AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000319.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000319.01.T01 MTR_1g018200 72.727 737 58 11 1 604 1 727 0.0 999
MsG0180000319.01.T01 MTR_2g039120 58.266 738 158 14 1 604 2 723 0.0 808
MsG0180000319.01.T01 MTR_2g039120 59.463 671 153 12 1 568 2 656 0.0 761
MsG0180000319.01.T01 MTR_2g039120 60.413 629 140 11 1 536 2 614 0.0 728
MsG0180000319.01.T01 MTR_8g016230 51.230 732 212 10 7 604 1 721 0.0 707
MsG0180000319.01.T01 MTR_2g039120 59.967 602 132 11 1 509 2 587 0.0 688
MsG0180000319.01.T01 MTR_2g100110 53.221 714 191 12 24 604 21 724 0.0 681
MsG0180000319.01.T01 MTR_3g112370 47.099 724 241 11 14 604 9 723 0.0 611
MsG0180000319.01.T01 MTR_2g100110 56.055 578 152 9 24 509 21 588 0.0 609
MsG0180000319.01.T01 MTR_1g023120 45.580 724 251 12 27 618 25 737 0.0 597
MsG0180000319.01.T01 MTR_5g021190 44.474 742 250 14 2 603 1 720 0.0 592
MsG0180000319.01.T01 MTR_2g094020 44.681 752 250 17 17 621 6 738 0.0 569
MsG0180000319.01.T01 MTR_2g094060 43.925 749 256 16 17 621 6 734 0.0 553
MsG0180000319.01.T01 MTR_2g094060 43.925 749 256 16 17 621 6 734 0.0 553
MsG0180000319.01.T01 MTR_1g023120 44.203 690 242 12 61 618 1 679 0.0 541
MsG0180000319.01.T01 MTR_2g094060 45.633 664 230 15 17 569 6 649 4.98e-176 525
MsG0180000319.01.T01 MTR_4g059680 41.393 761 290 15 17 634 6 753 3.99e-174 525
MsG0180000319.01.T01 MTR_1g018205 97.468 237 6 0 625 861 41 277 1.07e-161 472
MsG0180000319.01.T01 MTR_3g096900 41.071 728 278 15 18 604 14 731 6.25e-157 478
MsG0180000319.01.T01 MTR_3g096900 42.033 659 265 13 18 569 14 662 1.60e-146 449
MsG0180000319.01.T01 MTR_3g088520 40.506 711 277 21 10 603 6 687 2.98e-146 448
MsG0180000319.01.T01 MTR_3g096910 40.656 701 294 18 13 603 10 698 1.36e-141 436
MsG0180000319.01.T01 MTR_3g096900 42.251 613 247 11 18 533 14 616 7.84e-138 424
MsG0180000319.01.T01 MTR_4g073290 37.143 700 306 19 24 604 19 703 1.27e-132 416
MsG0180000319.01.T01 MTR_3g117840 36.657 712 318 20 24 618 29 724 1.61e-132 416
MsG0180000319.01.T01 MTR_2g042610 36.944 720 292 16 31 603 27 731 1.82e-129 408
MsG0180000319.01.T01 MTR_3g088520 39.302 659 257 19 61 603 1 632 8.20e-128 398
MsG0180000319.01.T01 MTR_8g085210 50.248 404 125 8 17 353 30 424 1.90e-117 379
MsG0180000319.01.T01 MTR_8g085210 33.083 266 131 5 418 641 553 813 6.11e-30 128
MsG0180000319.01.T01 MTR_3g096910 40.072 559 261 14 108 603 1 548 5.11e-111 352
MsG0180000319.01.T01 MTR_5g024080 50.445 337 111 4 22 311 2 329 1.30e-104 342
MsG0180000319.01.T01 MTR_5g024080 32.129 249 117 6 408 611 474 715 2.36e-24 110
MsG0180000319.01.T01 MTR_5g025830 50.305 328 108 4 31 311 28 347 3.00e-99 328
MsG0180000319.01.T01 MTR_5g025830 30.417 240 120 5 408 604 491 726 2.37e-23 106
MsG0180000319.01.T01 MTR_3g005570 43.210 405 168 7 13 365 5 399 4.05e-95 317
MsG0180000319.01.T01 MTR_3g005570 34.756 164 95 4 418 569 496 659 1.64e-19 94.4
MsG0180000319.01.T01 MTR_5g015580 53.814 236 109 0 626 861 41 276 1.28e-81 264
MsG0180000319.01.T01 MTR_4g126330 43.478 322 118 5 257 568 141 408 3.68e-65 225
MsG0180000319.01.T01 MTR_5g022590 37.975 316 125 11 50 328 11 292 2.20e-52 189
MsG0180000319.01.T01 MTR_6g011390 42.667 225 127 1 639 861 54 278 9.71e-51 180
MsG0180000319.01.T01 MTR_7g009330 39.462 223 135 0 639 861 55 277 4.34e-48 172
MsG0180000319.01.T01 MTR_4g128300 37.657 239 146 2 626 861 41 279 1.14e-44 162
MsG0180000319.01.T01 MTR_8g469150 37.220 223 140 0 639 861 54 276 1.92e-44 162
MsG0180000319.01.T01 MTR_8g469150 36.916 214 135 0 639 852 54 267 3.11e-41 153
MsG0180000319.01.T01 MTR_4g107840 26.633 199 137 3 670 861 48 244 5.91e-19 87.8
MsG0180000319.01.T01 MTR_6g007470 39.394 132 31 3 108 239 5 87 3.79e-18 84.7
MsG0180000319.01.T01 MTR_3g005610 31.633 196 116 5 418 595 85 280 1.10e-17 85.5
MsG0180000319.01.T01 MTR_8g076800 70.833 48 14 0 108 155 12 59 1.26e-14 75.5
MsG0180000319.01.T01 MTR_2g059440 29.952 207 121 9 408 595 78 279 9.23e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000319.01.T01 AT4G26140 51.303 729 211 14 8 604 7 723 0.0 705
MsG0180000319.01.T01 AT4G26140 49.735 754 210 15 8 604 7 748 0.0 692
MsG0180000319.01.T01 AT5G56870 53.250 723 194 15 13 604 12 721 0.0 690
MsG0180000319.01.T01 AT3G13750 47.509 823 263 16 17 704 20 808 0.0 687
MsG0180000319.01.T01 AT3G52840 49.932 737 223 15 3 604 51 776 0.0 674
MsG0180000319.01.T01 AT3G52840 50.904 719 211 15 17 604 15 722 0.0 672
MsG0180000319.01.T01 AT4G26140 51.237 687 197 13 8 568 7 681 0.0 657
MsG0180000319.01.T01 AT4G26140 54.634 615 178 11 8 533 7 609 0.0 642
MsG0180000319.01.T01 AT4G26140 54.634 615 178 11 8 533 7 609 0.0 642
MsG0180000319.01.T01 AT4G26140 54.457 617 178 11 8 533 7 611 0.0 642
MsG0180000319.01.T01 AT4G36360 45.667 727 238 14 16 604 22 729 0.0 607
MsG0180000319.01.T01 AT4G36360 45.667 727 238 14 16 604 22 729 0.0 607
MsG0180000319.01.T01 AT1G45130 45.467 728 246 12 16 604 12 727 0.0 595
MsG0180000319.01.T01 AT4G26140 53.514 555 155 11 8 471 7 549 0.0 555
MsG0180000319.01.T01 AT2G28470 44.220 744 244 18 29 622 30 752 0.0 548
MsG0180000319.01.T01 AT2G28470 44.220 744 244 18 29 622 24 746 0.0 548
MsG0180000319.01.T01 AT2G28470 44.220 744 244 18 29 622 30 752 0.0 548
MsG0180000319.01.T01 AT2G28470 44.220 744 244 18 29 622 24 746 0.0 548
MsG0180000319.01.T01 AT4G26140 51.379 580 154 12 8 471 7 574 0.0 541
MsG0180000319.01.T01 AT4G26140 51.379 580 154 12 8 471 7 574 0.0 541
MsG0180000319.01.T01 AT2G28470 45.662 657 220 16 29 569 30 665 5.21e-171 512
MsG0180000319.01.T01 AT1G45130 45.997 587 217 9 106 604 74 648 2.55e-165 496
MsG0180000319.01.T01 AT5G63810 40.109 733 284 15 13 603 14 733 4.65e-157 478
MsG0180000319.01.T01 AT5G63800 39.832 713 304 19 5 603 1 702 9.90e-139 429
MsG0180000319.01.T01 AT1G77410 38.034 702 310 22 12 603 6 692 1.62e-134 421
MsG0180000319.01.T01 AT1G77410 37.765 707 310 23 12 603 6 697 6.27e-132 414
MsG0180000319.01.T01 AT5G20710 36.575 730 310 18 14 603 12 728 2.36e-128 405
MsG0180000319.01.T01 AT2G32810 50.358 419 138 10 1 358 1 410 1.57e-121 389
MsG0180000319.01.T01 AT2G32810 32.184 261 125 6 418 630 532 788 3.66e-28 122
MsG0180000319.01.T01 AT2G32810 50.358 419 138 10 1 358 1 410 1.89e-121 388
MsG0180000319.01.T01 AT2G32810 32.184 261 125 6 418 630 532 788 4.57e-28 122
MsG0180000319.01.T01 AT2G16730 34.911 676 318 13 30 593 43 708 2.13e-121 387
MsG0180000319.01.T01 AT4G35010 34.417 677 320 13 30 593 40 705 1.22e-117 377
MsG0180000319.01.T01 AT1G77410 38.819 559 264 20 108 603 43 586 8.74e-105 340
MsG0180000319.01.T01 AT1G77410 38.819 559 264 20 108 603 43 586 8.74e-105 340
MsG0180000319.01.T01 AT1G31740 44.730 389 155 6 13 354 7 382 5.38e-104 340
MsG0180000319.01.T01 AT1G31740 37.624 202 97 7 418 603 494 682 4.40e-26 115
MsG0180000319.01.T01 AT4G38590 33.282 646 308 16 61 593 1 636 7.86e-98 324
MsG0180000319.01.T01 AT4G38590 32.017 709 346 17 12 596 7 703 8.57e-98 329
MsG0180000319.01.T01 AT5G67500 52.966 236 111 0 626 861 41 276 5.12e-79 257
MsG0180000319.01.T01 AT5G67500 52.966 236 111 0 626 861 68 303 1.05e-78 257
MsG0180000319.01.T01 AT5G67500 51.982 227 109 0 626 852 41 267 2.98e-73 243
MsG0180000319.01.T01 AT5G20710 33.084 535 253 15 162 603 1 523 2.04e-71 247
MsG0180000319.01.T01 AT5G15090 43.750 224 122 2 639 861 54 274 2.44e-54 190
MsG0180000319.01.T01 AT5G15090 43.750 224 122 2 639 861 54 274 2.44e-54 190
MsG0180000319.01.T01 AT3G01280 39.834 241 145 0 621 861 36 276 7.93e-49 174
MsG0180000319.01.T01 AT5G57490 37.607 234 144 1 628 861 43 274 1.91e-46 167
MsG0180000319.01.T01 AT3G49920 35.593 236 102 3 626 861 41 226 4.29e-32 125
MsG0180000319.01.T01 AT2G04060 29.363 361 193 12 257 593 23 345 3.01e-27 116
MsG0180000319.01.T01 AT2G04062 38.365 159 68 4 25 155 1 157 1.82e-23 98.2

Find 207 sgRNAs with CRISPR-Local

Find 560 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTCAAACCTATGTATTT+TGG 0.134516 1:-4389954 MsG0180000319.01.T01:CDS
TTTGTTAATGGTCAACTTTC+AGG 0.158124 1:-4387362 MsG0180000319.01.T01:intron
CCAATTCTCAGTCCACATTT+TGG 0.160554 1:+4388749 None:intergenic
AAATATCTTCGTTACATTTC+AGG 0.172694 1:+4389913 None:intergenic
TTTACCTGAGACATAATTAT+TGG 0.179827 1:+4389358 None:intergenic
TATCATGGAGGAACTAATTT+TGG 0.185484 1:-4388382 MsG0180000319.01.T01:CDS
ACTAATTTCATGCAGGTTAA+TGG 0.191236 1:-4387749 MsG0180000319.01.T01:intron
CTTTCACTAAATGTTAATTT+AGG 0.219363 1:+4387225 None:intergenic
GCTGAATTTACAAATTTAAA+TGG 0.221489 1:+4387404 None:intergenic
TTTCATCATGTTCACAATTT+TGG 0.227558 1:+4389411 None:intergenic
CTGGAAAGGCTTACACAAAA+TGG 0.230100 1:-4389137 MsG0180000319.01.T01:CDS
AAGAGTAGAGGGCTCTCTTC+TGG 0.287936 1:-4384105 MsG0180000319.01.T01:CDS
TTGAGCCTTCATACCATAAC+TGG 0.288620 1:-4386784 MsG0180000319.01.T01:CDS
TCTTGTTATTGCCGACCTTT+AGG 0.289024 1:+4387196 None:intergenic
TCTAGACCCTTCAATGTTAC+TGG 0.308225 1:+4386973 None:intergenic
CATAGCTTGTGGCAATAAAA+AGG 0.308874 1:+4388344 None:intergenic
GATATCAATTGTTGGTTTCA+TGG 0.308943 1:-4382234 MsG0180000319.01.T01:three_prime_UTR
TTCTATAGGTACACTGATTT+CGG 0.310712 1:-4388625 MsG0180000319.01.T01:intron
CACAAAATGGGCTGCTCAAA+TGG 0.319547 1:-4389124 MsG0180000319.01.T01:CDS
ATGGACATAGCTTCCATAAA+AGG 0.323182 1:-4387730 MsG0180000319.01.T01:CDS
TGTACCTCGGGTGTGCTTCT+TGG 0.329719 1:+4391294 None:intergenic
CCATCATAGCAATGCACTTT+GGG 0.338593 1:-4387634 MsG0180000319.01.T01:CDS
