39220769 | MS.gene99977:intron | 10.0% |
| !! | CATAAAGAAATTAAATTTAA+GGG | - | chr8.4:39217874-39217893 | MS.gene99977:intron | 10.0% |
| !! | CATATCTATATTTATTATTA+AGG | + | chr8.4:39216452-39216471 | None:intergenic | 10.0% |
| !! | TCATAAAGAAATTAAATTTA+AGG | - | chr8.4:39217873-39217892 | MS.gene99977:intron | 10.0% |
| !!! | TATCTTTTTAATTAAATTTC+GGG | - | chr8.4:39216225-39216244 | MS.gene99977:CDS | 10.0% |
| !! | AAATTAACTGTTATATTGAA+TGG | - | chr8.4:39217199-39217218 | MS.gene99977:CDS | 15.0% |
| !! | AATTAACTGTTATATTGAAT+GGG | - | chr8.4:39217200-39217219 | MS.gene99977:CDS | 15.0% |
| !! | ATAGTGAATAATAATTCAAA+TGG | + | chr8.4:39220746-39220765 | None:intergenic | 15.0% |
| !! | CAAATAAGAAAATAAAACTT+AGG | + | chr8.4:39218453-39218472 | None:intergenic | 15.0% |
| !! | TATAGTTAAGTTAATTGATA+TGG | - | chr8.4:39216422-39216441 | MS.gene99977:intron | 15.0% |
| !! | TATGAACAAAAGAAAAAATT+AGG | + | chr8.4:39219241-39219260 | None:intergenic | 15.0% |
| !! | TATTTGAGAAATTATTAAGA+AGG | - | chr8.4:39216778-39216797 | MS.gene99977:intron | 15.0% |
| !!! | AATATTGTTGTTATTCTTAA+AGG | - | chr8.4:39216380-39216399 | MS.gene99977:intron | 15.0% |
| !!! | ATAAGATTTAAATTGCATTT+TGG | - | chr8.4:39221506-39221525 | MS.gene99977:intron | 15.0% |
| !!! | ATAGTTTTTTTAATGGTAAA+TGG | + | chr8.4:39216761-39216780 | None:intergenic | 15.0% |
| !!! | TTCTCAAATAGTTTTTTTAA+TGG | + | chr8.4:39216768-39216787 | None:intergenic | 15.0% |
| !! | AAAAAAAATAAGCAACATAG+TGG | + | chr8.4:39221591-39221610 | None:intergenic | 20.0% |
| !! | AAATCTTATTGAATTCACAA+AGG | + | chr8.4:39221495-39221514 | None:intergenic | 20.0% |
| !! | AATACTTAAAACAACCAAAA+AGG | + | chr8.4:39216561-39216580 | None:intergenic | 20.0% |
| !! | AATATGGCAGAAAAATAAAA+GGG | + | chr8.4:39218670-39218689 | None:intergenic | 20.0% |
| !! | AGAATAGTAGAATGAATAAA+TGG | - | chr8.4:39220067-39220086 | MS.gene99977:CDS | 20.0% |
| !! | AGAGATACTAATGTAAAATA+TGG | - | chr8.4:39218847-39218866 | MS.gene99977:intron | 20.0% |
| !! | AGTTTACTGTAAGAATAAAA+AGG | - | chr8.4:39219891-39219910 | MS.gene99977:intron | 20.0% |
| !! | ATAACAACAATATTTCAAAG+AGG | + | chr8.4:39216374-39216393 | None:intergenic | 20.0% |
| !! | ATACCTAAATTAGTAGAAAT+TGG | + | chr8.4:39216256-39216275 | None:intergenic | 20.0% |
| !! | ATATATCTATATATCCTCAA+AGG | + | chr8.4:39221466-39221485 | None:intergenic | 20.0% |
| !! | GAATAGTAGAATGAATAAAT+GGG | - | chr8.4:39220068-39220087 | MS.gene99977:CDS | 20.0% |
| !! | GTTTACTGTAAGAATAAAAA+GGG | - | chr8.4:39219892-39219911 | MS.gene99977:intron | 20.0% |
| !! | TAACATTCAGTAGAAAAATA+AGG | + | chr8.4:39221434-39221453 | None:intergenic | 20.0% |
| !! | TAATATGGCAGAAAAATAAA+AGG | + | chr8.4:39218671-39218690 | None:intergenic | 20.0% |
| !! | TAATGAAATCAAATATATGC+TGG | - | chr8.4:39218961-39218980 | MS.gene99977:intron | 20.0% |
| !! | TATATCTATATATCCTCAAA+GGG | + | chr8.4:39221465-39221484 | None:intergenic | 20.0% |
| !! | TGAATAATAATTCAAATGGT+GGG | + | chr8.4:39220742-39220761 | None:intergenic | 20.0% |
| !! | TTAGTTTATTTGAGCTTATT+TGG | + | chr8.4:39217496-39217515 | None:intergenic | 20.0% |
| !! | TTTCATTCTTTGTATACAAT+AGG | - | chr8.4:39219996-39220015 | MS.gene99977:CDS | 20.0% |
| !! | TTTCCAATTTCTACTAATTT+AGG | - | chr8.4:39216250-39216269 | MS.gene99977:intron | 20.0% |
| !!! | AGGAAACTACATTTTAATAA+AGG | + | chr8.4:39218433-39218452 | None:intergenic | 20.0% |
| !!! | ATTGATGTGGAAATTATTTT+TGG | - | chr8.4:39221728-39221747 | MS.gene99977:intron | 20.0% |
| !!! | ATTTTCATTTATGCAGTTAA+CGG | - | chr8.4:39217955-39217974 | MS.gene99977:intron | 20.0% |
| !!! | CAAATTAGTTCTTGAAATAA+TGG | + | chr8.4:39217934-39217953 | None:intergenic | 20.0% |
| !!! | GAATGAGTATTTTTTATCAA+TGG | - | chr8.4:39220839-39220858 | MS.gene99977:intron | 20.0% |
| !!! | GTATTTTTTATCAATGGAAA+TGG | - | chr8.4:39220845-39220864 | MS.gene99977:intron | 20.0% |
| !!! | GTTAGTTTCATGATATTATT+AGG | - | chr8.4:39221942-39221961 | MS.gene99977:CDS | 20.0% |
| !!! | TATGTTGCTTATTTTTTTTC+TGG | - | chr8.4:39221592-39221611 | MS.gene99977:CDS | 20.0% |
| !!! | TCTTTAGAAAATATTCTTGT+TGG | - | chr8.4:39219720-39219739 | MS.gene99977:intron | 20.0% |
| !!! | TTAAGTTGTTAATCAAAACA+GGG | + | chr8.4:39217256-39217275 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTCTTGTGATATT+GGG | - | chr8.4:39220797-39220816 | MS.gene99977:intron | 20.0% |
| !!! | TTTAAAATATGTGCTTGTTA+AGG | - | chr8.4:39216588-39216607 | MS.gene99977:intron | 20.0% |
| !!! | TTTTACAACATTAGATATTC+AGG | - | chr8.4:39219202-39219221 | MS.gene99977:intron | 20.0% |
| !!! | TTTTTCTACTGAATGTTATA+AGG | - | chr8.4:39221436-39221455 | MS.gene99977:intron | 20.0% |
| ! | AAAAAAAACCGTGTATCTTA+AGG | + | chr8.4:39219088-39219107 | None:intergenic | 25.0% |
