Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037094.01.T01 | XP_013447911.1 | 99.085 | 437 | 4 | 0 | 1 | 437 | 1 | 437 | 0 | 899 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037094.01.T01 | Q94CD1 | 72.979 | 433 | 111 | 4 | 11 | 437 | 25 | 457 | 0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037094.01.T01 | A0A072TYM0 | 99.085 | 437 | 4 | 0 | 1 | 437 | 1 | 437 | 0.0 | 899 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048302.01 | MsG0780037094.01 | 0.803812 | 2.915575e-49 | 1.479309e-46 |
| MsG0180000479.01 | MsG0780037094.01 | 0.843756 | 1.152034e-58 | 1.820545e-55 |
| MsG0180001104.01 | MsG0780037094.01 | 0.851932 | 6.429157e-61 | 1.321724e-57 |
| MsG0180002912.01 | MsG0780037094.01 | 0.804659 | 1.943041e-49 | 1.007556e-46 |
| MsG0180003948.01 | MsG0780037094.01 | 0.824414 | 8.177806e-54 | 7.237977e-51 |
| MsG0180003955.01 | MsG0780037094.01 | 0.820005 | 8.618264e-53 | 6.738108e-50 |
| MsG0180004495.01 | MsG0780037094.01 | 0.841846 | 3.709535e-58 | 5.520493e-55 |
| MsG0180004752.01 | MsG0780037094.01 | 0.814361 | 1.602253e-51 | 1.072826e-48 |
| MsG0180004949.01 | MsG0780037094.01 | 0.890082 | 1.358646e-73 | 1.125477e-69 |
| MsG0180006226.01 | MsG0780037094.01 | -0.828567 | 8.367133e-55 | 8.348142e-52 |
| MsG0280011288.01 | MsG0780037094.01 | 0.802960 | 4.378725e-49 | 2.173578e-46 |
| MsG0280011399.01 | MsG0780037094.01 | 0.855350 | 6.693240e-62 | 1.541015e-58 |
| MsG0380013118.01 | MsG0780037094.01 | 0.860004 | 2.793784e-63 | 7.524239e-60 |
| MsG0380014754.01 | MsG0780037094.01 | 0.813418 | 2.585883e-51 | 1.687803e-48 |
| MsG0680031384.01 | MsG0780037094.01 | 0.816026 | 6.836415e-52 | 4.790004e-49 |
| MsG0680031386.01 | MsG0780037094.01 | 0.808259 | 3.381646e-50 | 1.924563e-47 |
| MsG0680032489.01 | MsG0780037094.01 | 0.806018 | 1.008447e-49 | 5.415389e-47 |
| MsG0480018998.01 | MsG0780037094.01 | 0.800532 | 1.378858e-48 | 6.435617e-46 |
| MsG0480019038.01 | MsG0780037094.01 | 0.806966 | 6.362785e-50 | 3.500721e-47 |
| MsG0480020263.01 | MsG0780037094.01 | 0.801915 | 7.186933e-49 | 3.473950e-46 |
| MsG0480021225.01 | MsG0780037094.01 | 0.802806 | 4.709409e-49 | 2.328792e-46 |
| MsG0480021705.01 | MsG0780037094.01 | 0.875323 | 3.373110e-68 | 1.568158e-64 |
| MsG0480022479.01 | MsG0780037094.01 | 0.814499 | 1.493471e-51 | 1.003830e-48 |
| MsG0480022480.01 | MsG0780037094.01 | 0.804832 | 1.787700e-49 | 9.312115e-47 |
| MsG0480022486.01 | MsG0780037094.01 | 0.804900 | 1.729679e-49 | 9.026320e-47 |
| MsG0480022987.01 | MsG0780037094.01 | 0.800926 | 1.146190e-48 | 5.403607e-46 |
| MsG0480023196.01 | MsG0780037094.01 | 0.829121 | 6.146140e-55 | 6.232050e-52 |
| MsG0480023421.01 | MsG0780037094.01 | 0.818530 | 1.868308e-52 | 1.402092e-49 |
| MsG0480023903.01 | MsG0780037094.01 | 0.823336 | 1.462993e-53 | 1.256013e-50 |
| MsG0580024035.01 | MsG0780037094.01 | 0.806622 | 7.522802e-50 | 4.102173e-47 |
| MsG0580025822.01 | MsG0780037094.01 | 0.822909 | 1.840732e-53 | 1.561473e-50 |
| MsG0380015731.01 | MsG0780037094.01 | 0.805390 | 1.365965e-49 | 7.217724e-47 |
| MsG0380016018.01 | MsG0780037094.01 | 0.803110 | 4.075524e-49 | 2.030802e-46 |
| MsG0380016968.01 | MsG0780037094.01 | 0.816292 | 5.961354e-52 | 4.207617e-49 |
| MsG0480018230.01 | MsG0780037094.01 | 0.806629 | 7.496200e-50 | 4.088382e-47 |
| MsG0480018256.01 | MsG0780037094.01 | 0.806064 | 9.862586e-50 | 5.302454e-47 |
| MsG0480018391.01 | MsG0780037094.01 | 0.839236 | 1.787603e-57 | 2.453404e-54 |
| MsG0580027129.01 | MsG0780037094.01 | 0.814896 | 1.219699e-51 | 8.285388e-49 |
| MsG0580028924.01 | MsG0780037094.01 | 0.816807 | 4.571981e-52 | 3.272393e-49 |
| MsG0580029930.01 | MsG0780037094.01 | 0.801496 | 8.762949e-49 | 4.191012e-46 |
| MsG0680030436.01 | MsG0780037094.01 | 0.833502 | 5.140271e-56 | 5.930808e-53 |
| MsG0680030529.01 | MsG0780037094.01 | 0.800643 | 1.308724e-48 | 6.125639e-46 |
| MsG0280006485.01 | MsG0780037094.01 | 0.812204 | 4.769380e-51 | 3.013423e-48 |
| MsG0280006586.01 | MsG0780037094.01 | 0.812054 | 5.141985e-51 | 3.235458e-48 |
| MsG0280007609.01 | MsG0780037094.01 | 0.822291 | 2.562975e-53 | 2.136310e-50 |
| MsG0280007686.01 | MsG0780037094.01 | 0.810661 | 1.031857e-50 | 6.257062e-48 |
| MsG0280008856.01 | MsG0780037094.01 | 0.815423 | 9.314998e-52 | 6.419656e-49 |
| MsG0280009241.01 | MsG0780037094.01 | 0.802364 | 5.809225e-49 | 2.840463e-46 |
| MsG0280009416.01 | MsG0780037094.01 | 0.842583 | 2.367179e-58 | 3.605528e-55 |
| MsG0280009514.01 | MsG0780037094.01 | 0.815416 | 9.351336e-52 | 6.443229e-49 |
| MsG0280010296.01 | MsG0780037094.01 | 0.840603 | 7.872028e-58 | 1.127011e-54 |
| MsG0280010389.01 | MsG0780037094.01 | 0.804044 | 2.609385e-49 | 1.331881e-46 |
| MsG0280010502.01 | MsG0780037094.01 | 0.819975 | 8.755114e-53 | 6.839415e-50 |
| MsG0780036235.01 | MsG0780037094.01 | 0.812233 | 4.698784e-51 | 2.971254e-48 |
| MsG0780036852.01 | MsG0780037094.01 | 0.808374 | 3.195667e-50 | 1.824210e-47 |
| MsG0780037094.01 | MsG0780039430.01 | 0.863089 | 3.191330e-64 | 9.558515e-61 |
| MsG0780037094.01 | MsG0780040480.01 | 0.806109 | 9.647679e-50 | 5.192851e-47 |
| MsG0780037094.01 | MsG0780041641.01 | 0.817502 | 3.189845e-52 | 2.327144e-49 |
| MsG0780037094.01 | MsG0880041883.01 | 0.814074 | 1.853955e-51 | 1.231798e-48 |
| MsG0780037094.01 | MsG0880042059.01 | 0.806981 | 6.317039e-50 | 3.476959e-47 |
| MsG0780037094.01 | MsG0880043262.01 | 0.853427 | 2.406438e-61 | 5.198384e-58 |
| MsG0780037094.01 | MsG0880043921.01 | 0.800832 | 1.197848e-48 | 5.633537e-46 |
| MsG0780037094.01 | MsG0880043959.01 | 0.821322 | 4.294888e-53 | 3.482815e-50 |
| MsG0780037094.01 | MsG0880043989.01 | 0.816583 | 5.131671e-52 | 3.650622e-49 |
| MsG0780037094.01 | MsG0880044510.01 | 0.803829 | 2.892389e-49 | 1.468192e-46 |
| MsG0780037094.01 | MsG0880045099.01 | 0.823457 | 1.370708e-53 | 1.180835e-50 |
| MsG0780037094.01 | MsG0880045256.01 | 0.800562 | 1.359726e-48 | 6.351142e-46 |
| MsG0780037094.01 | MsG0880045790.01 | 0.891481 | 3.820980e-74 | 3.356125e-70 |
| MsG0780037094.01 | MsG0880046317.01 | 0.801249 | 9.841834e-49 | 4.677891e-46 |
| MsG0780037094.01 | MsG0880046467.01 | 0.822287 | 2.567454e-53 | 2.139847e-50 |