GGTACTCCTGGTATTGCGTT+TGG 0.355399 1:-4383356 MsG0180000319.01.T01:CDS
TAGTGTTGCTGTGGGTCTTC+CGG 0.356885 1:-4387163 MsG0180000319.01.T01:intron
GACTTCCAAATGAACCAAAA+TGG 0.361446 1:-4388214 MsG0180000319.01.T01:CDS
TGCATACCATATTCATCAAT+AGG 0.379546 1:+4388310 None:intergenic
CACAAAGCCCTTGTGATTGA+TGG 0.381962 1:-4391354 MsG0180000319.01.T01:CDS
CTGGAAGTTCCTCCATTGAT+TGG 0.382186 1:-4386765 MsG0180000319.01.T01:CDS
TTTGCCTTCACAGTTGTTTG+AGG 0.384553 1:+4382486 None:intergenic
AACAATCCCTAATACCTTGC+CGG 0.385911 1:+4383547 None:intergenic
TGATAGATCGAGAATGAGTA+TGG 0.388987 1:-4389186 MsG0180000319.01.T01:intron
GGACCTGTGGAATGGGAAAT+TGG 0.390507 1:-4389165 MsG0180000319.01.T01:CDS
GATGCTCCTATTGATGAATA+TGG 0.390606 1:-4388316 MsG0180000319.01.T01:intron
ACATGGAATGTTGGGGTGTT+AGG 0.391351 1:-4386997 MsG0180000319.01.T01:CDS
TTCAATTAGGATATTATCAA+TGG 0.399059 1:+4382125 None:intergenic
CCAAAATGTGGACTGAGAAT+TGG 0.399232 1:-4388749 MsG0180000319.01.T01:CDS
TCTTCAAATGATTGATTGGT+TGG 0.403323 1:-4382194 MsG0180000319.01.T01:three_prime_UTR
TTGGAAAATAGTCCCAAGTT+TGG 0.403788 1:-4382369 MsG0180000319.01.T01:CDS
ACGAAATTGATATCAATTGT+TGG 0.404102 1:-4382242 MsG0180000319.01.T01:three_prime_UTR
CCCAAAGTGCATTGCTATGA+TGG 0.414563 1:+4387634 None:intergenic
TTATATTTGATTGTATATCA+TGG 0.414932 1:-4388397 MsG0180000319.01.T01:CDS
GAGACTTGTCTTGGCAGAAA+TGG 0.417613 1:-4386939 MsG0180000319.01.T01:CDS
TTTAAATTTGTAAATTCAGC+AGG 0.420684 1:-4387401 MsG0180000319.01.T01:CDS
ACCTTGCCGGATTTGTAGTC+AGG 0.424993 1:+4383560 None:intergenic
TCTTTACTTAGTGTTGCTGT+GGG 0.428806 1:-4387171 MsG0180000319.01.T01:CDS
TTCTTTACTTAGTGTTGCTG+TGG 0.433115 1:-4387172 MsG0180000319.01.T01:CDS
AACAAAAGACACACCATTGT+TGG 0.435048 1:-4391526 MsG0180000319.01.T01:five_prime_UTR
AGAGAGTTTGTTTCAAACTC+AGG 0.436146 1:-4389386 MsG0180000319.01.T01:CDS
ACAAATTTAAATGGTAAGGT+AGG 0.439317 1:+4387413 None:intergenic
TTATTGTCTTTGTGGGTTTG+TGG 0.439850 1:-4391402 MsG0180000319.01.T01:CDS
ACAAAAGACACACCATTGTT+GGG 0.443066 1:-4391525 MsG0180000319.01.T01:five_prime_UTR
TGACCCTACTGGAATTTCAT+TGG 0.446479 1:-4386238 MsG0180000319.01.T01:intron
CTTGGTTGTGCTTGAAGAAT+GGG 0.453865 1:-4386265 MsG0180000319.01.T01:CDS
TTGGACACAAGGATCATCAT+TGG 0.454214 1:-4386746 MsG0180000319.01.T01:intron
GTTGGATAGGTTGGACTAAA+GGG 0.457143 1:-4386814 MsG0180000319.01.T01:intron
CCTTAGAGGGGTTTAAAATA+CGG 0.457765 1:-4382327 MsG0180000319.01.T01:exon
AGGTCATTCTTGACAATCTC+TGG 0.460118 1:-4382411 MsG0180000319.01.T01:CDS
TGGAAAGGCTTACACAAAAT+GGG 0.465526 1:-4389136 MsG0180000319.01.T01:CDS
GTGGAGAACCAACACAGAAA+TGG 0.465677 1:-4386418 MsG0180000319.01.T01:CDS
TAGTGAAAGTGTTAACCTAA+AGG 0.466295 1:-4387211 MsG0180000319.01.T01:CDS
CTTCGTTACATTTCAGGAGA+AGG 0.467873 1:+4389919 None:intergenic
GGTAAACTTACAACGGGATC+AGG 0.468492 1:+4389048 None:intergenic
CAAAAGTGAGAAACCAAACT+TGG 0.468557 1:+4382356 None:intergenic
AAATCTTACCATTTCTGTGT+TGG 0.468836 1:+4386410 None:intergenic
TCAAATTAATACCAGAATGT+TGG 0.472200 1:-4387033 MsG0180000319.01.T01:intron
TCTGCGACAATTGGTACTCC+TGG 0.472444 1:-4383368 MsG0180000319.01.T01:CDS
TCCATCATAGCAATGCACTT+TGG 0.474891 1:-4387635 MsG0180000319.01.T01:CDS
TGGTCCAATAATTATGTCTC+AGG 0.477103 1:-4389362 MsG0180000319.01.T01:intron
TTGGGTTTAAAGTTCTCGTT+GGG 0.479071 1:+4388768 None:intergenic
ACTTTGAAACATGGAATGTT+GGG 0.479098 1:-4387005 MsG0180000319.01.T01:CDS
TTATTTCAAAAGGCTAAAGA+TGG 0.480940 1:-4389988 MsG0180000319.01.T01:CDS
GTGGCCAGACTTATTTCAAA+AGG 0.481426 1:-4389998 MsG0180000319.01.T01:CDS
CAATATCTTCATGATCATGC+TGG 0.482402 1:-4383437 MsG0180000319.01.T01:CDS
CGATTACCTGACTACAAATC+CGG 0.483135 1:-4383566 MsG0180000319.01.T01:CDS
AACTTTACAAAGTATAATGC+TGG 0.483313 1:-4383302 MsG0180000319.01.T01:CDS
CGGGTGTGCTTCTTGGATAG+TGG 0.483949 1:+4391301 None:intergenic
CGTGACCTAGAAAAGTTGAA+TGG 0.484411 1:-4382591 MsG0180000319.01.T01:CDS
AATGGAGGAACTTCCAGTTA+TGG 0.487302 1:+4386771 None:intergenic
GCCAACATGTGTGGAGTAGC+TGG 0.487400 1:+4383325 None:intergenic
CACTTTGAAACATGGAATGT+TGG 0.488183 1:-4387006 MsG0180000319.01.T01:CDS
TCTTGGTTGTGCTTGAAGAA+TGG 0.488347 1:-4386266 MsG0180000319.01.T01:CDS
AGTACTGAAGCACTGGAACT+TGG 0.489642 1:+4383263 None:intergenic
GTCTAGATACTGGTGTACCT+TGG 0.490231 1:-4389095 MsG0180000319.01.T01:CDS
TTCCAATGCCTTTGTTTCGA+AGG 0.490558 1:+4382386 None:intergenic
TCTAGATACTGGTGTACCTT+GGG 0.490711 1:-4389094 MsG0180000319.01.T01:CDS
ATTTACAAATTTAAATGGTA+AGG 0.494877 1:+4387409 None:intergenic
TGCCTTCGAAACAAAGGCAT+TGG 0.498230 1:-4382388 MsG0180000319.01.T01:CDS
TTACAAAAGTACTGAAGCAC+TGG 0.498266 1:+4383256 None:intergenic
CGACACAAAATCTGCGGCAA+CGG 0.500314 1:-4387945 MsG0180000319.01.T01:intron
CCGTGGATACTACATTTGAT+TGG 0.501200 1:-4387700 MsG0180000319.01.T01:CDS
GAATGGGGAGGTGACCCTAC+TGG 0.503961 1:-4386249 MsG0180000319.01.T01:CDS
GATCCTACAGTCACATGGCT+TGG 0.504519 1:-4388131 MsG0180000319.01.T01:CDS
CCAAAATGCAGGACAAATTG+TGG 0.507299 1:-4386437 MsG0180000319.01.T01:intron
TATCCTAATTGAAAACTAGT+TGG 0.508614 1:-4382115 MsG0180000319.01.T01:three_prime_UTR
ATGGCTGTAGGTCTAGATAC+TGG 0.511595 1:-4389105 MsG0180000319.01.T01:CDS
ACGCAAGTACGATACCTTCA+TGG 0.512055 1:+4382611 None:intergenic
GCTGCCACTCGGCGCGTCAA+AGG 0.512668 1:+4386597 None:intergenic
GAATGGGAAATTGGTGCTCC+TGG 0.513051 1:-4389156 MsG0180000319.01.T01:CDS
TGTTGGATAGGTTGGACTAA+AGG 0.513449 1:-4386815 MsG0180000319.01.T01:intron
GTGACCTAGAAAAGTTGAAT+GGG 0.513987 1:-4382590 MsG0180000319.01.T01:CDS
ATGTGGACTGAGAATTGGTC+TGG 0.514008 1:-4388744 MsG0180000319.01.T01:CDS
TACAAATGAGAACACGTTGA+CGG 0.515648 1:-4382532 MsG0180000319.01.T01:CDS
GAGAGTTTGTTTCAAACTCA+GGG 0.516652 1:-4389385 MsG0180000319.01.T01:CDS
CTAGACCCTTCAATGTTACT+GGG 0.516715 1:+4386974 None:intergenic
CCTAATTGAAAACTAGTTGG+TGG 0.517706 1:-4382112 None:intergenic
TTCTTTGTCCATCAATCACA+AGG 0.521053 1:+4391346 None:intergenic
ATGTCCATTCCAAAATACAT+AGG 0.521663 1:+4389945 None:intergenic
CTACTCATATCTAGTGCCAC+TGG 0.522187 1:+4386571 None:intergenic
TGGATAGGTATCATATTCCT+CGG 0.523367 1:-4386314 MsG0180000319.01.T01:intron
AACTTCCAGTTATGGTATGA+AGG 0.525743 1:+4386779 None:intergenic
ATGAATGTAGGAACTGTGTA+TGG 0.525837 1:-4387261 MsG0180000319.01.T01:intron
ATCTCCTCCTCCACCAACTC+CGG 0.528597 1:-4384245 MsG0180000319.01.T01:intron
GACGGTTGGATGTTCTTATG+TGG 0.530136 1:-4382514 MsG0180000319.01.T01:CDS
GAGACCGGAGTTGGTGGAGG+AGG 0.531862 1:+4384241 None:intergenic
TCTTGCTTGCACATGTCCCA+AGG 0.532274 1:+4389078 None:intergenic
TTGGCAGAAATGGTCTTACA+AGG 0.535055 1:-4386929 MsG0180000319.01.T01:intron
GGAGTTGGTGGAGGAGGAGA+TGG 0.535242 1:+4384247 None:intergenic
TTTGGGTTTAAAGTTCTCGT+TGG 0.535843 1:+4388767 None:intergenic
GTTAGGCCCAGTAACATTGA+AGG 0.535870 1:-4386980 MsG0180000319.01.T01:CDS
CTCTGGTGCCTTCGAAACAA+AGG 0.537828 1:-4382394 MsG0180000319.01.T01:CDS
GCCACTGGATCGCTGCCACT+CGG 0.538573 1:+4386586 None:intergenic
AGGAACTGTGTATGGAGGAT+TGG 0.540099 1:-4387253 MsG0180000319.01.T01:CDS
TATGATGGAATCGTCGTCAC+TGG 0.542393 1:+4387649 None:intergenic
TCGTCGTCACTGGAGTAGGC+AGG 0.545444 1:+4387659 None:intergenic
AGGGGACAAGAGACTTGTCT+TGG 0.546148 1:-4386948 MsG0180000319.01.T01:CDS
CTACATTATTGAAGAGTAGA+GGG 0.548508 1:-4384116 MsG0180000319.01.T01:CDS
TCATAGACCAACTGAAGACT+TGG 0.549584 1:-4388590 MsG0180000319.01.T01:CDS
ACATTGAAGGGTCTAGATGA+GGG 0.549862 1:-4386967 MsG0180000319.01.T01:CDS
TGAGTATGGACCTGTGGAAT+GGG 0.552441 1:-4389172 MsG0180000319.01.T01:CDS
GAGTCCAAGTGGGAACGTCT+TGG 0.553534 1:-4386283 MsG0180000319.01.T01:CDS
GGTATCATATTCCTCGGTCA+TGG 0.554459 1:-4386308 MsG0180000319.01.T01:CDS
GGAATCGTCGTCACTGGAGT+AGG 0.554946 1:+4387655 None:intergenic
TGATCCTTGTGTCCAATCAA+TGG 0.555014 1:+4386753 None:intergenic
GCACCAATTTCCCATTCCAC+AGG 0.555297 1:+4389162 None:intergenic
TTTCCAAGCCATGTGACTGT+AGG 0.556295 1:+4388128 None:intergenic
GGACTGAGAATTGGTCTGGC+TGG 0.561829 1:-4388740 MsG0180000319.01.T01:intron
TCTGCTCCAAACGCAATACC+AGG 0.563089 1:+4383350 None:intergenic
CCAATCAAATGTAGTATCCA+CGG 0.564185 1:+4387700 None:intergenic
AATGAGAACACGTTGACGGT+TGG 0.566215 1:-4382528 MsG0180000319.01.T01:CDS
GCACTAGATATGAGTAGCAT+GGG 0.566286 1:-4386565 MsG0180000319.01.T01:CDS
GGCACTAGATATGAGTAGCA+TGG 0.566466 1:-4386566 MsG0180000319.01.T01:CDS
GGAAATTGGTGCTCCTGGAA+AGG 0.566691 1:-4389151 MsG0180000319.01.T01:CDS
TCTACATTATTGAAGAGTAG+AGG 0.566741 1:-4384117 MsG0180000319.01.T01:CDS
TGGGCTGCTCAAATGGCTGT+AGG 0.566955 1:-4389117 MsG0180000319.01.T01:CDS
CATAGGTTTGAATAACATCA+AGG 0.569765 1:+4389962 None:intergenic
ATGAGTATGGACCTGTGGAA+TGG 0.571228 1:-4389173 MsG0180000319.01.T01:CDS
TCCTCCATTGATTGGACACA+AGG 0.572202 1:-4386757 MsG0180000319.01.T01:CDS
TAAATCATACACAGTGACAA+TGG 0.574202 1:+4382152 None:intergenic
TTTCAAAAGGCTAAAGATGG+AGG 0.574864 1:-4389985 MsG0180000319.01.T01:CDS
ATTACTTACGAGACCGGAGT+TGG 0.577626 1:+4384232 None:intergenic
CTGTGGATCCTACAGTCACA+TGG 0.578432 1:-4388136 MsG0180000319.01.T01:CDS
TACGAGACCGGAGTTGGTGG+AGG 0.578933 1:+4384238 None:intergenic
GGATCCACAGAAATCAAAGC+TGG 0.580873 1:+4388149 None:intergenic
ACTTACGAGACCGGAGTTGG+TGG 0.580927 1:+4384235 None:intergenic
GCCGAGTGGCAGCGATCCAG+TGG 0.582197 1:-4386587 MsG0180000319.01.T01:CDS
TGAGCCAGCTTTGATTTCTG+TGG 0.583476 1:-4388153 MsG0180000319.01.T01:CDS
TCACCAATGAAATTCCAGTA+GGG 0.584721 1:+4386235 None:intergenic
TGCTAGATTCATACAAATCG+TGG 0.587447 1:-4388557 MsG0180000319.01.T01:CDS