| ! | AAGAAAAAATTAGGCATATC+TGG | + | chr8.4:39219232-39219251 | None:intergenic | 25.0% |
| ! | AAGAACTAGAAAAACTATTG+TGG | - | chr8.4:39216648-39216667 | MS.gene99977:intron | 25.0% |
| ! | AATGAAGTAAAATTACCAAG+TGG | + | chr8.4:39221773-39221792 | None:intergenic | 25.0% |
| ! | AGAACTAGAAAAACTATTGT+GGG | - | chr8.4:39216649-39216668 | MS.gene99977:intron | 25.0% |
| ! | AGTGCATTTAAGGATAATTT+AGG | + | chr8.4:39217704-39217723 | None:intergenic | 25.0% |
| ! | ATAAAATGTTAACCAAATCG+TGG | + | chr8.4:39218896-39218915 | None:intergenic | 25.0% |
| ! | ATCTAGAGAAAAATATTGAC+TGG | - | chr8.4:39217609-39217628 | MS.gene99977:intron | 25.0% |
| ! | CAATATTTCAAAGAGGTTAA+TGG | + | chr8.4:39216367-39216386 | None:intergenic | 25.0% |
| ! | GATTAAGGAATGGAATAATT+TGG | + | chr8.4:39221291-39221310 | None:intergenic | 25.0% |
| ! | GTGAATAATAATTCAAATGG+TGG | + | chr8.4:39220743-39220762 | None:intergenic | 25.0% |
| ! | GTTAAATTGAAAAGATGCTT+AGG | + | chr8.4:39221371-39221390 | None:intergenic | 25.0% |
| ! | GTTGAAAATGAAGATTCTTT+AGG | - | chr8.4:39220918-39220937 | MS.gene99977:intron | 25.0% |
| ! | GTTTAGTAGAAATTCTAAGT+TGG | - | chr8.4:39219267-39219286 | MS.gene99977:intron | 25.0% |
| ! | TATATCATCCTTAAGATACA+CGG | - | chr8.4:39219077-39219096 | MS.gene99977:intron | 25.0% |
| ! | TATCTATAATAATCCCAATC+AGG | + | chr8.4:39219419-39219438 | None:intergenic | 25.0% |
| ! | TGAAATAGTAGAAGATTCTA+TGG | - | chr8.4:39221034-39221053 | MS.gene99977:intron | 25.0% |
| ! | TGGAAAACTTGAAAAACATA+TGG | - | chr8.4:39220618-39220637 | MS.gene99977:intron | 25.0% |
| ! | TGTATAAAAATCAAGGTTGA+AGG | + | chr8.4:39218232-39218251 | None:intergenic | 25.0% |
| ! | TTAATATTTACTCTTTCGTC+CGG | + | chr8.4:39216720-39216739 | None:intergenic | 25.0% |
| ! | TTACAAGCTGCTAATATAAA+AGG | + | chr8.4:39218944-39218963 | None:intergenic | 25.0% |
| ! | TTAGAAAATATTCTTGTTGG+CGG | - | chr8.4:39219723-39219742 | MS.gene99977:intron | 25.0% |
| ! | TTCACAGCAACAATTTAATA+TGG | + | chr8.4:39218810-39218829 | None:intergenic | 25.0% |
| !! | AGATGAAAATGATTTTGAAC+TGG | - | chr8.4:39221127-39221146 | MS.gene99977:intron | 25.0% |
| !! | AGCATCTTTTCAATTTAACT+AGG | - | chr8.4:39221372-39221391 | MS.gene99977:intron | 25.0% |
| !! | ATAAGTACTTGTGAGATTTT+TGG | + | chr8.4:39217472-39217491 | None:intergenic | 25.0% |
| !! | ATTGATTTAATTGAGAGCTA+CGG | - | chr8.4:39218097-39218116 | MS.gene99977:intron | 25.0% |
| !! | GTTAAGTTGTTAATCAAAAC+AGG | + | chr8.4:39217257-39217276 | None:intergenic | 25.0% |
| !! | TGGTTAAGTTTGGTTTAAAT+GGG | - | chr8.4:39219022-39219041 | MS.gene99977:intron | 25.0% |
| !! | TTTTGACAAGACATTTATGT+GGG | + | chr8.4:39218077-39218096 | None:intergenic | 25.0% |
| !! | TTTTTGACAAGACATTTATG+TGG | + | chr8.4:39218078-39218097 | None:intergenic | 25.0% |
| !!! | AATATTGATGATGATTGATG+TGG | - | chr8.4:39221715-39221734 | MS.gene99977:intron | 25.0% |
| !!! | ACTATTTTTATAAGCTGTCA+TGG | - | chr8.4:39217380-39217399 | MS.gene99977:intron | 25.0% |
| !!! | AGTAGAAGATTTTTTGATTG+AGG | - | chr8.4:39220989-39221008 | MS.gene99977:intron | 25.0% |
| !!! | ATACAAAGCTTCACTTTTAT+AGG | + | chr8.4:39220131-39220150 | None:intergenic | 25.0% |
| !!! | CTTCTTTTTTCTTGTGATAT+TGG | - | chr8.4:39220796-39220815 | MS.gene99977:intron | 25.0% |
| !!! | GTTAAATGCATTTTTTAAGC+AGG | - | chr8.4:39218155-39218174 | MS.gene99977:intron | 25.0% |
| !!! | TAATTTTCCTTGTTTGCAAA+TGG | - | chr8.4:39218999-39219018 | MS.gene99977:intron | 25.0% |
| !!! | TATGTTTTTCAAGTTTTCCA+AGG | + | chr8.4:39220618-39220637 | None:intergenic | 25.0% |
| !!! | TCTTTTTTCTTGTGATATTG+GGG | - | chr8.4:39220798-39220817 | MS.gene99977:intron | 25.0% |
| AAAAAAGAAGTCCAAGACAA+AGG | + | chr8.4:39220786-39220805 | None:intergenic | 30.0% | |
| AAACACACTAACTACTTAAC+AGG | - | chr8.4:39219840-39219859 | MS.gene99977:CDS | 30.0% | |
| AAACATATGGATCTAATGAC+AGG | - | chr8.4:39220631-39220650 | MS.gene99977:intron | 30.0% | |
| AAATTGAAACCTCTTCTGAA+AGG | - | chr8.4:39217641-39217660 | MS.gene99977:intron | 30.0% | |
| AACATATGGATCTAATGACA+GGG | - | chr8.4:39220632-39220651 | MS.gene99977:intron | 30.0% | |
| AACTAGAAAAACTATTGTGG+GGG | - | chr8.4:39216651-39216670 | MS.gene99977:intron | 30.0% | |
| ACCCTGTCAACAATTTAATA+TGG | + | chr8.4:39218686-39218705 | None:intergenic | 30.0% | |
| AGAAGAAAAAAGAGAAGTTG+TGG | - | chr8.4:39221193-39221212 | MS.gene99977:intron | 30.0% | |
| AGAGTACATCAAATCAATAG+AGG | - | chr8.4:39216619-39216638 | MS.gene99977:intron | 30.0% | |
| AGTTGCATGAGAAGAAAAAA+AGG | + | chr8.4:39219443-39219462 | None:intergenic | 30.0% | |
| ATGTAATAACCTTTCAGAAG+AGG | + | chr8.4:39217653-39217672 | None:intergenic | 30.0% | |
| ATTAAATTGTTGACAGGGTA+AGG | - | chr8.4:39218687-39218706 | MS.gene99977:intron | 30.0% | |
