AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018362.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018362.01.T01 MTR_4g010650 98.886 808 9 0 1 808 1 808 0.0 1666
MsG0480018362.01.T01 MTR_2g103730 85.290 809 118 1 1 808 1 809 0.0 1454
MsG0480018362.01.T01 MTR_3g107360 64.286 826 264 10 6 808 5 822 0.0 1082
MsG0480018362.01.T01 MTR_3g107320 63.101 832 268 10 6 808 5 826 0.0 1065
MsG0480018362.01.T01 MTR_7g075910 46.303 825 389 17 6 796 299 1103 0.0 726
MsG0480018362.01.T01 MTR_8g033080 47.296 795 381 15 26 796 258 1038 0.0 721
MsG0480018362.01.T01 MTR_5g011050 47.464 769 367 14 50 796 90 843 0.0 717
MsG0480018362.01.T01 MTR_5g011060 45.299 819 401 17 6 796 38 837 0.0 710
MsG0480018362.01.T01 MTR_8g088690 47.722 790 363 16 50 808 72 842 0.0 707
MsG0480018362.01.T01 MTR_5g023050 45.963 805 371 14 50 808 86 872 0.0 706
MsG0480018362.01.T01 MTR_3g114840 46.926 797 367 19 50 808 73 851 0.0 695
MsG0480018362.01.T01 MTR_2g100250 42.222 810 403 19 6 808 5 756 0.0 613
MsG0480018362.01.T01 MTR_3g114840 45.924 736 334 19 50 738 73 791 0.0 603
MsG0480018362.01.T01 MTR_8g016160 40.814 811 399 21 6 808 8 745 0.0 571
MsG0480018362.01.T01 MTR_8g033080 46.564 582 280 11 26 589 258 826 7.03e-170 512
MsG0480018362.01.T01 MTR_1g083620 32.636 239 124 10 497 725 477 688 3.87e-21 99.4
MsG0480018362.01.T01 MTR_1g083620 28.270 237 110 9 211 426 127 324 1.16e-15 82.0
MsG0480018362.01.T01 MTR_1g083620 32.636 239 124 10 497 725 737 948 5.41e-21 99.4
MsG0480018362.01.T01 MTR_1g083620 28.692 237 109 10 211 426 387 584 7.88e-16 82.8
MsG0480018362.01.T01 MTR_5g023040 54.930 71 29 1 324 394 806 873 1.05e-18 91.7
MsG0480018362.01.T01 MTR_2g435560 30.924 249 132 9 456 692 600 820 2.40e-18 90.9
MsG0480018362.01.T01 MTR_2g435560 27.155 232 119 8 211 426 253 450 3.26e-15 80.5
MsG0480018362.01.T01 MTR_2g435560 30.924 249 132 9 456 692 735 955 3.51e-18 90.5
MsG0480018362.01.T01 MTR_2g435560 27.155 232 119 8 211 426 388 585 2.99e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018362.01.T01 AT3G15730 81.605 810 147 2 1 808 1 810 0.0 1419
MsG0480018362.01.T01 AT1G52570 81.235 810 150 2 1 808 1 810 0.0 1410
MsG0480018362.01.T01 AT1G52570 81.235 810 150 2 1 808 1 810 0.0 1410
MsG0480018362.01.T01 AT1G52570 81.235 810 150 2 1 808 1 810 0.0 1410
MsG0480018362.01.T01 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MsG0480018362.01.T01 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MsG0480018362.01.T01 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MsG0480018362.01.T01 AT5G25370 64.334 743 257 6 72 808 5 745 0.0 1001