AACATTGAAGGGTCTAGATG+AGG 0.588983 1:-4386968 MsG0180000319.01.T01:CDS
GAAGCAAGAACTTTCGCAGA+AGG 0.589015 1:+4383593 None:intergenic
AGATATGAGTAGCATGGGAA+AGG 0.590088 1:-4386560 MsG0180000319.01.T01:intron
TTCACCAATGAAATTCCAGT+AGG 0.593759 1:+4386234 None:intergenic
ACCAGCTACTCCACACATGT+TGG 0.594917 1:-4383326 MsG0180000319.01.T01:CDS
CAATCAAATGTAGTATCCAC+GGG 0.596448 1:+4387701 None:intergenic
TGTCAAGCTAGCACAACAGC+TGG 0.597587 1:-4389783 MsG0180000319.01.T01:intron
TTGTAGATTGACACTTGCAA+TGG 0.599307 1:-4388813 MsG0180000319.01.T01:intron
ACAACCAAGACGTTCCCACT+TGG 0.601417 1:+4386279 None:intergenic
TGATCCTCAAACAACTGTGA+AGG 0.605878 1:-4382490 MsG0180000319.01.T01:CDS
GAAAGTGTTAACCTAAAGGT+CGG 0.607496 1:-4387207 MsG0180000319.01.T01:CDS
AAGGAATGCAGCACAGACAC+TGG 0.612057 1:+4387976 None:intergenic
AGAACTTTAAACCCAAAATG+TGG 0.614315 1:-4388761 MsG0180000319.01.T01:CDS
TGTGCTTCTTGGATAGTGGA+TGG 0.615066 1:+4391305 None:intergenic
TTGGTCTGCACTTTGAAACA+TGG 0.615627 1:-4387014 MsG0180000319.01.T01:CDS
CGGTCATGGTTGAGTCCAAG+TGG 0.619900 1:-4386294 MsG0180000319.01.T01:CDS
GCGATTCTTCAGATTATCTG+TGG 0.622203 1:-4387593 MsG0180000319.01.T01:intron
GAACAACCATGGCAATCTTG+AGG 0.623026 1:-4382460 MsG0180000319.01.T01:CDS
GAGTATGCCAAGTCTTCAGT+TGG 0.624897 1:+4388583 None:intergenic
TATAGGTACACTGATTTCGG+TGG 0.628326 1:-4388622 MsG0180000319.01.T01:intron
CGAGAATGAGTATGGACCTG+TGG 0.628829 1:-4389178 MsG0180000319.01.T01:CDS
TTAGGCCCAGTAACATTGAA+GGG 0.630859 1:-4386979 MsG0180000319.01.T01:CDS
TGTAAAGTTGCCAACATGTG+TGG 0.636487 1:+4383316 None:intergenic
AGCATCATAATCATAGCTTG+TGG 0.636529 1:+4388333 None:intergenic
TTGTGGGAGAAATTAGCAGA+AGG 0.636698 1:-4382560 MsG0180000319.01.T01:CDS
TTGGTTGTGCTTGAAGAATG+GGG 0.644178 1:-4386264 MsG0180000319.01.T01:CDS
AAAAGTGAGAAACCAAACTT+GGG 0.644483 1:+4382357 None:intergenic
TGACCTAGAAAAGTTGAATG+GGG 0.648872 1:-4382589 MsG0180000319.01.T01:CDS
AAGGCAAAGCTGAACAACCA+TGG 0.652579 1:-4382471 MsG0180000319.01.T01:CDS
TATTTGATTGTATATCATGG+AGG 0.658438 1:-4388394 MsG0180000319.01.T01:CDS
TCTTTGTCCATCAATCACAA+GGG 0.658868 1:+4391347 None:intergenic
CCATAAAAGGATGACTCCCG+TGG 0.660532 1:-4387717 MsG0180000319.01.T01:CDS
CATTGAAGGGTCTAGATGAG+GGG 0.664668 1:-4386966 MsG0180000319.01.T01:CDS
ACCTGACTACAAATCCGGCA+AGG 0.666565 1:-4383561 MsG0180000319.01.T01:intron
ATACAGCCTCAAGATTGCCA+TGG 0.667511 1:+4382454 None:intergenic
TGACAAGGGAGACTCCATGA+AGG 0.670618 1:-4382625 MsG0180000319.01.T01:CDS
GACCTAGAAAAGTTGAATGG+GGG 0.671119 1:-4382588 MsG0180000319.01.T01:CDS
ACAACCTTTGACGCGCCGAG+TGG 0.672410 1:-4386601 MsG0180000319.01.T01:CDS
TGCAACATCATCTTACACAT+AGG 0.672932 1:-4382431 MsG0180000319.01.T01:CDS
AATGTAGGAACTGTGTATGG+AGG 0.675173 1:-4387258 MsG0180000319.01.T01:intron
CTTTGAAACATGGAATGTTG+GGG 0.679854 1:-4387004 MsG0180000319.01.T01:CDS
TCCTTGTGTCCAATCAATGG+AGG 0.680608 1:+4386756 None:intergenic
CTTGGACTCAACCATGACCG+AGG 0.682721 1:+4386297 None:intergenic
GGTCATGGTTGAGTCCAAGT+GGG 0.689731 1:-4386293 MsG0180000319.01.T01:CDS
AAACTACGACACAAAATCTG+CGG 0.691374 1:-4387951 MsG0180000319.01.T01:CDS
AGTTTGTTTCAAACTCAGGG+TGG 0.697300 1:-4389382 MsG0180000319.01.T01:CDS
CTATCCAAGAAGCACACCCG+AGG 0.711494 1:-4391298 MsG0180000319.01.T01:intron
TGGTAAGATTTCATATAACG+AGG 0.715810 1:-4386398 MsG0180000319.01.T01:intron
GTTGTGCTTGAAGAATGGGG+AGG 0.774502 1:-4386261 MsG0180000319.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTTTTTTTTTTTTTA+GGG + Chr1:4384385-4384404 None:intergenic 0.0%
!!! TTATTATTTTTTTTTTTTTT+AGG + Chr1:4384386-4384405 None:intergenic 0.0%
!! AAACAATAAAAATAAAAAAG+AGG + Chr1:4389093-4389112 None:intergenic 10.0%
!! AAATTTAAACCATATTAATT+TGG + Chr1:4387472-4387491 None:intergenic 10.0%
!! TTCATATAATAAAATAAAGA+AGG + Chr1:4382857-4382876 None:intergenic 10.0%
!!! AATTTTACTTATATTATAAC+CGG + Chr1:4382972-4382991 None:intergenic 10.0%
!!! ATAAAATTCCAAATTTTTAA+TGG + Chr1:4386122-4386141 None:intergenic 10.0%
!!! ATATCTAATTTTTTATAAGT+TGG - Chr1:4382908-4382927 MsG0180000319.01.T01:intron 10.0%
!!! ATATTTATAGCTTTAAATAA+TGG + Chr1:4384952-4384971 None:intergenic 10.0%
!!! CTTTTTTTTTTTTTTTTTGA+TGG + Chr1:4388230-4388249 None:intergenic 10.0%
!!! TAACTTAACATTTTAAATAA+TGG + Chr1:4383194-4383213 None:intergenic 10.0%
!!! TTAATTTAAATGAACTTTTT+AGG + Chr1:4382705-4382724 None:intergenic 10.0%
!!! TTTTATTATAAAGTTTTTGT+TGG - Chr1:4384331-4384350 MsG0180000319.01.T01:intron 10.0%
!!! TTTTTTTTCTCAAAAAAATA+AGG + Chr1:4383504-4383523 None:intergenic 10.0%
!! AAAATGTTAAGTTATTTGAT+TGG - Chr1:4383200-4383219 MsG0180000319.01.T01:intron 15.0%
!! AAAGCTATAAATATTTCATT+TGG - Chr1:4384958-4384977 MsG0180000319.01.T01:intron 15.0%
!! AAATTACATTTCAAATTCAA+TGG + Chr1:4388851-4388870 None:intergenic 15.0%
!! AAGAGAAACAAATTTATTTA+TGG + Chr1:4387704-4387723 None:intergenic 15.0%
!! AAGCTATAAATATTTCATTT+GGG - Chr1:4384959-4384978 MsG0180000319.01.T01:intron 15.0%
!! AATGAATAAATAAAAGAGAA+AGG + Chr1:4382450-4382469 None:intergenic 15.0%
!! ATTAAGTTATATATGAATGT+AGG - Chr1:4386369-4386388 MsG0180000319.01.T01:intron 15.0%
!! ATTTAATCTAATACTGAAAT+TGG - Chr1:4384419-4384438 MsG0180000319.01.T01:intron 15.0%
!! ATTTACAAATTTAAATGGTA+AGG + Chr1:4386236-4386255 None:intergenic 15.0%
!! CTTTACAAAAATTTATCATT+AGG + Chr1:4386198-4386217 None:intergenic 15.0%
!! TCTTAAAACCATTAAAAATT+TGG - Chr1:4386111-4386130 MsG0180000319.01.T01:intron 15.0%
!! TTAATTCAAAATATTATGGA+GGG + Chr1:4382594-4382613 None:intergenic 15.0%
!! TTATATTTGATTGTATATCA+TGG - Chr1:4385245-4385264 MsG0180000319.01.T01:intron 15.0%
!! TTTAATTCAAAATATTATGG+AGG + Chr1:4382595-4382614 None:intergenic 15.0%
!!! AAATCAACAATAAGATTTTT+AGG - Chr1:4388317-4388336 MsG0180000319.01.T01:CDS 15.0%
!!! AACAAACATATACATAATTT+TGG + Chr1:4382496-4382515 None:intergenic 15.0%
!!! AACAGTCAAATTTTAAAATA+AGG - Chr1:4382768-4382787 MsG0180000319.01.T01:intron 15.0%
!!! ATATAAAAGATATTGACTTT+TGG + Chr1:4383291-4383310 None:intergenic 15.0%
!!! ATTTTTATTTTTACTTGGAT+GGG - Chr1:4390792-4390811 MsG0180000319.01.T01:intron 15.0%
!!! ATTTTTGCTTATATAATGAT+AGG - Chr1:4383074-4383093 MsG0180000319.01.T01:intron 15.0%
!!! TGATAAATTTTTGTAAAGAA+TGG - Chr1:4386200-4386219 MsG0180000319.01.T01:intron 15.0%
!!! TTTTAATTAATCCAAACTTT+TGG - Chr1:4384167-4384186 MsG0180000319.01.T01:intron 15.0%
!!! TTTTTGCTTATATAATGATA+GGG - Chr1:4383075-4383094 MsG0180000319.01.T01:intron 15.0%
!!! TTTTTGTTATATATTACATC+CGG - Chr1:4382950-4382969 MsG0180000319.01.T01:intron 15.0%
!!! TTTTTTGTTAATGTAATCTT+AGG - Chr1:4385622-4385641 MsG0180000319.01.T01:intron 15.0%
!!! TTTTTTTTAATCTTTTGGAT+AGG - Chr1:4387313-4387332 MsG0180000319.01.T01:intron 15.0%
!! AAAATAAAAAATGTGCATGT+TGG + Chr1:4383117-4383136 None:intergenic 20.0%
!! AAAGATAAACTAAAAGCAAA+AGG - Chr1:4383356-4383375 MsG0180000319.01.T01:CDS 20.0%
!! AAATATTTCATTTGGGAATT+GGG - Chr1:4384966-4384985 MsG0180000319.01.T01:intron 20.0%
!! ACCAAATTACCAAATTAATA+TGG - Chr1:4387460-4387479 MsG0180000319.01.T01:intron 20.0%
!! AGAAAAAAAACTGAGAAAAT+TGG + Chr1:4389286-4389305 None:intergenic 20.0%
!! ATAAGGTTTAAATTGTTTCA+TGG - Chr1:4385355-4385374 MsG0180000319.01.T01:intron 20.0%
!! ATAAGTTCAACGTAAATAAA+TGG + Chr1:4388776-4388795 None:intergenic 20.0%
!! ATACATATAGTAGTTAACAA+AGG + Chr1:4385113-4385132 None:intergenic 20.0%
!! ATCAATCATTTGAAGAAAAA+AGG + Chr1:4391444-4391463 None:intergenic 20.0%
!! ATTAATTACTACTAAACTTG+CGG + Chr1:4389462-4389481 None:intergenic 20.0%
!! CAAATTTATTTATGGCAAAA+TGG + Chr1:4387696-4387715 None:intergenic 20.0%
!! CATCCAAGTAAAAATAAAAA+TGG + Chr1:4390793-4390812 None:intergenic 20.0%
!! CTATATGTATATGAATATGA+TGG - Chr1:4385123-4385142 MsG0180000319.01.T01:intron 20.0%
!! CTTTCACTAAATGTTAATTT+AGG + Chr1:4386420-4386439 None:intergenic 20.0%
!! GCTGAATTTACAAATTTAAA+TGG + Chr1:4386241-4386260 None:intergenic 20.0%
!! TAAATATTTCATTTGGGAAT+TGG - Chr1:4384965-4384984 MsG0180000319.01.T01:intron 20.0%
!! TAAATTGGAATTTATCATGA+AGG + Chr1:4386333-4386352 None:intergenic 20.0%
!! TAACATGACAACAAATTAAA+AGG + Chr1:4388948-4388967 None:intergenic 20.0%
!! TATAAGCTATATTGTAAAAC+TGG - Chr1:4389793-4389812 MsG0180000319.01.T01:CDS 20.0%
!! TCAATCATTTGAAGAAAAAA+GGG + Chr1:4391443-4391462 None:intergenic 20.0%
!! TGAATCATACTTGAAATTTA+AGG + Chr1:4388040-4388059 None:intergenic 20.0%
!! TTATTGCTAATCATAATTTC+AGG - Chr1:4389494-4389513 MsG0180000319.01.T01:intron 20.0%
!! TTCAATTAGGATATTATCAA+TGG + Chr1:4391520-4391539 None:intergenic 20.0%
!! TTTAAATTTGTAAATTCAGC+AGG - Chr1:4386241-4386260 MsG0180000319.01.T01:CDS 20.0%
!!! AAAATCTTATTGTTGATTTG+TGG + Chr1:4388316-4388335 None:intergenic 20.0%
!!! AAATTTGTTTCTCTTTACAT+TGG - Chr1:4387709-4387728 MsG0180000319.01.T01:CDS 20.0%
!!! AAATTTTACTAATTTCATGC+AGG - Chr1:4385886-4385905 MsG0180000319.01.T01:intron 20.0%
!!! ACCATATTAATTTGGTAATT+TGG + Chr1:4387464-4387483 None:intergenic 20.0%
!!! ATTACAGTTCAAGTTATTAT+CGG + Chr1:4389678-4389697 None:intergenic 20.0%
!!! ATTCATAGTGATTTTATAGT+CGG + Chr1:4388005-4388024 None:intergenic 20.0%
!!! ATTCTAAAATCCTACATTTT+CGG + Chr1:4390145-4390164 None:intergenic 20.0%
!!! CATCTTACTTTTTAAAAGTA+GGG + Chr1:4388511-4388530 None:intergenic 20.0%
!!! CATTTTTATTTTTACTTGGA+TGG - Chr1:4390791-4390810 MsG0180000319.01.T01:intron 20.0%
!!! CTTCAATAAAGTAACAATTT+TGG + Chr1:4385590-4385609 None:intergenic 20.0%