| ATTTCAAAGAGGTTAATGGA+AGG | + | chr8.4:39216363-39216382 | None:intergenic | 30.0% | |
| CAAAATTCTTCCTGATAGTA+AGG | - | chr8.4:39220658-39220677 | MS.gene99977:intron | 30.0% | |
| CAGAAAAATAAAAGGGCAAA+GGG | + | chr8.4:39218663-39218682 | None:intergenic | 30.0% | |
| CAGACAAATAAAAGAGCAAA+GGG | + | chr8.4:39218787-39218806 | None:intergenic | 30.0% | |
| GAACTAGAAAAACTATTGTG+GGG | - | chr8.4:39216650-39216669 | MS.gene99977:intron | 30.0% | |
| GAAGAAAAAATAGTTCCACT+TGG | + | chr8.4:39217823-39217842 | None:intergenic | 30.0% | |
| GAGTTTAGTAAGATTGCTAT+GGG | - | chr8.4:39219389-39219408 | MS.gene99977:intron | 30.0% | |
| GCACATCTGTATAAAAATCA+AGG | + | chr8.4:39218239-39218258 | None:intergenic | 30.0% | |
| GCCATATTAAATTGTTGACA+GGG | - | chr8.4:39218682-39218701 | MS.gene99977:intron | 30.0% | |
| GGAAATGACTTATTGTAACT+CGG | - | chr8.4:39219679-39219698 | MS.gene99977:intron | 30.0% | |
| GTGAATCAGTTGTTAAAAGA+TGG | - | chr8.4:39220260-39220279 | MS.gene99977:CDS | 30.0% | |
| TAAACCTTCATATTCTTCCA+CGG | + | chr8.4:39221168-39221187 | None:intergenic | 30.0% | |
| TAATATTTACTCTTTCGTCC+GGG | + | chr8.4:39216719-39216738 | None:intergenic | 30.0% | |
| TATTATTAGGACCTAATTCC+AGG | - | chr8.4:39221955-39221974 | MS.gene99977:CDS | 30.0% | |
| TATTTGTGTTAGTGTTTCAG+AGG | - | chr8.4:39217113-39217132 | MS.gene99977:CDS | 30.0% | |
| TCAAAATCTTTCGTTCCATA+AGG | + | chr8.4:39221894-39221913 | None:intergenic | 30.0% | |
| TCATTCTGTTACAAAGCAAA+TGG | + | chr8.4:39220825-39220844 | None:intergenic | 30.0% | |
| TCTAGTATCAAAAGTGATGA+TGG | - | chr8.4:39219587-39219606 | MS.gene99977:intron | 30.0% | |
| TGAGTTTAGTAAGATTGCTA+TGG | - | chr8.4:39219388-39219407 | MS.gene99977:intron | 30.0% | |
| TGCCATATTAAATTGTTGAC+AGG | - | chr8.4:39218681-39218700 | MS.gene99977:intron | 30.0% | |
| TGTAAGAATAAAAAGGGTCA+AGG | - | chr8.4:39219898-39219917 | MS.gene99977:intron | 30.0% | |
| TTTGACAAGACATTTATGTG+GGG | + | chr8.4:39218076-39218095 | None:intergenic | 30.0% | |
| ! | AAGTTGGATTATCCTTTTAC+AGG | - | chr8.4:39219283-39219302 | MS.gene99977:intron | 30.0% |
| ! | AGAGAAAAATATTGACTGGT+TGG | - | chr8.4:39217613-39217632 | MS.gene99977:intron | 30.0% |
| ! | CTCCTATAAACTTGCATTTT+GGG | + | chr8.4:39220022-39220041 | None:intergenic | 30.0% |
| ! | GTGGTTAAGTTTGGTTTAAA+TGG | - | chr8.4:39219021-39219040 | MS.gene99977:intron | 30.0% |
| ! | TCAAGTTTTCCAAGGTAAAA+AGG | + | chr8.4:39220610-39220629 | None:intergenic | 30.0% |
| ! | TGAATGTGCTATTAACATTG+AGG | - | chr8.4:39216470-39216489 | MS.gene99977:intron | 30.0% |
| ! | TGATTACACATTTGAAGTGT+AGG | - | chr8.4:39216932-39216951 | MS.gene99977:CDS | 30.0% |
| ! | TGATTTTGAACTGGATTTTG+AGG | - | chr8.4:39221136-39221155 | MS.gene99977:intron | 30.0% |
| ! | TGTTTAGCTGATAATGCTAT+AGG | - | chr8.4:39221532-39221551 | MS.gene99977:intron | 30.0% |
| ! | TTTCTAAAAACTTAGTGTCC+AGG | + | chr8.4:39221625-39221644 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8.4:39220473-39220492 | None:intergenic | 30.0% |
| !! | AACGAAAGATTTTGAGAACA+TGG | - | chr8.4:39221899-39221918 | MS.gene99977:intron | 30.0% |
| !! | ATCATCACTTTTGATACTAG+AGG | + | chr8.4:39219588-39219607 | None:intergenic | 30.0% |
| !! | GAGATTTTTGGAAGAACTTA+TGG | + | chr8.4:39217460-39217479 | None:intergenic | 30.0% |
| !! | GGCTCTAATAAAAGGTATTA+AGG | + | chr8.4:39217235-39217254 | None:intergenic | 30.0% |
| !! | GTAATTACTTTTGCATGCTA+GGG | - | chr8.4:39218133-39218152 | MS.gene99977:intron | 30.0% |
| !! | GTTTTCTACTTTTCAAATGC+AGG | - | chr8.4:39216289-39216308 | MS.gene99977:intron | 30.0% |
| !! | TATCTACTCTTTGATTTTCC+TGG | - | chr8.4:39217797-39217816 | MS.gene99977:intron | 30.0% |
| !! | TCATCACTTTTGATACTAGA+GGG | + | chr8.4:39219587-39219606 | None:intergenic | 30.0% |
| !! | TGTAATTACTTTTGCATGCT+AGG | - | chr8.4:39218132-39218151 | MS.gene99977:intron | 30.0% |
| !! | TGTTAAAAGATGGCTTTGTA+TGG | - | chr8.4:39220270-39220289 | MS.gene99977:CDS | 30.0% |
| !!! | TATTTTTGGCAGCAGTATAA+GGG | - | chr8.4:39221742-39221761 | MS.gene99977:intron | 30.0% |
| !!! | TCAAAATGAGTGTCGTTTTA+GGG | - | chr8.4:39220475-39220494 | MS.gene99977:CDS | 30.0% |
| !!! | TTATTTTTGGCAGCAGTATA+AGG | - | chr8.4:39221741-39221760 | MS.gene99977:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8.4:39220474-39220493 | MS.gene99977:CDS | 30.0% |
| AAACTCATCCTATTAGTTGG+CGG | - | chr8.4:39219658-39219677 | MS.gene99977:intron | 35.0% | |
| AACTAATCTAAACAGACCCT+AGG | - | chr8.4:39217510-39217529 | MS.gene99977:intron | 35.0% | |
| AACTGTAGATTGCTGAGTTA+AGG | + | chr8.4:39221659-39221678 | None:intergenic | 35.0% | |
| AAGAAACAAAAGGACCAAGA+GGG | - | chr8.4:39220094-39220113 | MS.gene99977:CDS | 35.0% | |
| AAGAGGTTAATGGAAGGATA+CGG | + | chr8.4:39216357-39216376 | None:intergenic | 35.0% | |