| MsG0780037094.01 | MsG0880046762.01 | 0.826011 | 3.427253e-54 | 3.175462e-51 |
| MsG0780037094.01 | MsG0880046889.01 | 0.831414 | 1.692027e-55 | 1.834769e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0080048866.01 | MsG0780037094.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037094.01.T01 | MTR_7g027175 | 99.085 | 437 | 4 | 0 | 1 | 437 | 1 | 437 | 0.0 | 899 |
| MsG0780037094.01.T01 | MTR_3g098980 | 66.587 | 419 | 137 | 2 | 20 | 437 | 18 | 434 | 0.0 | 586 |
| MsG0780037094.01.T01 | MTR_8g096530 | 61.682 | 428 | 159 | 3 | 12 | 437 | 4 | 428 | 0.0 | 539 |
| MsG0780037094.01.T01 | MTR_4g007540 | 34.483 | 435 | 266 | 7 | 13 | 435 | 3 | 430 | 5.92e-85 | 267 |
| MsG0780037094.01.T01 | MTR_2g105330 | 34.475 | 438 | 261 | 9 | 13 | 435 | 3 | 429 | 2.80e-83 | 262 |
| MsG0780037094.01.T01 | MTR_2g064495 | 34.247 | 438 | 262 | 9 | 13 | 435 | 3 | 429 | 3.10e-82 | 259 |
| MsG0780037094.01.T01 | MTR_8g075610 | 34.597 | 422 | 262 | 8 | 23 | 435 | 1 | 417 | 2.81e-79 | 252 |
| MsG0780037094.01.T01 | MTR_5g076700 | 35.659 | 387 | 235 | 8 | 20 | 397 | 14 | 395 | 9.99e-77 | 246 |
| MsG0780037094.01.T01 | MTR_1g081660 | 34.419 | 430 | 255 | 11 | 19 | 431 | 21 | 440 | 2.01e-75 | 243 |
| MsG0780037094.01.T01 | MTR_1g053315 | 36.250 | 400 | 231 | 15 | 36 | 416 | 41 | 435 | 4.27e-74 | 239 |
| MsG0780037094.01.T01 | MTR_1g040175 | 33.333 | 423 | 264 | 10 | 20 | 429 | 13 | 430 | 2.49e-72 | 235 |
| MsG0780037094.01.T01 | MTR_7g114520 | 32.639 | 432 | 265 | 10 | 20 | 433 | 15 | 438 | 2.62e-72 | 235 |
| MsG0780037094.01.T01 | MTR_7g114470 | 34.109 | 387 | 240 | 8 | 19 | 395 | 14 | 395 | 3.49e-72 | 234 |
| MsG0780037094.01.T01 | MTR_1g040215 | 33.596 | 381 | 241 | 8 | 23 | 396 | 16 | 391 | 3.89e-71 | 232 |
| MsG0780037094.01.T01 | MTR_7g084940 | 30.588 | 425 | 278 | 7 | 22 | 435 | 22 | 440 | 1.10e-68 | 225 |
| MsG0780037094.01.T01 | MTR_7g114550 | 32.637 | 383 | 247 | 5 | 20 | 395 | 14 | 392 | 1.26e-68 | 225 |
| MsG0780037094.01.T01 | MTR_7g114490 | 32.812 | 384 | 247 | 6 | 19 | 395 | 13 | 392 | 2.74e-67 | 223 |
| MsG0780037094.01.T01 | MTR_1g040195 | 33.508 | 382 | 223 | 8 | 19 | 396 | 12 | 366 | 5.33e-66 | 218 |
| MsG0780037094.01.T01 | MTR_7g114560 | 31.593 | 383 | 251 | 6 | 20 | 395 | 14 | 392 | 9.26e-66 | 218 |
| MsG0780037094.01.T01 | MTR_3g112180 | 32.715 | 431 | 259 | 13 | 22 | 436 | 18 | 433 | 4.38e-65 | 216 |
| MsG0780037094.01.T01 | MTR_3g049150 | 31.579 | 437 | 271 | 10 | 24 | 435 | 10 | 443 | 6.71e-64 | 213 |
| MsG0780037094.01.T01 | MTR_3g026950 | 30.543 | 442 | 267 | 12 | 24 | 432 | 10 | 444 | 1.54e-63 | 212 |
| MsG0780037094.01.T01 | MTR_7g056087 | 31.250 | 432 | 277 | 9 | 20 | 435 | 8 | 435 | 2.56e-61 | 205 |
| MsG0780037094.01.T01 | MTR_1g040320 | 31.250 | 384 | 216 | 8 | 20 | 396 | 13 | 355 | 2.69e-61 | 205 |
| MsG0780037094.01.T01 | MTR_7g084910 | 30.935 | 417 | 255 | 11 | 22 | 426 | 23 | 418 | 4.43e-61 | 205 |
| MsG0780037094.01.T01 | MTR_4g055170 | 32.287 | 446 | 269 | 15 | 18 | 436 | 14 | 453 | 2.12e-60 | 204 |
| MsG0780037094.01.T01 | MTR_4g127650 | 31.881 | 436 | 266 | 9 | 24 | 432 | 18 | 449 | 8.34e-59 | 199 |
| MsG0780037094.01.T01 | MTR_1g040315 | 32.021 | 381 | 212 | 10 | 21 | 396 | 14 | 352 | 8.79e-56 | 190 |
| MsG0780037094.01.T01 | MTR_3g071320 | 31.481 | 432 | 274 | 11 | 20 | 436 | 9 | 433 | 1.38e-55 | 190 |
| MsG0780037094.01.T01 | MTR_4g097090 | 29.777 | 403 | 244 | 9 | 24 | 395 | 17 | 411 | 3.91e-49 | 174 |
| MsG0780037094.01.T01 | MTR_7g086000 | 30.310 | 419 | 240 | 16 | 13 | 391 | 2 | 408 | 1.27e-46 | 167 |
| MsG0780037094.01.T01 | MTR_2g015430 | 29.540 | 413 | 272 | 12 | 39 | 437 | 29 | 436 | 4.53e-45 | 162 |
| MsG0780037094.01.T01 | MTR_3g465990 | 31.421 | 401 | 228 | 17 | 23 | 392 | 17 | 401 | 9.18e-45 | 162 |
| MsG0780037094.01.T01 | MTR_3g465930 | 32.500 | 400 | 229 | 15 | 23 | 392 | 17 | 405 | 1.62e-44 | 161 |
| MsG0780037094.01.T01 | MTR_3g465980 | 31.920 | 401 | 226 | 19 | 23 | 392 | 17 | 401 | 3.70e-43 | 157 |
| MsG0780037094.01.T01 | MTR_3g465910 | 32.250 | 400 | 227 | 15 | 23 | 392 | 17 | 402 | 4.14e-43 | 159 |
| MsG0780037094.01.T01 | MTR_0502s0010 | 36.250 | 240 | 141 | 6 | 104 | 338 | 1 | 233 | 5.16e-43 | 151 |
| MsG0780037094.01.T01 | MTR_6g053810 | 31.635 | 373 | 229 | 12 | 38 | 392 | 42 | 406 | 7.17e-43 | 157 |
| MsG0780037094.01.T01 | MTR_7g114510 | 30.169 | 295 | 192 | 6 | 149 | 433 | 6 | 296 | 7.71e-41 | 148 |
| MsG0780037094.01.T01 | MTR_4g013050 | 25.113 | 442 | 273 | 11 | 14 | 435 | 3 | 406 | 8.01e-41 | 150 |
| MsG0780037094.01.T01 | MTR_7g085990 | 28.646 | 384 | 232 | 10 | 51 | 396 | 37 | 416 | 2.31e-39 | 147 |
| MsG0780037094.01.T01 | MTR_3g465950 | 34.416 | 308 | 184 | 11 | 65 | 360 | 65 | 366 | 7.38e-39 | 146 |
| MsG0780037094.01.T01 | MTR_7g085930 | 28.535 | 396 | 217 | 12 | 51 | 396 | 41 | 420 | 9.69e-39 | 146 |
| MsG0780037094.01.T01 | MTR_3g465880 | 28.222 | 450 | 283 | 16 | 23 | 436 | 17 | 462 | 5.10e-38 | 144 |
| MsG0780037094.01.T01 | MTR_7g110610 | 30.102 | 392 | 192 | 15 | 23 | 397 | 12 | 338 | 8.35e-35 | 133 |
| MsG0780037094.01.T01 | MTR_3g086020 | 26.866 | 402 | 247 | 15 | 23 | 408 | 12 | 382 | 4.35e-34 | 132 |
| MsG0780037094.01.T01 | MTR_5g090810 | 27.877 | 391 | 240 | 13 | 37 | 393 | 31 | 413 | 7.39e-33 | 129 |
| MsG0780037094.01.T01 | MTR_0042s0190 | 31.034 | 232 | 149 | 7 | 169 | 395 | 1 | 226 | 1.01e-32 | 125 |
| MsG0780037094.01.T01 | MTR_5g090830 | 27.621 | 391 | 241 | 13 | 37 | 393 | 31 | 413 | 5.72e-32 | 127 |
| MsG0780037094.01.T01 | MTR_3g101960 | 30.159 | 315 | 194 | 10 | 56 | 356 | 56 | 358 | 7.14e-30 | 121 |
| MsG0780037094.01.T01 | MTR_3g101930 | 27.094 | 406 | 251 | 16 | 55 | 432 | 57 | 445 | 5.91e-28 | 115 |
| MsG0780037094.01.T01 | MTR_4g094828 | 26.980 | 404 | 248 | 17 | 58 | 429 | 49 | 437 | 5.17e-27 | 112 |
| MsG0780037094.01.T01 | MTR_5g090880 | 25.118 | 422 | 269 | 15 | 9 | 393 | 4 | 415 | 2.35e-26 | 111 |
| MsG0780037094.01.T01 | MTR_0190s0020 | 25.450 | 389 | 259 | 10 | 63 | 433 | 58 | 433 | 4.15e-26 | 110 |
| MsG0780037094.01.T01 | MTR_3g101900 | 25.062 | 403 | 260 | 12 | 55 | 432 | 53 | 438 | 4.75e-26 | 110 |
| MsG0780037094.01.T01 | MTR_3g102020 | 28.338 | 367 | 227 | 13 | 14 | 356 | 5 | 359 | 5.62e-26 | 110 |