!!! CTTTATGTAAATTTTTCAGA+TGG + Chr1:4385456-4385475 None:intergenic 20.0%
!!! GATTTTATTATTGTCTTTGT+GGG - Chr1:4382233-4382252 MsG0180000319.01.T01:three_prime_UTR 20.0%
!!! GTTTTGTTTTATTTAGATTG+AGG - Chr1:4390180-4390199 MsG0180000319.01.T01:intron 20.0%
!!! TAAGATTGATTTACCTTAAT+TGG - Chr1:4388381-4388400 MsG0180000319.01.T01:CDS 20.0%
!!! TAAGCAAAAATTTGTTCTTT+AGG + Chr1:4383065-4383084 None:intergenic 20.0%
!!! TGACCATTTTTATTTTTACT+TGG - Chr1:4390787-4390806 MsG0180000319.01.T01:intron 20.0%
!!! TGATTTTATTATTGTCTTTG+TGG - Chr1:4382232-4382251 MsG0180000319.01.T01:three_prime_UTR 20.0%
!!! TTATTCAAACCTATGTATTT+TGG - Chr1:4383688-4383707 MsG0180000319.01.T01:intron 20.0%
!!! TTCTTTTTATGACGAAAAAT+GGG - Chr1:4388420-4388439 MsG0180000319.01.T01:CDS 20.0%
!!! TTTAATGGTTTTAAGAAGTT+AGG + Chr1:4386107-4386126 None:intergenic 20.0%
!!! TTTTATGTTACCTATTCTAT+AGG - Chr1:4385003-4385022 MsG0180000319.01.T01:intron 20.0%
!!! TTTTTCTTCAAATGATTGAT+TGG - Chr1:4391444-4391463 MsG0180000319.01.T01:CDS 20.0%
! AAAAATGGAAGAAACTTCAA+AGG - Chr1:4387911-4387930 MsG0180000319.01.T01:intron 25.0%
! AAAAGAACTAATTACTGAGT+TGG - Chr1:4388245-4388264 MsG0180000319.01.T01:intron 25.0%
! AAAATGGAAGAAACTTCAAA+GGG - Chr1:4387912-4387931 MsG0180000319.01.T01:intron 25.0%
! AAATATCTTCGTTACATTTC+AGG + Chr1:4383732-4383751 None:intergenic 25.0%
! AAATCAATTAAAAGCCTGTT+TGG + Chr1:4389935-4389954 None:intergenic 25.0%
! AACTTTACAAAGTATAATGC+TGG - Chr1:4390340-4390359 MsG0180000319.01.T01:intron 25.0%
! AATCTATCTTGTATAGATAC+AGG + Chr1:4383540-4383559 None:intergenic 25.0%
! ACAAATTTAAATGGTAAGGT+AGG + Chr1:4386232-4386251 None:intergenic 25.0%
! ACGAAATTGATATCAATTGT+TGG - Chr1:4391400-4391419 MsG0180000319.01.T01:CDS 25.0%
! ACTTCAAAAAACTTCTAACA+TGG + Chr1:4385853-4385872 None:intergenic 25.0%
! AGATTTATTGAAAATGCAGA+TGG + Chr1:4387001-4387020 None:intergenic 25.0%
! ATCGATAATGCAAGAAAAAA+TGG - Chr1:4387896-4387915 MsG0180000319.01.T01:intron 25.0%
! ATTGTTTGGTATATGAAGAT+TGG - Chr1:4390112-4390131 MsG0180000319.01.T01:intron 25.0%
! CAATATTCACCAAAATAGTT+TGG + Chr1:4387625-4387644 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - Chr1:4383005-4383024 MsG0180000319.01.T01:intron 25.0%
! CTTAGTTCATGATAAGATTA+TGG - Chr1:4385563-4385582 MsG0180000319.01.T01:intron 25.0%
! GAATAATTATTTATGTGCAG+AGG - Chr1:4384006-4384025 MsG0180000319.01.T01:intron 25.0%
! GTAGTATAGATACTTATTTG+TGG - Chr1:4383410-4383429 MsG0180000319.01.T01:CDS 25.0%
! GTTAAGTTATTTGATTGGTA+AGG - Chr1:4383205-4383224 MsG0180000319.01.T01:intron 25.0%
! GTTGAACTTATCATTTACTT+GGG - Chr1:4388785-4388804 MsG0180000319.01.T01:CDS 25.0%
! GTTTAAACCATTCGTAAAAT+TGG - Chr1:4383250-4383269 MsG0180000319.01.T01:intron 25.0%
! TAAATAGGAGAGATTGTTAA+CGG - Chr1:4387946-4387965 MsG0180000319.01.T01:CDS 25.0%
! TATACATCATACCAAAAGTT+TGG + Chr1:4384181-4384200 None:intergenic 25.0%
! TATCCTAATTGAAAACTAGT+TGG - Chr1:4391527-4391546 MsG0180000319.01.T01:five_prime_UTR 25.0%
! TATGAAAATAAGCTGAAAAC+AGG - Chr1:4389822-4389841 MsG0180000319.01.T01:intron 25.0%
! TATTTGATTGTATATCATGG+AGG - Chr1:4385248-4385267 MsG0180000319.01.T01:intron 25.0%
! TCAAATTAATACCAGAATGT+TGG - Chr1:4386609-4386628 MsG0180000319.01.T01:intron 25.0%
! TGGTATGATGTATATATGTT+AGG - Chr1:4384187-4384206 MsG0180000319.01.T01:intron 25.0%
! TTAAAAGTAGGGAACAAAAA+AGG + Chr1:4388500-4388519 None:intergenic 25.0%
! TTATTTCAAAAGGCTAAAGA+TGG - Chr1:4383654-4383673 MsG0180000319.01.T01:intron 25.0%
! TTGACATTGCACAATAATTA+AGG + Chr1:4390954-4390973 None:intergenic 25.0%
! TTTAACGCCTTTCAAAATTT+AGG - Chr1:4385406-4385425 MsG0180000319.01.T01:intron 25.0%
! TTTACCTGAGACATAATTAT+TGG + Chr1:4384287-4384306 None:intergenic 25.0%
!! AAGAATAAAAAGCACATTGT+AGG - Chr1:4390655-4390674 MsG0180000319.01.T01:intron 25.0%
!! AAGGAATTTCTAAGAAGAAA+AGG + Chr1:4386314-4386333 None:intergenic 25.0%
!! ATTTTTCTTATGCAATGTCT+TGG - Chr1:4383557-4383576 MsG0180000319.01.T01:intron 25.0%
!! CAAATTTTATGTTGTTGGAT+AGG - Chr1:4386815-4386834 MsG0180000319.01.T01:intron 25.0%
!! GTTCATTGATAATATATGCA+GGG + Chr1:4382833-4382852 None:intergenic 25.0%
!! GTTCTTTTTATGACGAAAAA+TGG - Chr1:4388419-4388438 MsG0180000319.01.T01:CDS 25.0%
!! TAAGTTACTGTCACATTTTT+CGG - Chr1:4391347-4391366 MsG0180000319.01.T01:CDS 25.0%
!! TCTTTTTATGACGAAAAATG+GGG - Chr1:4388421-4388440 MsG0180000319.01.T01:CDS 25.0%
!! TGAGACAAATTTTATGTTGT+TGG - Chr1:4386810-4386829 MsG0180000319.01.T01:intron 25.0%
!! TGTTCATTGATAATATATGC+AGG + Chr1:4382834-4382853 None:intergenic 25.0%
!! TTCATTGATAATATATGCAG+GGG + Chr1:4382832-4382851 None:intergenic 25.0%
!! TTTACAAAGCCAAACTATTT+TGG - Chr1:4387613-4387632 MsG0180000319.01.T01:CDS 25.0%
!! TTTACTTGAGATAAAAGCAT+TGG + Chr1:4388129-4388148 None:intergenic 25.0%
!! TTTCATCATGTTCACAATTT+TGG + Chr1:4384234-4384253 None:intergenic 25.0%
!!! AAAAATCATAAATGGACTAG+TGG - Chr1:4388697-4388716 MsG0180000319.01.T01:intron 25.0%
!!! ACATCATGTCATTTTGATTT+AGG + Chr1:4390600-4390619 None:intergenic 25.0%
!!! CAAAGAAGAATTTTGATATC+TGG - Chr1:4382312-4382331 MsG0180000319.01.T01:three_prime_UTR 25.0%
!!! CCATCTTACTTTTTAAAAGT+AGG + Chr1:4388512-4388531 None:intergenic 25.0%
!!! CCTACTTTTAAAAAGTAAGA+TGG - Chr1:4388509-4388528 MsG0180000319.01.T01:intron 25.0%
!!! GTTCTACATGTTTTTGTTAA+TGG - Chr1:4386268-4386287 MsG0180000319.01.T01:CDS 25.0%
!!! TGATTTACCTTAATTGGTTT+TGG - Chr1:4388387-4388406 MsG0180000319.01.T01:CDS 25.0%
AAAAGTGAGAAACCAAACTT+GGG + Chr1:4391288-4391307 None:intergenic 30.0%
AAACCATTCGTAAAATTGGA+AGG - Chr1:4383254-4383273 MsG0180000319.01.T01:intron 30.0%
AAAGTAATTACTTACGAGAC+CGG + Chr1:4389419-4389438 None:intergenic 30.0%
AAATCTTACCATTTCTGTGT+TGG + Chr1:4387235-4387254 None:intergenic 30.0%
AACTAATGTTGTACACATGT+TGG + Chr1:4382396-4382415 None:intergenic 30.0%
AATCAGTGTACCTATAGAAT+AGG + Chr1:4385016-4385035 None:intergenic 30.0%
AATTGAAACTCCAACCTTAA+TGG + Chr1:4384087-4384106 None:intergenic 30.0%
ACTAATTTCATGCAGGTTAA+TGG - Chr1:4385893-4385912 MsG0180000319.01.T01:intron 30.0%
AGAAATGAAGAAAGAACGAA+GGG + Chr1:4389150-4389169 None:intergenic 30.0%
AGAACTTTAAACCCAAAATG+TGG - Chr1:4384881-4384900 MsG0180000319.01.T01:intron 30.0%
AGTTATTTGATTGGTAAGGA+AGG - Chr1:4383209-4383228 MsG0180000319.01.T01:intron 30.0%
ATCTTGTATAGATACAGGTA+TGG + Chr1:4383535-4383554 None:intergenic 30.0%
ATGTCCATTCCAAAATACAT+AGG + Chr1:4383700-4383719 None:intergenic 30.0%
ATTGGTAAGGAAGGATAATA+TGG - Chr1:4383218-4383237 MsG0180000319.01.T01:intron 30.0%
CATAGGTTTGAATAACATCA+AGG + Chr1:4383683-4383702 None:intergenic 30.0%
CATTGGAGAAGTAAAGAAAA+AGG + Chr1:4388112-4388131 None:intergenic 30.0%
CGTTGAACTTATCATTTACT+TGG - Chr1:4388784-4388803 MsG0180000319.01.T01:CDS 30.0%
CTACATTATTGAAGAGTAGA+GGG - Chr1:4389526-4389545 MsG0180000319.01.T01:intron 30.0%
GAGAAAGGAAAGCAATAATT+TGG + Chr1:4382435-4382454 None:intergenic 30.0%
GATGAATATGGTATGCAATA+AGG - Chr1:4385338-4385357 MsG0180000319.01.T01:intron 30.0%
GATTCAACAATGAATCATCA+AGG - Chr1:4388054-4388073 MsG0180000319.01.T01:intron 30.0%
GGACTAATGTTTACTGAAAA+TGG + Chr1:4386177-4386196 None:intergenic 30.0%
GGTACAAATTTGAAGGATAA+AGG - Chr1:4384737-4384756 MsG0180000319.01.T01:intron 30.0%
GTGAAATCCAAAACCAATTA+AGG + Chr1:4388397-4388416 None:intergenic 30.0%
GTTAAAAAACAACCTTGACA+TGG - Chr1:4386918-4386937 MsG0180000319.01.T01:intron 30.0%
GTTACAAGCTCTATAATTCA+TGG + Chr1:4387650-4387669 None:intergenic 30.0%
GTTCAACGTAAATAAATGGA+TGG + Chr1:4388772-4388791 None:intergenic 30.0%
TAAATCATACACAGTGACAA+TGG + Chr1:4391493-4391512 None:intergenic 30.0%
TACTAAACTTGCGGTAAAAA+AGG + Chr1:4389453-4389472 None:intergenic 30.0%
TATGTTTCTTAATGCAGATG+TGG - Chr1:4383625-4383644 MsG0180000319.01.T01:CDS 30.0%
TCAAGTTTACACCAAAAGAT+TGG - Chr1:4387558-4387577 MsG0180000319.01.T01:intron 30.0%
TCCAGATTCATATTGTGAAT+CGG - Chr1:4390432-4390451 MsG0180000319.01.T01:intron 30.0%
TCGAACAAGATAATACTAAC+CGG + Chr1:4386501-4386520 None:intergenic 30.0%
TCTACATTATTGAAGAGTAG+AGG - Chr1:4389525-4389544 MsG0180000319.01.T01:intron 30.0%
TCTTCAAATGATTGATTGGT+TGG - Chr1:4391448-4391467 MsG0180000319.01.T01:CDS 30.0%
TCTTGTATAGATACAGGTAT+GGG + Chr1:4383534-4383553 None:intergenic 30.0%
TGCATACCATATTCATCAAT+AGG + Chr1:4385335-4385354 None:intergenic 30.0%
TGGTAAGATTTCATATAACG+AGG - Chr1:4387244-4387263 MsG0180000319.01.T01:CDS 30.0%
TGGTATATGAAGATTGGATT+TGG - Chr1:4390118-4390137 MsG0180000319.01.T01:intron 30.0%
TGTCAATCTACAACATAGTT+CGG + Chr1:4384822-4384841 None:intergenic 30.0%
TTTGTGCTGAATGGAATTAT+GGG - Chr1:4383914-4383933 MsG0180000319.01.T01:intron 30.0%
TTTGTTAATGGTCAACTTTC+AGG - Chr1:4386280-4386299 MsG0180000319.01.T01:CDS 30.0%
! AATAAAAAGCACATTGTAGG+AGG - Chr1:4390658-4390677 MsG0180000319.01.T01:intron 30.0%
! AGTACTTTTGTAAGTAACTG+AGG - Chr1:4390396-4390415 MsG0180000319.01.T01:intron 30.0%
! ATACCTTCAATCAAAAGTGT+CGG - Chr1:4389723-4389742 MsG0180000319.01.T01:intron 30.0%
! ATTACTGACTAATAGATGTC+TGG - Chr1:4382793-4382812 MsG0180000319.01.T01:intron 30.0%
! CAAAACTGTAGTTTTCAACA+CGG - Chr1:4385779-4385798 MsG0180000319.01.T01:intron 30.0%
! CTTTTACTAATCCAAAATGC+AGG - Chr1:4387194-4387213 MsG0180000319.01.T01:CDS 30.0%
! TATCATGGAGGAACTAATTT+TGG - Chr1:4385260-4385279 MsG0180000319.01.T01:intron 30.0%
! TATTTTTCTCAACCCAACAA+TGG + Chr1:4382132-4382151 None:intergenic 30.0%
! TCTTGTGTACATAGTTTTCT+CGG - Chr1:4383587-4383606 MsG0180000319.01.T01:CDS 30.0%