| AAGCTGATAGACAAAACCAA+TGG | - | chr8.4:39219332-39219351 | MS.gene99977:intron | 35.0% | |
| AAGTTGAGACCCTTAATTAG+AGG | - | chr8.4:39219755-39219774 | MS.gene99977:intron | 35.0% | |
| AAGTTTATAGGAGGAGAGAA+GGG | - | chr8.4:39220029-39220048 | MS.gene99977:CDS | 35.0% | |
| AATAAAAAGGGTCAAGGCTA+GGG | - | chr8.4:39219904-39219923 | MS.gene99977:intron | 35.0% | |
| ACAGTAAGACACAAATACCT+AGG | + | chr8.4:39217530-39217549 | None:intergenic | 35.0% | |
| ACATATACAAAAGGACCAAG+AGG | - | chr8.4:39220175-39220194 | MS.gene99977:intron | 35.0% | |
| ACCCCTTAGAAGACTATTAT+TGG | + | chr8.4:39219803-39219822 | None:intergenic | 35.0% | |
| ACGATAGTCAATGTCTGAAA+TGG | + | chr8.4:39221847-39221866 | None:intergenic | 35.0% | |
| ACTAGAAAAACTATTGTGGG+GGG | - | chr8.4:39216652-39216671 | MS.gene99977:intron | 35.0% | |
| ACTGTAGATTGCTGAGTTAA+GGG | + | chr8.4:39221658-39221677 | None:intergenic | 35.0% | |
| AGAGATTAATGAGATGGACA+GGG | - | chr8.4:39216805-39216824 | MS.gene99977:intron | 35.0% | |
| AGCCATGACTTCTTTCAAAT+AGG | + | chr8.4:39220426-39220445 | None:intergenic | 35.0% | |
| AGCTGATAGACAAAACCAAT+GGG | - | chr8.4:39219333-39219352 | MS.gene99977:intron | 35.0% | |
| AGGTAAAAAGGCAAAAGCAA+CGG | + | chr8.4:39220598-39220617 | None:intergenic | 35.0% | |
| AGTGCAAGAGAAATACATGA+AGG | - | chr8.4:39221684-39221703 | MS.gene99977:intron | 35.0% | |
| ATAATGACACTTGCTCTCTT+TGG | - | chr8.4:39220704-39220723 | MS.gene99977:intron | 35.0% | |
| ATCTATATATCCTCAAAGGG+TGG | + | chr8.4:39221462-39221481 | None:intergenic | 35.0% | |
| ATGACTTATTGTAACTCGGA+AGG | - | chr8.4:39219683-39219702 | MS.gene99977:intron | 35.0% | |
| ATGCAAGTATCATTTGTGGA+TGG | - | chr8.4:39220302-39220321 | MS.gene99977:intron | 35.0% | |
| ATTCTCTCTTTCTCTCTATG+CGG | - | chr8.4:39218914-39218933 | MS.gene99977:CDS | 35.0% | |
| ATTTGTCTTGTCTATGCTGA+GGG | - | chr8.4:39218468-39218487 | MS.gene99977:intron | 35.0% | |
| CAGTAAGACACAAATACCTA+GGG | + | chr8.4:39217529-39217548 | None:intergenic | 35.0% | |
| CATATACAAAAGGACCAAGA+GGG | - | chr8.4:39220176-39220195 | MS.gene99977:intron | 35.0% | |
| CATATGTAGCATTGTGGATA+AGG | + | chr8.4:39218047-39218066 | None:intergenic | 35.0% | |
| CATCAAATCAATAGAGGTAG+AGG | - | chr8.4:39216625-39216644 | MS.gene99977:intron | 35.0% | |
| CCAAAATGCAAGTTTATAGG+AGG | - | chr8.4:39220020-39220039 | MS.gene99977:CDS | 35.0% | |
| CCTAACTCTCCTCTAATTAA+GGG | + | chr8.4:39219767-39219786 | None:intergenic | 35.0% | |
| CCTACACCTACATATACAAA+AGG | - | chr8.4:39220166-39220185 | MS.gene99977:intron | 35.0% | |
| CCTTAATTAGAGGAGAGTTA+GGG | - | chr8.4:39219765-39219784 | MS.gene99977:intron | 35.0% | |
| CTAGAGTAGTTTAGCTGAAT+AGG | + | chr8.4:39217744-39217763 | None:intergenic | 35.0% | |
| CTCTTGTGTAAAACAGAGTA+AGG | - | chr8.4:39218563-39218582 | MS.gene99977:intron | 35.0% | |
| CTTAATTAGAGGAGAGTTAG+GGG | - | chr8.4:39219766-39219785 | MS.gene99977:intron | 35.0% | |
| CTTATCCACAATGCTACATA+TGG | - | chr8.4:39218045-39218064 | MS.gene99977:intron | 35.0% | |
| CTTTGTATTGTATGTGGTCA+TGG | - | chr8.4:39220143-39220162 | MS.gene99977:intron | 35.0% | |
| GAGTTTCATGATGACATTCT+TGG | + | chr8.4:39217855-39217874 | None:intergenic | 35.0% | |
| GCAGAAAAATAAAAGGGCAA+AGG | + | chr8.4:39218664-39218683 | None:intergenic | 35.0% | |
| GCAGACAAATAAAAGAGCAA+AGG | + | chr8.4:39218788-39218807 | None:intergenic | 35.0% | |
| GCCAATAATAGTCTTCTAAG+GGG | - | chr8.4:39219799-39219818 | MS.gene99977:CDS | 35.0% | |
| GGATCTAGAGATTAATGAGA+TGG | - | chr8.4:39216799-39216818 | MS.gene99977:intron | 35.0% | |
| GGCAAAACAACTTACTGTAA+TGG | - | chr8.4:39216139-39216158 | MS.gene99977:CDS | 35.0% | |
| GGCCAATAATAGTCTTCTAA+GGG | - | chr8.4:39219798-39219817 | MS.gene99977:CDS | 35.0% | |
| GTACTTGTGACAAGTTTACA+AGG | + | chr8.4:39220356-39220375 | None:intergenic | 35.0% | |
| GTCATGATAGAACATTCTCT+TGG | - | chr8.4:39216513-39216532 | MS.gene99977:intron | 35.0% | |
| GTCATTAGATCCTTACTATC+AGG | + | chr8.4:39220671-39220690 | None:intergenic | 35.0% | |
| GTCCTATTTGAAAGAAGTCA+TGG | - | chr8.4:39220421-39220440 | MS.gene99977:intron | 35.0% | |
| GTTCATAAGGGATAAAGAGT+TGG | - | chr8.4:39216677-39216696 | MS.gene99977:intron | 35.0% | |
| TACGGTAATGAATCATTAGC+AGG | + | chr8.4:39216339-39216358 | None:intergenic | 35.0% | |
| TAGAGATTAATGAGATGGAC+AGG | - | chr8.4:39216804-39216823 | MS.gene99977:intron | 35.0% | |
| TAGTTCCATATGTAGCATTG+TGG | + | chr8.4:39218053-39218072 | None:intergenic | 35.0% | |
| TATTTGCAGAAAGCTCACAA+AGG | - | chr8.4:39219142-39219161 | MS.gene99977:intron | 35.0% | |
| TATTTGTCTTGTCTATGCTG+AGG | - | chr8.4:39218467-39218486 | MS.gene99977:intron | 35.0% | |
| TCCAAACTCATCCTATTAGT+TGG | - | chr8.4:39219655-39219674 | MS.gene99977:intron | 35.0% | |