| MsG0780037094.01.T01 | MTR_4g094842 | 26.485 | 404 | 255 | 14 | 54 | 429 | 46 | 435 | 7.17e-26 | 109 |
| MsG0780037094.01.T01 | MTR_3g101970 | 29.677 | 310 | 188 | 11 | 56 | 356 | 57 | 345 | 7.66e-26 | 109 |
| MsG0780037094.01.T01 | MTR_3g088420 | 25.897 | 390 | 266 | 12 | 63 | 437 | 50 | 431 | 3.28e-25 | 107 |
| MsG0780037094.01.T01 | MTR_3g465870 | 31.310 | 313 | 189 | 12 | 9 | 302 | 2 | 307 | 4.32e-25 | 107 |
| MsG0780037094.01.T01 | MTR_3g049140 | 32.057 | 209 | 124 | 5 | 244 | 435 | 33 | 240 | 5.57e-25 | 103 |
| MsG0780037094.01.T01 | MTR_3g450710 | 25.455 | 385 | 240 | 12 | 45 | 394 | 41 | 413 | 6.38e-25 | 107 |
| MsG0780037094.01.T01 | MTR_7g114420 | 30.638 | 235 | 125 | 7 | 169 | 397 | 1 | 203 | 7.88e-25 | 103 |
| MsG0780037094.01.T01 | MTR_4g022720 | 25.788 | 349 | 229 | 11 | 63 | 392 | 50 | 387 | 1.41e-24 | 105 |
| MsG0780037094.01.T01 | MTR_4g094835 | 25.823 | 395 | 249 | 16 | 61 | 429 | 57 | 433 | 1.57e-24 | 105 |
| MsG0780037094.01.T01 | MTR_4g022800 | 25.897 | 390 | 256 | 14 | 63 | 429 | 50 | 429 | 1.72e-24 | 105 |
| MsG0780037094.01.T01 | MTR_4g022670 | 26.873 | 387 | 245 | 13 | 68 | 429 | 55 | 428 | 2.33e-24 | 105 |
| MsG0780037094.01.T01 | MTR_3g450690 | 25.130 | 386 | 244 | 12 | 45 | 394 | 41 | 417 | 4.26e-24 | 104 |
| MsG0780037094.01.T01 | MTR_4g094838 | 25.562 | 356 | 211 | 11 | 61 | 392 | 57 | 382 | 1.66e-23 | 102 |
| MsG0780037094.01.T01 | MTR_7g114500 | 35.252 | 139 | 87 | 2 | 20 | 155 | 14 | 152 | 2.74e-23 | 95.9 |
| MsG0780037094.01.T01 | MTR_0042s0230 | 40.441 | 136 | 78 | 2 | 19 | 151 | 12 | 147 | 3.16e-23 | 95.9 |
| MsG0780037094.01.T01 | MTR_8g079710 | 26.551 | 403 | 246 | 19 | 58 | 429 | 49 | 432 | 8.47e-23 | 100 |
| MsG0780037094.01.T01 | MTR_4g022290 | 25.628 | 398 | 255 | 14 | 58 | 429 | 50 | 432 | 1.05e-22 | 100 |
| MsG0780037094.01.T01 | MTR_5g026320 | 25.313 | 399 | 256 | 15 | 37 | 412 | 41 | 420 | 1.10e-22 | 100 |
| MsG0780037094.01.T01 | MTR_1g094790 | 24.368 | 435 | 277 | 15 | 13 | 413 | 1 | 417 | 1.63e-22 | 99.8 |
| MsG0780037094.01.T01 | MTR_8g041770 | 26.393 | 341 | 232 | 10 | 63 | 392 | 59 | 391 | 1.85e-22 | 99.8 |
| MsG0780037094.01.T01 | MTR_3g051790 | 37.705 | 122 | 73 | 1 | 20 | 138 | 17 | 138 | 5.29e-22 | 93.2 |
| MsG0780037094.01.T01 | MTR_7g114960 | 25.549 | 364 | 242 | 11 | 12 | 362 | 5 | 352 | 8.64e-22 | 97.8 |
| MsG0780037094.01.T01 | MTR_4g094832 | 26.934 | 349 | 222 | 14 | 98 | 429 | 85 | 417 | 1.14e-21 | 97.1 |
| MsG0780037094.01.T01 | MTR_7g026860 | 24.479 | 384 | 265 | 12 | 63 | 429 | 50 | 425 | 3.45e-21 | 95.9 |
| MsG0780037094.01.T01 | MTR_8g079970 | 25.122 | 410 | 249 | 16 | 13 | 392 | 1 | 382 | 3.92e-21 | 95.5 |
| MsG0780037094.01.T01 | MTR_8g467590 | 23.724 | 392 | 263 | 13 | 20 | 392 | 12 | 386 | 6.07e-21 | 95.1 |
| MsG0780037094.01.T01 | MTR_6g045553 | 26.778 | 478 | 282 | 23 | 13 | 437 | 12 | 474 | 6.32e-21 | 95.1 |
| MsG0780037094.01.T01 | MTR_0042s0190 | 30.303 | 165 | 108 | 4 | 234 | 395 | 1 | 161 | 6.61e-21 | 91.7 |
| MsG0780037094.01.T01 | MTR_4g022760 | 28.205 | 273 | 178 | 9 | 68 | 327 | 55 | 322 | 8.34e-21 | 94.4 |
| MsG0780037094.01.T01 | MTR_5g081960 | 23.316 | 386 | 228 | 11 | 67 | 393 | 60 | 436 | 1.07e-20 | 94.7 |
| MsG0780037094.01.T01 | MTR_3g070170 | 24.251 | 367 | 223 | 11 | 68 | 392 | 66 | 419 | 1.88e-20 | 94.0 |
| MsG0780037094.01.T01 | MTR_4g022825 | 25.707 | 389 | 246 | 16 | 68 | 429 | 55 | 427 | 4.01e-20 | 92.4 |
| MsG0780037094.01.T01 | MTR_8g079950 | 22.667 | 450 | 289 | 16 | 13 | 432 | 1 | 421 | 5.67e-20 | 92.4 |
| MsG0780037094.01.T01 | MTR_5g084870 | 21.995 | 441 | 297 | 14 | 13 | 432 | 1 | 415 | 2.39e-19 | 90.1 |
| MsG0780037094.01.T01 | MTR_8g467580 | 25.313 | 399 | 262 | 15 | 15 | 392 | 3 | 386 | 2.57e-19 | 90.1 |
| MsG0780037094.01.T01 | MTR_7g014330 | 24.432 | 352 | 234 | 10 | 68 | 391 | 62 | 409 | 7.29e-19 | 89.0 |
| MsG0780037094.01.T01 | MTR_3g102010 | 24.812 | 399 | 248 | 16 | 25 | 390 | 19 | 398 | 1.47e-18 | 88.2 |
| MsG0780037094.01.T01 | MTR_7g014200 | 23.833 | 407 | 260 | 14 | 68 | 435 | 69 | 464 | 5.53e-18 | 86.3 |
| MsG0780037094.01.T01 | MTR_7g014160 | 23.913 | 414 | 258 | 16 | 67 | 435 | 68 | 469 | 1.24e-17 | 85.5 |
| MsG0780037094.01.T01 | MTR_2g089735 | 23.056 | 360 | 237 | 11 | 68 | 392 | 62 | 416 | 1.35e-17 | 85.1 |
| MsG0780037094.01.T01 | MTR_7g014230 | 25.000 | 352 | 232 | 10 | 68 | 391 | 64 | 411 | 3.05e-17 | 84.0 |
| MsG0780037094.01.T01 | MTR_5g084900 | 23.421 | 380 | 226 | 13 | 68 | 432 | 9 | 338 | 5.87e-17 | 82.4 |
| MsG0780037094.01.T01 | MTR_2g089650 | 24.650 | 357 | 234 | 9 | 68 | 392 | 65 | 418 | 6.48e-17 | 83.2 |
| MsG0780037094.01.T01 | MTR_7g014250 | 24.011 | 354 | 233 | 11 | 68 | 391 | 62 | 409 | 8.80e-17 | 82.8 |
| MsG0780037094.01.T01 | MTR_4g007460 | 31.159 | 138 | 82 | 3 | 82 | 217 | 1 | 127 | 2.47e-16 | 76.3 |
| MsG0780037094.01.T01 | MTR_3g035000 | 25.758 | 198 | 116 | 6 | 202 | 397 | 43 | 211 | 3.24e-16 | 79.3 |
| MsG0780037094.01.T01 | MTR_7g014610 | 22.837 | 416 | 263 | 15 | 67 | 435 | 67 | 471 | 1.22e-14 | 76.3 |
| MsG0780037094.01.T01 | MTR_2g089765 | 23.797 | 374 | 239 | 13 | 67 | 399 | 74 | 442 | 1.51e-14 | 75.9 |
| MsG0780037094.01.T01 | MTR_6g015815 | 24.286 | 350 | 232 | 12 | 68 | 391 | 70 | 412 | 2.25e-14 | 75.1 |
| MsG0780037094.01.T01 | MTR_8g039950 | 34.906 | 106 | 66 | 2 | 21 | 123 | 14 | 119 | 3.65e-13 | 66.6 |
| MsG0780037094.01.T01 | MTR_6g015320 | 23.134 | 268 | 172 | 8 | 150 | 391 | 147 | 406 | 4.09e-13 | 71.2 |
| MsG0780037094.01.T01 | MTR_2g089670 | 21.849 | 357 | 239 | 11 | 67 | 391 | 81 | 429 | 8.84e-13 | 70.5 |
| MsG0780037094.01.T01 | MTR_1g011660 | 22.189 | 338 | 212 | 12 | 48 | 359 | 39 | 351 | 2.97e-12 | 68.6 |
| MsG0780037094.01.T01 | MTR_6g016815 | 25.941 | 239 | 150 | 9 | 63 | 290 | 64 | 286 | 3.37e-12 | 68.2 |
| MsG0780037094.01.T01 | MTR_7g085960 | 27.451 | 153 | 77 | 3 | 261 | 396 | 11 | 146 | 3.63e-12 | 65.5 |
| MsG0780037094.01.T01 | MTR_8g012750 | 22.520 | 373 | 242 | 11 | 67 | 397 | 61 | 428 | 5.64e-12 | 67.8 |
| MsG0780037094.01.T01 | MTR_2g045550 | 28.947 | 152 | 97 | 5 | 15 | 165 | 4 | 145 | 7.02e-12 | 63.5 |
| MsG0780037094.01.T01 | MTR_3g100150 | 23.629 | 237 | 160 | 7 | 48 | 275 | 46 | 270 | 1.46e-11 | 66.6 |
