AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024370.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024370.01.T01 MTR_5g010020 97.598 333 5 2 1 331 1 332 0.0 669
MsG0580024370.01.T01 MTR_8g098860 60.983 346 88 15 1 335 1 310 6.48e-118 343
MsG0580024370.01.T01 MTR_8g017440 67.568 148 45 2 1 148 1 145 1.53e-66 213
MsG0580024370.01.T01 MTR_8g017540 78.448 116 25 0 1 116 47 162 5.74e-66 213
MsG0580024370.01.T01 MTR_8g017500 75.862 116 28 0 1 116 1 116 2.47e-64 207
MsG0580024370.01.T01 MTR_2g099740 45.290 276 106 7 1 245 1 262 2.68e-64 209
MsG0580024370.01.T01 MTR_4g105130 52.475 202 67 4 1 178 1 197 8.26e-64 206
MsG0580024370.01.T01 MTR_1g085040 72.269 119 33 0 1 119 1 119 2.66e-63 205
MsG0580024370.01.T01 MTR_1g085640 71.186 118 34 0 1 118 1 118 9.40e-63 204
MsG0580024370.01.T01 MTR_7g110830 72.034 118 33 0 1 118 1 118 5.76e-62 202
MsG0580024370.01.T01 MTR_2g064160 74.138 116 29 1 1 116 1 115 2.96e-61 198
MsG0580024370.01.T01 MTR_8g017390 73.504 117 30 1 1 116 1 117 1.46e-60 201
MsG0580024370.01.T01 MTR_1g112760 62.238 143 44 1 3 145 4 136 4.07e-60 192
MsG0580024370.01.T01 MTR_3g077110 70.339 118 35 0 1 118 1 118 1.53e-59 195
MsG0580024370.01.T01 MTR_8g017340 72.650 117 31 1 1 116 1 117 4.54e-59 197
MsG0580024370.01.T01 MTR_8g017350 72.650 117 31 1 1 116 1 117 3.46e-58 198
MsG0580024370.01.T01 MTR_5g029840 55.844 154 67 1 1 154 1 153 9.24e-58 190
MsG0580024370.01.T01 MTR_7g111290 72.477 109 30 0 1 109 1 109 2.43e-57 190
MsG0580024370.01.T01 MTR_2g089620 45.161 217 97 4 1 217 1 195 6.32e-56 185
MsG0580024370.01.T01 MTR_1g100653 66.387 119 40 0 1 119 1 119 3.60e-55 182
MsG0580024370.01.T01 MTR_3g028740 67.273 110 36 0 8 117 18 127 4.97e-55 183
MsG0580024370.01.T01 MTR_4g065017 51.934 181 67 6 11 172 16 195 8.48e-55 182
MsG0580024370.01.T01 MTR_2g097910 59.420 138 52 2 12 145 20 157 1.43e-53 179
MsG0580024370.01.T01 MTR_6g009430 61.864 118 45 0 1 118 1 118 1.65e-53 179
MsG0580024370.01.T01 MTR_4g478180 53.896 154 66 2 1 150 2 154 1.75e-53 179
MsG0580024370.01.T01 MTR_6g012690 61.864 118 45 0 1 118 1 118 1.20e-52 177
MsG0580024370.01.T01 MTR_8g095390 65.517 116 40 0 1 116 1 116 1.47e-52 176
MsG0580024370.01.T01 MTR_5g079670 63.717 113 41 0 6 118 5 117 4.88e-52 171
MsG0580024370.01.T01 MTR_4g091490 55.479 146 57 2 1 145 1 139 5.32e-52 176
MsG0580024370.01.T01 MTR_3g074520 60.345 116 46 0 1 116 1 116 5.90e-52 175
MsG0580024370.01.T01 MTR_3g097450 62.069 116 44 0 1 116 1 116 1.47e-51 173
MsG0580024370.01.T01 MTR_2g011660 63.025 119 43 1 1 118 1 119 2.90e-51 173
MsG0580024370.01.T01 MTR_4g073420 61.207 116 45 0 1 116 1 116 3.62e-51 171
MsG0580024370.01.T01 MTR_1g100667 66.055 109 37 0 11 119 12 120 4.36e-51 171
MsG0580024370.01.T01 MTR_7g076740 53.741 147 66 2 1 146 1 146 4.80e-51 172
MsG0580024370.01.T01 MTR_5g078140 61.864 118 45 0 1 118 1 118 1.17e-50 171
MsG0580024370.01.T01 MTR_3g065440 61.864 118 45 0 1 118 1 118 1.61e-50 171
MsG0580024370.01.T01 MTR_7g115650 43.478 207 101 5 1 206 1 192 1.89e-50 167
MsG0580024370.01.T01 MTR_1g017000 61.538 117 44 1 1 116 1 117 1.93e-50 168
MsG0580024370.01.T01 MTR_7g011170 60.169 118 47 0 1 118 1 118 3.02e-50 170
MsG0580024370.01.T01 MTR_2g034790 54.795 146 65 1 1 146 1 145 4.76e-50 170
MsG0580024370.01.T01 MTR_4g102380 62.712 118 44 0 1 118 1 118 8.80e-50 167
MsG0580024370.01.T01 MTR_7g010210 62.185 119 45 0 1 119 1 119 1.07e-49 169
MsG0580024370.01.T01 MTR_4g082290 56.391 133 57 1 1 133 1 132 1.10e-49 171
MsG0580024370.01.T01 MTR_4g082230 55.639 133 58 1 1 133 1 132 1.13e-49 171
MsG0580024370.01.T01 MTR_4g125520 53.623 138 64 0 1 138 1 138 1.39e-49 168
MsG0580024370.01.T01 MTR_7g010210 61.157 121 47 0 1 121 1 121 1.57e-49 167
MsG0580024370.01.T01 MTR_5g007370 59.524 126 50 1 8 133 8 132 2.29e-49 167
MsG0580024370.01.T01 MTR_8g031360 55.102 147 63 3 1 145 1 146 2.39e-49 167
MsG0580024370.01.T01 MTR_1g076150 57.895 133 54 1 1 131 1 133 1.06e-48 164
MsG0580024370.01.T01 MTR_4g121460 61.207 116 45 0 1 116 1 116 1.10e-48 166
MsG0580024370.01.T01 MTR_7g117730 58.974 117 48 0 1 117 1 117 1.41e-48 164
MsG0580024370.01.T01 MTR_6g055910 65.138 109 38 0 11 119 13 121 4.83e-48 163
MsG0580024370.01.T01 MTR_4g057635 51.948 154 66 2 1 153 1 147 1.06e-47 164
MsG0580024370.01.T01 MTR_0140s0030 57.724 123 52 0 1 123 2 124 6.68e-47 162
MsG0580024370.01.T01 MTR_0489s0020 57.724 123 52 0 1 123 2 124 6.68e-47 162
MsG0580024370.01.T01 MTR_3g461490 59.483 116 47 0 1 116 1 116 7.35e-47 161
MsG0580024370.01.T01 MTR_8g027345 52.174 138 62 1 1 138 1 134 1.04e-46 160
MsG0580024370.01.T01 MTR_2g067420 62.385 109 41 0 2 110 4 112 1.10e-46 161
MsG0580024370.01.T01 MTR_2g089450 52.593 135 62 1 7 139 7 141 1.34e-46 158
MsG0580024370.01.T01 MTR_7g087130 59.322 118 48 0 1 118 1 118 7.16e-46 159
MsG0580024370.01.T01 MTR_3g103570 59.829 117 46 1 1 116 1 117 9.15e-46 159
MsG0580024370.01.T01 MTR_1g043050 53.125 128 60 0 1 128 1 128 1.21e-45 156
MsG0580024370.01.T01 MTR_7g096930 57.759 116 49 0 1 116 1 116 1.52e-45 156
MsG0580024370.01.T01 MTR_7g102110 58.120 117 48 1 1 116 1 117 2.49e-45 156
MsG0580024370.01.T01 MTR_4g485530 57.500 120 51 0 1 120 1 120 3.68e-45 153
MsG0580024370.01.T01 MTR_1g017140 58.120 117 48 1 1 116 1 117 3.79e-45 157
MsG0580024370.01.T01 MTR_2g095520 52.899 138 64 1 1 137 1 138 3.92e-45 157
MsG0580024370.01.T01 MTR_7g035075 57.258 124 51 1 1 122 1 124 6.03e-45 153
MsG0580024370.01.T01 MTR_0251s0050 58.036 112 47 0 5 116 6 117 6.27e-45 155
MsG0580024370.01.T01 MTR_5g014990 58.120 117 48 1 1 116 1 117 7.59e-45 155
MsG0580024370.01.T01 MTR_3g039990 58.475 118 49 0 1 118 2 119 8.23e-45 155