! TGGAAGTCCTAAATTTTGAA+AGG + Chr1:4385416-4385435 None:intergenic 30.0%
! TTACTGACTAATAGATGTCT+GGG - Chr1:4382794-4382813 MsG0180000319.01.T01:intron 30.0%
! TTTATAGTCGGATTTTGTCT+CGG + Chr1:4387993-4388012 None:intergenic 30.0%
! TTTCCTTCCAATTTTACGAA+TGG + Chr1:4383260-4383279 None:intergenic 30.0%
! TTTTATGTTGTTGGATAGGT+TGG - Chr1:4386819-4386838 MsG0180000319.01.T01:intron 30.0%
!! ACTTTGAAACATGGAATGTT+GGG - Chr1:4386637-4386656 MsG0180000319.01.T01:intron 30.0%
!! ATTGATTTTTCTGCGACAAT+TGG - Chr1:4390265-4390284 MsG0180000319.01.T01:intron 30.0%
!! CAAACCTATGTATTTTGGAA+TGG - Chr1:4383693-4383712 MsG0180000319.01.T01:intron 30.0%
!! CTATTCAAGAGTTTTGATGA+TGG - Chr1:4382170-4382189 MsG0180000319.01.T01:three_prime_UTR 30.0%
!! GATATCAATTGTTGGTTTCA+TGG - Chr1:4391408-4391427 MsG0180000319.01.T01:CDS 30.0%
!! TAGTGAAAGTGTTAACCTAA+AGG - Chr1:4386431-4386450 MsG0180000319.01.T01:intron 30.0%
!! TCTCTTTGCTTGTTTTCTTT+GGG + Chr1:4388452-4388471 None:intergenic 30.0%
!! TGTTTGTTGTTACTTAATCG+TGG - Chr1:4382508-4382527 MsG0180000319.01.T01:CDS 30.0%
!! TTCTATAGGTACACTGATTT+CGG - Chr1:4385017-4385036 MsG0180000319.01.T01:intron 30.0%
!!! ACATAATTTTGGTTCATGCA+TGG + Chr1:4382485-4382504 None:intergenic 30.0%
!!! TCTGGATTTTTTGCCAATAT+CGG + Chr1:4389222-4389241 None:intergenic 30.0%
!!! TTAGCCTTTTGAAATAAGTC+TGG + Chr1:4383651-4383670 None:intergenic 30.0%
AAAAAGAGTTTCACATGCTG+GGG - Chr1:4382208-4382227 MsG0180000319.01.T01:three_prime_UTR 35.0%
AAACTACGACACAAAATCTG+CGG - Chr1:4385691-4385710 MsG0180000319.01.T01:intron 35.0%
AACAAAAGACACACCATTGT+TGG - Chr1:4382116-4382135 MsG0180000319.01.T01:three_prime_UTR 35.0%
AACTTCCAGTTATGGTATGA+AGG + Chr1:4386866-4386885 None:intergenic 35.0%
AAGTAAGATGGTTGCTCAAT+AGG - Chr1:4388521-4388540 MsG0180000319.01.T01:intron 35.0%
AAGTCATAGACTTTACCTCA+AGG + Chr1:4385546-4385565 None:intergenic 35.0%
AATGATAGGGTGTATACCAA+CGG - Chr1:4383088-4383107 MsG0180000319.01.T01:intron 35.0%
AATGTTGTACACATGTTGGA+TGG + Chr1:4382392-4382411 None:intergenic 35.0%
ACAAAAGACACACCATTGTT+GGG - Chr1:4382117-4382136 MsG0180000319.01.T01:three_prime_UTR 35.0%
ACCCACAAAATGGTGAAAAA+AGG + Chr1:4382537-4382556 None:intergenic 35.0%
AGCATCATAATCATAGCTTG+TGG + Chr1:4385312-4385331 None:intergenic 35.0%
ATGAATGTAGGAACTGTGTA+TGG - Chr1:4386381-4386400 MsG0180000319.01.T01:intron 35.0%
ATGGACATAGCTTCCATAAA+AGG - Chr1:4385912-4385931 MsG0180000319.01.T01:intron 35.0%
CAAAAAGAGTTTCACATGCT+GGG - Chr1:4382207-4382226 MsG0180000319.01.T01:three_prime_UTR 35.0%
CAAAAGTGAGAAACCAAACT+TGG + Chr1:4391289-4391308 None:intergenic 35.0%
CAACGTAAATAAATGGATGG+TGG + Chr1:4388769-4388788 None:intergenic 35.0%
CAATATCTTCATGATCATGC+TGG - Chr1:4390205-4390224 MsG0180000319.01.T01:intron 35.0%
CAATCAAATGTAGTATCCAC+GGG + Chr1:4385944-4385963 None:intergenic 35.0%
CAGAAATGAAGAAAGAACGA+AGG + Chr1:4389151-4389170 None:intergenic 35.0%
CAGATGGTCATATGTAACAT+TGG + Chr1:4386985-4387004 None:intergenic 35.0%
CATGTAAAGTTGCTTGCAAA+TGG - Chr1:4387735-4387754 MsG0180000319.01.T01:CDS 35.0%
CCAATCAAATGTAGTATCCA+CGG + Chr1:4385945-4385964 None:intergenic 35.0%
CCACAAAATGGTGAAAAAAG+GGG + Chr1:4382535-4382554 None:intergenic 35.0%
CCCACAAAATGGTGAAAAAA+GGG + Chr1:4382536-4382555 None:intergenic 35.0%
CTGCTAAGGTAAACTTACAA+CGG + Chr1:4384604-4384623 None:intergenic 35.0%
CTTGAACTACCAGAAAAAGA+TGG + Chr1:4387543-4387562 None:intergenic 35.0%
CTTTATGTTCACTTGCGTAT+TGG - Chr1:4383883-4383902 MsG0180000319.01.T01:intron 35.0%
GAAACAACAATGTCTTCCAA+AGG - Chr1:4389182-4389201 MsG0180000319.01.T01:CDS 35.0%
GACTTCCAAATGAACCAAAA+TGG - Chr1:4385428-4385447 MsG0180000319.01.T01:intron 35.0%
GATATTGGCAAAAAATCCAG+AGG - Chr1:4389221-4389240 MsG0180000319.01.T01:intron 35.0%
GATGCTCCTATTGATGAATA+TGG - Chr1:4385326-4385345 MsG0180000319.01.T01:intron 35.0%
GCAACGCTTCTTATTGTAAT+TGG + Chr1:4384359-4384378 None:intergenic 35.0%
GCTCTCTCTATCTTCTATTT+CGG - Chr1:4389631-4389650 MsG0180000319.01.T01:intron 35.0%
GCTTGGAAATAAAAACCTTG+AGG - Chr1:4385528-4385547 MsG0180000319.01.T01:intron 35.0%
GTAATCCATGTATGTTCTTC+AGG - Chr1:4389994-4390013 MsG0180000319.01.T01:CDS 35.0%
GTCATATGTAACATTGGCAA+AGG + Chr1:4386979-4386998 None:intergenic 35.0%
GTGACCTAGAAAAGTTGAAT+GGG - Chr1:4391052-4391071 MsG0180000319.01.T01:intron 35.0%
GTGCTTTCTGAATACGAAAA+GGG - Chr1:4389114-4389133 MsG0180000319.01.T01:CDS 35.0%
GTTTGTGCTGAATGGAATTA+TGG - Chr1:4383913-4383932 MsG0180000319.01.T01:intron 35.0%
TACAAATGAGAACACGTTGA+CGG - Chr1:4391110-4391129 MsG0180000319.01.T01:intron 35.0%
TCAAATAAGCTGATCCAAAC+AGG - Chr1:4389918-4389937 MsG0180000319.01.T01:intron 35.0%
TCACCAATGAAATTCCAGTA+GGG + Chr1:4387410-4387429 None:intergenic 35.0%
TCCGATTCACAATATGAATC+TGG + Chr1:4390436-4390455 None:intergenic 35.0%
TCTCATGATTGTTACTCCTA+CGG - Chr1:4388157-4388176 MsG0180000319.01.T01:CDS 35.0%
TCTTTGTCCATCAATCACAA+GGG + Chr1:4382298-4382317 None:intergenic 35.0%
TGACCTAGAAAAGTTGAATG+GGG - Chr1:4391053-4391072 MsG0180000319.01.T01:intron 35.0%
TGATAGATCGAGAATGAGTA+TGG - Chr1:4384456-4384475 MsG0180000319.01.T01:intron 35.0%
TGCAACATCATCTTACACAT+AGG - Chr1:4391211-4391230 MsG0180000319.01.T01:intron 35.0%
TGCTAAGGTAAACTTACAAC+GGG + Chr1:4384603-4384622 None:intergenic 35.0%
TGCTAGATTCATACAAATCG+TGG - Chr1:4385085-4385104 MsG0180000319.01.T01:intron 35.0%
TGGAAAGGCTTACACAAAAT+GGG - Chr1:4384506-4384525 MsG0180000319.01.T01:intron 35.0%
TGGATAGGTATCATATTCCT+CGG - Chr1:4387328-4387347 MsG0180000319.01.T01:intron 35.0%
TGGTCCAATAATTATGTCTC+AGG - Chr1:4384280-4384299 MsG0180000319.01.T01:CDS 35.0%
TGTGATGAATGTAATTACGC+TGG - Chr1:4387169-4387188 MsG0180000319.01.T01:CDS 35.0%
TGTGCTTTCTGAATACGAAA+AGG - Chr1:4389113-4389132 MsG0180000319.01.T01:CDS 35.0%
TGTGTTTAGTGTTAGAGAAG+AGG - Chr1:4384716-4384735 MsG0180000319.01.T01:intron 35.0%
TTACCATGTGCTATATATGC+AGG + Chr1:4387148-4387167 None:intergenic 35.0%
TTATCTTTCCGATTCCGATT+TGG - Chr1:4389308-4389327 MsG0180000319.01.T01:intron 35.0%
TTATTGTCTTTGTGGGTTTG+TGG - Chr1:4382240-4382259 MsG0180000319.01.T01:three_prime_UTR 35.0%
TTCACCAATGAAATTCCAGT+AGG + Chr1:4387411-4387430 None:intergenic 35.0%
TTCGATAAGTCTTCCAAAGT+CGG + Chr1:4390874-4390893 None:intergenic 35.0%
TTCTTTGTCCATCAATCACA+AGG + Chr1:4382299-4382318 None:intergenic 35.0%
TTGGAAAATAGTCCCAAGTT+TGG - Chr1:4391273-4391292 MsG0180000319.01.T01:intron 35.0%
TTGTAGATTGACACTTGCAA+TGG - Chr1:4384829-4384848 MsG0180000319.01.T01:intron 35.0%
TTTCAAAAGGCTAAAGATGG+AGG - Chr1:4383657-4383676 MsG0180000319.01.T01:intron 35.0%
! AGAGAGTTTGTTTCAAACTC+AGG - Chr1:4384256-4384275 MsG0180000319.01.T01:CDS 35.0%
! AGTTCAAGTTATTATCGGTG+TGG + Chr1:4389673-4389692 None:intergenic 35.0%
! CAATTCTCAGTCCACATTTT+GGG + Chr1:4384895-4384914 None:intergenic 35.0%
! CATAGCTTGTGGCAATAAAA+AGG + Chr1:4385301-4385320 None:intergenic 35.0%
! CATTTCTGCATCCAATCTTT+TGG + Chr1:4387572-4387591 None:intergenic 35.0%
! CCTTAGAGGGGTTTAAAATA+CGG - Chr1:4391315-4391334 MsG0180000319.01.T01:CDS 35.0%
! CGAATAACTGTTACTTGTGT+CGG - Chr1:4390890-4390909 MsG0180000319.01.T01:intron 35.0%
! GAGAAGAGGTACAAATTTGA+AGG - Chr1:4384730-4384749 MsG0180000319.01.T01:intron 35.0%
! GAGAGTTTGTTTCAAACTCA+GGG - Chr1:4384257-4384276 MsG0180000319.01.T01:CDS 35.0%
! TACTGACTAATAGATGTCTG+GGG - Chr1:4382795-4382814 MsG0180000319.01.T01:intron 35.0%
! TCCTACGGCTTTATACTTAT+TGG - Chr1:4388172-4388191 MsG0180000319.01.T01:CDS 35.0%
! TCTTTACTTAGTGTTGCTGT+GGG - Chr1:4386471-4386490 MsG0180000319.01.T01:intron 35.0%
! TTCTTTACTTAGTGTTGCTG+TGG - Chr1:4386470-4386489 MsG0180000319.01.T01:intron 35.0%
! TTGATAATATATGCAGGGGT+CGG + Chr1:4382828-4382847 None:intergenic 35.0%
! TTGGGTTTAAAGTTCTCGTT+GGG + Chr1:4384877-4384896 None:intergenic 35.0%
! TTTGGGTTTAAAGTTCTCGT+TGG + Chr1:4384878-4384897 None:intergenic 35.0%
! TTTTCACCATTTTGTGGGTT+TGG - Chr1:4382538-4382557 MsG0180000319.01.T01:CDS 35.0%
! TTTTGTGAGAATATCTGCGA+CGG + Chr1:4389350-4389369 None:intergenic 35.0%
!! AATTTTGGTCGAACATCTAG+TGG - Chr1:4385275-4385294 MsG0180000319.01.T01:intron 35.0%
!! AGACATTGTTGTTTCTTCGT+TGG + Chr1:4389177-4389196 None:intergenic 35.0%
!! ATTTTGTGTCGTAGTTTGCA+AGG + Chr1:4385688-4385707 None:intergenic 35.0%
!! CACTTTGAAACATGGAATGT+TGG - Chr1:4386636-4386655 MsG0180000319.01.T01:intron 35.0%
!! CTCTCTTTGCTTGTTTTCTT+TGG + Chr1:4388453-4388472 None:intergenic 35.0%
!! CTCTTTGCTTGTTTTCTTTG+GGG + Chr1:4388451-4388470 None:intergenic 35.0%
!! CTTTGAAACATGGAATGTTG+GGG - Chr1:4386638-4386657 MsG0180000319.01.T01:intron 35.0%
!! GAAAGTGTTAACCTAAAGGT+CGG - Chr1:4386435-4386454 MsG0180000319.01.T01:intron 35.0%
!! GAACTTAGAAGTATTCACAC+AGG + Chr1:4385169-4385188 None:intergenic 35.0%
!! GGATGGTGGATAAAAAATTG+TGG + Chr1:4388755-4388774 None:intergenic 35.0%
!! TAACCGACACTTTTGATTGA+AGG + Chr1:4389729-4389748 None:intergenic 35.0%
!! TCTTTGCTTGTTTTCTTTGG+GGG + Chr1:4388450-4388469 None:intergenic 35.0%
!! TTACAAAAGTACTGAAGCAC+TGG + Chr1:4390389-4390408 None:intergenic 35.0%
!! TTTTTCAGATGGCTCCATTT+TGG + Chr1:4385445-4385464 None:intergenic 35.0%
!!! CATTTTTTCAGAGCTGACAA+GGG - Chr1:4391003-4391022 MsG0180000319.01.T01:intron 35.0%
!!! CCCTTTTTTCACCATTTTGT+GGG - Chr1:4382533-4382552 MsG0180000319.01.T01:CDS 35.0%
!!! TCATTTTTTCAGAGCTGACA+AGG - Chr1:4391002-4391021 MsG0180000319.01.T01:intron 35.0%