| MsG0780037094.01.T01 | MTR_7g013850 | 21.163 | 430 | 270 | 16 | 62 | 436 | 62 | 477 | 2.75e-11 | 65.9 |
| MsG0780037094.01.T01 | MTR_3g049080 | 36.986 | 73 | 44 | 1 | 24 | 94 | 10 | 82 | 3.72e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037094.01.T01 | AT5G41040 | 72.979 | 433 | 111 | 4 | 11 | 437 | 25 | 457 | 0.0 | 669 |
| MsG0780037094.01.T01 | AT5G41040 | 72.979 | 433 | 111 | 4 | 11 | 437 | 9 | 441 | 0.0 | 668 |
| MsG0780037094.01.T01 | AT5G63560 | 61.520 | 421 | 152 | 4 | 20 | 437 | 13 | 426 | 0.0 | 528 |
| MsG0780037094.01.T01 | AT3G48720 | 55.609 | 419 | 182 | 3 | 21 | 437 | 14 | 430 | 4.76e-177 | 502 |
| MsG0780037094.01.T01 | AT5G48930 | 34.174 | 436 | 268 | 7 | 12 | 435 | 2 | 430 | 4.55e-82 | 259 |
| MsG0780037094.01.T01 | AT1G03390 | 35.747 | 442 | 264 | 14 | 13 | 437 | 19 | 457 | 3.66e-77 | 248 |
| MsG0780037094.01.T01 | AT1G65450 | 36.028 | 433 | 253 | 12 | 20 | 436 | 22 | 446 | 4.45e-77 | 247 |
| MsG0780037094.01.T01 | AT1G27620 | 33.724 | 427 | 260 | 9 | 19 | 435 | 12 | 425 | 9.78e-74 | 238 |
| MsG0780037094.01.T01 | AT5G17540 | 32.637 | 383 | 247 | 7 | 20 | 395 | 13 | 391 | 2.35e-64 | 214 |
| MsG0780037094.01.T01 | AT3G03480 | 33.255 | 424 | 260 | 11 | 23 | 431 | 26 | 441 | 3.13e-63 | 211 |
| MsG0780037094.01.T01 | AT1G28680 | 31.797 | 434 | 272 | 11 | 20 | 435 | 13 | 440 | 2.85e-57 | 195 |
| MsG0780037094.01.T01 | AT2G19070 | 32.000 | 400 | 238 | 11 | 26 | 396 | 14 | 408 | 3.55e-57 | 195 |
| MsG0780037094.01.T01 | AT5G57840 | 32.570 | 393 | 234 | 8 | 20 | 390 | 7 | 390 | 5.33e-57 | 194 |
| MsG0780037094.01.T01 | AT2G40230 | 31.019 | 432 | 270 | 11 | 20 | 435 | 9 | 428 | 1.10e-54 | 188 |
| MsG0780037094.01.T01 | AT1G28680 | 32.565 | 347 | 222 | 8 | 20 | 360 | 13 | 353 | 2.14e-50 | 176 |
| MsG0780037094.01.T01 | AT4G31910 | 30.189 | 424 | 259 | 13 | 31 | 423 | 26 | 443 | 1.17e-47 | 170 |
| MsG0780037094.01.T01 | AT5G07080 | 30.455 | 440 | 268 | 17 | 19 | 433 | 17 | 443 | 1.21e-45 | 164 |
| MsG0780037094.01.T01 | AT1G65450 | 32.639 | 288 | 176 | 7 | 161 | 436 | 1 | 282 | 8.20e-45 | 157 |
| MsG0780037094.01.T01 | AT3G47170 | 29.241 | 448 | 282 | 13 | 19 | 433 | 15 | 460 | 6.25e-42 | 154 |
| MsG0780037094.01.T01 | AT2G25150 | 30.995 | 442 | 264 | 14 | 23 | 435 | 20 | 449 | 1.02e-41 | 154 |
| MsG0780037094.01.T01 | AT3G62160 | 29.668 | 391 | 237 | 12 | 22 | 397 | 11 | 378 | 2.91e-41 | 152 |
| MsG0780037094.01.T01 | AT2G23510 | 29.120 | 443 | 271 | 16 | 23 | 436 | 20 | 448 | 1.45e-38 | 145 |
| MsG0780037094.01.T01 | AT1G78990 | 27.295 | 403 | 244 | 14 | 48 | 414 | 46 | 435 | 1.94e-34 | 134 |
| MsG0780037094.01.T01 | AT1G24430 | 28.058 | 417 | 253 | 17 | 35 | 432 | 27 | 415 | 2.45e-31 | 125 |
| MsG0780037094.01.T01 | AT1G31490 | 27.877 | 391 | 248 | 15 | 37 | 410 | 29 | 402 | 7.67e-30 | 120 |
| MsG0780037094.01.T01 | AT1G32910 | 25.068 | 367 | 246 | 11 | 46 | 393 | 44 | 400 | 1.21e-29 | 120 |
| MsG0780037094.01.T01 | AT5G16410 | 26.823 | 384 | 243 | 14 | 37 | 400 | 61 | 426 | 1.22e-27 | 115 |
| MsG0780037094.01.T01 | AT5G07870 | 28.754 | 313 | 196 | 9 | 62 | 356 | 66 | 369 | 1.22e-26 | 112 |
| MsG0780037094.01.T01 | AT5G42830 | 29.014 | 355 | 221 | 12 | 20 | 356 | 16 | 357 | 1.75e-26 | 111 |
| MsG0780037094.01.T01 | AT2G39980 | 26.190 | 378 | 216 | 11 | 68 | 392 | 62 | 429 | 1.38e-25 | 109 |
| MsG0780037094.01.T01 | AT3G29670 | 24.112 | 394 | 271 | 12 | 48 | 419 | 42 | 429 | 9.93e-24 | 103 |
| MsG0780037094.01.T01 | AT5G23940 | 27.451 | 408 | 256 | 14 | 51 | 429 | 43 | 439 | 1.08e-23 | 103 |
| MsG0780037094.01.T01 | AT5G07860 | 27.508 | 309 | 195 | 8 | 62 | 356 | 66 | 359 | 1.29e-23 | 103 |
| MsG0780037094.01.T01 | AT3G50270 | 26.463 | 393 | 250 | 17 | 68 | 434 | 62 | 441 | 2.16e-23 | 102 |
| MsG0780037094.01.T01 | AT5G61160 | 25.352 | 355 | 234 | 12 | 68 | 399 | 64 | 410 | 5.72e-23 | 101 |
| MsG0780037094.01.T01 | AT3G29635 | 24.289 | 387 | 267 | 11 | 71 | 436 | 70 | 451 | 7.91e-23 | 100 |
| MsG0780037094.01.T01 | AT4G15390 | 23.853 | 436 | 285 | 16 | 23 | 432 | 15 | 429 | 1.19e-22 | 100 |
| MsG0780037094.01.T01 | AT4G15390 | 23.853 | 436 | 285 | 16 | 23 | 432 | 15 | 429 | 1.19e-22 | 100 |
| MsG0780037094.01.T01 | AT1G24420 | 24.110 | 365 | 245 | 10 | 79 | 432 | 76 | 419 | 3.41e-22 | 98.6 |
| MsG0780037094.01.T01 | AT1G24420 | 24.110 | 365 | 245 | 10 | 79 | 432 | 76 | 419 | 3.41e-22 | 98.6 |
| MsG0780037094.01.T01 | AT3G30280 | 25.455 | 385 | 243 | 18 | 62 | 424 | 56 | 418 | 6.31e-20 | 92.0 |
| MsG0780037094.01.T01 | AT5G47950 | 24.439 | 401 | 254 | 17 | 48 | 432 | 42 | 409 | 1.51e-19 | 90.9 |
| MsG0780037094.01.T01 | AT3G50280 | 22.680 | 388 | 269 | 14 | 68 | 434 | 59 | 436 | 1.96e-19 | 90.5 |
| MsG0780037094.01.T01 | AT5G38130 | 24.251 | 367 | 250 | 12 | 71 | 419 | 82 | 438 | 1.50e-18 | 88.2 |
| MsG0780037094.01.T01 | AT5G23970 | 23.472 | 409 | 259 | 12 | 37 | 421 | 24 | 402 | 1.64e-18 | 87.8 |
| MsG0780037094.01.T01 | AT3G29590 | 24.093 | 386 | 261 | 13 | 76 | 437 | 69 | 446 | 4.05e-18 | 86.7 |
| MsG0780037094.01.T01 | AT1G65450 | 45.455 | 110 | 55 | 4 | 20 | 125 | 22 | 130 | 1.03e-17 | 80.9 |
| MsG0780037094.01.T01 | AT4G15400 | 24.356 | 427 | 288 | 17 | 23 | 433 | 12 | 419 | 1.25e-17 | 85.1 |
| MsG0780037094.01.T01 | AT5G07850 | 25.364 | 343 | 216 | 14 | 20 | 343 | 27 | 348 | 1.11e-16 | 82.4 |
| MsG0780037094.01.T01 | AT5G67150 | 22.973 | 370 | 238 | 13 | 68 | 407 | 61 | 413 | 1.37e-16 | 82.0 |
| MsG0780037094.01.T01 | AT3G29680 | 22.481 | 387 | 276 | 8 | 68 | 435 | 62 | 443 | 2.81e-16 | 81.3 |
| MsG0780037094.01.T01 | AT3G50300 | 24.064 | 374 | 250 | 13 | 68 | 419 | 59 | 420 | 5.37e-16 | 80.1 |
| MsG0780037094.01.T01 | AT5G39090 | 23.016 | 378 | 264 | 11 | 78 | 436 | 75 | 444 | 2.22e-14 | 75.1 |
| MsG0780037094.01.T01 | AT4G29250 | 23.077 | 429 | 282 | 17 | 34 | 433 | 33 | 442 | 6.96e-14 | 73.9 |
| MsG0780037094.01.T01 | AT1G03495 | 27.778 | 288 | 168 | 15 | 68 | 322 | 66 | 346 | 1.26e-13 | 72.4 |
| MsG0780037094.01.T01 | AT3G50280 | 22.295 | 305 | 217 | 10 | 142 | 434 | 10 | 306 | 3.30e-13 | 70.5 |
| MsG0780037094.01.T01 | AT1G03940 | 24.510 | 408 | 257 | 17 | 68 | 436 | 66 | 461 | 4.44e-12 | 68.2 |