MsG0580024370.01.T01 MTR_1g043080 57.759 116 49 0 1 116 1 116 8.36e-45 154
MsG0580024370.01.T01 MTR_3g083540 58.559 111 46 0 6 116 35 145 9.16e-45 155
MsG0580024370.01.T01 MTR_6g090405 55.645 124 54 1 1 123 1 124 1.47e-44 153
MsG0580024370.01.T01 MTR_6g012180 61.321 106 41 0 6 111 6 111 3.48e-44 154
MsG0580024370.01.T01 MTR_0008s0390 57.658 111 47 0 5 115 6 116 1.41e-43 151
MsG0580024370.01.T01 MTR_0008s0470 56.757 111 48 0 5 115 6 116 1.87e-43 151
MsG0580024370.01.T01 MTR_4g097570 60.000 110 43 1 1 109 1 110 5.37e-43 150
MsG0580024370.01.T01 MTR_4g128670 59.459 111 44 1 1 110 1 111 7.74e-43 151
MsG0580024370.01.T01 MTR_6g006030 56.667 120 50 1 1 118 1 120 1.14e-42 147
MsG0580024370.01.T01 MTR_2g089420 56.034 116 51 0 7 122 6 121 2.14e-42 152
MsG0580024370.01.T01 MTR_1g110460 57.273 110 47 0 9 118 23 132 2.41e-42 149
MsG0580024370.01.T01 MTR_4g097570 59.459 111 43 2 1 109 1 111 2.09e-41 146
MsG0580024370.01.T01 MTR_8g020490 56.881 109 47 0 10 118 6 114 2.77e-41 145
MsG0580024370.01.T01 MTR_7g109320 58.621 116 48 0 1 116 1 116 5.40e-41 147
MsG0580024370.01.T01 MTR_4g100720 59.813 107 43 0 9 115 10 116 9.84e-41 141
MsG0580024370.01.T01 MTR_5g042030 59.048 105 43 0 12 116 7 111 1.48e-40 144
MsG0580024370.01.T01 MTR_1g086510 54.701 117 53 0 2 118 11 127 8.83e-40 141
MsG0580024370.01.T01 MTR_3g052430 57.944 107 45 0 12 118 41 147 1.09e-39 147
MsG0580024370.01.T01 MTR_3g052450 54.955 111 50 0 8 118 36 146 1.49e-39 146
MsG0580024370.01.T01 MTR_1g045610 54.386 114 52 0 4 117 13 126 1.56e-39 140
MsG0580024370.01.T01 MTR_0008s0280 56.075 107 47 0 8 114 8 114 2.61e-39 139
MsG0580024370.01.T01 MTR_0063s0090 55.660 106 47 0 8 113 8 113 3.83e-39 138
MsG0580024370.01.T01 MTR_8g042410 56.604 106 46 0 12 117 37 142 6.19e-39 145
MsG0580024370.01.T01 MTR_3g011610 56.604 106 46 0 12 117 37 142 7.94e-39 144
MsG0580024370.01.T01 MTR_1g073170 54.955 111 50 0 5 115 13 123 2.25e-38 137
MsG0580024370.01.T01 MTR_1g086530 55.140 107 48 0 12 118 33 139 5.01e-38 137
MsG0580024370.01.T01 MTR_1g021230 55.660 106 47 0 12 117 57 162 2.56e-36 136
MsG0580024370.01.T01 MTR_8g060940 56.436 101 44 0 8 108 3 103 6.13e-36 130
MsG0580024370.01.T01 MTR_4g063100 50.000 110 55 0 6 115 1 110 1.75e-35 129
MsG0580024370.01.T01 MTR_0247s0040 53.846 104 48 0 7 110 2 105 2.74e-35 127
MsG0580024370.01.T01 MTR_0197s0010 56.000 100 44 0 17 116 6 105 3.43e-35 128
MsG0580024370.01.T01 MTR_2g096380 47.826 115 60 0 9 123 3 117 5.28e-35 128
MsG0580024370.01.T01 MTR_5g079120 43.609 133 75 0 8 140 57 189 1.49e-34 128
MsG0580024370.01.T01 MTR_1g062940 51.887 106 51 0 12 117 6 111 1.80e-34 126
MsG0580024370.01.T01 MTR_0193s0090 50.000 110 55 0 7 116 2 111 2.14e-34 125
MsG0580024370.01.T01 MTR_2g033170 57.009 107 46 0 12 118 24 130 2.39e-34 128
MsG0580024370.01.T01 MTR_7g017260 44.681 141 74 2 8 144 21 161 2.83e-34 127
MsG0580024370.01.T01 MTR_5g079220 49.091 110 56 0 7 116 16 125 9.72e-34 125
MsG0580024370.01.T01 MTR_5g078950 54.455 101 46 0 8 108 3 103 1.20e-33 125
MsG0580024370.01.T01 MTR_2g088170 55.660 106 47 0 12 117 29 134 1.38e-33 129
MsG0580024370.01.T01 MTR_4g123040 56.075 107 47 0 12 118 24 130 1.70e-33 126
MsG0580024370.01.T01 MTR_5g079290 50.476 105 52 0 12 116 17 121 2.39e-33 124
MsG0580024370.01.T01 MTR_8g006470 49.565 115 57 1 4 117 2 116 2.62e-33 125
MsG0580024370.01.T01 MTR_5g062790 45.902 122 65 1 5 125 2 123 1.78e-32 123
MsG0580024370.01.T01 MTR_5g078910 47.664 107 56 0 10 116 5 111 4.24e-32 122
MsG0580024370.01.T01 MTR_5g078930 49.550 111 55 1 6 115 2 112 4.51e-32 119
MsG0580024370.01.T01 MTR_5g078800 49.533 107 54 0 10 116 5 111 5.11e-32 120
MsG0580024370.01.T01 MTR_4g029540 49.533 107 53 1 12 117 10 116 1.01e-31 120
MsG0580024370.01.T01 MTR_0001s0360 49.533 107 54 0 10 116 5 111 1.27e-31 119
MsG0580024370.01.T01 MTR_1g083630 41.212 165 86 3 11 171 11 168 1.57e-31 125
MsG0580024370.01.T01 MTR_3g045430 46.429 112 60 0 5 116 6 117 3.80e-31 119
MsG0580024370.01.T01 MTR_5g078860 47.664 107 56 0 10 116 5 111 1.44e-30 118
MsG0580024370.01.T01 MTR_5g088080 49.533 107 52 2 13 118 13 118 1.76e-30 117
MsG0580024370.01.T01 MTR_5g088150 49.533 107 52 2 13 118 13 118 1.76e-30 117
MsG0580024370.01.T01 MTR_5g488210 49.533 107 52 2 13 118 13 118 1.76e-30 117
MsG0580024370.01.T01 MTR_5g088640 49.074 108 53 2 12 118 12 118 1.80e-30 117
MsG0580024370.01.T01 MTR_7g111290 72.727 66 18 0 44 109 2 67 2.71e-30 118
MsG0580024370.01.T01 MTR_5g007300 62.338 77 29 0 12 88 64 140 3.82e-30 112
MsG0580024370.01.T01 MTR_6g055910 65.333 75 26 0 45 119 18 92 3.86e-30 115
MsG0580024370.01.T01 MTR_5g488170 49.533 107 52 2 13 118 13 118 4.32e-30 115
MsG0580024370.01.T01 MTR_4g063100 63.889 72 26 0 44 115 10 81 4.94e-29 112
MsG0580024370.01.T01 MTR_3g463400 44.144 111 61 1 14 124 133 242 1.09e-28 115
MsG0580024370.01.T01 MTR_5g070020 39.744 156 83 4 14 169 122 266 3.61e-28 112
MsG0580024370.01.T01 MTR_5g088610 38.994 159 90 3 5 162 2 154 4.24e-28 112
MsG0580024370.01.T01 MTR_5g016510 52.941 102 47 1 14 115 5 105 1.00e-27 110
MsG0580024370.01.T01 MTR_4g019370 49.020 102 51 1 14 115 38 138 1.15e-27 111
MsG0580024370.01.T01 MTR_4g094982 50.980 102 49 1 14 115 5 105 4.28e-27 107
MsG0580024370.01.T01 MTR_2g096380 56.250 80 35 0 44 123 19 98 5.49e-27 106
MsG0580024370.01.T01 MTR_8g017480 84.615 52 8 0 1 52 1 52 9.58e-27 100
MsG0580024370.01.T01 MTR_6g074860 45.161 124 58 3 14 134 4 120 2.15e-26 105
MsG0580024370.01.T01 MTR_1g057980 37.255 153 92 2 9 158 72 223 3.25e-26 106
MsG0580024370.01.T01 MTR_1g085880 45.600 125 66 2 10 132 9 133 3.80e-26 103