MsG0480018362.01.T01 AT2G42010 45.388 824 395 17 6 796 271 1072 0.0 727
MsG0480018362.01.T01 AT2G42010 44.326 846 397 17 6 796 271 1097 0.0 721
MsG0480018362.01.T01 AT4G11830 44.928 828 403 15 6 796 34 845 0.0 715
MsG0480018362.01.T01 AT4G11840 45.157 826 404 15 6 796 44 855 0.0 715
MsG0480018362.01.T01 AT4G00240 46.415 767 378 13 50 796 11 764 0.0 714
MsG0480018362.01.T01 AT4G00240 46.415 767 378 13 50 796 128 881 0.0 713
MsG0480018362.01.T01 AT4G00240 45.386 791 394 14 26 796 144 916 0.0 713
MsG0480018362.01.T01 AT4G11830 46.323 775 372 13 50 796 55 813 0.0 713
MsG0480018362.01.T01 AT4G11850 45.200 823 404 16 6 796 40 847 0.0 703
MsG0480018362.01.T01 AT4G11840 44.606 825 380 15 6 796 44 825 0.0 694
MsG0480018362.01.T01 AT4G35790 46.366 798 369 17 50 808 80 857 0.0 676
MsG0480018362.01.T01 AT4G35790 45.983 809 367 18 50 808 80 868 0.0 669
MsG0480018362.01.T01 AT1G55180 40.678 767 402 17 50 808 19 740 0.0 586
MsG0480018362.01.T01 AT1G55180 39.286 812 427 18 5 808 9 762 0.0 585
MsG0480018362.01.T01 AT4G35790 46.078 612 283 12 50 626 80 679 4.03e-173 515
MsG0480018362.01.T01 AT4G11830 43.669 616 307 11 6 596 34 634 2.28e-169 504
MsG0480018362.01.T01 AT4G11830 43.907 599 296 11 6 579 34 617 7.10e-165 492
MsG0480018362.01.T01 AT3G05630 30.932 236 126 8 499 724 714 922 3.32e-20 97.1
MsG0480018362.01.T01 AT3G05630 27.469 324 152 13 131 426 304 572 1.95e-15 81.6
MsG0480018362.01.T01 AT3G16785 32.283 254 122 11 456 692 710 930 3.51e-19 93.6
MsG0480018362.01.T01 AT3G16785 30.942 223 104 9 220 426 389 577 1.27e-15 82.0
MsG0480018362.01.T01 AT3G16785 32.283 254 122 11 456 692 710 930 3.51e-19 93.6
MsG0480018362.01.T01 AT3G16785 30.942 223 104 9 220 426 389 577 1.27e-15 82.0
MsG0480018362.01.T01 AT3G16785 32.283 254 122 11 456 692 710 930 3.52e-19 93.6
MsG0480018362.01.T01 AT3G16785 30.942 223 104 9 220 426 389 577 1.14e-15 82.0
MsG0480018362.01.T01 AT3G16785 32.283 254 122 11 456 692 710 930 3.52e-19 93.6
MsG0480018362.01.T01 AT3G16785 30.942 223 104 9 220 426 389 577 1.14e-15 82.0
MsG0480018362.01.T01 AT3G16785 32.283 254 122 11 456 692 710 930 3.86e-19 93.6
MsG0480018362.01.T01 AT3G16785 30.942 223 104 9 220 426 389 577 1.28e-15 82.0
MsG0480018362.01.T01 AT3G16785 32.283 254 122 11 456 692 710 930 3.94e-19 93.6