| MsG0780037094.01.T01 | AT3G50290 | 24.906 | 265 | 183 | 7 | 137 | 389 | 9 | 269 | 1.66e-11 | 65.1 |
| MsG0780037094.01.T01 | AT5G39050 | 21.725 | 313 | 219 | 6 | 150 | 436 | 152 | 464 | 4.59e-11 | 65.1 |
Find 100 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTCCAAAAGGGTATTT+TGG | 0.109330 | 7:-19424239 | MsG0780037094.01.T01:CDS |
| GTTGATGAAATTAGTTTATA+TGG | 0.203979 | 7:-19423698 | MsG0780037094.01.T01:three_prime_UTR |
| AGAAGCTTTGTTTCTTGTTC+TGG | 0.223449 | 7:+19424296 | None:intergenic |
| GTCTGGACCGGTTTCCTTGC+CGG | 0.230469 | 7:-19423973 | MsG0780037094.01.T01:CDS |
| CTTCAATGTCAGCAAATTCT+TGG | 0.238280 | 7:+19424510 | None:intergenic |
| GAAAATTCTAATTATCAAAA+TGG | 0.257291 | 7:-19426125 | MsG0780037094.01.T01:CDS |
| CACCATTTCATCTTCATATA+AGG | 0.260329 | 7:+19424469 | None:intergenic |
| TTGTTATATATTGTATGATA+TGG | 0.268077 | 7:+19426367 | None:intergenic |
| TGCTTCACACAAATATGATA+TGG | 0.268225 | 7:+19426315 | None:intergenic |
| CCAAGATTTAATGCAGATAT+AGG | 0.271308 | 7:-19423859 | MsG0780037094.01.T01:exon |
| GTTCATTACTACCCTCTTGC+TGG | 0.277776 | 7:-19425900 | MsG0780037094.01.T01:CDS |
| CACTGTATGTTTGATGGAAT+TGG | 0.294988 | 7:-19424653 | MsG0780037094.01.T01:CDS |
| CCGTTTCATACCACCGATTT+CGG | 0.298332 | 7:-19424014 | MsG0780037094.01.T01:CDS |
| AATTGTTCAATGGAAGAAAT+TGG | 0.299341 | 7:-19425798 | MsG0780037094.01.T01:CDS |
| CCTTTCTTTGTTTCTTCAGA+TGG | 0.304433 | 7:+19426053 | None:intergenic |
| ATATGGAATGGTACTATCTT+AGG | 0.310261 | 7:+19426384 | None:intergenic |
| ACAAGCATTAATGTGCTTCT+TGG | 0.310927 | 7:-19423909 | MsG0780037094.01.T01:CDS |
| AACAAGAGCTAGGCCATCTT+TGG | 0.319090 | 7:-19424072 | MsG0780037094.01.T01:CDS |
| CAAGTGTTGGTTCACTTGTT+AGG | 0.323483 | 7:+19426081 | None:intergenic |
| TGGTGCAAATGCTCTATCTT+CGG | 0.344041 | 7:+19424530 | None:intergenic |
| CCATTCCCAAAATACCCTTT+TGG | 0.354945 | 7:+19424233 | None:intergenic |
| CCTATATCTGCATTAAATCT+TGG | 0.369316 | 7:+19423859 | None:intergenic |
| ATATTTGTGTGAAGCAATTC+AGG | 0.371213 | 7:-19426308 | MsG0780037094.01.T01:intron |
| GGTGCAAATGCTCTATCTTC+GGG | 0.375653 | 7:+19424531 | None:intergenic |
| CGATTTCGGTTGGGGAGAAC+CGG | 0.379270 | 7:-19424000 | MsG0780037094.01.T01:CDS |
| TATTCTTCAGATGCCTCCTT+TGG | 0.394177 | 7:-19425709 | MsG0780037094.01.T01:CDS |
| AAGTGCTTTCAGCATTTGTT+TGG | 0.399533 | 7:-19424349 | MsG0780037094.01.T01:CDS |
| TCCTTCTCCGGCAAGGAAAC+CGG | 0.400213 | 7:+19423966 | None:intergenic |
| GATGCCTCCTTTGGTTGCTC+AGG | 0.401248 | 7:-19425700 | MsG0780037094.01.T01:intron |
| TCATACCACCGATTTCGGTT+GGG | 0.412037 | 7:-19424009 | MsG0780037094.01.T01:CDS |
| CGGTTCTCCCCAACCGAAAT+CGG | 0.413358 | 7:+19424001 | None:intergenic |
| TGGGGAGAACCGGTTCTGTC+TGG | 0.419323 | 7:-19423990 | MsG0780037094.01.T01:CDS |
| TTCATATAAGGTACTAGTGT+TGG | 0.419653 | 7:+19424481 | None:intergenic |
| TACCTTATATGAAGATGAAA+TGG | 0.425519 | 7:-19424471 | MsG0780037094.01.T01:CDS |
| AACAAAATCACTTCCTTCTC+CGG | 0.435908 | 7:+19423954 | None:intergenic |
| CATACCACCGATTTCGGTTG+GGG | 0.437822 | 7:-19424008 | MsG0780037094.01.T01:CDS |
| TCCAAGGACTCTTGGTATGT+TGG | 0.438373 | 7:-19425757 | MsG0780037094.01.T01:CDS |
| TTCATACCACCGATTTCGGT+TGG | 0.441418 | 7:-19424010 | MsG0780037094.01.T01:CDS |
| TTTGAACCAAAACTTCCAAA+AGG | 0.445633 | 7:-19424248 | MsG0780037094.01.T01:CDS |
| TTCTTTGTTTCTTCAGATGG+TGG | 0.446811 | 7:+19426056 | None:intergenic |
| AACCTTCACCGTATACGAAA+AGG | 0.447710 | 7:+19424160 | None:intergenic |
| ACCAATGCTGTTTGTAAAGC+AGG | 0.450940 | 7:-19424200 | MsG0780037094.01.T01:CDS |
| AGTATGCTTCGATCGAGAAC+AGG | 0.458088 | 7:+19424569 | None:intergenic |
| GCTTCACACAAATATGATAT+GGG | 0.459751 | 7:+19426316 | None:intergenic |
| TTCTATTATTATGTTTCATA+CGG | 0.460034 | 7:-19423835 | MsG0780037094.01.T01:three_prime_UTR |
| TGAAGAATATGTTTAGCATC+AGG | 0.461984 | 7:+19425723 | None:intergenic |
| AGTGATGTTTATGAATCTAT+TGG | 0.464259 | 7:-19423760 | MsG0780037094.01.T01:three_prime_UTR |
| AAACCTGATCCAAGGACTCT+TGG | 0.464374 | 7:-19425765 | MsG0780037094.01.T01:CDS |
| ATGAATCACTGTATGTTTGA+TGG | 0.464465 | 7:-19424659 | MsG0780037094.01.T01:CDS |
| TTCATTACTACCCTCTTGCT+GGG | 0.465589 | 7:-19425899 | MsG0780037094.01.T01:CDS |
| AGCTGAAGCTAATTGTTCAA+TGG | 0.473226 | 7:-19425808 | MsG0780037094.01.T01:CDS |
| ATACCAAGAGTCCTTGGATC+AGG | 0.478213 | 7:+19425762 | None:intergenic |
| ACCAACATACCAAGAGTCCT+TGG | 0.479611 | 7:+19425756 | None:intergenic |
| CTATGGAGTTTGTGAACTCA+TGG | 0.489466 | 7:-19424628 | MsG0780037094.01.T01:CDS |
| TCAGATGGTGGAACAAGTGT+TGG | 0.489688 | 7:+19426068 | None:intergenic |
| ACCGGTTTCCTTGCCGGAGA+AGG | 0.494266 | 7:-19423967 | MsG0780037094.01.T01:CDS |
| ACCTGCTTTACAAACAGCAT+TGG | 0.499694 | 7:+19424199 | None:intergenic |
| AAAACCTCCACATTTGAACT+TGG | 0.504811 | 7:+19424697 | None:intergenic |
| CTCAGAGGGTAAACTGATTG+TGG | 0.510531 | 7:-19425862 | MsG0780037094.01.T01:CDS |
| AAAATCTTCATGACAGGAGC+AGG | 0.511375 | 7:+19423882 | None:intergenic |
| ACCTTCACCGTATACGAAAA+GGG | 0.526148 | 7:+19424161 | None:intergenic |
| AGAACAGGAGGCACGGAAAG+TGG | 0.526515 | 7:+19424584 | None:intergenic |
| TTGAACCAAAACTTCCAAAA+GGG | 0.529877 | 7:-19424247 | MsG0780037094.01.T01:CDS |
| TCCTCTCTTGACCATGTGAA+AGG | 0.539507 | 7:+19423931 | None:intergenic |
| TCTTGGAAAATCTTCATGAC+AGG | 0.540623 | 7:+19423876 | None:intergenic |
| GTTTGATGGAATTGGAGCTA+TGG | 0.548532 | 7:-19424645 | MsG0780037094.01.T01:CDS |
| TAATCAAGAAGTGTTTGAGA+TGG | 0.549573 | 7:-19426147 | MsG0780037094.01.T01:exon |
| TTGGTAGTAAGCAATAACTA+AGG | 0.550936 | 7:-19423741 | MsG0780037094.01.T01:three_prime_UTR |
| GAAACCGGTCCAGACAGAAC+CGG | 0.551440 | 7:+19423981 | None:intergenic |
| CCGAAATCGGTGGTATGAAA+CGG | 0.552192 | 7:+19424014 | None:intergenic |
| AAAAGTGTACAAGCCAAAGA+TGG | 0.555885 | 7:+19424059 | None:intergenic |
| AGAACCGGTTCTGTCTGGAC+CGG | 0.557075 | 7:-19423985 | MsG0780037094.01.T01:CDS |
| TATTCAAGATGCAATCAAGA+TGG | 0.561804 | 7:-19424138 | MsG0780037094.01.T01:CDS |
| CCATCTGAAGAAACAAAGAA+AGG | 0.565357 | 7:-19426053 | MsG0780037094.01.T01:CDS |
| AAACTGATTGTGGATTGTAC+TGG | 0.568236 | 7:-19425852 | MsG0780037094.01.T01:CDS |
| TATGGAGTTTGTGAACTCAT+GGG | 0.568942 | 7:-19424627 | MsG0780037094.01.T01:CDS |