MsG0580024370.01.T01 MTR_6g015455 51.961 102 48 1 14 115 5 105 6.24e-26 109
MsG0580024370.01.T01 MTR_4g082040 43.802 121 62 2 2 122 98 212 1.64e-25 106
MsG0580024370.01.T01 MTR_5g041570 45.536 112 60 1 11 122 131 241 1.70e-25 106
MsG0580024370.01.T01 MTR_6g027360 44.248 113 60 2 11 122 75 185 1.76e-25 104
MsG0580024370.01.T01 MTR_1g085770 45.600 125 66 2 10 132 9 133 2.36e-25 103
MsG0580024370.01.T01 MTR_4g128190 44.348 115 49 3 12 125 11 111 3.58e-25 102
MsG0580024370.01.T01 MTR_5g049190 41.322 121 68 2 8 128 13 130 4.02e-25 102
MsG0580024370.01.T01 MTR_6g027340 43.363 113 61 2 11 122 13 123 6.58e-25 100
MsG0580024370.01.T01 MTR_3g101290 48.182 110 54 2 8 115 29 137 9.05e-25 100
MsG0580024370.01.T01 MTR_5g082910 44.800 125 59 3 8 128 14 132 1.74e-24 101
MsG0580024370.01.T01 MTR_7g035350 45.614 114 57 3 12 125 224 332 2.17e-24 103
MsG0580024370.01.T01 MTR_7g061330 47.573 103 53 1 14 116 113 214 2.29e-24 103
MsG0580024370.01.T01 MTR_7g461410 47.573 103 53 1 14 116 113 214 2.29e-24 103
MsG0580024370.01.T01 MTR_4g105660 42.857 112 63 1 12 123 178 288 2.92e-24 102
MsG0580024370.01.T01 MTR_7g061330 47.573 103 53 1 14 116 77 178 3.86e-24 103
MsG0580024370.01.T01 MTR_3g077650 42.478 113 62 2 14 124 181 292 5.94e-24 102
MsG0580024370.01.T01 MTR_7g037260 31.863 204 114 6 12 194 143 342 8.13e-24 100
MsG0580024370.01.T01 MTR_3g110028 46.602 103 54 1 14 116 85 186 2.75e-23 101
MsG0580024370.01.T01 MTR_4g088015 42.609 115 60 2 12 121 219 332 4.63e-23 99.8
MsG0580024370.01.T01 MTR_3g089045 49.074 108 52 2 14 120 16 121 4.91e-23 97.4
MsG0580024370.01.T01 MTR_7g451170 45.361 97 52 1 14 110 191 286 6.92e-23 99.0
MsG0580024370.01.T01 MTR_1g026870 45.631 103 55 1 14 116 85 186 1.82e-22 99.0
MsG0580024370.01.T01 MTR_7g450950 43.299 97 54 1 14 110 157 252 1.26e-21 94.4
MsG0580024370.01.T01 MTR_6g027370 43.119 109 61 1 14 122 99 206 2.00e-21 94.0
MsG0580024370.01.T01 MTR_7g037130 28.856 201 124 4 12 194 143 342 5.64e-21 92.8
MsG0580024370.01.T01 MTR_5g010650 45.098 102 54 2 8 109 105 204 1.53e-20 92.4
MsG0580024370.01.T01 MTR_0023s0210 48.148 81 42 0 8 88 3 83 5.21e-20 83.6
MsG0580024370.01.T01 MTR_7g086960 41.026 117 63 2 1 117 81 191 2.31e-19 88.2
MsG0580024370.01.T01 MTR_7g061550 36.000 125 78 1 14 136 7 131 2.45e-19 88.2
MsG0580024370.01.T01 MTR_5g038910 34.862 109 70 1 17 125 29 136 4.56e-17 81.6
MsG0580024370.01.T01 MTR_5g038910 34.862 109 70 1 17 125 29 136 5.61e-17 82.0
MsG0580024370.01.T01 MTR_8g468380 35.398 113 70 2 17 127 25 136 2.65e-15 76.6
MsG0580024370.01.T01 MTR_6g055910 58.000 50 21 0 70 119 2 51 2.09e-13 68.9
MsG0580024370.01.T01 MTR_4g063100 60.870 46 18 0 70 115 1 46 4.16e-13 67.4
MsG0580024370.01.T01 MTR_2g096380 51.852 54 26 0 70 123 1 54 4.22e-12 64.3
MsG0580024370.01.T01 MTR_1g008970 45.833 72 39 0 35 106 111 182 1.14e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024370.01.T01 AT1G63910 50.418 359 124 11 1 316 1 348 3.35e-98 295
MsG0580024370.01.T01 AT3G13890 77.586 116 26 0 1 116 1 116 7.18e-67 214
MsG0580024370.01.T01 AT5G26660 58.182 165 59 3 1 164 1 156 8.65e-64 206
MsG0580024370.01.T01 AT3G13890 72.000 125 26 1 1 116 1 125 9.96e-64 206
MsG0580024370.01.T01 AT4G01680 73.504 117 31 0 1 117 1 117 1.17e-63 202
MsG0580024370.01.T01 AT1G09540 73.729 118 31 0 1 118 1 118 2.80e-63 205
MsG0580024370.01.T01 AT4G01680 73.504 117 31 0 1 117 1 117 4.86e-63 204
MsG0580024370.01.T01 AT1G57560 71.186 118 34 0 1 118 1 118 1.17e-61 199
MsG0580024370.01.T01 AT1G57560 71.186 118 34 0 1 118 1 118 2.38e-61 197
MsG0580024370.01.T01 AT3G12720 74.138 116 29 1 1 116 12 126 4.37e-61 197
MsG0580024370.01.T01 AT4G01680 66.667 129 31 1 1 117 1 129 1.52e-59 195
MsG0580024370.01.T01 AT5G12870 66.372 113 38 0 10 122 16 128 7.46e-55 181
MsG0580024370.01.T01 AT3G01140 64.407 118 42 0 1 118 1 118 2.81e-54 181
MsG0580024370.01.T01 AT3G08500 63.559 118 40 1 3 117 18 135 1.22e-53 179
MsG0580024370.01.T01 AT3G02940 63.793 116 42 0 1 116 1 116 1.52e-53 178
MsG0580024370.01.T01 AT4G05100 63.866 119 42 1 1 118 1 119 2.39e-53 178
MsG0580024370.01.T01 AT3G02940 63.793 116 42 0 1 116 1 116 3.88e-53 177
MsG0580024370.01.T01 AT3G02940 63.793 116 42 0 1 116 1 116 3.88e-53 177
MsG0580024370.01.T01 AT5G16770 52.121 165 73 3 1 160 1 164 6.54e-53 177
MsG0580024370.01.T01 AT5G16770 52.121 165 73 3 1 160 1 164 6.54e-53 177
MsG0580024370.01.T01 AT5G15310 62.712 118 44 0 1 118 1 118 7.16e-53 177
MsG0580024370.01.T01 AT5G15310 62.712 118 44 0 1 118 1 118 7.82e-53 174
MsG0580024370.01.T01 AT5G15310 62.712 118 44 0 1 118 1 118 1.04e-52 176
MsG0580024370.01.T01 AT5G16770 52.121 165 73 3 1 160 1 164 1.41e-52 177
MsG0580024370.01.T01 AT5G16770 52.121 165 73 3 1 160 1 164 1.41e-52 177
MsG0580024370.01.T01 AT5G60890 61.017 118 46 0 1 118 1 118 1.84e-52 175
MsG0580024370.01.T01 AT3G01140 65.487 113 39 0 6 118 49 161 2.60e-52 177
MsG0580024370.01.T01 AT4G28110 62.185 119 45 0 1 119 1 119 6.66e-52 173
MsG0580024370.01.T01 AT4G21440 54.483 145 59 2 1 145 1 138 8.63e-52 175
MsG0580024370.01.T01 AT4G34990 62.931 116 43 0 1 116 1 116 9.80e-52 172
MsG0580024370.01.T01 AT2G16720 61.207 116 45 0 1 116 1 116 1.69e-51 172
MsG0580024370.01.T01 AT4G17785 63.248 117 42 1 1 116 1 117 2.71e-51 174
MsG0580024370.01.T01 AT4G38620 61.207 116 45 0 1 116 1 116 3.14e-51 171
MsG0580024370.01.T01 AT4G17785 63.248 117 42 1 1 116 1 117 3.60e-51 174
MsG0580024370.01.T01 AT2G31180 40.741 216 116 2 1 204 1 216 7.64e-51 169
MsG0580024370.01.T01 AT5G65230 62.069 116 44 0 1 116 1 116 7.69e-51 171
MsG0580024370.01.T01 AT1G34670 60.345 116 46 0 1 116 1 116 1.58e-50 172