| TCTGCACTTGTAATCTGAAT+AGG | - | chr8.4:39219517-39219536 | MS.gene99977:intron | 35.0% | |
| TGAAATAATGGTTCGACACT+AGG | + | chr8.4:39217922-39217941 | None:intergenic | 35.0% | |
| TGACTTATTGTAACTCGGAA+GGG | - | chr8.4:39219684-39219703 | MS.gene99977:intron | 35.0% | |
| TGGCCAATAATAGTCTTCTA+AGG | - | chr8.4:39219797-39219816 | MS.gene99977:CDS | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr8.4:39218589-39218608 | MS.gene99977:intron | 35.0% | |
| TTAACCACCATTTGCAAACA+AGG | + | chr8.4:39219009-39219028 | None:intergenic | 35.0% | |
| TTCAGATTACAAGTGCAGAA+TGG | + | chr8.4:39219516-39219535 | None:intergenic | 35.0% | |
| TTGCAAATGGTGGTTAAGTT+TGG | - | chr8.4:39219012-39219031 | MS.gene99977:intron | 35.0% | |
| ! | CAAAACAGGGCTCTAATAAA+AGG | + | chr8.4:39217243-39217262 | None:intergenic | 35.0% |
| ! | CCTCCTATAAACTTGCATTT+TGG | + | chr8.4:39220023-39220042 | None:intergenic | 35.0% |
| ! | CCTTTTGTATATGTAGGTGT+AGG | + | chr8.4:39220169-39220188 | None:intergenic | 35.0% |
| ! | CGATAGTCAATGTCTGAAAT+GGG | + | chr8.4:39221846-39221865 | None:intergenic | 35.0% |
| ! | CTTGGTCCTTTTGTATATGT+AGG | + | chr8.4:39220175-39220194 | None:intergenic | 35.0% |
| ! | CTTTTGTTGCGTCTATGTTT+CGG | - | chr8.4:39217066-39217085 | MS.gene99977:CDS | 35.0% |
| ! | GAGGTAAGTCTATTCCTTTT+TGG | - | chr8.4:39216544-39216563 | MS.gene99977:intron | 35.0% |
| ! | GTAGTTTGTGAGTGCATTTA+AGG | + | chr8.4:39217714-39217733 | None:intergenic | 35.0% |
| ! | GTGAAGCTTTGTATTGTATG+TGG | - | chr8.4:39220137-39220156 | MS.gene99977:intron | 35.0% |
| ! | TCTCAGTTTCTCAGTCTTAT+TGG | - | chr8.4:39216166-39216185 | MS.gene99977:CDS | 35.0% |
| ! | TTACACAAGAGACTGTTTCT+AGG | + | chr8.4:39218554-39218573 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr8.4:39221327-39221346 | MS.gene99977:intron | 35.0% |
| !! | AGATGGCTTTGTATGGAATA+AGG | - | chr8.4:39220277-39220296 | MS.gene99977:CDS | 35.0% |
| !! | AGCACATGTTATTTCAACGA+GGG | + | chr8.4:39220574-39220593 | None:intergenic | 35.0% |
| !! | AGTTTCTCAGTCTTATTGGA+AGG | - | chr8.4:39216170-39216189 | MS.gene99977:CDS | 35.0% |
| !! | GAAAGATTTTGAGAACATGG+TGG | - | chr8.4:39221902-39221921 | MS.gene99977:intron | 35.0% |
| !! | GGATTTTGAAAGAGTTGTTG+AGG | - | chr8.4:39221055-39221074 | MS.gene99977:intron | 35.0% |
| !! | TCTACTTTTCAAATGCAGGA+AGG | - | chr8.4:39216293-39216312 | MS.gene99977:intron | 35.0% |
| !! | TCTTGGTCCTTTTGTTTCTT+GGG | + | chr8.4:39220094-39220113 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr8.4:39221326-39221345 | None:intergenic | 35.0% |
| !! | TTGCTTTTGCCTTTTTACCT+TGG | - | chr8.4:39220598-39220617 | MS.gene99977:intron | 35.0% |
| !! | TTTTCCTTGTTTGCAAATGG+TGG | - | chr8.4:39219002-39219021 | MS.gene99977:intron | 35.0% |
| AAAAATAGTTCCACTTGGCC+AGG | + | chr8.4:39217818-39217837 | None:intergenic | 40.0% | |
| AAATGGGCCCAAGAAACAAA+AGG | - | chr8.4:39220084-39220103 | MS.gene99977:CDS | 40.0% | |
| AAGCTGTCATGGAGAACTTA+TGG | - | chr8.4:39217391-39217410 | MS.gene99977:intron | 40.0% | |
| ACCAATGGGTACATATTTGC+CGG | - | chr8.4:39219347-39219366 | MS.gene99977:intron | 40.0% | |
| AGCTGTCATGGAGAACTTAT+GGG | - | chr8.4:39217392-39217411 | MS.gene99977:intron | 40.0% | |
| AGTCATTTCCGCCAACTAAT+AGG | + | chr8.4:39219669-39219688 | None:intergenic | 40.0% | |
| AGTTTATAGGAGGAGAGAAG+GGG | - | chr8.4:39220030-39220049 | MS.gene99977:CDS | 40.0% | |
| ATGAACCTCTTAAACCATCC+AGG | - | chr8.4:39219967-39219986 | MS.gene99977:intron | 40.0% | |
| ATTTGTGGATGGTGCATTTC+TGG | - | chr8.4:39220313-39220332 | MS.gene99977:intron | 40.0% | |
| CAAAGAATGAAAAGCCTTCC+TGG | + | chr8.4:39219988-39220007 | None:intergenic | 40.0% | |
| CAAGAAACAAAAGGACCAAG+AGG | - | chr8.4:39220093-39220112 | MS.gene99977:CDS | 40.0% | |
| CAAGTTTATAGGAGGAGAGA+AGG | - | chr8.4:39220028-39220047 | MS.gene99977:CDS | 40.0% | |
| CACTCTCTTTGTCCTGTAAA+AGG | + | chr8.4:39219298-39219317 | None:intergenic | 40.0% | |
| CATAAGGGATAAAGAGTTGG+AGG | - | chr8.4:39216680-39216699 | MS.gene99977:intron | 40.0% | |
| CCCTAACTCTCCTCTAATTA+AGG | + | chr8.4:39219768-39219787 | None:intergenic | 40.0% | |
| CCCTTAATTAGAGGAGAGTT+AGG | - | chr8.4:39219764-39219783 | MS.gene99977:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr8.4:39218713-39218732 | MS.gene99977:intron | 40.0% | |
| CTTGATAAAGATCCTCACTC+TGG | - | chr8.4:39218285-39218304 | MS.gene99977:intron | 40.0% | |
| GAACACGCTTACAATCTGAA+AGG | + | chr8.4:39216983-39217002 | None:intergenic | 40.0% | |
| GAACATTCTCTTGGTCCTAA+CGG | - | chr8.4:39216522-39216541 | MS.gene99977:intron | 40.0% | |
| GAATAAAAAGGGTCAAGGCT+AGG | - | chr8.4:39219903-39219922 | MS.gene99977:intron | 40.0% | |
| GAGAGTTAGGGGAAATGTAT+TGG | - | chr8.4:39219777-39219796 | MS.gene99977:intron | 40.0% | |