| GAATGCTTGTGAAGTGATCA+AGG | 0.580536 | 7:-19425943 | MsG0780037094.01.T01:CDS |
| TCCTTTCACATGGTCAAGAG+AGG | 0.582730 | 7:-19423932 | MsG0780037094.01.T01:CDS |
| AGATTAAGTATAAGCTCAGA+GGG | 0.587672 | 7:-19425876 | MsG0780037094.01.T01:CDS |
| CAGCTGACCAAGTTCAAATG+TGG | 0.590914 | 7:-19424704 | MsG0780037094.01.T01:CDS |
| TCTCGATCGAAGCATACTAA+AGG | 0.593265 | 7:-19424564 | MsG0780037094.01.T01:CDS |
| GTGCAAATGCTCTATCTTCG+GGG | 0.597277 | 7:+19424532 | None:intergenic |
| AATCACTTCCTTCTCCGGCA+AGG | 0.599797 | 7:+19423959 | None:intergenic |
| CTGACCAAGTTCAAATGTGG+AGG | 0.605830 | 7:-19424701 | MsG0780037094.01.T01:CDS |
| ATGGAGTTTGTGAACTCATG+GGG | 0.608694 | 7:-19424626 | MsG0780037094.01.T01:CDS |
| ATACTTAATCTCCCAGCAAG+AGG | 0.610225 | 7:+19425888 | None:intergenic |
| TGCAAATGCTCTATCTTCGG+GGG | 0.613923 | 7:+19424533 | None:intergenic |
| ATATTACAAAACCTGATCCA+AGG | 0.621561 | 7:-19425773 | MsG0780037094.01.T01:CDS |
| CATACCTGAGCAACCAAAGG+AGG | 0.626730 | 7:+19425696 | None:intergenic |
| TACTTAATCTCCCAGCAAGA+GGG | 0.629161 | 7:+19425889 | None:intergenic |
| TCGATCGAGAACAGGAGGCA+CGG | 0.641248 | 7:+19424577 | None:intergenic |
| AAACATACCTGAGCAACCAA+AGG | 0.647608 | 7:+19425693 | None:intergenic |
| GAGATTAAGTATAAGCTCAG+AGG | 0.659227 | 7:-19425877 | MsG0780037094.01.T01:CDS |
| ATGCTTCGATCGAGAACAGG+AGG | 0.660881 | 7:+19424572 | None:intergenic |
| AAAGCTTTAGAAGATGAAGG+TGG | 0.665451 | 7:-19424398 | MsG0780037094.01.T01:CDS |
| ATATATTGTATGATATGGAA+TGG | 0.669189 | 7:+19426372 | None:intergenic |
| TTCTCCCCAACCGAAATCGG+TGG | 0.671335 | 7:+19424004 | None:intergenic |
| ATTGTGGATTGTACTGGAGA+AGG | 0.681300 | 7:-19425846 | MsG0780037094.01.T01:CDS |
| TGGAGTTTGTGAACTCATGG+GGG | 0.682291 | 7:-19424625 | MsG0780037094.01.T01:CDS |
| GGAGTTTGTGAACTCATGGG+GGG | 0.709273 | 7:-19424624 | MsG0780037094.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTAAAAAATTTTAGTTAA+GGG | - | Chr7:19424759-19424778 | MsG0780037094.01.T01:intron | 10.0% |
| !!! | TGATTAAAAAATTTTAGTTA+AGG | - | Chr7:19424758-19424777 | MsG0780037094.01.T01:intron | 10.0% |
| !!! | TTGTGTTATTTTTTATTATA+TGG | - | Chr7:19426270-19426289 | MsG0780037094.01.T01:intron | 10.0% |
| !! | ACTTCTAAATCATTTATAAT+TGG | + | Chr7:19424729-19424748 | None:intergenic | 15.0% |
| !! | ATTTATGTAATGTAAACATA+TGG | - | Chr7:19425130-19425149 | MsG0780037094.01.T01:intron | 15.0% |
| !! | CTTCTAAATCATTTATAATT+GGG | + | Chr7:19424728-19424747 | None:intergenic | 15.0% |
| !! | GAAAATTCTAATTATCAAAA+TGG | - | Chr7:19423957-19423976 | MsG0780037094.01.T01:CDS | 15.0% |
| !! | TTCTATTATTATGTTTCATA+CGG | - | Chr7:19426247-19426266 | MsG0780037094.01.T01:intron | 15.0% |
| !! | TTGTTATATATTGTATGATA+TGG | + | Chr7:19423718-19423737 | None:intergenic | 15.0% |
| !!! | AGTTTTTGTCAAAATTATAA+TGG | - | Chr7:19424842-19424861 | MsG0780037094.01.T01:intron | 15.0% |
| !!! | CTATTTGAGAAATTTTAAAT+AGG | + | Chr7:19424966-19424985 | None:intergenic | 15.0% |
| !!! | CTCTAAACTTTTAAATAATT+TGG | - | Chr7:19424645-19424664 | MsG0780037094.01.T01:CDS | 15.0% |
| !!! | CTTTTAAATAATTTGGAATT+TGG | - | Chr7:19424652-19424671 | MsG0780037094.01.T01:CDS | 15.0% |
| !! | AATGTTATGTTTGAAGATTA+AGG | + | Chr7:19423871-19423890 | None:intergenic | 20.0% |
| !! | ATATATTGTATGATATGGAA+TGG | + | Chr7:19423713-19423732 | None:intergenic | 20.0% |
| !! | ATATGATTCAGTGTATTTAT+AGG | - | Chr7:19424536-19424555 | MsG0780037094.01.T01:CDS | 20.0% |
| !! | ATTACATAAATTCCTATGAA+TGG | + | Chr7:19425121-19425140 | None:intergenic | 20.0% |
| !! | TTTGATTATTGACATAGAAA+CGG | + | Chr7:19425230-19425249 | None:intergenic | 20.0% |
| !!! | GTTGATGAAATTAGTTTATA+TGG | - | Chr7:19426384-19426403 | MsG0780037094.01.T01:five_prime_UTR | 20.0% |
| !!! | TTTTTGTTTGTTTGTAAAAC+AGG | - | Chr7:19423907-19423926 | MsG0780037094.01.T01:CDS | 20.0% |
| ! | AAAAATATTTCGCACATGTT+TGG | + | Chr7:19424900-19424919 | None:intergenic | 25.0% |
| ! | AATTGTTCAATGGAAGAAAT+TGG | - | Chr7:19424284-19424303 | MsG0780037094.01.T01:CDS | 25.0% |
| ! | AGTGATGTTTATGAATCTAT+TGG | - | Chr7:19426322-19426341 | MsG0780037094.01.T01:five_prime_UTR | 25.0% |
| ! | CAGTGACAAAAAATAAATGA+AGG | + | Chr7:19425011-19425030 | None:intergenic | 25.0% |
| ! | TACCTTATATGAAGATGAAA+TGG | - | Chr7:19425611-19425630 | MsG0780037094.01.T01:intron | 25.0% |
| ! | TGTTTCAAAAATCAAGAGAA+GGG | - | Chr7:19424110-19424129 | MsG0780037094.01.T01:CDS | 25.0% |
| ! | TTGTTTCAAAAATCAAGAGA+AGG | - | Chr7:19424109-19424128 | MsG0780037094.01.T01:CDS | 25.0% |
| !!! | AAAAAAGCTTTAGAAGATGA+AGG | - | Chr7:19425681-19425700 | MsG0780037094.01.T01:intron | 25.0% |
| !!! | ATCAGCTATTGATTATTTTG+AGG | - | Chr7:19425986-19426005 | MsG0780037094.01.T01:CDS | 25.0% |
| !!! | CTTCAATTCTTTTAGTTTCT+CGG | + | Chr7:19425661-19425680 | None:intergenic | 25.0% |
| !!! | TTCAATTCTTTTAGTTTCTC+GGG | + | Chr7:19425660-19425679 | None:intergenic | 25.0% |
| !!! | TTTTTGAAATATAGTTGACG+TGG | - | Chr7:19425310-19425329 | MsG0780037094.01.T01:intron | 25.0% |
| !!! | TTTTTTTGTAGTTGGATTTC+TGG | - | Chr7:19424423-19424442 | MsG0780037094.01.T01:CDS | 25.0% |
| AGATTAAGTATAAGCTCAGA+GGG | - | Chr7:19424206-19424225 | MsG0780037094.01.T01:CDS | 30.0% | |
| ATATGGAATGGTACTATCTT+AGG | + | Chr7:19423701-19423720 | None:intergenic | 30.0% | |
| ATATTACAAAACCTGATCCA+AGG | - | Chr7:19424309-19424328 | MsG0780037094.01.T01:CDS | 30.0% | |
| ATATTTGTGTGAAGCAATTC+AGG | - | Chr7:19423774-19423793 | MsG0780037094.01.T01:three_prime_UTR | 30.0% | |
| ATGAATCACTGTATGTTTGA+TGG | - | Chr7:19425423-19425442 | MsG0780037094.01.T01:intron | 30.0% | |
| CACCATTTCATCTTCATATA+AGG | + | Chr7:19425616-19425635 | None:intergenic | 30.0% | |
| CCAAGATTTAATGCAGATAT+AGG | - | Chr7:19426223-19426242 | MsG0780037094.01.T01:intron | 30.0% | |
| CCTATATCTGCATTAAATCT+TGG | + | Chr7:19426226-19426245 | None:intergenic | 30.0% | |
| GCTTCACACAAATATGATAT+GGG | + | Chr7:19423769-19423788 | None:intergenic | 30.0% | |
| TATTCAAGATGCAATCAAGA+TGG | - | Chr7:19425944-19425963 | MsG0780037094.01.T01:CDS | 30.0% | |
| TCTCAAATTATTATCCGAGT+CGG | + | Chr7:19424511-19424530 | None:intergenic | 30.0% | |