MsG0480018362.01.T01 AT3G16785 30.942 223 104 9 220 426 389 577 1.23e-15 82.0

Find 232 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAGGTGGGTGGAAATTT+TGG 0.132980 4:-3854113 MsG0480018362.01.T01:CDS
GCTTGAACCGATGCACTTTC+TGG 0.142366 4:+3852747 None:intergenic
ATTGATGGTGGGGCTGCTTT+TGG 0.174765 4:-3853074 MsG0480018362.01.T01:CDS
GCAGCATCTTCAGGAGTTTC+TGG 0.186898 4:+3853047 None:intergenic
ATCGGTTGGTTTGTTGAAAA+AGG 0.188851 4:-3853648 MsG0480018362.01.T01:CDS
TCCATCCCCGGTAACATTTC+CGG 0.219913 4:-3853135 MsG0480018362.01.T01:CDS
ATCCCTAAAATACCACTTTC+TGG 0.238358 4:-3853896 MsG0480018362.01.T01:CDS
CGTTCTTCTGCCTTGGTAAT+CGG 0.254696 4:-3852623 MsG0480018362.01.T01:CDS
TCGCTCCGTCCATTGATCTT+TGG 0.259842 4:+3852318 None:intergenic
TTTCTTTGGTGAGGGATTCT+AGG 0.264603 4:-3853769 MsG0480018362.01.T01:CDS
ACCAGATTGCTGACAAATAT+TGG 0.280067 4:-3852127 MsG0480018362.01.T01:CDS
AGGATTTACTTGTCTCTCTA+AGG 0.282625 4:-3853181 MsG0480018362.01.T01:CDS
TGTTTATACCGAAATTTCTT+TGG 0.307662 4:-3853783 MsG0480018362.01.T01:CDS
CCAGCTCTCGCAGCATCTTC+AGG 0.308289 4:+3853038 None:intergenic
AAAAGTCTAGTGAAGGTGTT+AGG 0.315711 4:-3853700 MsG0480018362.01.T01:CDS
CCTATCCTTACTACTTAGTT+TGG 0.315754 4:-3851942 MsG0480018362.01.T01:exon
ACTCTATGCTACCATTGATT+TGG 0.326580 4:-3854332 MsG0480018362.01.T01:CDS
CCTGTTGGAGCAACTTTAAT+CGG 0.329996 4:-3854181 MsG0480018362.01.T01:CDS
CTTGAACCGATGCACTTTCT+GGG 0.343605 4:+3852748 None:intergenic
ATCCCTCACCAAAGAAATTT+CGG 0.345154 4:+3853775 None:intergenic
GTGAAAAGACTCGTACCATT+TGG 0.347746 4:+3854258 None:intergenic
ATCTTAAGTGAAAGTTCCTT+TGG 0.350014 4:+3852840 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 4:+3852126 None:intergenic
TTTCATCAACCTAACTTTCC+AGG 0.354896 4:-3853326 MsG0480018362.01.T01:CDS
GACACCAAGGCTCGGATTCT+CGG 0.360309 4:-3851987 MsG0480018362.01.T01:CDS
ACCACCATCATCAGGATTGC+GGG 0.363530 4:+3853550 None:intergenic
TGCATCGGTTCAAGCAATAT+TGG 0.369787 4:-3852739 MsG0480018362.01.T01:CDS
TCACATTTACTGTGCTCATA+TGG 0.370819 4:-3854239 MsG0480018362.01.T01:CDS
TGAAAAGACTCGTACCATTT+GGG 0.379443 4:+3854259 None:intergenic
ATGCTTATATTAATGCTATT+CGG 0.380918 4:-3852971 MsG0480018362.01.T01:CDS
CCGATTAAAGTTGCTCCAAC+AGG 0.380987 4:+3854181 None:intergenic
TCGTAATCTGAATCAGGTTC+TGG 0.383287 4:+3852561 None:intergenic
TTCTAGGAGGCCAAAGGCTG+GGG 0.387473 4:-3853753 MsG0480018362.01.T01:CDS
GCCTTGAAGGACCGATCGCT+TGG 0.387667 4:-3853250 MsG0480018362.01.T01:CDS