MsG0580024370.01.T01 AT4G09460 59.483 116 47 0 1 116 1 116 1.67e-50 168
MsG0580024370.01.T01 AT5G10280 58.621 116 48 0 1 116 1 116 1.89e-50 171
MsG0580024370.01.T01 AT3G61250 61.207 116 45 0 1 116 1 116 1.98e-50 170
MsG0580024370.01.T01 AT1G66230 61.864 118 45 0 1 118 1 118 2.47e-50 169
MsG0580024370.01.T01 AT1G22640 61.207 116 45 0 1 116 1 116 2.54e-50 168
MsG0580024370.01.T01 AT4G12350 43.000 200 91 2 1 200 1 177 3.38e-50 169
MsG0580024370.01.T01 AT1G06180 45.178 197 98 2 1 189 1 195 8.97e-50 167
MsG0580024370.01.T01 AT3G23250 55.906 127 56 0 1 127 1 127 9.66e-50 168
MsG0580024370.01.T01 AT5G54230 63.559 118 43 0 1 118 1 118 1.01e-49 169
MsG0580024370.01.T01 AT5G16600 61.017 118 46 0 1 118 1 118 2.01e-49 168
MsG0580024370.01.T01 AT1G18570 62.931 116 42 1 6 120 6 121 4.82e-49 168
MsG0580024370.01.T01 AT4G22680 60.169 118 47 0 1 118 1 118 7.36e-49 165
MsG0580024370.01.T01 AT1G79180 57.812 128 54 0 2 129 4 131 8.76e-49 166
MsG0580024370.01.T01 AT5G49330 62.069 116 44 0 1 116 1 116 1.10e-48 167
MsG0580024370.01.T01 AT5G61420 59.483 116 47 0 1 116 1 116 1.38e-48 167
MsG0580024370.01.T01 AT5G07690 61.404 114 44 0 1 114 1 114 2.08e-48 166
MsG0580024370.01.T01 AT2G47460 59.524 126 47 1 1 122 1 126 4.97e-48 166
MsG0580024370.01.T01 AT1G35515 58.621 116 48 0 1 116 1 116 6.41e-48 160
MsG0580024370.01.T01 AT1G08810 59.504 121 49 0 1 121 1 121 1.41e-47 162
MsG0580024370.01.T01 AT5G56110 59.483 116 47 0 1 116 1 116 1.71e-47 163
MsG0580024370.01.T01 AT5G07700 59.483 116 47 0 1 116 1 116 2.05e-47 163
MsG0580024370.01.T01 AT5G07700 59.483 116 47 0 1 116 1 116 2.05e-47 163
MsG0580024370.01.T01 AT5G23000 60.684 117 45 1 1 116 1 117 2.10e-47 163
MsG0580024370.01.T01 AT3G47600 59.016 122 50 0 1 122 1 122 2.55e-47 163
MsG0580024370.01.T01 AT2G36890 55.882 136 51 2 1 135 1 128 7.03e-47 160
MsG0580024370.01.T01 AT2G36890 55.882 136 51 2 1 135 42 169 9.76e-47 161
MsG0580024370.01.T01 AT3G62610 59.483 116 47 0 1 116 1 116 1.07e-46 161
MsG0580024370.01.T01 AT1G74430 55.833 120 53 0 1 120 1 120 1.45e-46 159
MsG0580024370.01.T01 AT5G14340 59.829 117 47 0 1 117 13 129 1.65e-46 159
MsG0580024370.01.T01 AT1G74650 61.207 116 45 0 1 116 1 116 2.43e-46 160
MsG0580024370.01.T01 AT1G56160 60.000 115 46 0 2 116 4 118 2.49e-46 159
MsG0580024370.01.T01 AT5G62470 58.537 123 51 0 1 123 1 123 3.20e-46 160
MsG0580024370.01.T01 AT3G27810 43.646 181 94 2 9 185 17 193 5.39e-46 156
MsG0580024370.01.T01 AT1G16490 57.480 127 50 1 2 128 4 126 5.57e-46 157
MsG0580024370.01.T01 AT1G74080 51.799 139 61 1 6 138 6 144 1.08e-45 159
MsG0580024370.01.T01 AT5G57620 58.120 117 48 1 1 116 1 117 1.09e-45 159
MsG0580024370.01.T01 AT3G49690 58.974 117 47 1 1 116 1 117 1.75e-45 157
MsG0580024370.01.T01 AT3G28470 57.273 110 47 0 1 110 1 110 2.90e-45 157
MsG0580024370.01.T01 AT3G28910 59.322 118 48 0 6 123 6 123 9.18e-45 156
MsG0580024370.01.T01 AT3G48920 57.798 109 46 0 8 116 14 122 1.09e-44 154
MsG0580024370.01.T01 AT1G18710 50.000 146 63 1 1 146 1 136 1.38e-44 154
MsG0580024370.01.T01 AT5G62470 58.537 123 50 1 1 123 1 122 1.97e-44 155
MsG0580024370.01.T01 AT5G52260 52.083 144 50 1 9 133 9 152 2.62e-44 153
MsG0580024370.01.T01 AT4G25560 60.714 112 44 0 10 121 8 119 2.82e-44 153
MsG0580024370.01.T01 AT5G65790 57.265 117 49 1 1 116 1 117 3.55e-44 155
MsG0580024370.01.T01 AT3G13540 57.658 111 47 0 6 116 17 127 4.40e-44 152
MsG0580024370.01.T01 AT5G35550 57.759 116 49 0 9 124 11 126 5.74e-44 152
MsG0580024370.01.T01 AT5G40350 55.556 126 54 1 11 134 16 141 6.86e-44 150
MsG0580024370.01.T01 AT5G62320 54.098 122 49 1 2 116 3 124 1.73e-43 150
MsG0580024370.01.T01 AT4G37780 56.410 117 50 1 1 116 1 117 1.94e-43 152
MsG0580024370.01.T01 AT3G12820 59.292 113 46 0 6 118 8 120 6.80e-43 149
MsG0580024370.01.T01 AT3G01530 53.600 125 51 1 12 136 25 142 7.06e-43 147
MsG0580024370.01.T01 AT5G14750 57.692 104 44 0 13 116 17 120 7.20e-43 147
MsG0580024370.01.T01 AT5G40330 56.481 108 47 0 9 116 9 116 8.02e-43 147
MsG0580024370.01.T01 AT5G52600 56.637 113 49 0 12 124 12 124 9.56e-43 147
MsG0580024370.01.T01 AT3G27920 54.386 114 52 0 10 123 12 125 3.03e-42 146
MsG0580024370.01.T01 AT1G79180 45.963 161 54 1 2 129 4 164 3.25e-42 149
MsG0580024370.01.T01 AT1G48000 49.315 146 71 2 11 154 31 175 3.03e-41 144
MsG0580024370.01.T01 AT2G32460 56.481 108 47 0 10 117 16 123 2.36e-40 148
MsG0580024370.01.T01 AT4G13480 51.220 123 60 0 13 135 7 129 2.37e-40 142
MsG0580024370.01.T01 AT4G26930 57.944 107 45 0 12 118 19 125 2.52e-40 146
MsG0580024370.01.T01 AT2G32460 56.481 108 47 0 10 117 4 111 2.72e-40 147
MsG0580024370.01.T01 AT5G06100 58.491 106 44 0 12 117 32 137 6.42e-40 146
MsG0580024370.01.T01 AT3G30210 39.720 214 109 5 13 216 28 231 1.36e-39 141
MsG0580024370.01.T01 AT1G68320 56.881 109 47 0 10 118 17 125 2.36e-39 140
MsG0580024370.01.T01 AT5G06100 58.491 106 44 0 12 117 32 137 2.65e-39 145
MsG0580024370.01.T01 AT5G06100 58.491 106 44 0 12 117 32 137 2.65e-39 145
MsG0580024370.01.T01 AT5G06100 58.491 106 44 0 12 117 32 137 2.65e-39 145
MsG0580024370.01.T01 AT5G06100 58.491 106 44 0 12 117 32 137 2.65e-39 145
MsG0580024370.01.T01 AT3G24310 56.757 111 48 0 13 123 19 129 3.52e-39 140
MsG0580024370.01.T01 AT5G55020 55.140 107 48 0 12 118 26 132 7.88e-39 144
MsG0580024370.01.T01 AT3G11440 55.660 106 47 0 12 117 41 146 2.57e-38 142
MsG0580024370.01.T01 AT2G47190 46.923 130 68 1 12 140 20 149 5.61e-38 137
MsG0580024370.01.T01 AT2G26960 42.384 151 73 1 9 145 17 167 6.04e-38 140
MsG0580024370.01.T01 AT3G11440 52.586 116 55 0 2 117 31 146 1.08e-37 142
MsG0580024370.01.T01 AT3G11440 52.586 116 55 0 2 117 31 146 1.08e-37 142