| TGAAGAATATGTTTAGCATC+AGG | + | Chr7:19424362-19424381 | None:intergenic | 30.0% | |
| TGCTTCACACAAATATGATA+TGG | + | Chr7:19423770-19423789 | None:intergenic | 30.0% | |
| TTGAACCAAAACTTCCAAAA+GGG | - | Chr7:19425835-19425854 | MsG0780037094.01.T01:CDS | 30.0% | |
| TTTGAACCAAAACTTCCAAA+AGG | - | Chr7:19425834-19425853 | MsG0780037094.01.T01:CDS | 30.0% | |
| ! | TTCATATAAGGTACTAGTGT+TGG | + | Chr7:19425604-19425623 | None:intergenic | 30.0% |
| ! | TTGGTAGTAAGCAATAACTA+AGG | - | Chr7:19426341-19426360 | MsG0780037094.01.T01:five_prime_UTR | 30.0% |
| !! | AAATACCCTTTTGGAAGTTT+TGG | + | Chr7:19425843-19425862 | None:intergenic | 30.0% |
| !! | TAATCAAGAAGTGTTTGAGA+TGG | - | Chr7:19423935-19423954 | MsG0780037094.01.T01:CDS | 30.0% |
| !! | TAGTTACTTGCTATGAAACA+CGG | - | Chr7:19424452-19424471 | MsG0780037094.01.T01:CDS | 30.0% |
| !! | TTCGTGCTTACTTGTTATTT+GGG | - | Chr7:19424621-19424640 | MsG0780037094.01.T01:CDS | 30.0% |
| !!! | AAACTTCCAAAAGGGTATTT+TGG | - | Chr7:19425843-19425862 | MsG0780037094.01.T01:CDS | 30.0% |
| !!! | AACTTCCAAAAGGGTATTTT+GGG | - | Chr7:19425844-19425863 | MsG0780037094.01.T01:CDS | 30.0% |
| !!! | GACTAGTCTTTTTTTGTAGT+TGG | - | Chr7:19424415-19424434 | MsG0780037094.01.T01:CDS | 30.0% |
| !!! | TGTTTTGATCAAGGTTTGAT+AGG | + | Chr7:19424064-19424083 | None:intergenic | 30.0% |
| !!! | TTACAGCAATGTTTTGATCA+AGG | + | Chr7:19424073-19424092 | None:intergenic | 30.0% |
| AAAACCTCCACATTTGAACT+TGG | + | Chr7:19425388-19425407 | None:intergenic | 35.0% | |
| AACAAAATCACTTCCTTCTC+CGG | + | Chr7:19426131-19426150 | None:intergenic | 35.0% | |
| AAGTGCTTTCAGCATTTGTT+TGG | - | Chr7:19425733-19425752 | MsG0780037094.01.T01:CDS | 35.0% | |
| ACAAGCATTAATGTGCTTCT+TGG | - | Chr7:19426173-19426192 | MsG0780037094.01.T01:intron | 35.0% | |
| AGCTGAAGCTAATTGTTCAA+TGG | - | Chr7:19424274-19424293 | MsG0780037094.01.T01:CDS | 35.0% | |
| CACTGTATGTTTGATGGAAT+TGG | - | Chr7:19425429-19425448 | MsG0780037094.01.T01:intron | 35.0% | |
| CCATCTGAAGAAACAAAGAA+AGG | - | Chr7:19424029-19424048 | MsG0780037094.01.T01:CDS | 35.0% | |
| CTTCAATGTCAGCAAATTCT+TGG | + | Chr7:19425575-19425594 | None:intergenic | 35.0% | |
| GAGATTAAGTATAAGCTCAG+AGG | - | Chr7:19424205-19424224 | MsG0780037094.01.T01:CDS | 35.0% | |
| GCAATGTTGAAAATGTCACA+TGG | + | Chr7:19423831-19423850 | None:intergenic | 35.0% | |
| GCATTTCTCAATCCATTCAT+AGG | - | Chr7:19425106-19425125 | MsG0780037094.01.T01:intron | 35.0% | |
| TATGGAGTTTGTGAACTCAT+GGG | - | Chr7:19425455-19425474 | MsG0780037094.01.T01:intron | 35.0% | |
| TCAAGTGTATCTTTGATGAG+TGG | - | Chr7:19424788-19424807 | MsG0780037094.01.T01:intron | 35.0% | |
| TCATGTTGCAACTGTAATTG+AGG | + | Chr7:19425336-19425355 | None:intergenic | 35.0% | |
| TCTTGGAAAATCTTCATGAC+AGG | + | Chr7:19426209-19426228 | None:intergenic | 35.0% | |
| ! | AAAAGTGTACAAGCCAAAGA+TGG | + | Chr7:19426026-19426045 | None:intergenic | 35.0% |
| ! | AAACTGATTGTGGATTGTAC+TGG | - | Chr7:19424230-19424249 | MsG0780037094.01.T01:CDS | 35.0% |
| ! | AAATGTGGAGGTTTTTCTCT+TGG | - | Chr7:19425393-19425412 | MsG0780037094.01.T01:intron | 35.0% |
| ! | CCTTTCTTTGTTTCTTCAGA+TGG | + | Chr7:19424032-19424051 | None:intergenic | 35.0% |
| ! | CGTCGCAATATTTTATATCG+TGG | - | Chr7:19425282-19425301 | MsG0780037094.01.T01:intron | 35.0% |
| ! | GTACACTTTTGATCACAACT+TGG | - | Chr7:19426036-19426055 | MsG0780037094.01.T01:CDS | 35.0% |
| ! | GTGATTTTGTTCCTTTCACA+TGG | - | Chr7:19426140-19426159 | MsG0780037094.01.T01:exon | 35.0% |
| ! | TTCTTTGTTTCTTCAGATGG+TGG | + | Chr7:19424029-19424048 | None:intergenic | 35.0% |
| ! | TTTTGATCACAACTTGGTCT+AGG | - | Chr7:19426042-19426061 | MsG0780037094.01.T01:CDS | 35.0% |
| !! | AAAGCTTTAGAAGATGAAGG+TGG | - | Chr7:19425684-19425703 | MsG0780037094.01.T01:intron | 35.0% |
| !! | AGAAGCTTTGTTTCTTGTTC+TGG | + | Chr7:19425789-19425808 | None:intergenic | 35.0% |
| !! | GTTCGTGCTTACTTGTTATT+TGG | - | Chr7:19424620-19424639 | MsG0780037094.01.T01:CDS | 35.0% |
| !!! | AAGCTTCTTTTTGCTGTTGA+TGG | - | Chr7:19425801-19425820 | MsG0780037094.01.T01:CDS | 35.0% |
| !!! | ATTTTGAGGTAACAAGAGCT+AGG | - | Chr7:19426000-19426019 | MsG0780037094.01.T01:CDS | 35.0% |
| !!! | TCTTTTTGCTGTTGATGGAA+GGG | - | Chr7:19425806-19425825 | MsG0780037094.01.T01:CDS | 35.0% |
| !!! | TTCTTTTTGCTGTTGATGGA+AGG | - | Chr7:19425805-19425824 | MsG0780037094.01.T01:CDS | 35.0% |
| AAAATCTTCATGACAGGAGC+AGG | + | Chr7:19426203-19426222 | None:intergenic | 40.0% | |
| AAACATACCTGAGCAACCAA+AGG | + | Chr7:19424392-19424411 | None:intergenic | 40.0% | |
| AACCTTCACCGTATACGAAA+AGG | + | Chr7:19425925-19425944 | None:intergenic | 40.0% | |
| ACCTGCTTTACAAACAGCAT+TGG | + | Chr7:19425886-19425905 | None:intergenic | 40.0% | |
| ACCTTCACCGTATACGAAAA+GGG | + | Chr7:19425924-19425943 | None:intergenic | 40.0% | |
| ATACTTAATCTCCCAGCAAG+AGG | + | Chr7:19424197-19424216 | None:intergenic | 40.0% | |
| ATGGAGTTTGTGAACTCATG+GGG | - | Chr7:19425456-19425475 | MsG0780037094.01.T01:intron | 40.0% | |
| CTATGGAGTTTGTGAACTCA+TGG | - | Chr7:19425454-19425473 | MsG0780037094.01.T01:intron | 40.0% | |
| GAATGCTTGTGAAGTGATCA+AGG | - | Chr7:19424139-19424158 | MsG0780037094.01.T01:CDS | 40.0% | |
| GTTTGATGGAATTGGAGCTA+TGG | - | Chr7:19425437-19425456 | MsG0780037094.01.T01:intron | 40.0% | |
| TACTTAATCTCCCAGCAAGA+GGG | + | Chr7:19424196-19424215 | None:intergenic | 40.0% | |
| TATTCTTCAGATGCCTCCTT+TGG | - | Chr7:19424373-19424392 | MsG0780037094.01.T01:CDS | 40.0% | |
| TCTCGATCGAAGCATACTAA+AGG | - | Chr7:19425518-19425537 | MsG0780037094.01.T01:intron | 40.0% | |
| TGGTGCAAATGCTCTATCTT+CGG | + | Chr7:19425555-19425574 | None:intergenic | 40.0% | |
| TTCATTACTACCCTCTTGCT+GGG | - | Chr7:19424183-19424202 | MsG0780037094.01.T01:CDS | 40.0% | |
| ! | ACCAATGCTGTTTGTAAAGC+AGG | - | Chr7:19425882-19425901 | MsG0780037094.01.T01:CDS | 40.0% |
| ! | ATTGTGGATTGTACTGGAGA+AGG | - | Chr7:19424236-19424255 | MsG0780037094.01.T01:CDS | 40.0% |
| ! | CCATTCCCAAAATACCCTTT+TGG | + | Chr7:19425852-19425871 | None:intergenic | 40.0% |
| ! | GAACAAGCCCTTTTCGTATA+CGG | - | Chr7:19425914-19425933 | MsG0780037094.01.T01:CDS | 40.0% |