CTGGCTGTCTTGCAGCTAAA+TGG 0.393197 4:+3852258 None:intergenic
ATTGAGGAAACTGTTGGTCT+TGG 0.395386 4:-3854370 MsG0480018362.01.T01:CDS
TGTCCACAACCACAATCTTC+TGG 0.398916 4:+3853483 None:intergenic
AGAATCCGAGCCTTGGTGTC+GGG 0.406985 4:+3851990 None:intergenic
CAGCATCTTCAGGAGTTTCT+GGG 0.410189 4:+3853048 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 4:+3852870 None:intergenic
ATTGCAGCACCTGGAAAGTT+AGG 0.413190 4:+3853317 None:intergenic
AAACTTACCTATCATCATCT+TGG 0.413744 4:+3852497 None:intergenic
TGATGGTGGTAGCATCATTC+AGG 0.414188 4:-3853537 MsG0480018362.01.T01:CDS
CCTGAAGATGCTGCGAGAGC+TGG 0.415758 4:-3853038 MsG0480018362.01.T01:CDS
ATTCAAAGCGCTAAATTTCC+TGG 0.415896 4:-3853998 MsG0480018362.01.T01:CDS
ATGGCACAAATTCATCTTCA+TGG 0.419518 4:-3855490 MsG0480018362.01.T01:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 4:-3852126 MsG0480018362.01.T01:CDS
TGATCATCCGGAAATGTTAC+CGG 0.420713 4:+3853128 None:intergenic
GTTCTTCTGCCTTGGTAATC+GGG 0.421037 4:-3852622 MsG0480018362.01.T01:CDS
CAGCAATCTGGTTCACCTTA+CGG 0.421232 4:+3852138 None:intergenic
GGGACACCCTCTGGCCACAT+TGG 0.421738 4:+3852768 None:intergenic
GGACACCCTCTGGCCACATT+GGG 0.423065 4:+3852769 None:intergenic
TTCCATGTCTCGTGATCATC+CGG 0.424135 4:+3853116 None:intergenic
ATTGAAAATCAGTATTTCCT+TGG 0.426891 4:-3852927 MsG0480018362.01.T01:CDS
TTAACTGCTATGACTTTAGC+TGG 0.427079 4:-3851751 MsG0480018362.01.T01:three_prime_UTR
CATGAAACGTCGGGACTGTT+GGG 0.428061 4:+3852533 None:intergenic
CAGCTGTTTAGATCTATTGA+TGG 0.430877 4:-3853089 MsG0480018362.01.T01:CDS
GATGTACAAGGATATCGTTC+TGG 0.435578 4:-3852691 MsG0480018362.01.T01:CDS
GTTCATACCAAGATGATGAT+AGG 0.435880 4:-3852504 MsG0480018362.01.T01:intron
TCTTCGAACCCTCTTGTATC+GGG 0.436117 4:+3854077 None:intergenic
CGCTTATCCGACCTTCCACC+AGG 0.436478 4:+3853452 None:intergenic
TCACTCGAGCACGACCTTCC+TGG 0.436784 4:-3852086 MsG0480018362.01.T01:CDS
TGAATCAGGTTCTGGTTGTT+CGG 0.437834 4:+3852569 None:intergenic
TCCGGAAATGTTACCGGGGA+TGG 0.438701 4:+3853134 None:intergenic
AGCTAAATGGTAGGGCTGAT+AGG 0.439308 4:+3852271 None:intergenic
TCTTAAGTGAAAGTTCCTTT+GGG 0.441263 4:+3852841 None:intergenic
CTCACAGAGGAAAGGATGTA+AGG 0.441756 4:-3853957 MsG0480018362.01.T01:CDS
TGTTTAGATCTATTGATGGT+GGG 0.446034 4:-3853085 MsG0480018362.01.T01:CDS
TCATGAAACGTCGGGACTGT+TGG 0.446105 4:+3852532 None:intergenic
CTGTCTTGCAGCTAAATGGT+AGG 0.447434 4:+3852262 None:intergenic
GACATTCATTCCCGCCTTGA+AGG 0.449178 4:-3853263 MsG0480018362.01.T01:CDS