!!! TTTTAAGTCATTGCCGACTT+TGG - Chr1:4390858-4390877 MsG0180000319.01.T01:intron 35.0%
AACAACCTTGACATGGTACA+AGG - Chr1:4386925-4386944 MsG0180000319.01.T01:intron 40.0%
AACAATCCCTAATACCTTGC+CGG + Chr1:4390098-4390117 None:intergenic 40.0%
AACACTGCACAATACACTGT+AGG - Chr1:4390628-4390647 MsG0180000319.01.T01:intron 40.0%
AACATTGAAGGGTCTAGATG+AGG - Chr1:4386674-4386693 MsG0180000319.01.T01:intron 40.0%
AACTTCAAAGGGAGAAAGAG+AGG - Chr1:4387923-4387942 MsG0180000319.01.T01:intron 40.0%
AAGGTATGTACAACACGTCA+CGG + Chr1:4389710-4389729 None:intergenic 40.0%
AATGGAGGAACTTCCAGTTA+TGG + Chr1:4386874-4386893 None:intergenic 40.0%
AATGTAGGAACTGTGTATGG+AGG - Chr1:4386384-4386403 MsG0180000319.01.T01:intron 40.0%
ACATTGAAGGGTCTAGATGA+GGG - Chr1:4386675-4386694 MsG0180000319.01.T01:intron 40.0%
AGACAATGAGCCATTAAGGT+TGG - Chr1:4384074-4384093 MsG0180000319.01.T01:CDS 40.0%
AGATATGAGTAGCATGGGAA+AGG - Chr1:4387082-4387101 MsG0180000319.01.T01:intron 40.0%
AGGGAGAAAGAGAGGTAAAT+AGG - Chr1:4387931-4387950 MsG0180000319.01.T01:intron 40.0%
AGGTCATTCTTGACAATCTC+TGG - Chr1:4391231-4391250 MsG0180000319.01.T01:intron 40.0%
ATGAGTTTCGTATCACTGCA+TGG + Chr1:4389884-4389903 None:intergenic 40.0%
ATGATAGGGTGTATACCAAC+GGG - Chr1:4383089-4383108 MsG0180000319.01.T01:intron 40.0%
ATTCCATTCAGCACAAACGT+AGG + Chr1:4383911-4383930 None:intergenic 40.0%
CAACACCTGAAGAACATACA+TGG + Chr1:4390002-4390021 None:intergenic 40.0%
CCAAAATGCAGGACAAATTG+TGG - Chr1:4387205-4387224 MsG0180000319.01.T01:CDS 40.0%
CCATCATAGCAATGCACTTT+GGG - Chr1:4386008-4386027 MsG0180000319.01.T01:intron 40.0%
CCGTGGATACTACATTTGAT+TGG - Chr1:4385942-4385961 MsG0180000319.01.T01:intron 40.0%
CGATTACCTGACTACAAATC+CGG - Chr1:4390076-4390095 MsG0180000319.01.T01:intron 40.0%
CGTGACCTAGAAAAGTTGAA+TGG - Chr1:4391051-4391070 MsG0180000319.01.T01:intron 40.0%
CTAGACCCTTCAATGTTACT+GGG + Chr1:4386671-4386690 None:intergenic 40.0%
CTCAATAGGTCTATCAGAGT+TGG - Chr1:4388535-4388554 MsG0180000319.01.T01:intron 40.0%
CTGGAAAGGCTTACACAAAA+TGG - Chr1:4384505-4384524 MsG0180000319.01.T01:intron 40.0%
CTTCGTTACATTTCAGGAGA+AGG + Chr1:4383726-4383745 None:intergenic 40.0%
CTTGGTTGTGCTTGAAGAAT+GGG - Chr1:4387377-4387396 MsG0180000319.01.T01:CDS 40.0%
GAACAGACAATGAGCCATTA+AGG - Chr1:4384070-4384089 MsG0180000319.01.T01:CDS 40.0%
GAATCATCAAGGTTCTCTCT+TGG - Chr1:4388065-4388084 MsG0180000319.01.T01:intron 40.0%
GACCTAGAAAAGTTGAATGG+GGG - Chr1:4391054-4391073 MsG0180000319.01.T01:intron 40.0%
GCAAAAAGAGTTTCACATGC+TGG - Chr1:4382206-4382225 MsG0180000319.01.T01:three_prime_UTR 40.0%
GCAACGGTTACATTTGGAAA+TGG - Chr1:4385713-4385732 MsG0180000319.01.T01:intron 40.0%
GCACTAGATATGAGTAGCAT+GGG - Chr1:4387077-4387096 MsG0180000319.01.T01:intron 40.0%
GCCAATAAGTATAAAGCCGT+AGG + Chr1:4388176-4388195 None:intergenic 40.0%
GCGATTCTTCAGATTATCTG+TGG - Chr1:4386049-4386068 MsG0180000319.01.T01:intron 40.0%
GTCGCAGAAAAATCAATAGC+AGG + Chr1:4390262-4390281 None:intergenic 40.0%
GTGGCCAGACTTATTTCAAA+AGG - Chr1:4383644-4383663 MsG0180000319.01.T01:intron 40.0%
TCATAGACCAACTGAAGACT+TGG - Chr1:4385052-4385071 MsG0180000319.01.T01:intron 40.0%
TCCATCATAGCAATGCACTT+TGG - Chr1:4386007-4386026 MsG0180000319.01.T01:intron 40.0%
TCGAGATCGGAAAACCAAAT+CGG + Chr1:4389325-4389344 None:intergenic 40.0%
TCGGAAAACCAAATCGGAAT+CGG + Chr1:4389319-4389338 None:intergenic 40.0%
TCTAGACCCTTCAATGTTAC+TGG + Chr1:4386672-4386691 None:intergenic 40.0%
TCTAGATACTGGTGTACCTT+GGG - Chr1:4384548-4384567 MsG0180000319.01.T01:intron 40.0%
TCTTACCTTGTACCATGTCA+AGG + Chr1:4386933-4386952 None:intergenic 40.0%
TCTTGGTTGTGCTTGAAGAA+TGG - Chr1:4387376-4387395 MsG0180000319.01.T01:CDS 40.0%
TGACCCTACTGGAATTTCAT+TGG - Chr1:4387404-4387423 MsG0180000319.01.T01:CDS 40.0%
TGATAATATATGCAGGGGTC+GGG + Chr1:4382827-4382846 None:intergenic 40.0%
TGATCCTCAAACAACTGTGA+AGG - Chr1:4391152-4391171 MsG0180000319.01.T01:intron 40.0%
TGATCCTTGTGTCCAATCAA+TGG + Chr1:4386892-4386911 None:intergenic 40.0%
TGGAACATACTTGAGCCAAA+CGG + Chr1:4384037-4384056 None:intergenic 40.0%
TGGATTTGGACCGAAAATGT+AGG - Chr1:4390132-4390151 MsG0180000319.01.T01:intron 40.0%
TGTAAAGTTGCCAACATGTG+TGG + Chr1:4390329-4390348 None:intergenic 40.0%
TTAGGCCCAGTAACATTGAA+GGG - Chr1:4386663-4386682 MsG0180000319.01.T01:intron 40.0%
TTCCATTCAGCACAAACGTA+GGG + Chr1:4383910-4383929 None:intergenic 40.0%
TTGAGCCTTCATACCATAAC+TGG - Chr1:4386858-4386877 MsG0180000319.01.T01:intron 40.0%
TTGCACAATAATTAAGGCCC+CGG + Chr1:4390948-4390967 None:intergenic 40.0%
TTGGACACAAGGATCATCAT+TGG - Chr1:4386896-4386915 MsG0180000319.01.T01:intron 40.0%
TTGGTTGTGCTTGAAGAATG+GGG - Chr1:4387378-4387397 MsG0180000319.01.T01:CDS 40.0%
TTGTGGGAGAAATTAGCAGA+AGG - Chr1:4391082-4391101 MsG0180000319.01.T01:intron 40.0%
TTTGCCTTCACAGTTGTTTG+AGG + Chr1:4391159-4391178 None:intergenic 40.0%
! ACAAATCCGGCAAGGTATTA+GGG - Chr1:4390089-4390108 MsG0180000319.01.T01:intron 40.0%
! ACTTTTGCTCAAGCCTTAGA+GGG - Chr1:4391302-4391321 MsG0180000319.01.T01:CDS 40.0%
! AGTTTGTTTCAAACTCAGGG+TGG - Chr1:4384260-4384279 MsG0180000319.01.T01:CDS 40.0%
! ATCGATGCTCCATCTTTTTC+TGG - Chr1:4387531-4387550 MsG0180000319.01.T01:intron 40.0%
! CATTTTGTGTAAGCCTTTCC+AGG + Chr1:4384507-4384526 None:intergenic 40.0%
! CCAAAATGTGGACTGAGAAT+TGG - Chr1:4384893-4384912 MsG0180000319.01.T01:intron 40.0%
! CCAATTCTCAGTCCACATTT+TGG + Chr1:4384896-4384915 None:intergenic 40.0%
! CCACAATTTGTCCTGCATTT+TGG + Chr1:4387208-4387227 None:intergenic 40.0%
! GCAAGGTATTAGGGATTGTT+TGG - Chr1:4390098-4390117 MsG0180000319.01.T01:intron 40.0%
! GGAGATGGTGAGTTTTTGAT+CGG + Chr1:4389383-4389402 None:intergenic 40.0%
! GTTGGATAGGTTGGACTAAA+GGG - Chr1:4386828-4386847 MsG0180000319.01.T01:intron 40.0%
! TACAAATCCGGCAAGGTATT+AGG - Chr1:4390088-4390107 MsG0180000319.01.T01:intron 40.0%
! TGTAGTTTTCAACACGGCAA+CGG - Chr1:4385785-4385804 MsG0180000319.01.T01:intron 40.0%
! TGTTGGATAGGTTGGACTAA+AGG - Chr1:4386827-4386846 MsG0180000319.01.T01:intron 40.0%
! TTCCAATGCCTTTGTTTCGA+AGG + Chr1:4391259-4391278 None:intergenic 40.0%
! TTGGCAGAAATGGTCTTACA+AGG - Chr1:4386713-4386732 MsG0180000319.01.T01:intron 40.0%
! TTTGGCTCAAGTATGTTCCA+GGG - Chr1:4384037-4384056 MsG0180000319.01.T01:intron 40.0%
! TTTTGCCAATATCGGAGAAG+AGG + Chr1:4389214-4389233 None:intergenic 40.0%
!! CCGTATTTTAAACCCCTCTA+AGG + Chr1:4391318-4391337 None:intergenic 40.0%
!! GTTGATTTGTGGTACTCTCT+TGG + Chr1:4388305-4388324 None:intergenic 40.0%
!! TATAGGTACACTGATTTCGG+TGG - Chr1:4385020-4385039 MsG0180000319.01.T01:intron 40.0%
!! TCTTGTTATTGCCGACCTTT+AGG + Chr1:4386449-4386468 None:intergenic 40.0%
!! TTGGTCTGCACTTTGAAACA+TGG - Chr1:4386628-4386647 MsG0180000319.01.T01:intron 40.0%
!!! CCCCTTTTTTCACCATTTTG+TGG - Chr1:4382532-4382551 MsG0180000319.01.T01:CDS 40.0%
!!! TGGCTCCATTTTGGTTCATT+TGG + Chr1:4385436-4385455 None:intergenic 40.0%
AAAGAAGATGCTGACAGACC+AGG + Chr1:4385755-4385774 None:intergenic 45.0%
AAGACCTCCCGCTTACTAAA+CGG + Chr1:4389040-4389059 None:intergenic 45.0%
AAGAGAGTGAGTGTTACCTC+TGG + Chr1:4389240-4389259 None:intergenic 45.0%
AAGGCAAAGCTGAACAACCA+TGG - Chr1:4391171-4391190 MsG0180000319.01.T01:intron 45.0%
AATGAGAACACGTTGACGGT+TGG - Chr1:4391114-4391133 MsG0180000319.01.T01:intron 45.0%
ACAATGTCTTCCAAAGGACC+TGG - Chr1:4389188-4389207 MsG0180000319.01.T01:intron 45.0%
ACGCAAGTACGATACCTTCA+TGG + Chr1:4391034-4391053 None:intergenic 45.0%
AGGAACTGTGTATGGAGGAT+TGG - Chr1:4386389-4386408 MsG0180000319.01.T01:intron 45.0%
ATACAGCCTCAAGATTGCCA+TGG + Chr1:4391191-4391210 None:intergenic 45.0%
ATGAGTATGGACCTGTGGAA+TGG - Chr1:4384469-4384488 MsG0180000319.01.T01:intron 45.0%
ATGGCTGTAGGTCTAGATAC+TGG - Chr1:4384537-4384556 MsG0180000319.01.T01:intron 45.0%
ATGGTTGTAGCCATCCTCAA+AGG + Chr1:4388211-4388230 None:intergenic 45.0%
ATTACTTACGAGACCGGAGT+TGG + Chr1:4389413-4389432 None:intergenic 45.0%
CAAAGTGCAGACCAACATTC+TGG + Chr1:4386623-4386642 None:intergenic 45.0%
CACAAAGCCCTTGTGATTGA+TGG - Chr1:4382288-4382307 MsG0180000319.01.T01:three_prime_UTR 45.0%
CATTGAAGGGTCTAGATGAG+GGG - Chr1:4386676-4386695 MsG0180000319.01.T01:intron 45.0%
CCCAAAGTGCATTGCTATGA+TGG + Chr1:4386011-4386030 None:intergenic 45.0%
CTACTCATATCTAGTGCCAC+TGG + Chr1:4387074-4387093 None:intergenic 45.0%
CTGCACAATACACTGTAGGA+AGG - Chr1:4390632-4390651 MsG0180000319.01.T01:intron 45.0%
CTGGAAGTTCCTCCATTGAT+TGG - Chr1:4386877-4386896 MsG0180000319.01.T01:intron 45.0%
GAACAACCATGGCAATCTTG+AGG - Chr1:4391182-4391201 MsG0180000319.01.T01:intron 45.0%
GAAGCAAGAACTTTCGCAGA+AGG + Chr1:4390052-4390071 None:intergenic 45.0%
GACGGTTGGATGTTCTTATG+TGG - Chr1:4391128-4391147 MsG0180000319.01.T01:intron 45.0%
GAGACTTGTCTTGGCAGAAA+TGG - Chr1:4386703-4386722 MsG0180000319.01.T01:intron 45.0%
GAGTATGCCAAGTCTTCAGT+TGG + Chr1:4385062-4385081 None:intergenic 45.0%
GGAACATACTTGAGCCAAAC+GGG + Chr1:4384036-4384055 None:intergenic 45.0%
GGATCCACAGAAATCAAAGC+TGG + Chr1:4385496-4385515 None:intergenic 45.0%
GGATGACCAAACCCACAAAA+TGG + Chr1:4382547-4382566 None:intergenic 45.0%
GGCAAATATGATCTACCACC+TGG - Chr1:4385734-4385753 MsG0180000319.01.T01:intron 45.0%
GGCACTAGATATGAGTAGCA+TGG - Chr1:4387076-4387095 MsG0180000319.01.T01:intron 45.0%
GGTAAACTTACAACGGGATC+AGG + Chr1:4384597-4384616 None:intergenic 45.0%
GGTATCATATTCCTCGGTCA+TGG - Chr1:4387334-4387353 MsG0180000319.01.T01:intron 45.0%
GTCTAGATACTGGTGTACCT+TGG - Chr1:4384547-4384566 MsG0180000319.01.T01:intron 45.0%