| !! | CAAGTGTTGGTTCACTTGTT+AGG | + | Chr7:19424004-19424023 | None:intergenic | 40.0% |
| !!! | CCAAAAGGGTATTTTGGGAA+TGG | - | Chr7:19425849-19425868 | MsG0780037094.01.T01:CDS | 40.0% |
| AAACCTGATCCAAGGACTCT+TGG | - | Chr7:19424317-19424336 | MsG0780037094.01.T01:CDS | 45.0% | |
| AACAAGAGCTAGGCCATCTT+TGG | - | Chr7:19426010-19426029 | MsG0780037094.01.T01:CDS | 45.0% | |
| ACACCAAGACACCTCAAATC+CGG | - | Chr7:19424593-19424612 | MsG0780037094.01.T01:CDS | 45.0% | |
| ACCAACATACCAAGAGTCCT+TGG | + | Chr7:19424329-19424348 | None:intergenic | 45.0% | |
| AGTATGCTTCGATCGAGAAC+AGG | + | Chr7:19425516-19425535 | None:intergenic | 45.0% | |
| ATACCAAGAGTCCTTGGATC+AGG | + | Chr7:19424323-19424342 | None:intergenic | 45.0% | |
| CAGCTGACCAAGTTCAAATG+TGG | - | Chr7:19425378-19425397 | MsG0780037094.01.T01:intron | 45.0% | |
| CCGAAATCGGTGGTATGAAA+CGG | + | Chr7:19426071-19426090 | None:intergenic | 45.0% | |
| CTCAGAGGGTAAACTGATTG+TGG | - | Chr7:19424220-19424239 | MsG0780037094.01.T01:CDS | 45.0% | |
| CTGACCAAGTTCAAATGTGG+AGG | - | Chr7:19425381-19425400 | MsG0780037094.01.T01:intron | 45.0% | |
| GGTGCAAATGCTCTATCTTC+GGG | + | Chr7:19425554-19425573 | None:intergenic | 45.0% | |
| GTGCAAATGCTCTATCTTCG+GGG | + | Chr7:19425553-19425572 | None:intergenic | 45.0% | |
| GTTCATTACTACCCTCTTGC+TGG | - | Chr7:19424182-19424201 | MsG0780037094.01.T01:CDS | 45.0% | |
| TCCAAGGACTCTTGGTATGT+TGG | - | Chr7:19424325-19424344 | MsG0780037094.01.T01:CDS | 45.0% | |
| TCCTCTCTTGACCATGTGAA+AGG | + | Chr7:19426154-19426173 | None:intergenic | 45.0% | |
| TCCTTTCACATGGTCAAGAG+AGG | - | Chr7:19426150-19426169 | MsG0780037094.01.T01:exon | 45.0% | |
| TGAAACACGGACACAAACAC+AGG | - | Chr7:19424465-19424484 | MsG0780037094.01.T01:CDS | 45.0% | |
| TGCAAATGCTCTATCTTCGG+GGG | + | Chr7:19425552-19425571 | None:intergenic | 45.0% | |
| TGGAGTTTGTGAACTCATGG+GGG | - | Chr7:19425457-19425476 | MsG0780037094.01.T01:intron | 45.0% | |
| ! | ACACGATACAAACACCGACT+CGG | - | Chr7:19424494-19424513 | MsG0780037094.01.T01:CDS | 45.0% |
| !! | CCGTTTCATACCACCGATTT+CGG | - | Chr7:19426068-19426087 | MsG0780037094.01.T01:CDS | 45.0% |
| !! | TCAGATGGTGGAACAAGTGT+TGG | + | Chr7:19424017-19424036 | None:intergenic | 45.0% |
| !! | TCATACCACCGATTTCGGTT+GGG | - | Chr7:19426073-19426092 | MsG0780037094.01.T01:CDS | 45.0% |
| !! | TTCATACCACCGATTTCGGT+TGG | - | Chr7:19426072-19426091 | MsG0780037094.01.T01:CDS | 45.0% |
| AATCACTTCCTTCTCCGGCA+AGG | + | Chr7:19426126-19426145 | None:intergenic | 50.0% | |
| ATGCTTCGATCGAGAACAGG+AGG | + | Chr7:19425513-19425532 | None:intergenic | 50.0% | |
| CAAGTAAGCACGAACACTCC+CGG | + | Chr7:19424615-19424634 | None:intergenic | 50.0% | |
| CACCAAGACACCTCAAATCC+GGG | - | Chr7:19424594-19424613 | MsG0780037094.01.T01:CDS | 50.0% | |
| CATACCTGAGCAACCAAAGG+AGG | + | Chr7:19424389-19424408 | None:intergenic | 50.0% | |
| GGAGTTTGTGAACTCATGGG+GGG | - | Chr7:19425458-19425477 | MsG0780037094.01.T01:intron | 50.0% | |
| ! | GCCCTTTTCGTATACGGTGA+AGG | - | Chr7:19425920-19425939 | MsG0780037094.01.T01:CDS | 50.0% |
| ! | GTCGGTGTTTGTATCGTGTC+CGG | + | Chr7:19424493-19424512 | None:intergenic | 50.0% |
| !! | CATACCACCGATTTCGGTTG+GGG | - | Chr7:19426074-19426093 | MsG0780037094.01.T01:CDS | 50.0% |
| !! | TCTTGGTGTCAGACACGCAT+CGG | + | Chr7:19424582-19424601 | None:intergenic | 50.0% |
| ACGGACACAAACACAGGCAC+CGG | - | Chr7:19424471-19424490 | MsG0780037094.01.T01:CDS | 55.0% | |
| CACGAACACTCCCGGATTTG+AGG | + | Chr7:19424607-19424626 | None:intergenic | 55.0% | |
| CGATTTCGGTTGGGGAGAAC+CGG | - | Chr7:19426082-19426101 | MsG0780037094.01.T01:CDS | 55.0% | |
| CGGTTCTCCCCAACCGAAAT+CGG | + | Chr7:19426084-19426103 | None:intergenic | 55.0% | |
| GAAACCGGTCCAGACAGAAC+CGG | + | Chr7:19426104-19426123 | None:intergenic | 55.0% | |
| GATGCCTCCTTTGGTTGCTC+AGG | - | Chr7:19424382-19424401 | MsG0780037094.01.T01:CDS | 55.0% | |
| GCTCTATCTTCGGGGGATTG+CGG | + | Chr7:19425545-19425564 | None:intergenic | 55.0% | |
| TCATGGGGGGAACTAGCAAG+AGG | - | Chr7:19425471-19425490 | MsG0780037094.01.T01:intron | 55.0% | |
| TCCTTCTCCGGCAAGGAAAC+CGG | + | Chr7:19426119-19426138 | None:intergenic | 55.0% | |
| TCGATCGAGAACAGGAGGCA+CGG | + | Chr7:19425508-19425527 | None:intergenic | 55.0% | |
| TTCTCCCCAACCGAAATCGG+TGG | + | Chr7:19426081-19426100 | None:intergenic | 55.0% | |
| ! | AGAACAGGAGGCACGGAAAG+TGG | + | Chr7:19425501-19425520 | None:intergenic | 55.0% |
| ! | AGAACCGGTTCTGTCTGGAC+CGG | - | Chr7:19426097-19426116 | MsG0780037094.01.T01:CDS | 55.0% |
| ! | CTCCCGGATTTGAGGTGTCT+TGG | + | Chr7:19424599-19424618 | None:intergenic | 55.0% |
| ! | ACCGGTTTCCTTGCCGGAGA+AGG | - | Chr7:19426115-19426134 | MsG0780037094.01.T01:CDS | 60.0% |
| ! | GTCTGGACCGGTTTCCTTGC+CGG | - | Chr7:19426109-19426128 | MsG0780037094.01.T01:CDS | 60.0% |
| ! | TGGGGAGAACCGGTTCTGTC+TGG | - | Chr7:19426092-19426111 | MsG0780037094.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 19423697 | 19426407 | 19423697 | ID=MsG0780037094.01;Name=MsG0780037094.01 |
| Chr7 | mRNA | 19423697 | 19426407 | 19423697 | ID=MsG0780037094.01.T01;Parent=MsG0780037094.01;Name=MsG0780037094.01.T01;_AED=0.45;_eAED=0.45;_QI=124|1|1|1|0.5|0.33|3|163|437 |
| Chr7 | exon | 19423697 | 19424723 | 19423697 | ID=MsG0780037094.01.T01:exon:3821;Parent=MsG0780037094.01.T01 |
| Chr7 | exon | 19425701 | 19426175 | 19425701 | ID=MsG0780037094.01.T01:exon:3820;Parent=MsG0780037094.01.T01 |
| Chr7 | exon | 19426309 | 19426407 | 19426309 | ID=MsG0780037094.01.T01:exon:3819;Parent=MsG0780037094.01.T01 |
| Chr7 | five_prime_UTR | 19426309 | 19426407 | 19426309 | ID=MsG0780037094.01.T01:five_prime_utr;Parent=MsG0780037094.01.T01 |
| Chr7 | five_prime_UTR | 19426151 | 19426175 | 19426151 | ID=MsG0780037094.01.T01:five_prime_utr;Parent=MsG0780037094.01.T01 |
| Chr7 | CDS | 19425701 | 19426150 | 19425701 | ID=MsG0780037094.01.T01:cds;Parent=MsG0780037094.01.T01 |
| Chr7 | CDS | 19423860 | 19424723 | 19423860 | ID=MsG0780037094.01.T01:cds;Parent=MsG0780037094.01.T01 |
| Chr7 | three_prime_UTR | 19423697 | 19423859 | 19423697 | ID=MsG0780037094.01.T01:three_prime_utr;Parent=MsG0780037094.01.T01 |
| Gene Sequence |
| Protein sequence |