| GAGATTAATGAGATGGACAG+GGG | - | chr8.4:39216806-39216825 | MS.gene99977:intron | 40.0% | |
| GATGACAATACTCCACGATT+TGG | - | chr8.4:39218881-39218900 | MS.gene99977:intron | 40.0% | |
| GCCAACTAATAGGATGAGTT+TGG | + | chr8.4:39219659-39219678 | None:intergenic | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | - | chr8.4:39218585-39218604 | MS.gene99977:intron | 40.0% | |
| GGACATGCAAGTATCATTTG+TGG | - | chr8.4:39220298-39220317 | MS.gene99977:intron | 40.0% | |
| GGCCCAAAATGCAAGTTTAT+AGG | - | chr8.4:39220017-39220036 | MS.gene99977:CDS | 40.0% | |
| GTGTAATCACGCAGAACTAT+TGG | + | chr8.4:39216921-39216940 | None:intergenic | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | chr8.4:39218588-39218607 | MS.gene99977:intron | 40.0% | |
| GTGTTTGGGCAAGTAGTAAT+TGG | - | chr8.4:39216103-39216122 | MS.gene99977:CDS | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr8.4:39218514-39218533 | MS.gene99977:intron | 40.0% | |
| TGAAGGCTGCAACAATGAAA+TGG | + | chr8.4:39218215-39218234 | None:intergenic | 40.0% | |
| TGTTAGTGTTTCAGAGGTGA+TGG | - | chr8.4:39217119-39217138 | MS.gene99977:CDS | 40.0% | |
| TTCACTTGTGTTGTACAAGC+AGG | - | chr8.4:39217566-39217585 | MS.gene99977:intron | 40.0% | |
| TTGGCACACAGATTAAGGAA+TGG | + | chr8.4:39221301-39221320 | None:intergenic | 40.0% | |
| TTTGTCTTGTCTATGCTGAG+GGG | - | chr8.4:39218469-39218488 | MS.gene99977:intron | 40.0% | |
| ! | ACACATTTGAAGTGTAGGCA+TGG | - | chr8.4:39216937-39216956 | MS.gene99977:CDS | 40.0% |
| ! | AGCAGGTCTTGTATACTGTA+TGG | - | chr8.4:39217583-39217602 | MS.gene99977:intron | 40.0% |
| ! | CACATTTGAAGTGTAGGCAT+GGG | - | chr8.4:39216938-39216957 | MS.gene99977:CDS | 40.0% |
| ! | GAAGGTTGCTGTTGTCAATT+TGG | - | chr8.4:39216311-39216330 | MS.gene99977:intron | 40.0% |
| ! | TAACAACTGATTCACGAGTC+TGG | + | chr8.4:39220255-39220274 | None:intergenic | 40.0% |
| ! | TACAGGACAAAGAGAGTGTA+GGG | - | chr8.4:39219300-39219319 | MS.gene99977:intron | 40.0% |
| ! | TGGGTGATGGTATATAGCAT+CGG | - | chr8.4:39216957-39216976 | MS.gene99977:CDS | 40.0% |
| ! | TTACAGGACAAAGAGAGTGT+AGG | - | chr8.4:39219299-39219318 | MS.gene99977:intron | 40.0% |
| !! | AATTCAAATGGTGGGCAAGA+GGG | + | chr8.4:39220734-39220753 | None:intergenic | 40.0% |
| !! | CAGCACATGTTATTTCAACG+AGG | + | chr8.4:39220575-39220594 | None:intergenic | 40.0% |
| !! | CGTCTATGTTTCGGTGTTAA+TGG | - | chr8.4:39217075-39217094 | MS.gene99977:CDS | 40.0% |
| !! | CTCTTGGTCCTTTTGTTTCT+TGG | + | chr8.4:39220095-39220114 | None:intergenic | 40.0% |
| !! | GCACATGTTATTTCAACGAG+GGG | + | chr8.4:39220573-39220592 | None:intergenic | 40.0% |
| !! | GCTGTTTTCTTCCTTTGTCT+TGG | - | chr8.4:39220772-39220791 | MS.gene99977:intron | 40.0% |
| !! | TAATTCAAATGGTGGGCAAG+AGG | + | chr8.4:39220735-39220754 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.4:39221331-39221350 | MS.gene99977:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.4:39221350-39221331 | None:intergenic | 40.0% |
| !!! | GTCTGGTTTTCTCATCCTTA+TGG | - | chr8.4:39221876-39221895 | MS.gene99977:intron | 40.0% |
| AAACTTAGTGTCCAGGAGAG+TGG | + | chr8.4:39221618-39221637 | None:intergenic | 45.0% | |
| AAAGGACCAAGAGGGTTCTT+AGG | - | chr8.4:39220184-39220203 | MS.gene99977:intron | 45.0% | |
| ACCTCTTAAACCATCCAGGA+AGG | - | chr8.4:39219971-39219990 | MS.gene99977:intron | 45.0% | |
| AGTATAAGGGAACGACCACT+TGG | - | chr8.4:39221755-39221774 | MS.gene99977:CDS | 45.0% | |
| ATCCTCACTCTGGTAAGTAC+AGG | - | chr8.4:39218295-39218314 | MS.gene99977:intron | 45.0% | |
| ATTGAGAGCTACGGAAAGCT+AGG | - | chr8.4:39218106-39218125 | MS.gene99977:intron | 45.0% | |
| ATTGTGGGGGGTAGTTCATA+AGG | - | chr8.4:39216664-39216683 | MS.gene99977:intron | 45.0% | |
| ATTTCAACGAGGGGCAAAGA+TGG | + | chr8.4:39220564-39220583 | None:intergenic | 45.0% | |
| CAAGTAGTAATTGGTCCTCC+TGG | - | chr8.4:39216112-39216131 | MS.gene99977:CDS | 45.0% | |
| CGTACAACAAAATGCGTACG+AGG | - | chr8.4:39221980-39221999 | MS.gene99977:CDS | 45.0% | |
| CTTATCCCACTAAGTGGGAT+CGG | + | chr8.4:39216876-39216895 | None:intergenic | 45.0% | |
| GAATGAAAAGCCTTCCTGGA+TGG | + | chr8.4:39219984-39220003 | None:intergenic | 45.0% | |
| GACTAAATGTACCTGCCTAC+CGG | + | chr8.4:39221412-39221431 | None:intergenic | 45.0% | |
| GATCGGCTACATGGATCAAA+CGG | + | chr8.4:39216859-39216878 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr8.4:39218712-39218731 | MS.gene99977:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr8.4:39218709-39218728 | MS.gene99977:intron | 45.0% | |
| GGAATAGACTTACCTCCGTT+AGG | + | chr8.4:39216540-39216559 | None:intergenic | 45.0% | |
| GTTGCCGTGGAAGAATATGA+AGG | - | chr8.4:39221161-39221180 | MS.gene99977:intron | 45.0% | |
| TAAAAGAGCAAAGGGCAACC+CGG | + | chr8.4:39218779-39218798 | None:intergenic | 45.0% | |