ATCTTCGAACCCTCTTGTAT+CGG 0.455754 4:+3854076 None:intergenic
AAACACATGATATACATTAC+CGG 0.460467 4:-3853812 MsG0480018362.01.T01:CDS
TATTTGACGTTCTTCTGCCT+TGG 0.462738 4:-3852630 MsG0480018362.01.T01:CDS
GCACTTTCTGGGACACCCTC+TGG 0.462871 4:+3852759 None:intergenic
AAAGTCTAGTGAAGGTGTTA+GGG 0.463222 4:-3853699 MsG0480018362.01.T01:CDS
TAGTAATGAAAACAAAGATT+AGG 0.463891 4:+3851874 None:intergenic
GAAACCGCACAGTTCTTTGA+AGG 0.467829 4:-3853599 MsG0480018362.01.T01:CDS
GATTCTAGGAGGCCAAAGGC+TGG 0.467985 4:-3853755 MsG0480018362.01.T01:CDS
GCCGCCGAGAATCCGAGCCT+TGG 0.470752 4:+3851983 None:intergenic
TATCCGGCACATGAGAATCT+TGG 0.471426 4:+3853924 None:intergenic
GCGAGAGCTGGGCTTATTAG+TGG 0.471776 4:-3853026 MsG0480018362.01.T01:CDS
CACTTGCTTCGCTATCCGAT+TGG 0.472419 4:-3852062 MsG0480018362.01.T01:CDS
TCACCAGAAGATTGTGGTTG+TGG 0.472585 4:-3853486 MsG0480018362.01.T01:CDS
GCTCTCTCGTAATCTGAATC+AGG 0.473696 4:+3852555 None:intergenic
TTCGGTATAAACAGACCAAC+CGG 0.477585 4:+3853793 None:intergenic
ATTCTAGGAGGCCAAAGGCT+GGG 0.483116 4:-3853754 MsG0480018362.01.T01:CDS
CTGAAGATGCTGCGAGAGCT+GGG 0.483144 4:-3853037 MsG0480018362.01.T01:CDS
AACTAAGTAGTAAGGATAGG+AGG 0.484222 4:+3851945 None:intergenic
CCTTGAAGGACCGATCGCTT+GGG 0.484290 4:-3853249 MsG0480018362.01.T01:CDS
CTTATCAGCCTCATCGGTGT+TGG 0.485595 4:-3853865 MsG0480018362.01.T01:CDS
TTATCAGCCTCATCGGTGTT+GGG 0.486409 4:-3853864 MsG0480018362.01.T01:CDS
CCCAAGCGATCGGTCCTTCA+AGG 0.490151 4:+3853249 None:intergenic
TTACCAAGATTCTCATGTGC+CGG 0.490601 4:-3853927 MsG0480018362.01.T01:CDS
GGAGATGTCACACAGCTGCC+TGG 0.492596 4:-3852026 MsG0480018362.01.T01:CDS
TACCGAAATTTCTTTGGTGA+GGG 0.493877 4:-3853777 MsG0480018362.01.T01:CDS
CCAGGTGCTGCAATCACAAA+AGG 0.496013 4:-3853308 MsG0480018362.01.T01:CDS
CCATTCAAGACCTCCTCGAC+AGG 0.496478 4:+3854145 None:intergenic
CATTGATCTTTGGTTGATGT+TGG 0.498653 4:+3852328 None:intergenic
AGGATATCGTTCTGGCACTC+AGG 0.498950 4:-3852683 MsG0480018362.01.T01:CDS
TTCTATTATTCCTCCATCCC+CGG 0.504693 4:-3853147 MsG0480018362.01.T01:CDS
TCAGGTTCTGGTTGTTCGGA+AGG 0.504977 4:+3852573 None:intergenic
CTGTTTAGATCTATTGATGG+TGG 0.506397 4:-3853086 MsG0480018362.01.T01:CDS
ATTATGAGTAAGATTGAAGC+CGG 0.506694 4:-3852819 MsG0480018362.01.T01:CDS
CAATCACAAAAGGCGGTCCA+AGG 0.512335 4:-3853298 MsG0480018362.01.T01:CDS
CGTTCTGGCACTCAGGGCAA+AGG 0.513948 4:-3852676 MsG0480018362.01.T01:CDS
CCTTCACTAGCAACTCCAAT+CGG 0.513962 4:+3852047 None:intergenic