GTGGAGAACCAACACAGAAA+TGG - Chr1:4387224-4387243 MsG0180000319.01.T01:CDS 45.0%
GTTAGGCCCAGTAACATTGA+AGG - Chr1:4386662-4386681 MsG0180000319.01.T01:intron 45.0%
GTTGTACACATGTTGGATGG+AGG + Chr1:4382389-4382408 None:intergenic 45.0%
TACACATGTTGGATGGAGGT+TGG + Chr1:4382385-4382404 None:intergenic 45.0%
TCCTTGTGTCCAATCAATGG+AGG + Chr1:4386889-4386908 None:intergenic 45.0%
TGAGTATGGACCTGTGGAAT+GGG - Chr1:4384470-4384489 MsG0180000319.01.T01:intron 45.0%
TGGATGGGATGTTCTTTCTC+TGG - Chr1:4390807-4390826 MsG0180000319.01.T01:intron 45.0%
TGGCCTGCATATATAGCACA+TGG - Chr1:4387142-4387161 MsG0180000319.01.T01:intron 45.0%
TGGTTGTAGCCATCCTCAAA+GGG + Chr1:4388210-4388229 None:intergenic 45.0%
TGTGTCGTGTCAATCGTATC+AGG - Chr1:4384642-4384661 MsG0180000319.01.T01:intron 45.0%
TTTCCAAGCCATGTGACTGT+AGG + Chr1:4385517-4385536 None:intergenic 45.0%
! ACATGGAATGTTGGGGTGTT+AGG - Chr1:4386645-4386664 MsG0180000319.01.T01:intron 45.0%
! ATGTGGACTGAGAATTGGTC+TGG - Chr1:4384898-4384917 MsG0180000319.01.T01:intron 45.0%
! CACTTTTGCTCAAGCCTTAG+AGG - Chr1:4391301-4391320 MsG0180000319.01.T01:CDS 45.0%
! CTCCCCCATTCAACTTTTCT+AGG + Chr1:4391059-4391078 None:intergenic 45.0%
! CTTGGCATTACCTTTTCCCT+CGG + Chr1:4388287-4388306 None:intergenic 45.0%
! CTTTTGCTCAAGCCTTAGAG+GGG - Chr1:4391303-4391322 MsG0180000319.01.T01:CDS 45.0%
! GTTTGGCTCAAGTATGTTCC+AGG - Chr1:4384036-4384055 MsG0180000319.01.T01:intron 45.0%
! TAGAGCACCCGTTTAGTAAG+CGG - Chr1:4389029-4389048 MsG0180000319.01.T01:intron 45.0%
! TATGATGGAATCGTCGTCAC+TGG + Chr1:4385996-4386015 None:intergenic 45.0%
! TCCTCCATTGATTGGACACA+AGG - Chr1:4386885-4386904 MsG0180000319.01.T01:intron 45.0%
! TGAGCCAGCTTTGATTTCTG+TGG - Chr1:4385489-4385508 MsG0180000319.01.T01:intron 45.0%
! TGCCTTCGAAACAAAGGCAT+TGG - Chr1:4391254-4391273 MsG0180000319.01.T01:intron 45.0%
! TTGCTCTGGTCGCACATTTT+AGG - Chr1:4386537-4386556 MsG0180000319.01.T01:intron 45.0%
!! ACCAAAGCATTGGTCGTCAT+TGG - Chr1:4387122-4387141 MsG0180000319.01.T01:intron 45.0%
!! AGTACTGAAGCACTGGAACT+TGG + Chr1:4390382-4390401 None:intergenic 45.0%
!! CACAAAATGGGCTGCTCAAA+TGG - Chr1:4384518-4384537 MsG0180000319.01.T01:intron 45.0%
!! TGGACTAGTGGCATATAAGC+AGG - Chr1:4388709-4388728 MsG0180000319.01.T01:intron 45.0%
!! TGTGCTTCTTGGATAGTGGA+TGG + Chr1:4382340-4382359 None:intergenic 45.0%
!! TAAATAAAAAAAATCATAAA+TGG - Chr1:4388689-4388708 MsG0180000319.01.T01:intron 5.0%
!!! AAAAATTTAGATTTTAAAAT+AGG + Chr1:4382568-4382587 None:intergenic 5.0%
!!! ATTTTTAATTCAAAATATTA+TGG + Chr1:4382598-4382617 None:intergenic 5.0%
!!! CTTTAAAAAAAAAAAAAAAT+AGG - Chr1:4388902-4388921 MsG0180000319.01.T01:intron 5.0%
!!! TAATTTTTTTTTTAATCTTT+TGG - Chr1:4387308-4387327 MsG0180000319.01.T01:intron 5.0%
!!! TATTTTAAAATCTAAATTTT+TGG - Chr1:4382567-4382586 MsG0180000319.01.T01:CDS 5.0%
!!! TATTTTAGATAAAATATTTA+TGG - Chr1:4382737-4382756 MsG0180000319.01.T01:intron 5.0%
!!! TTAATTTAGAATATATAAAT+TGG + Chr1:4386348-4386367 None:intergenic 5.0%
AAGAGTAGAGGGCTCTCTTC+TGG - Chr1:4389537-4389556 MsG0180000319.01.T01:intron 50.0%
AAGCACATTGTAGGAGGCAG+TGG - Chr1:4390664-4390683 MsG0180000319.01.T01:intron 50.0%
AAGGAATGCAGCACAGACAC+TGG + Chr1:4385669-4385688 None:intergenic 50.0%
ACAACCAAGACGTTCCCACT+TGG + Chr1:4387366-4387385 None:intergenic 50.0%
ACCAGCTACTCCACACATGT+TGG - Chr1:4390316-4390335 MsG0180000319.01.T01:intron 50.0%
ACCTGACTACAAATCCGGCA+AGG - Chr1:4390081-4390100 MsG0180000319.01.T01:intron 50.0%
ACCTTGCCGGATTTGTAGTC+AGG + Chr1:4390085-4390104 None:intergenic 50.0%
AGACCTCCCGCTTACTAAAC+GGG + Chr1:4389039-4389058 None:intergenic 50.0%
AGCACATTGTAGGAGGCAGT+GGG - Chr1:4390665-4390684 MsG0180000319.01.T01:intron 50.0%
AGGGGACAAGAGACTTGTCT+TGG - Chr1:4386694-4386713 MsG0180000319.01.T01:intron 50.0%
ATCTGCGACGGAATCGAGAT+CGG + Chr1:4389338-4389357 None:intergenic 50.0%
ATGTTGGATGGAGGTTGGAG+TGG + Chr1:4382380-4382399 None:intergenic 50.0%
CCATAAAAGGATGACTCCCG+TGG - Chr1:4385925-4385944 MsG0180000319.01.T01:intron 50.0%
CGAACACGCTGATACTGCTA+AGG + Chr1:4384618-4384637 None:intergenic 50.0%
CGACACAAAATCTGCGGCAA+CGG - Chr1:4385697-4385716 MsG0180000319.01.T01:intron 50.0%
CGAGAATGAGTATGGACCTG+TGG - Chr1:4384464-4384483 MsG0180000319.01.T01:intron 50.0%
CTCTGGTGCCTTCGAAACAA+AGG - Chr1:4391248-4391267 MsG0180000319.01.T01:intron 50.0%
CTGTGGATCCTACAGTCACA+TGG - Chr1:4385506-4385525 MsG0180000319.01.T01:intron 50.0%
GAGTGGAATGAGTGTACCTC+GGG + Chr1:4382363-4382382 None:intergenic 50.0%
GATCCTACAGTCACATGGCT+TGG - Chr1:4385511-4385530 MsG0180000319.01.T01:intron 50.0%
GCACCAATTTCCCATTCCAC+AGG + Chr1:4384483-4384502 None:intergenic 50.0%
GCCAATGACGACCAATGCTT+TGG + Chr1:4387126-4387145 None:intergenic 50.0%
GCTATAGCCACTACCCTTTG+AGG - Chr1:4388194-4388213 MsG0180000319.01.T01:CDS 50.0%
GCTCAAGTATGTTCCAGGGA+TGG - Chr1:4384041-4384060 MsG0180000319.01.T01:CDS 50.0%
GGACCTGTGGAATGGGAAAT+TGG - Chr1:4384477-4384496 MsG0180000319.01.T01:intron 50.0%
GGAGTGGAATGAGTGTACCT+CGG + Chr1:4382364-4382383 None:intergenic 50.0%
GGTACTCCTGGTATTGCGTT+TGG - Chr1:4390286-4390305 MsG0180000319.01.T01:intron 50.0%
GGTCATGGTTGAGTCCAAGT+GGG - Chr1:4387349-4387368 MsG0180000319.01.T01:intron 50.0%
GTCCCTACGTTTGTGCTGAA+TGG - Chr1:4383905-4383924 MsG0180000319.01.T01:intron 50.0%
GTTGTGCTTGAAGAATGGGG+AGG - Chr1:4387381-4387400 MsG0180000319.01.T01:CDS 50.0%
TAAGGCCCCGGAAATTTGCA+GGG + Chr1:4390936-4390955 None:intergenic 50.0%
TACCGAGCCCTGCAAATTTC+CGG - Chr1:4390926-4390945 MsG0180000319.01.T01:intron 50.0%
TAGCCATCCTCAAAGGGTAG+TGG + Chr1:4388204-4388223 None:intergenic 50.0%
TCTGCGACAATTGGTACTCC+TGG - Chr1:4390274-4390293 MsG0180000319.01.T01:intron 50.0%
TCTGCGGCAACGGTTACATT+TGG - Chr1:4385707-4385726 MsG0180000319.01.T01:intron 50.0%
TCTGCTCCAAACGCAATACC+AGG + Chr1:4390295-4390314 None:intergenic 50.0%
TCTTGCTTGCACATGTCCCA+AGG + Chr1:4384567-4384586 None:intergenic 50.0%
TGACAAGGGAGACTCCATGA+AGG - Chr1:4391017-4391036 MsG0180000319.01.T01:intron 50.0%
TGCGACCAGAGCAACCAAAA+GGG + Chr1:4386531-4386550 None:intergenic 50.0%
TGTCAAGCTAGCACAACAGC+TGG - Chr1:4383859-4383878 MsG0180000319.01.T01:intron 50.0%
TGTGCAGAGGATTTCCCGTT+TGG - Chr1:4384019-4384038 MsG0180000319.01.T01:intron 50.0%
TTAAGGCCCCGGAAATTTGC+AGG + Chr1:4390937-4390956 None:intergenic 50.0%
TTGAATGGGGGAGCTGTTGT+GGG - Chr1:4391066-4391085 MsG0180000319.01.T01:intron 50.0%
! ACCAAAAGCGCAGTGTGCAA+GGG - Chr1:4390689-4390708 MsG0180000319.01.T01:intron 50.0%
! AGAGCACCCGTTTAGTAAGC+GGG - Chr1:4389030-4389049 MsG0180000319.01.T01:intron 50.0%
! CCACGGGAGTCATCCTTTTA+TGG + Chr1:4385928-4385947 None:intergenic 50.0%
! GAATGGGAAATTGGTGCTCC+TGG - Chr1:4384486-4384505 MsG0180000319.01.T01:intron 50.0%
! GGAAATTGGTGCTCCTGGAA+AGG - Chr1:4384491-4384510 MsG0180000319.01.T01:intron 50.0%
! TAGCCACTACCCTTTGAGGA+TGG - Chr1:4388198-4388217 MsG0180000319.01.T01:CDS 50.0%
! TAGTGTTGCTGTGGGTCTTC+CGG - Chr1:4386479-4386498 MsG0180000319.01.T01:intron 50.0%
! TGTTCGATGCACACCCCTTT+TGG - Chr1:4386514-4386533 MsG0180000319.01.T01:intron 50.0%
!! TCTGTTCTGAAAGCCATCCC+TGG + Chr1:4384057-4384076 None:intergenic 50.0%
!!! TGCTGGTTTTACTGCTGCTG+TGG - Chr1:4390222-4390241 MsG0180000319.01.T01:intron 50.0%
ACCGAGCCCTGCAAATTTCC+GGG - Chr1:4390927-4390946 MsG0180000319.01.T01:intron 55.0%
ACTTACGAGACCGGAGTTGG+TGG + Chr1:4389410-4389429 None:intergenic 55.0%
AGCAGCTCTCGTAGCTCAGT+TGG - Chr1:4389005-4389024 MsG0180000319.01.T01:intron 55.0%
AGTGTGCAAGGGCTCTTCAG+TGG - Chr1:4390700-4390719 MsG0180000319.01.T01:intron 55.0%
ATCTCCTCCTCCACCAACTC+CGG - Chr1:4389397-4389416 MsG0180000319.01.T01:CDS 55.0%
CCAATATCGGAGAAGAGGCC+AGG + Chr1:4389209-4389228 None:intergenic 55.0%
CCTGGCCTCTTCTCCGATAT+TGG - Chr1:4389206-4389225 MsG0180000319.01.T01:intron 55.0%
CGGGTGTGCTTCTTGGATAG+TGG + Chr1:4382344-4382363 None:intergenic 55.0%
CGGTCATGGTTGAGTCCAAG+TGG - Chr1:4387348-4387367 MsG0180000319.01.T01:intron 55.0%
CTGCAAGCAACCGAGGGAAA+AGG - Chr1:4388274-4388293 MsG0180000319.01.T01:intron 55.0%
CTTGAGCTGCAAGCAACCGA+GGG - Chr1:4388268-4388287 MsG0180000319.01.T01:intron 55.0%
CTTGGACTCAACCATGACCG+AGG + Chr1:4387348-4387367 None:intergenic 55.0%
GAAGATGCTGACAGACCAGG+TGG + Chr1:4385752-4385771 None:intergenic 55.0%
GAGTCCAAGTGGGAACGTCT+TGG - Chr1:4387359-4387378 MsG0180000319.01.T01:intron 55.0%
GCACATTGTAGGAGGCAGTG+GGG - Chr1:4390666-4390685 MsG0180000319.01.T01:intron 55.0%
GCCAACATGTGTGGAGTAGC+TGG + Chr1:4390320-4390339 None:intergenic 55.0%
GCGACCAGAGCAACCAAAAG+GGG + Chr1:4386530-4386549 None:intergenic 55.0%
GGAATCGTCGTCACTGGAGT+AGG + Chr1:4385990-4386009 None:intergenic 55.0%
GTGCGACCAGAGCAACCAAA+AGG + Chr1:4386532-4386551 None:intergenic 55.0%
GTTGAATGGGGGAGCTGTTG+TGG - Chr1:4391065-4391084 MsG0180000319.01.T01:intron 55.0%
TGGGCTGCTCAAATGGCTGT+AGG - Chr1:4384525-4384544 MsG0180000319.01.T01:intron 55.0%
TGTACCTCGGGTGTGCTTCT+TGG + Chr1:4382351-4382370 None:intergenic 55.0%
! ATGTGCATGTTGGTGCCCGT+TGG + Chr1:4383107-4383126 None:intergenic 55.0%
! CTATCCAAGAAGCACACCCG+AGG - Chr1:4382344-4382363 MsG0180000319.01.T01:CDS 55.0%
! GACCAAAAGCGCAGTGTGCA+AGG - Chr1:4390688-4390707 MsG0180000319.01.T01:intron 55.0%
! GGACTGAGAATTGGTCTGGC+TGG - Chr1:4384902-4384921 MsG0180000319.01.T01:intron 55.0%
!! CACACCCCTTTTGGTTGCTC+TGG - Chr1:4386523-4386542 MsG0180000319.01.T01:intron 55.0%