MsG0580024370.01.T01 AT3G11440 52.586 116 55 0 2 117 31 146 1.08e-37 142
MsG0580024370.01.T01 AT1G25340 45.455 143 73 2 13 154 19 157 3.43e-37 135
MsG0580024370.01.T01 AT5G26660 51.181 127 52 3 39 164 8 125 5.21e-37 135
MsG0580024370.01.T01 AT3G06490 57.658 111 47 0 8 118 15 125 6.79e-36 132
MsG0580024370.01.T01 AT3G27810 44.138 145 73 2 45 185 4 144 5.38e-34 123
MsG0580024370.01.T01 AT1G66370 45.113 133 63 1 10 132 6 138 7.25e-34 125
MsG0580024370.01.T01 AT5G59780 50.467 107 53 0 9 115 5 111 7.32e-34 125
MsG0580024370.01.T01 AT5G49620 58.491 106 44 0 9 114 23 128 9.96e-34 126
MsG0580024370.01.T01 AT3G53200 50.467 107 53 0 9 115 6 112 7.37e-33 122
MsG0580024370.01.T01 AT3G46130 50.485 103 51 0 13 115 10 112 1.34e-32 122
MsG0580024370.01.T01 AT1G25340 43.357 143 71 3 13 154 19 152 3.46e-32 121
MsG0580024370.01.T01 AT3G60460 47.321 112 58 1 7 117 6 117 3.76e-32 122
MsG0580024370.01.T01 AT1G25340 43.357 143 71 3 13 154 19 152 4.53e-32 122
MsG0580024370.01.T01 AT5G40350 59.783 92 35 1 45 134 5 96 5.75e-32 118
MsG0580024370.01.T01 AT1G66380 52.885 104 49 0 12 115 8 111 2.62e-31 115
MsG0580024370.01.T01 AT3G47600 55.556 99 40 1 24 122 22 116 3.93e-31 120
MsG0580024370.01.T01 AT5G35550 62.500 80 30 0 45 124 50 129 1.20e-30 117
MsG0580024370.01.T01 AT1G66390 51.887 106 51 0 10 115 6 111 1.44e-30 116
MsG0580024370.01.T01 AT1G56650 51.923 104 50 0 12 115 8 111 2.01e-30 116
MsG0580024370.01.T01 AT2G26950 45.370 108 56 1 17 124 21 125 2.80e-30 119
MsG0580024370.01.T01 AT5G49620 50.000 124 48 1 9 118 23 146 3.27e-30 117
MsG0580024370.01.T01 AT5G14750 63.768 69 25 0 48 116 18 86 1.06e-28 109
MsG0580024370.01.T01 AT3G12820 67.606 71 23 0 48 118 2 72 2.85e-28 108
MsG0580024370.01.T01 AT3G46130 62.500 72 27 0 44 115 9 80 1.04e-27 108
MsG0580024370.01.T01 AT5G59780 61.644 73 28 0 43 115 18 90 1.12e-27 108
MsG0580024370.01.T01 AT1G69560 47.154 123 60 3 3 122 94 214 1.50e-27 110
MsG0580024370.01.T01 AT3G46130 61.644 73 28 0 43 115 18 90 1.94e-27 108
MsG0580024370.01.T01 AT1G69560 47.154 123 60 3 3 122 110 230 2.13e-27 110
MsG0580024370.01.T01 AT3G27785 42.241 116 66 1 12 127 187 301 6.28e-26 107
MsG0580024370.01.T01 AT5G58850 46.078 102 54 1 14 115 105 205 8.21e-26 107
MsG0580024370.01.T01 AT5G11050 36.943 157 92 3 10 160 101 256 1.40e-25 106
MsG0580024370.01.T01 AT1G26780 47.321 112 56 2 12 122 96 205 2.13e-25 103
MsG0580024370.01.T01 AT3G53200 58.904 73 30 0 43 115 7 79 2.24e-25 101
MsG0580024370.01.T01 AT1G26780 47.321 112 56 2 12 122 96 205 2.92e-25 104
MsG0580024370.01.T01 AT5G40360 32.086 187 117 5 12 195 156 335 3.64e-25 104
MsG0580024370.01.T01 AT1G17950 45.045 111 60 1 14 124 5 114 1.07e-24 100
MsG0580024370.01.T01 AT3G50060 48.039 102 52 1 14 115 6 106 1.37e-24 102
MsG0580024370.01.T01 AT4G37260 49.074 108 53 2 8 115 8 113 2.15e-24 101
MsG0580024370.01.T01 AT4G18770 42.241 116 64 2 14 127 217 331 2.29e-24 103
MsG0580024370.01.T01 AT2G39880 48.598 107 53 2 9 115 46 150 2.87e-24 102
MsG0580024370.01.T01 AT5G02320 48.544 103 52 1 14 116 127 228 3.67e-24 103
MsG0580024370.01.T01 AT5G02320 48.544 103 52 1 14 116 127 228 3.67e-24 103
MsG0580024370.01.T01 AT5G02320 48.544 103 52 1 14 116 67 168 4.34e-24 102
MsG0580024370.01.T01 AT5G67300 48.039 102 52 1 14 115 6 106 6.70e-24 100
MsG0580024370.01.T01 AT2G23290 50.980 102 49 1 14 115 13 113 8.06e-24 99.8
MsG0580024370.01.T01 AT3G55730 49.533 107 52 2 9 115 52 156 9.72e-24 101
MsG0580024370.01.T01 AT3G29020 42.202 109 62 1 14 122 65 172 2.94e-23 96.7
MsG0580024370.01.T01 AT3G29020 42.202 109 62 1 14 122 67 174 4.09e-23 97.8
MsG0580024370.01.T01 AT3G09370 48.039 102 52 1 14 115 130 230 4.77e-23 100
MsG0580024370.01.T01 AT3G09370 48.039 102 52 1 14 115 135 235 4.78e-23 100
MsG0580024370.01.T01 AT3G09370 48.039 102 52 1 14 115 143 243 5.97e-23 99.8
MsG0580024370.01.T01 AT4G33450 38.686 137 80 2 13 149 18 150 6.32e-23 96.3
MsG0580024370.01.T01 AT3G09230 46.602 103 54 1 14 116 55 156 6.63e-23 98.6
MsG0580024370.01.T01 AT1G66380 59.155 71 29 0 45 115 8 78 6.78e-23 92.0
MsG0580024370.01.T01 AT5G11510 37.931 145 82 3 14 158 81 217 1.74e-22 99.0
MsG0580024370.01.T01 AT5G11510 37.931 145 82 3 14 158 81 217 1.74e-22 99.0
MsG0580024370.01.T01 AT5G11510 37.931 145 82 3 14 158 81 217 1.74e-22 99.0
MsG0580024370.01.T01 AT5G11510 37.931 145 82 3 14 158 81 217 1.83e-22 99.0
MsG0580024370.01.T01 AT5G11510 37.931 145 82 3 14 158 81 217 1.87e-22 99.0
MsG0580024370.01.T01 AT1G22640 66.102 59 20 0 58 116 1 59 3.11e-22 93.2
MsG0580024370.01.T01 AT1G73410 45.794 107 57 1 14 120 6 111 3.38e-22 94.0
MsG0580024370.01.T01 AT3G23250 57.143 70 30 0 58 127 1 70 4.22e-22 93.6
MsG0580024370.01.T01 AT5G17800 41.176 119 69 1 1 119 80 197 4.66e-22 95.1
MsG0580024370.01.T01 AT1G73410 45.794 107 57 1 14 120 6 111 9.53e-22 91.7
MsG0580024370.01.T01 AT4G32730 44.660 103 56 1 14 116 87 188 1.72e-21 96.3
MsG0580024370.01.T01 AT4G32730 44.660 103 56 1 14 116 87 188 1.72e-21 96.3
MsG0580024370.01.T01 AT4G32730 44.660 103 56 1 14 116 87 188 1.72e-21 96.3
MsG0580024370.01.T01 AT4G32730 44.660 103 56 1 14 116 87 188 1.72e-21 96.3
MsG0580024370.01.T01 AT4G32730 44.660 103 56 1 14 116 87 188 1.95e-21 95.9
MsG0580024370.01.T01 AT1G18960 43.137 102 51 4 17 116 13 109 2.84e-21 92.8
MsG0580024370.01.T01 AT5G14750 57.627 59 25 0 58 116 1 59 8.17e-20 84.7
MsG0580024370.01.T01 AT5G14750 57.627 59 25 0 58 116 1 59 8.17e-20 84.7
MsG0580024370.01.T01 AT1G66380 41.584 101 58 1 8 107 4 104 1.12e-19 83.6
MsG0580024370.01.T01 AT2G25230 37.615 109 66 2 17 125 29 135 1.36e-19 86.7
MsG0580024370.01.T01 AT1G71030 48.529 68 35 0 51 118 5 72 2.55e-19 84.7