| TACCATAGGTACTTCGCTCA+TGG | - | chr8.4:39220217-39220236 | MS.gene99977:CDS | 45.0% | |
| TCATGTGACTGAAAGGTCAC+AGG | - | chr8.4:39218521-39218540 | MS.gene99977:intron | 45.0% | |
| TGTTATAAGGCCACCCTTTG+AGG | - | chr8.4:39221449-39221468 | MS.gene99977:intron | 45.0% | |
| TGTTGTACGAGCCTGGAATT+AGG | + | chr8.4:39221969-39221988 | None:intergenic | 45.0% | |
| TTGTGGGGGGTAGTTCATAA+GGG | - | chr8.4:39216665-39216684 | MS.gene99977:intron | 45.0% | |
| TTTCGTCCGGGTTTAAACTC+AGG | + | chr8.4:39216707-39216726 | None:intergenic | 45.0% | |
| ! | AATGCACTGATGTACTTCCC+AGG | + | chr8.4:39218016-39218035 | None:intergenic | 45.0% |
| ! | AGGCTTTGGCACACAGATTA+AGG | + | chr8.4:39221306-39221325 | None:intergenic | 45.0% |
| ! | ATGCACTGATGTACTTCCCA+GGG | + | chr8.4:39218015-39218034 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr8.4:39216881-39216900 | None:intergenic | 45.0% |
| ! | TACAGGTGTGCTTTGTTGTG+TGG | - | chr8.4:39218312-39218331 | MS.gene99977:intron | 45.0% |
| ! | TACCATGAGCGAAGTACCTA+TGG | + | chr8.4:39220222-39220241 | None:intergenic | 45.0% |
| ! | TTTGGAGTCCATAGCAGTGT+AGG | + | chr8.4:39219641-39219660 | None:intergenic | 45.0% |
| !! | ATGAGTGTCGCTTTAGGCTT+TGG | + | chr8.4:39221320-39221339 | None:intergenic | 45.0% |
| !! | ATGTTTCGGTGTTAATGGCG+TGG | - | chr8.4:39217080-39217099 | MS.gene99977:CDS | 45.0% |
| !! | CTTTGATTTTCCTGGCCAAG+TGG | - | chr8.4:39217805-39217824 | MS.gene99977:intron | 45.0% |
| !! | TAAGTTGTTTTGCCAGAGCC+AGG | + | chr8.4:39216133-39216152 | None:intergenic | 45.0% |
| !! | TTTTGAGAGAGCTGCAGAAG+AGG | - | chr8.4:39220941-39220960 | MS.gene99977:intron | 45.0% |
| !!! | ACTCATTTTGAAACGGAGGG+AGG | + | chr8.4:39221353-39221334 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8.4:39221330-39221349 | MS.gene99977:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.4:39221349-39221330 | None:intergenic | 45.0% |
| !!! | TTTTTTTCTGGCCACTCTCC+TGG | - | chr8.4:39221604-39221623 | MS.gene99977:CDS | 45.0% |
| !! | TAAATAATTAAATAATAGTA+AGG | - | chr8.4:39221235-39221254 | MS.gene99977:intron | 5.0% |
| !!! | TTATCTTTTTAATTAAATTT+CGG | - | chr8.4:39216224-39216243 | MS.gene99977:CDS | 5.0% |
| AAAAAGGGTCAAGGCTAGGG+AGG | - | chr8.4:39219907-39219926 | MS.gene99977:intron | 50.0% | |
| AACCGCACTTGCATCTATGC+CGG | + | chr8.4:39219369-39219388 | None:intergenic | 50.0% | |
| ACTAAGTGGGATCGGCTACA+TGG | + | chr8.4:39216868-39216887 | None:intergenic | 50.0% | |
| ACTTCCCAGGGTCACTACAA+AGG | + | chr8.4:39218003-39218022 | None:intergenic | 50.0% | |
| AGGATCTGACATGACCCTCT+TGG | + | chr8.4:39220111-39220130 | None:intergenic | 50.0% | |
| AGTTGCCTCCTACACTGCTA+TGG | - | chr8.4:39219630-39219649 | MS.gene99977:intron | 50.0% | |
| ATGTAGCCGATCCCACTTAG+TGG | - | chr8.4:39216867-39216886 | MS.gene99977:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8.4:39218498-39218517 | None:intergenic | 50.0% | |
| CACCTGTACTTACCAGAGTG+AGG | + | chr8.4:39218300-39218319 | None:intergenic | 50.0% | |
| CATTCTCTTGGTCCTAACGG+AGG | - | chr8.4:39216525-39216544 | MS.gene99977:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr8.4:39216879-39216898 | MS.gene99977:intron | 50.0% | |
| CGATCCCACTTAGTGGGATA+AGG | - | chr8.4:39216874-39216893 | MS.gene99977:intron | 50.0% | |
| CTCACCTTTGTAGTGACCCT+GGG | - | chr8.4:39217996-39218015 | MS.gene99977:intron | 50.0% | |
| GCAGTTAACGGCAGTGCATT+TGG | - | chr8.4:39217967-39217986 | MS.gene99977:intron | 50.0% | |
| GCCGGCAAATATGTACCCAT+TGG | + | chr8.4:39219351-39219370 | None:intergenic | 50.0% | |
| GCCTTCCTGGATGGTTTAAG+AGG | + | chr8.4:39219975-39219994 | None:intergenic | 50.0% | |
| GGAGGTCCTGAGTTTAAACC+CGG | - | chr8.4:39216698-39216717 | MS.gene99977:intron | 50.0% | |
| GTCAAGCCTAAGAACCCTCT+TGG | + | chr8.4:39220193-39220212 | None:intergenic | 50.0% | |
| TAAAAGGGCAAAGGGCAACC+CGG | + | chr8.4:39218655-39218674 | None:intergenic | 50.0% | |
| TAGGCTTGACGAGCTACCAT+AGG | - | chr8.4:39220203-39220222 | MS.gene99977:intron | 50.0% | |
| TCTATGCTGAGGGGTAACCT+TGG | - | chr8.4:39218478-39218497 | MS.gene99977:intron | 50.0% | |
| TGAAGTGTAGGCATGGGTGA+TGG | - | chr8.4:39216944-39216963 | MS.gene99977:CDS | 50.0% | |
| TGCTATGGGAGCTCCTGATT+GGG | - | chr8.4:39219403-39219422 | MS.gene99977:intron | 50.0% | |
| TGTAGCCGATCCCACTTAGT+GGG | - | chr8.4:39216868-39216887 | MS.gene99977:intron | 50.0% | |
| TTGCTATGGGAGCTCCTGAT+TGG | - | chr8.4:39219402-39219421 | MS.gene99977:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr8.4:39216882-39216901 | None:intergenic | 50.0% |
| ! | CTAGGAGCTGTGACTAGTTC+CGG | - | chr8.4:39221390-39221409 | MS.gene99977:intron | 50.0% |
| !! | CGCATTTTGTTGTACGAGCC+TGG | + | chr8.4:39221976-39221995 | None:intergenic | 50.0% |