ACAACCTTTGACGCGCCGAG+TGG - Chr1:4387041-4387060 MsG0180000319.01.T01:intron 60.0%
CCCCGGAAATTTGCAGGGCT+CGG + Chr1:4390931-4390950 None:intergenic 60.0%
CCGAGCCCTGCAAATTTCCG+GGG - Chr1:4390928-4390947 MsG0180000319.01.T01:intron 60.0%
GAATGGGGAGGTGACCCTAC+TGG - Chr1:4387393-4387412 MsG0180000319.01.T01:CDS 60.0%
GCACCCGTTTAGTAAGCGGG+AGG - Chr1:4389033-4389052 MsG0180000319.01.T01:intron 60.0%
GCTTGAGCTGCAAGCAACCG+AGG - Chr1:4388267-4388286 MsG0180000319.01.T01:intron 60.0%
GGAGAAGAGGCCAGGTCCTT+TGG + Chr1:4389201-4389220 None:intergenic 60.0%
GGTGTGGACGTGTCAGTGAG+AGG + Chr1:4389657-4389676 None:intergenic 60.0%
TCGTCGTCACTGGAGTAGGC+AGG + Chr1:4385986-4386005 None:intergenic 60.0%
! GCCCTTGCACACTGCGCTTT+TGG + Chr1:4390693-4390712 None:intergenic 60.0%
!! GGAGTTGGTGGAGGAGGAGA+TGG + Chr1:4389398-4389417 None:intergenic 60.0%
!! TACGAGACCGGAGTTGGTGG+AGG + Chr1:4389407-4389426 None:intergenic 60.0%
GCCACTGGATCGCTGCCACT+CGG + Chr1:4387059-4387078 None:intergenic 65.0%
!! GAGACCGGAGTTGGTGGAGG+AGG + Chr1:4389404-4389423 None:intergenic 65.0%
GCCGAGTGGCAGCGATCCAG+TGG - Chr1:4387055-4387074 MsG0180000319.01.T01:intron 70.0%
GCTGCCACTCGGCGCGTCAA+AGG + Chr1:4387048-4387067 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 4382114 4391550 4382114 ID=MsG0180000319.01;Name=MsG0180000319.01
Chr1 mRNA 4382114 4391550 4382114 ID=MsG0180000319.01.T01;Parent=MsG0180000319.01;Name=MsG0180000319.01.T01;_AED=0.48;_eAED=0.49;_QI=72|0.54|0.52|1|1|1|23|230|861
Chr1 exon 4391299 4391550 4391299 ID=MsG0180000319.01.T01:exon:5593;Parent=MsG0180000319.01.T01
Chr1 exon 4389928 4390022 4389928 ID=MsG0180000319.01.T01:exon:5594;Parent=MsG0180000319.01.T01
Chr1 exon 4389784 4389823 4389784 ID=MsG0180000319.01.T01:exon:5595;Parent=MsG0180000319.01.T01
Chr1 exon 4389363 4389455 4389363 ID=MsG0180000319.01.T01:exon:5596;Parent=MsG0180000319.01.T01
Chr1 exon 4389059 4389202 4389059 ID=MsG0180000319.01.T01:exon:5597;Parent=MsG0180000319.01.T01
Chr1 exon 4388741 4388829 4388741 ID=MsG0180000319.01.T01:exon:5598;Parent=MsG0180000319.01.T01
Chr1 exon 4388550 4388639 4388550 ID=MsG0180000319.01.T01:exon:5599;Parent=MsG0180000319.01.T01
Chr1 exon 4388317 4388444 4388317 ID=MsG0180000319.01.T01:exon:5600;Parent=MsG0180000319.01.T01
Chr1 exon 4388115 4388236 4388115 ID=MsG0180000319.01.T01:exon:5601;Parent=MsG0180000319.01.T01
Chr1 exon 4387946 4388020 4387946 ID=MsG0180000319.01.T01:exon:5602;Parent=MsG0180000319.01.T01
Chr1 exon 4387594 4387756 4387594 ID=MsG0180000319.01.T01:exon:5603;Parent=MsG0180000319.01.T01
Chr1 exon 4387363 4387446 4387363 ID=MsG0180000319.01.T01:exon:5604;Parent=MsG0180000319.01.T01
Chr1 exon 4387164 4387273 4387164 ID=MsG0180000319.01.T01:exon:5605;Parent=MsG0180000319.01.T01
Chr1 exon 4386930 4387040 4386930 ID=MsG0180000319.01.T01:exon:5606;Parent=MsG0180000319.01.T01
Chr1 exon 4386747 4386827 4386747 ID=MsG0180000319.01.T01:exon:5607;Parent=MsG0180000319.01.T01
Chr1 exon 4386561 4386623 4386561 ID=MsG0180000319.01.T01:exon:5608;Parent=MsG0180000319.01.T01
Chr1 exon 4386399 4386448 4386399 ID=MsG0180000319.01.T01:exon:5609;Parent=MsG0180000319.01.T01
Chr1 exon 4386239 4386329 4386239 ID=MsG0180000319.01.T01:exon:5610;Parent=MsG0180000319.01.T01
Chr1 exon 4384246 4384308 4384246 ID=MsG0180000319.01.T01:exon:5611;Parent=MsG0180000319.01.T01
Chr1 exon 4384038 4384148 4384038 ID=MsG0180000319.01.T01:exon:5612;Parent=MsG0180000319.01.T01
Chr1 exon 4383562 4383648 4383562 ID=MsG0180000319.01.T01:exon:5613;Parent=MsG0180000319.01.T01
Chr1 exon 4383260 4383468 4383260 ID=MsG0180000319.01.T01:exon:5614;Parent=MsG0180000319.01.T01
Chr1 exon 4382114 4382650 4382114 ID=MsG0180000319.01.T01:exon:5615;Parent=MsG0180000319.01.T01
Chr1 five_prime_UTR 4391479 4391550 4391479 ID=MsG0180000319.01.T01:five_prime_utr;Parent=MsG0180000319.01.T01
Chr1 CDS 4391299 4391478 4391299 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4389928 4390022 4389928 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4389784 4389823 4389784 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4389363 4389455 4389363 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4389059 4389202 4389059 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4388741 4388829 4388741 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4388550 4388639 4388550 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4388317 4388444 4388317 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4388115 4388236 4388115 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4387946 4388020 4387946 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4387594 4387756 4387594 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4387363 4387446 4387363 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4387164 4387273 4387164 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4386930 4387040 4386930 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4386747 4386827 4386747 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4386561 4386623 4386561 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4386399 4386448 4386399 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4386239 4386329 4386239 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4384246 4384308 4384246 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4384038 4384148 4384038 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4383562 4383648 4383562 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4383260 4383468 4383260 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 CDS 4382344 4382650 4382344 ID=MsG0180000319.01.T01:cds;Parent=MsG0180000319.01.T01
Chr1 three_prime_UTR 4382114 4382343 4382114 ID=MsG0180000319.01.T01:three_prime_utr;Parent=MsG0180000319.01.T01
Gene Sequence

>MsG0180000319.01.T01

ATGATGGAGAATTTAACAATGCAAAAAGAGTTTCACATGCTGGGGTTGATTTTATTATTGTCTTTGTGGGTTTGTGGTGTTACTGCTTCAGTGAGTTATGATCACAAAGCCCTTGTGATTGATGGACAAAGAAGAATTTTGATATCTGGCTCCATCCACTATCCAAGAAGCACACCCGAGATGTGGCCAGACTTATTTCAAAAGGCTAAAGATGGAGGCCTTGATGTTATTCAAACCTATGTATTTTGGAATGGACATGAGCCTTCTCCTGAAATATTTGACTTAGTAAAGTTTGTCAAGCTAGCACAACAGCTGGCTGCTATGCAAAAATTCACGACCAAAATTGTGAACATGATGAAAGCAGAGAGTTTGTTTCAAACTCAGGGTGGTCCAATAATTATGTCTCAGATCGAGAATGAGTATGGACCTGTGGAATGGGAAATTGGTGCTCCTGGAAAGGCTTACACAAAATGGGCTGCTCAAATGGCTGTAGGTCTAGATACTGGTGTACCTTGGGACATGTGCAAGCAAGAAGACGCACCTGATCCCGTTATTGACACTTGCAATGGATATTACTGTGAAAACTTCACTCCCAACGAGAACTTTAAACCCAAAATGTGGACTGAGAATTGGTCTGGCTGGTACACTGATTTCGGTGGTGCTCTATCTCATAGACCAACTGAAGACTTGGCATACTCAGTTGCTAGATTCATACAAATCGTGGCTCCTTTAAACTTTGATTTTAGTCTCATATCTTTATATTTGATTGTATATCATGGAGGAACTAATTTTGGTCGAACATCTAGTGGCCTTTTTATTGCCACAAGCTATGATTATGATGCTCCTATTGATGAATATGGACTTCCAAATGAACCAAAATGGAGCCATCTGAAAAATTTACATAAAGCAATAAAACAATGTGAGCCAGCTTTGATTTCTGTGGATCCTACAGTCACATGGCTTGGAAATAAAAACCTTGAGGCGCATGTGTACTACGTAAGTACCAGTGTCTGTGCTGCATTCCTTGCAAACTACGACACAAAATCTGCGGCAACGGTTAATGGACATAGCTTCCATAAAAGGATGACTCCCGTGGATACTACATTTGATTGGCAGTCATACAGTGAAGAGCCTGCCTACTCCAGTGACGACGATTCCATCATAGCAATGCACTTTGGGAGCAAATCAACGTTACTCGCGATTCTTCAGATTATCTGTGAATGGTCATCTCCTACCTTACCATTTAAATTTGTAAATTCAGCAGGTCATGTTCTACATGTTTTTGTTAATGGTCAACTTTCAGGAACTGTGTATGGAGGATTGGATAATCCTAAATTAACATTTAGTGAAAGTGTTAACCTAAAGGTCGGCAATAACAAGATTTCTTTACTTAGTGTTGCTGTGGGTCTTCCGAATGTTGGTCTGCACTTTGAAACATGGAATGTTGGGGTGTTAGGCCCAGTAACATTGAAGGGTCTAGATGAGGGGACAAGAGACTTGTCTTGGCAGAAATGGTCTTACAAGGTTGGACTAAAGGGTGAATCTTTGAGCCTTCATACCATAACTGGAAGTTCCTCCATTGATTGGACACAAGGATCATCATTGACAACCTTTGACGCGCCGAGTGGCAGCGATCCAGTGGCACTAGATATGAGTAGCATGGGAAAGGACAAATTGTGGAGAACCAACACAGAAATGGTAAGATTTCATATAACGAGGTATCATATTCCTCGGTCATGGTTGAGTCCAAGTGGGAACGTCTTGGTTGTGCTTGAAGAATGGGGAGGTGACCCTACTGGAATTTCATTGATATTCTCACAAAAGATTACAACTCCGATCAAAAACTCACCATCTCCTCCTCCACCAACTCCGGATTTGAACTCTACATTATTGAAGAGTAGAGGGCTCTCTTCTGGAGATGTTGCTGCTCAATTTAAGCATAATAACAAAACTCTTCATTTCAAAGTTGATACTGAGTCAACTGTGTTGACAACATTTAGTTCGACAGATTTTGTGCCTTCTGCGAAAGTTCTTGCTTCTGTTCGATTACCTGACTACAAATCCGGCAAGATTGAGGTTCAATATCTTCATGATCATGCTGGTTTTACTGCTGCTGTGGATTTAAATCGAAAGCCTGCTATTGATTTTTCTGCGACAATTGGTACTCCTGGTATTGCGTTTGGAGCAGAAACCAGCTACTCCACACATGTTGGCAACTTTACAAAGTATAATGCTGGATTGTGCTTGAAGCTGCCAAGTTCCAGTGCTTCAGTACTTTTAGCTGACAAGGGAGACTCCATGAAGGTATCGTACTTGCGTGACCTAGAAAAGTTGAATGGGGGAGCTGTTGTGGGAGAAATTAGCAGAAGGTTCTCTACAAATGAGAACACGTTGACGGTTGGATGTTCTTATGTGGTTGATCCTCAAACAACTGTGAAGGCAAAGCTGAACAACCATGGCAATCTTGAGGCTGTATTGCAACATCATCTTACACATAGGTCATTCTTGACAATCTCTGGTGCCTTCGAAACAAAGGCATTGGAAAATAGTCCCAAGTTTGGTTTCTCACTTTTGCTCAAGCCTTAG
Protein sequence

>MsG0180000319.01.T01

MMENLTMQKEFHMLGLILLLSLWVCGVTASVSYDHKALVIDGQRRILISGSIHYPRSTPEMWPDLFQKAKDGGLDVIQTYVFWNGHEPSPEIFDLVKFVKLAQQLAAMQKFTTKIVNMMKAESLFQTQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWDMCKQEDAPDPVIDTCNGYYCENFTPNENFKPKMWTENWSGWYTDFGGALSHRPTEDLAYSVARFIQIVAPLNFDFSLISLYLIVYHGGTNFGRTSSGLFIATSYDYDAPIDEYGLPNEPKWSHLKNLHKAIKQCEPALISVDPTVTWLGNKNLEAHVYYVSTSVCAAFLANYDTKSAATVNGHSFHKRMTPVDTTFDWQSYSEEPAYSSDDDSIIAMHFGSKSTLLAILQIICEWSSPTLPFKFVNSAGHVLHVFVNGQLSGTVYGGLDNPKLTFSESVNLKVGNNKISLLSVAVGLPNVGLHFETWNVGVLGPVTLKGLDEGTRDLSWQKWSYKVGLKGESLSLHTITGSSSIDWTQGSSLTTFDAPSGSDPVALDMSSMGKDKLWRTNTEMVRFHITRYHIPRSWLSPSGNVLVVLEEWGGDPTGISLIFSQKITTPIKNSPSPPPPTPDLNSTLLKSRGLSSGDVAAQFKHNNKTLHFKVDTESTVLTTFSSTDFVPSAKVLASVRLPDYKSGKIEVQYLHDHAGFTAAVDLNRKPAIDFSATIGTPGIAFGAETSYSTHVGNFTKYNAGLCLKLPSSSASVLLADKGDSMKVSYLRDLEKLNGGAVVGEISRRFSTNENTLTVGCSYVVDPQTTVKAKLNNHGNLEAVLQHHLTHRSFLTISGAFETKALENSPKFGFSLLLKP*