MsG0580024370.01.T01 AT1G71030 48.529 68 35 0 51 118 19 86 3.40e-19 84.7
MsG0580024370.01.T01 AT2G02820 36.697 109 68 1 17 125 33 140 7.44e-19 86.3
MsG0580024370.01.T01 AT2G02820 36.697 109 68 1 17 125 33 140 8.29e-19 87.4
MsG0580024370.01.T01 AT2G02820 36.697 109 68 1 17 125 33 140 1.40e-18 86.7
MsG0580024370.01.T01 AT5G39700 38.596 114 69 1 9 122 51 163 4.59e-18 81.3
MsG0580024370.01.T01 AT2G37630 36.434 129 78 2 14 140 4 130 5.22e-18 84.3
MsG0580024370.01.T01 AT1G14350 40.594 101 59 1 17 117 28 127 9.48e-18 84.0
MsG0580024370.01.T01 AT1G14350 40.594 101 59 1 17 117 28 127 9.48e-18 84.0
MsG0580024370.01.T01 AT4G00540 40.741 108 60 2 12 116 101 207 3.81e-17 82.0
MsG0580024370.01.T01 AT4G00540 40.741 108 60 2 12 116 99 205 7.38e-17 81.6
MsG0580024370.01.T01 AT5G40430 32.456 114 74 3 12 125 52 162 5.18e-15 74.3
MsG0580024370.01.T01 AT5G59780 57.143 49 21 0 70 118 1 49 2.62e-13 67.8
MsG0580024370.01.T01 AT3G46130 57.143 49 21 0 70 118 1 49 4.64e-13 67.4
MsG0580024370.01.T01 AT4G25560 58.824 51 21 0 71 121 3 53 7.98e-13 67.4
MsG0580024370.01.T01 AT3G28910 61.905 42 16 0 77 118 1 42 2.01e-11 63.9
MsG0580024370.01.T01 AT1G14350 43.548 62 35 0 56 117 23 84 2.67e-11 64.7
MsG0580024370.01.T01 AT1G14350 43.548 62 35 0 56 117 23 84 2.67e-11 64.7
MsG0580024370.01.T01 AT1G74650 65.000 40 14 0 77 116 1 40 2.96e-11 63.2

Find 68 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATGGATAAATTATTTA+AGG 0.191741 5:-3954309 MsG0580024370.01.T01:CDS
GTAATTATCTAGTTGATTAA+TGG 0.205543 5:+3953522 None:intergenic
AGGACATGTTGATGAAAATA+AGG 0.261958 5:+3953465 None:intergenic
ATAGTTGGTGTTGATAAATT+AGG 0.292324 5:+3953583 None:intergenic
CTACTCATGGTTATGGTTGC+TGG 0.308659 5:-3954492 MsG0580024370.01.T01:CDS
ATGAGTTTCTCATCTTCTTC+AGG 0.319747 5:+3954526 None:intergenic
ATCTTCTTAGTGAATGAATT+AGG 0.323703 5:+3952974 None:intergenic
TCAAGTGCAATCTTGTAATA+TGG 0.345859 5:-3953173 MsG0580024370.01.T01:CDS
AACCTTCCTCTTCTAATATC+AGG 0.359507 5:+3954286 None:intergenic
TCATGATGGAATAGTACTTC+TGG 0.366082 5:+3953379 None:intergenic
TACATTACTACTCATGGTTA+TGG 0.370666 5:-3954499 MsG0580024370.01.T01:CDS
TTCATGGGGTTGTTGGCAAC+AGG 0.386838 5:-3954231 MsG0580024370.01.T01:intron
GTAGCAAGCTCTTCCTAGTT+AGG 0.390166 5:+3952928 None:intergenic
AAGTTAATTATAAGCCTTCA+TGG 0.404335 5:-3954247 MsG0580024370.01.T01:CDS
GGTACCAAACTCATCACATA+TGG 0.406647 5:-3953002 MsG0580024370.01.T01:CDS
TCCACATTATTCTCTATCAA+TGG 0.410595 5:+3953217 None:intergenic
GGAGAGTGTTGAAGGACAAA+TGG 0.424251 5:-3953044 MsG0580024370.01.T01:CDS
ATAATTAACTTCTCCTCCTC+AGG 0.429297 5:+3954259 None:intergenic
ATAAGCCTTCATGGGGTTGT+TGG 0.433560 5:-3954238 MsG0580024370.01.T01:CDS
AGGAGGAGAGTTATTAACAT+TGG 0.435772 5:-3953143 MsG0580024370.01.T01:CDS
TTCAGCTGGGAGAGTGTTGA+AGG 0.456330 5:-3953052 MsG0580024370.01.T01:CDS
GACAAGAAGAGTTGAATGAA+TGG 0.469944 5:-3953108 MsG0580024370.01.T01:CDS
CTTGTGTCAAACATAAATAA+AGG 0.479629 5:+3953445 None:intergenic
AAGTGCAGACCAGCTTTCTC+AGG 0.484684 5:+3954460 None:intergenic
GTTCCCATATGTGATGAGTT+TGG 0.488784 5:+3952998 None:intergenic
CACATTGCAAGCCACTTGCC+TGG 0.495527 5:-3953682 MsG0580024370.01.T01:CDS
TCTGTTGATTGCAGCATGAA+TGG 0.499140 5:+3954572 None:intergenic
AGTTAATTATAAGCCTTCAT+GGG 0.499739 5:-3954246 MsG0580024370.01.T01:CDS
TACTTCTGGTCTTATTACAT+TGG 0.506573 5:+3953393 None:intergenic
ATTTCATTGTCTGTTCTACC+AGG 0.510091 5:+3953664 None:intergenic
AAAGCTATTGCAGCTGGATG+AGG 0.510638 5:+3953277 None:intergenic
ATTAGATACATTACTACTCA+TGG 0.516384 5:-3954505 MsG0580024370.01.T01:CDS
GGGAGGTGAAGAACAAGTAC+TGG 0.518630 5:-3953023 MsG0580024370.01.T01:CDS
AGAAGGTTAAGAGAGGCCTT+TGG 0.525448 5:-3954552 MsG0580024370.01.T01:CDS
GTTGTAAAAGCTATTGCAGC+TGG 0.529157 5:+3953271 None:intergenic
ACAAGAAGAGTTGAATGAAT+GGG 0.537109 5:-3953107 MsG0580024370.01.T01:CDS
GTAATAACTAGAGAGAAAGA+TGG 0.543659 5:-3954599 MsG0580024370.01.T01:exon
GAGAGTGTTGAAGGACAAAT+GGG 0.544217 5:-3953043 MsG0580024370.01.T01:CDS
GCTATTGCAGCTGGATGAGG+AGG 0.549719 5:+3953280 None:intergenic
TTAATTATATCTACCTAACT+AGG 0.549785 5:-3952941 MsG0580024370.01.T01:three_prime_UTR
CATCTTCTTCAGGTGACCAA+AGG 0.550800 5:+3954536 None:intergenic
ACATTATTCTCTATCAATGG+TGG 0.555492 5:+3953220 None:intergenic
GCAATCTTGTAATATGGATG+AGG 0.555592 5:-3953167 MsG0580024370.01.T01:CDS
AGTGAAGTTCCTGAGAAAGC+TGG 0.559248 5:-3954469 MsG0580024370.01.T01:intron
TAATAACTAGAGAGAAAGAT+GGG 0.568512 5:-3954598 MsG0580024370.01.T01:exon
TTAAACTCACAGAATCATGA+TGG 0.568777 5:+3953365 None:intergenic
TGTAATATGGATGAGGAAGG+AGG 0.573816 5:-3953160 MsG0580024370.01.T01:CDS
TGTCTGTTCTACCAGGCAAG+TGG 0.576295 5:+3953671 None:intergenic
GTACCAAACTCATCACATAT+GGG 0.577270 5:-3953001 MsG0580024370.01.T01:CDS
GTTAATTATAAGCCTTCATG+GGG 0.585238 5:-3954245 MsG0580024370.01.T01:CDS
AAGAGGAAGGTTTACACCTG+AGG 0.591737 5:-3954275 MsG0580024370.01.T01:CDS
GATGATGTTGATGATGATCA+TGG 0.594936 5:+3953317 None:intergenic
GTAAGAGTTGTAGATTGAGA+TGG 0.595760 5:-3954324 MsG0580024370.01.T01:CDS
TGATGATGATGATCAATAGT+TGG 0.596624 5:+3953568 None:intergenic
TTAAGGCCTGATATTAGAAG+AGG 0.608039 5:-3954292 MsG0580024370.01.T01:CDS
TGAGTTTAAGTTCTGACACA+TGG 0.610610 5:-3953351 MsG0580024370.01.T01:CDS
TGTTGCCAACAACCCCATGA+AGG 0.617109 5:+3954233 None:intergenic
TCCCAGCTGAAAATAAAGCT+AGG 0.619685 5:+3953064 None:intergenic
TCTTGTAATATGGATGAGGA+AGG 0.621073 5:-3953163 MsG0580024370.01.T01:CDS
AGGAAGGTTTACACCTGAGG+AGG 0.624953 5:-3954272 MsG0580024370.01.T01:CDS
AGAAGAGTTGAATGAATGGG+TGG 0.627654 5:-3953104 MsG0580024370.01.T01:CDS
ACCATTGATAGAGAATAATG+TGG 0.633578 5:-3953218 MsG0580024370.01.T01:CDS