| !!! | GGATTTTGAGGTAGTTGCCG+TGG | - | chr8.4:39221148-39221167 | MS.gene99977:intron | 50.0% |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr8.4:39218629-39218648 | None:intergenic | 55.0% | |
| ACTATCGTCGTGACAGCGTC+TGG | - | chr8.4:39221859-39221878 | MS.gene99977:intron | 55.0% | |
| CATATGCAGGGTCTGGGAAG+GGG | + | chr8.4:39218616-39218635 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr8.4:39218628-39218647 | None:intergenic | 55.0% | |
| CTTCCCAGACCCTGCATATG+CGG | - | chr8.4:39218616-39218635 | MS.gene99977:intron | 55.0% | |
| GCATATGCAGGGTCTGGGAA+GGG | + | chr8.4:39218617-39218636 | None:intergenic | 55.0% | |
| GCTCACCTTTGTAGTGACCC+TGG | - | chr8.4:39217995-39218014 | MS.gene99977:intron | 55.0% | |
| GGAGTCCATAGCAGTGTAGG+AGG | + | chr8.4:39219638-39219657 | None:intergenic | 55.0% | |
| GGTCAAGGCTAGGGAGGAAA+GGG | - | chr8.4:39219913-39219932 | MS.gene99977:intron | 55.0% | |
| GTAATTGGTCCTCCTGGCTC+TGG | - | chr8.4:39216118-39216137 | MS.gene99977:CDS | 55.0% | |
| TGCCGGCATAGATGCAAGTG+CGG | - | chr8.4:39219364-39219383 | MS.gene99977:intron | 55.0% | |
| TTCCCAGACCCTGCATATGC+GGG | - | chr8.4:39218617-39218636 | MS.gene99977:intron | 55.0% | |
| ! | GAGCTGTGACTAGTTCCGGT+AGG | - | chr8.4:39221394-39221413 | MS.gene99977:intron | 55.0% |
| ! | TGTGACTAGTTCCGGTAGGC+AGG | - | chr8.4:39221398-39221417 | MS.gene99977:intron | 55.0% |
| !! | CAAATGGTGGGCAAGAGGGA+AGG | + | chr8.4:39220730-39220749 | None:intergenic | 55.0% |
| !! | GTTGTTTTGCCAGAGCCAGG+AGG | + | chr8.4:39216130-39216149 | None:intergenic | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8.4:39218487-39218506 | MS.gene99977:intron | 60.0% | |
| CGCATATGCAGGGTCTGGGA+AGG | + | chr8.4:39218618-39218637 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGGGTCT+GGG | + | chr8.4:39218622-39218641 | None:intergenic | 60.0% | |
| GGGTCAAGGCTAGGGAGGAA+AGG | - | chr8.4:39219912-39219931 | MS.gene99977:intron | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | + | chr8.4:39218603-39218622 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr8.4:39218633-39218652 | MS.gene99977:intron | 60.0% |
| GCTCCCGCATATGCAGGGTC+TGG | + | chr8.4:39218623-39218642 | None:intergenic | 65.0% | |
| ! | GAGAGAAGGGGCGTGACTCG+TGG | - | chr8.4:39220042-39220061 | MS.gene99977:CDS | 65.0% |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr8.4:39218634-39218653 | MS.gene99977:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 39216100 | 39222007 | 39216100 | ID=MS.gene99977 |
| chr8.4 | mRNA | 39216100 | 39222007 | 39216100 | ID=MS.gene99977.t1;Parent=MS.gene99977 |
| chr8.4 | exon | 39221916 | 39222007 | 39221916 | ID=MS.gene99977.t1.exon1;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39221916 | 39222007 | 39221916 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39221752 | 39221796 | 39221752 | ID=MS.gene99977.t1.exon2;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39221752 | 39221796 | 39221752 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39221561 | 39221640 | 39221561 | ID=MS.gene99977.t1.exon3;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39221561 | 39221640 | 39221561 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39220445 | 39220519 | 39220445 | ID=MS.gene99977.t1.exon4;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39220445 | 39220519 | 39220445 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39220212 | 39220315 | 39220212 | ID=MS.gene99977.t1.exon5;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39220212 | 39220315 | 39220212 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39219980 | 39220136 | 39219980 | ID=MS.gene99977.t1.exon6;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39219980 | 39220136 | 39219980 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39219791 | 39219878 | 39219791 | ID=MS.gene99977.t1.exon7;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39219791 | 39219878 | 39219791 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39218884 | 39218956 | 39218884 | ID=MS.gene99977.t1.exon8;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39218884 | 39218956 | 39218884 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39218722 | 39218802 | 39218722 | ID=MS.gene99977.t1.exon9;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39218722 | 39218802 | 39218722 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39216925 | 39217267 | 39216925 | ID=MS.gene99977.t1.exon10;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39216925 | 39217267 | 39216925 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| chr8.4 | exon | 39216100 | 39216254 | 39216100 | ID=MS.gene99977.t1.exon11;Parent=MS.gene99977.t1 |
| chr8.4 | CDS | 39216100 | 39216254 | 39216100 | ID=cds.MS.gene99977.t1;Parent=MS.gene99977.t1 |
| Gene Sequence |
| Protein sequence |