ATGTCACGAAAGACCGCAGT+TGG 0.514050 4:-3854030 MsG0480018362.01.T01:CDS
ATGATGCTACCACCATCATC+AGG 0.514375 4:+3853542 None:intergenic
GAAACTGTTGGTCTTGGAAA+GGG 0.514436 4:-3854364 MsG0480018362.01.T01:CDS
GATCATCCGGAAATGTTACC+GGG 0.516686 4:+3853129 None:intergenic
AAGCTTAATGCTGGTGGTGG+AGG 0.521498 4:-3855436 MsG0480018362.01.T01:CDS
TGGTGAGGAAATTGATAGGT+GGG 0.528326 4:-3854125 MsG0480018362.01.T01:CDS
AAGCAATATTGGACTGGCAG+AGG 0.531832 4:-3852728 MsG0480018362.01.T01:CDS
AACATAGATCATGAAACGTC+GGG 0.533395 4:+3852524 None:intergenic
ATGTCATGCCAAGGTTCCCT+TGG 0.535392 4:+3853281 None:intergenic
AGCGATCGGTCCTTCAAGGC+GGG 0.535565 4:+3853253 None:intergenic
GAGAATCCGAGCCTTGGTGT+CGG 0.538506 4:+3851989 None:intergenic
TCCAAGCAAAAGAGCTTCCA+AGG 0.539099 4:+3852910 None:intergenic
CCATGGACTTGACCACGTGC+TGG 0.539957 4:+3852239 None:intergenic
GTTTAGATCTATTGATGGTG+GGG 0.540703 4:-3853084 MsG0480018362.01.T01:CDS
CAAAATATTGCAGCTTCACA+TGG 0.543780 4:+3854053 None:intergenic
TCTTGCCTTCTCCAAATCAA+TGG 0.546831 4:+3854321 None:intergenic
ACTAAGTAGTAAGGATAGGA+GGG 0.550130 4:+3851946 None:intergenic
CCAAACTAAGTAGTAAGGAT+AGG 0.550288 4:+3851942 None:intergenic
TGATTTGGAGAAGGCAAGAG+TGG 0.552030 4:-3854317 MsG0480018362.01.T01:CDS
AAGGCGGTCCAAGGGAACCT+TGG 0.552221 4:-3853289 MsG0480018362.01.T01:CDS
GTGAAAGATGATAATCCTGT+TGG 0.552822 4:-3854196 MsG0480018362.01.T01:CDS
CCAGCACGTGGTCAAGTCCA+TGG 0.552842 4:-3852239 MsG0480018362.01.T01:CDS
TAAGTCTTGCCACCAGAAAG+TGG 0.553280 4:+3853884 None:intergenic
ATGAGCATACTAATCCCAAA+TGG 0.553693 4:-3854273 MsG0480018362.01.T01:CDS
GTTCTGGCACTCAGGGCAAA+GGG 0.553846 4:-3852675 MsG0480018362.01.T01:CDS
TGCTACCATTGATTTGGAGA+AGG 0.554396 4:-3854326 MsG0480018362.01.T01:CDS
GGATTTACTTGTCTCTCTAA+GGG 0.554563 4:-3853180 MsG0480018362.01.T01:CDS
CAAAACATTGAGGAAACTGT+TGG 0.557099 4:-3854376 MsG0480018362.01.T01:CDS
GGAAACTGTTGGTCTTGGAA+AGG 0.558000 4:-3854365 MsG0480018362.01.T01:CDS
CAACATCAACCAAAGATCAA+TGG 0.560182 4:-3852327 MsG0480018362.01.T01:CDS
TGAATGGTGAGGAAATTGAT+AGG 0.560352 4:-3854129 MsG0480018362.01.T01:CDS
ATACCGAAATTTCTTTGGTG+AGG 0.560671 4:-3853778 MsG0480018362.01.T01:CDS
TTCCGGATGATCACGAGACA+TGG 0.561317 4:-3853118 MsG0480018362.01.T01:CDS
GATATTAAGCCTGAAGACAT+TGG 0.562253 4:-3852879 MsG0480018362.01.T01:CDS
TCTTCATGCTACTATCTATG+AGG 0.563357 4:-3855464 MsG0480018362.01.T01:CDS
GATGACGAATACATAATCGT+TGG 0.564804 4:-3852356 MsG0480018362.01.T01:CDS