GAATAATGTGGAAAACAGCA+TGG 0.636117 5:-3953206 MsG0580024370.01.T01:CDS
TTCATGCTGCAATCAACAGA+AGG 0.642237 5:-3954569 MsG0580024370.01.T01:CDS
GGCCTGATATTAGAAGAGGA+AGG 0.643800 5:-3954288 MsG0580024370.01.T01:CDS
AGTGTTGAAGGACAAATGGG+AGG 0.655479 5:-3953040 MsG0580024370.01.T01:CDS
GAACTGTAATTGATCAACTG+AGG 0.702739 5:+3953544 None:intergenic
AATCAACAGAAGGTTAAGAG+AGG 0.703939 5:-3954559 MsG0580024370.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATGAAATAAAAAACTAT+TGG - Chr5:3953949-3953968 MsG0580024370.01.T01:intron 15.0%
!!! TCTATATATTTTGTTTTTCA+GGG - Chr5:3953240-3953259 MsG0580024370.01.T01:CDS 15.0%
!!! TTCTATATATTTTGTTTTTC+AGG - Chr5:3953239-3953258 MsG0580024370.01.T01:CDS 15.0%
!! AAATGTATGCTTATAAATCA+CGG - Chr5:3953806-3953825 MsG0580024370.01.T01:intron 20.0%
!! AATGATTCAAATTGCTTAAT+TGG + Chr5:3953427-3953446 None:intergenic 20.0%
!! ATCAATATTAGGTAAAGAAA+TGG - Chr5:3953522-3953541 MsG0580024370.01.T01:CDS 20.0%
!! ATTTATTAATGAAGCAATCT+TGG - Chr5:3953630-3953649 MsG0580024370.01.T01:CDS 20.0%
!! ATTTATTCCAGATTTATCAA+AGG + Chr5:3953489-3953508 None:intergenic 20.0%
!! GTAATTATCTAGTTGATTAA+TGG + Chr5:3954081-3954100 None:intergenic 20.0%
!! TAAAAAACTATTGGAATTCA+TGG - Chr5:3953958-3953977 MsG0580024370.01.T01:intron 20.0%
!! TGAGATGGATAAATTATTTA+AGG - Chr5:3953291-3953310 MsG0580024370.01.T01:CDS 20.0%
!! TTAATTATATCTACCTAACT+AGG - Chr5:3954659-3954678 MsG0580024370.01.T01:five_prime_UTR 20.0%
!! TTTATTCCAGATTTATCAAA+GGG + Chr5:3953488-3953507 None:intergenic 20.0%
!!! AAAAGCATCATATCAATATT+AGG - Chr5:3953511-3953530 MsG0580024370.01.T01:CDS 20.0%
! AAAATCCATATTACACAACA+AGG + Chr5:3953451-3953470 None:intergenic 25.0%
! AAATCCATATTACACAACAA+GGG + Chr5:3953450-3953469 None:intergenic 25.0%
! AAGTTAATTATAAGCCTTCA+TGG - Chr5:3953353-3953372 MsG0580024370.01.T01:CDS 25.0%
! AGTTAATTATAAGCCTTCAT+GGG - Chr5:3953354-3953373 MsG0580024370.01.T01:CDS 25.0%
! ATCTTCTTAGTGAATGAATT+AGG + Chr5:3954629-3954648 None:intergenic 25.0%
! ATTAGATACATTACTACTCA+TGG - Chr5:3953095-3953114 MsG0580024370.01.T01:CDS 25.0%
! CATATATATACAATGCAGAT+GGG - Chr5:3953893-3953912 MsG0580024370.01.T01:intron 25.0%
! CTTGTGTCAAACATAAATAA+AGG + Chr5:3954158-3954177 None:intergenic 25.0%
! TAATAACTAGAGAGAAAGAT+GGG - Chr5:3953002-3953021 MsG0580024370.01.T01:CDS 25.0%
! TATATTTGTGAATAGTAGCT+AGG - Chr5:3953553-3953572 MsG0580024370.01.T01:CDS 25.0%
! TCATATATATACAATGCAGA+TGG - Chr5:3953892-3953911 MsG0580024370.01.T01:intron 25.0%
! TTTACTAAAGAAAAAGAGAC+AGG - Chr5:3952959-3952978 MsG0580024370.01.T01:exon 25.0%
!! AAACATGACTAGAATTTTGT+TGG + Chr5:3953780-3953799 None:intergenic 25.0%
!! TGTTGTGTAATATGGATTTT+TGG - Chr5:3953451-3953470 MsG0580024370.01.T01:CDS 25.0%
!!! AATTTTGTTGGTTGTGAAAA+AGG + Chr5:3953768-3953787 None:intergenic 25.0%
!!! ATAGTTGGTGTTGATAAATT+AGG + Chr5:3954020-3954039 None:intergenic 25.0%
!!! CTTTTGTTGTTACATTTTCT+TGG + Chr5:3954112-3954131 None:intergenic 25.0%
ACAAGAAGAGTTGAATGAAT+GGG - Chr5:3954493-3954512 MsG0580024370.01.T01:CDS 30.0%
ACATTATTCTCTATCAATGG+TGG + Chr5:3954383-3954402 None:intergenic 30.0%
ACCATTGATAGAGAATAATG+TGG - Chr5:3954382-3954401 MsG0580024370.01.T01:intron 30.0%
ATGAAACCCTTTGATAAATC+TGG - Chr5:3953479-3953498 MsG0580024370.01.T01:CDS 30.0%
GTAATAACTAGAGAGAAAGA+TGG - Chr5:3953001-3953020 MsG0580024370.01.T01:CDS 30.0%
GTTAATTATAAGCCTTCATG+GGG - Chr5:3953355-3953374 MsG0580024370.01.T01:CDS 30.0%
TACATTACTACTCATGGTTA+TGG - Chr5:3953101-3953120 MsG0580024370.01.T01:CDS 30.0%
TCAAGTGCAATCTTGTAATA+TGG - Chr5:3954427-3954446 MsG0580024370.01.T01:intron 30.0%
TCCACATTATTCTCTATCAA+TGG + Chr5:3954386-3954405 None:intergenic 30.0%
TGCTAAACAAACACTGAAAA+CGG + Chr5:3953740-3953759 None:intergenic 30.0%
TTAAACTCACAGAATCATGA+TGG + Chr5:3954238-3954257 None:intergenic 30.0%
! AACCTCCTAACTATAGTTTT+GGG - Chr5:3953672-3953691 MsG0580024370.01.T01:CDS 30.0%
! AGGACATGTTGATGAAAATA+AGG + Chr5:3954138-3954157 None:intergenic 30.0%
! TGATGATGATGATCAATAGT+TGG + Chr5:3954035-3954054 None:intergenic 30.0%
! TGTTGTTACATTTTCTTGGT+TGG + Chr5:3954108-3954127 None:intergenic 30.0%
!! TACTTCTGGTCTTATTACAT+TGG + Chr5:3954210-3954229 None:intergenic 30.0%
AACCTTCCTCTTCTAATATC+AGG + Chr5:3953317-3953336 None:intergenic 35.0%
AATCAACAGAAGGTTAAGAG+AGG - Chr5:3953041-3953060 MsG0580024370.01.T01:CDS 35.0%
ACTTCCCCAAAACTATAGTT+AGG + Chr5:3953680-3953699 None:intergenic 35.0%
AGGAGGAGAGTTATTAACAT+TGG - Chr5:3954457-3954476 MsG0580024370.01.T01:intron 35.0%
ATAATTAACTTCTCCTCCTC+AGG + Chr5:3953344-3953363 None:intergenic 35.0%
ATGAGTTTCTCATCTTCTTC+AGG + Chr5:3953077-3953096 None:intergenic 35.0%
ATTTCATTGTCTGTTCTACC+AGG + Chr5:3953939-3953958 None:intergenic 35.0%
GAACTGTAATTGATCAACTG+AGG + Chr5:3954059-3954078 None:intergenic 35.0%
GAATAATGTGGAAAACAGCA+TGG - Chr5:3954394-3954413 MsG0580024370.01.T01:intron 35.0%
GACAAGAAGAGTTGAATGAA+TGG - Chr5:3954492-3954511 MsG0580024370.01.T01:CDS 35.0%
GCAATCTTGTAATATGGATG+AGG - Chr5:3954433-3954452 MsG0580024370.01.T01:intron 35.0%
GTAAGAGTTGTAGATTGAGA+TGG - Chr5:3953276-3953295 MsG0580024370.01.T01:CDS 35.0%
GTACCAAACTCATCACATAT+GGG - Chr5:3954599-3954618 MsG0580024370.01.T01:exon 35.0%
TCTTGTAATATGGATGAGGA+AGG - Chr5:3954437-3954456 MsG0580024370.01.T01:intron 35.0%
TTAAGGCCTGATATTAGAAG+AGG - Chr5:3953308-3953327 MsG0580024370.01.T01:CDS 35.0%
TTGAGCTATATCATGTAGCT+AGG + Chr5:3953579-3953598 None:intergenic 35.0%
! CAACCTCCTAACTATAGTTT+TGG - Chr5:3953671-3953690 MsG0580024370.01.T01:CDS 35.0%
! CATTCCCTTGTTGTGTAATA+TGG - Chr5:3953443-3953462 MsG0580024370.01.T01:CDS 35.0%
! TCATGATGGAATAGTACTTC+TGG + Chr5:3954224-3954243 None:intergenic 35.0%
! TGAGTTTAAGTTCTGACACA+TGG - Chr5:3954249-3954268 MsG0580024370.01.T01:CDS 35.0%
!! ACCTCCTAACTATAGTTTTG+GGG - Chr5:3953673-3953692 MsG0580024370.01.T01:CDS 35.0%
!! GATGATGTTGATGATGATCA+TGG + Chr5:3954286-3954305 None:intergenic 35.0%
!!! TAGTTTTGGGGAAGTTAAGA+TGG - Chr5:3953685-3953704 MsG0580024370.01.T01:CDS 35.0%
!!! TCCTAGCTTTATTTTCAGCT+GGG - Chr5:3954535-3954554 MsG0580024370.01.T01:CDS 35.0%
!!! TTTGTTTTTCAGGGCTTCAA+AGG - Chr5:3953249-3953268 MsG0580024370.01.T01:CDS 35.0%
AGAAGAGTTGAATGAATGGG+TGG - Chr5:3954496-3954515 MsG0580024370.01.T01:CDS 40.0%
AGCAATCTTGGTATCTCTGA+AGG - Chr5:3953642-3953661 MsG0580024370.01.T01:CDS 40.0%
GGTACCAAACTCATCACATA+TGG - Chr5:3954598-3954617 MsG0580024370.01.T01:exon 40.0%
GTTCCCATATGTGATGAGTT+TGG + Chr5:3954605-3954624 None:intergenic 40.0%
GTTGTAAAAGCTATTGCAGC+TGG + Chr5:3954332-3954351 None:intergenic 40.0%
TCCCAGCTGAAAATAAAGCT+AGG + Chr5:3954539-3954558 None:intergenic 40.0%
TCCCCAAAACTATAGTTAGG+AGG + Chr5:3953677-3953696 None:intergenic 40.0%
TGTAATATGGATGAGGAAGG+AGG - Chr5:3954440-3954459 MsG0580024370.01.T01:intron 40.0%
TTCATGCTGCAATCAACAGA+AGG - Chr5:3953031-3953050 MsG0580024370.01.T01:CDS 40.0%
! TCTGTTGATTGCAGCATGAA+TGG + Chr5:3953031-3953050 None:intergenic 40.0%
!! GAGAGTGTTGAAGGACAAAT+GGG - Chr5:3954557-3954576 MsG0580024370.01.T01:CDS 40.0%
!!! GTCCTAGCTTTATTTTCAGC+TGG - Chr5:3954534-3954553 MsG0580024370.01.T01:CDS 40.0%
AAAGCTATTGCAGCTGGATG+AGG + Chr5:3954326-3954345 None:intergenic 45.0%
AAGAGGAAGGTTTACACCTG+AGG - Chr5:3953325-3953344 MsG0580024370.01.T01:CDS 45.0%
AGAAGGTTAAGAGAGGCCTT+TGG - Chr5:3953048-3953067 MsG0580024370.01.T01:CDS 45.0%
AGTGAAGTTCCTGAGAAAGC+TGG - Chr5:3953131-3953150 MsG0580024370.01.T01:CDS 45.0%
ATAAGCCTTCATGGGGTTGT+TGG - Chr5:3953362-3953381 MsG0580024370.01.T01:CDS 45.0%
CATCTTCTTCAGGTGACCAA+AGG + Chr5:3953067-3953086 None:intergenic 45.0%
CTACTCATGGTTATGGTTGC+TGG - Chr5:3953108-3953127 MsG0580024370.01.T01:CDS 45.0%
GGCCTGATATTAGAAGAGGA+AGG - Chr5:3953312-3953331 MsG0580024370.01.T01:CDS 45.0%
GTAGCAAGCTCTTCCTAGTT+AGG + Chr5:3954675-3954694 None:intergenic 45.0%
! AGTGTTGAAGGACAAATGGG+AGG - Chr5:3954560-3954579 MsG0580024370.01.T01:CDS 45.0%
!! GGAGAGTGTTGAAGGACAAA+TGG - Chr5:3954556-3954575 MsG0580024370.01.T01:CDS 45.0%
!! TTTTCAGGGCTTCAAAGGTG+TGG - Chr5:3953254-3953273 MsG0580024370.01.T01:CDS 45.0%
AAGTGCAGACCAGCTTTCTC+AGG + Chr5:3953143-3953162 None:intergenic 50.0%
AGGAAGGTTTACACCTGAGG+AGG - Chr5:3953328-3953347 MsG0580024370.01.T01:CDS 50.0%
GGGAGGTGAAGAACAAGTAC+TGG - Chr5:3954577-3954596 MsG0580024370.01.T01:CDS 50.0%
TGTCTGTTCTACCAGGCAAG+TGG + Chr5:3953932-3953951 None:intergenic 50.0%
TGTTGCCAACAACCCCATGA+AGG + Chr5:3953370-3953389 None:intergenic 50.0%
TTCATGGGGTTGTTGGCAAC+AGG - Chr5:3953369-3953388 MsG0580024370.01.T01:CDS 50.0%
!! TTCAGCTGGGAGAGTGTTGA+AGG - Chr5:3954548-3954567 MsG0580024370.01.T01:CDS 50.0%
CACATTGCAAGCCACTTGCC+TGG - Chr5:3953918-3953937 MsG0580024370.01.T01:intron 55.0%
GCTATTGCAGCTGGATGAGG+AGG + Chr5:3954323-3954342 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 3952905 3954717 3952905 ID=MsG0580024370.01;Name=MsG0580024370.01
Chr5 mRNA 3952905 3954717 3952905 ID=MsG0580024370.01.T01;Parent=MsG0580024370.01;Name=MsG0580024370.01.T01;_AED=0.24;_eAED=0.24;_QI=115|1|1|1|1|1|3|59|336
Chr5 exon 3952905 3953711 3952905 ID=MsG0580024370.01.T01:exon:1297;Parent=MsG0580024370.01.T01
Chr5 exon 3954232 3954361 3954232 ID=MsG0580024370.01.T01:exon:1296;Parent=MsG0580024370.01.T01
Chr5 exon 3954470 3954717 3954470 ID=MsG0580024370.01.T01:exon:1295;Parent=MsG0580024370.01.T01
Chr5 five_prime_UTR 3954603 3954717 3954603 ID=MsG0580024370.01.T01:five_prime_utr;Parent=MsG0580024370.01.T01
Chr5 CDS 3954470 3954602 3954470 ID=MsG0580024370.01.T01:cds;Parent=MsG0580024370.01.T01
Chr5 CDS 3954232 3954361 3954232 ID=MsG0580024370.01.T01:cds;Parent=MsG0580024370.01.T01
Chr5 CDS 3952964 3953711 3952964 ID=MsG0580024370.01.T01:cds;Parent=MsG0580024370.01.T01
Chr5 three_prime_UTR 3952905 3952963 3952905 ID=MsG0580024370.01.T01:three_prime_utr;Parent=MsG0580024370.01.T01
Gene Sequence

>MsG0580024370.01.T01

ATGGGTCACCATTCATGCTGCAATCAACAGAAGGTTAAGAGAGGCCTTTGGTCACCTGAAGAAGATGAGAAACTCATTAGATACATTACTACTCATGGTTATGGTTGCTGGAGTGAAGTTCCTGAGAAAGCTGGGCTTCAAAGGTGTGGTAAGAGTTGTAGATTGAGATGGATAAATTATTTAAGGCCTGATATTAGAAGAGGAAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGCCTTCATGGGGTTGTTGGCAACAGATGGGCTCACATTGCAAGCCACTTGCCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCATGGATCAAAAAGAAAATTAGAAAGTCTTCTTCTTCTTCTCCTAATTTATCAACACCAACTATTGATCATCATCATCATCCTCAGTTGATCAATTACAGTTCCATTAATCAACTAGATAATTACTTTACCAACCAAGAAAATGTAACAACAAAAGAAACCTTATTTTCATCAACATGTCCTTTATTTATGTTTGACACAAGTTCACTACATGAAACAACAGCAACAGACACCAATGTAATAAGACCAGAAGTACTATTCCATCATGATTCTGTGAGTTTAAGTTCTGACACATGGAACTTGAATCACCATGATCATCATCAACATCATCAAGTTCAGACACTTCCTCCTCATCCAGCTGCAATAGCTTTTACAACAATTCATGATACTAGTAATTATAATCTTCCACCATTGATAGAGAATAATGTGGAAAACAGCATGGTGCAAATTGATCAAGTGCAATCTTGTAATATGGATGAGGAAGGAGGAGAGTTATTAACATTGGAGTCATTGCAAAGACAAGAAGAGTTGAATGAATGGGTGGAAACTCAACAACAGTGTCCTAGCTTTATTTTCAGCTGGGAGAGTGTTGAAGGACAAATGGGAGGTGAAGAACAAGTACTGGTACCAAACTCATCACATATGGGAACACCTAATTCATTCACTAAGAAGATTTTCTTCTGA

Protein sequence

>MsG0580024370.01.T01

MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSSSPNLSTPTIDHHHHPQLINYSSINQLDNYFTNQENVTTKETLFSSTCPLFMFDTSSLHETTATDTNVIRPEVLFHHDSVSLSSDTWNLNHHDHHQHHQVQTLPPHPAAIAFTTIHDTSNYNLPPLIENNVENSMVQIDQVQSCNMDEEGGELLTLESLQRQEELNEWVETQQQCPSFIFSWESVEGQMGGEEQVLVPNSSHMGTPNSFTKKIFF*