AACGATGGAGGAAGCAAGGT+GGG 0.565356 4:-3853205 MsG0480018362.01.T01:CDS
GGATATCGTTCTGGCACTCA+GGG 0.565745 4:-3852682 MsG0480018362.01.T01:CDS
CGGTTCAAGCAATATTGGAC+TGG 0.566255 4:-3852734 MsG0480018362.01.T01:CDS
TTATGAGTAAGATTGAAGCC+GGG 0.567721 4:-3852818 MsG0480018362.01.T01:CDS
TGGGATGATAGAACATCGGT+TGG 0.573109 4:-3853662 MsG0480018362.01.T01:CDS
TGTCTTGCAGCTAAATGGTA+GGG 0.573776 4:+3852263 None:intergenic
TACTCATCACCAGAAGATTG+TGG 0.574698 4:-3853492 MsG0480018362.01.T01:CDS
GGATAGCGAAGCAAGTGTCC+AGG 0.581630 4:+3852068 None:intergenic
CCTGTCGAGGAGGTCTTGAA+TGG 0.582151 4:-3854145 MsG0480018362.01.T01:CDS
AGCTGGGCTTATTAGTGGAA+AGG 0.583055 4:-3853021 MsG0480018362.01.T01:CDS
TGCTTTGCATCTCATCCCAA+AGG 0.583132 4:-3852856 MsG0480018362.01.T01:CDS
GAATCCGAGCCTTGGTGTCG+GGG 0.583277 4:+3851991 None:intergenic
GCAAGACTTATCAGCCTCAT+CGG 0.586153 4:-3853871 MsG0480018362.01.T01:CDS
TAGGTTGATGAAAATCATCA+TGG 0.587769 4:+3853336 None:intergenic
ACAGATCAGGCAAAACATTG+AGG 0.589416 4:-3854386 MsG0480018362.01.T01:intron
AAGTAGTAAGGATAGGAGGG+AGG 0.592783 4:+3851949 None:intergenic
AAAGATCAATGGACGGAGCG+AGG 0.593749 4:-3852316 MsG0480018362.01.T01:CDS
CCACCATCATCAGGATTGCG+GGG 0.594046 4:+3853551 None:intergenic
GAGGGACTCTGAGATAGCGA+TGG 0.594266 4:-3852297 MsG0480018362.01.T01:CDS
AAAGACCGCAGTTGGGCTCG+AGG 0.594612 4:-3854022 MsG0480018362.01.T01:CDS
ATGGAGGAAGCAAGGTGGGA+AGG 0.595810 4:-3853201 MsG0480018362.01.T01:CDS
TACCACCATCATCAGGATTG+CGG 0.597814 4:+3853549 None:intergenic
GGAAATGTTACCGGGGATGG+AGG 0.599535 4:+3853137 None:intergenic
AGGGACTCTGAGATAGCGAT+GGG 0.600455 4:-3852296 MsG0480018362.01.T01:CDS
GATAAGCTTAATGCTGGTGG+TGG 0.603160 4:-3855439 MsG0480018362.01.T01:CDS
GAGGTTGATAAGCTTAATGC+TGG 0.603431 4:-3855445 MsG0480018362.01.T01:CDS
AAATCAAGAATGTATCCGTA+AGG 0.604233 4:-3852153 MsG0480018362.01.T01:CDS
TGTCACGAAAGACCGCAGTT+GGG 0.604750 4:-3854029 MsG0480018362.01.T01:CDS
ACATGATATACATTACCGGT+TGG 0.606826 4:-3853808 MsG0480018362.01.T01:CDS
CCGATTGGAGTTGCTAGTGA+AGG 0.611060 4:-3852047 MsG0480018362.01.T01:CDS
TATGAGTAAGATTGAAGCCG+GGG 0.612358 4:-3852817 MsG0480018362.01.T01:CDS
CTTTGGTGAGGGATTCTAGG+AGG 0.613168 4:-3853766 MsG0480018362.01.T01:CDS
AAGATCAATGGACGGAGCGA+GGG 0.613208 4:-3852315 MsG0480018362.01.T01:CDS
TGTTTAACTTTGAGCAACGA+TGG 0.613445 4:-3853220 MsG0480018362.01.T01:CDS
CGGGAATGAATGTCATGCCA+AGG 0.614171 4:+3853272 None:intergenic
AACAACACATCCCAAGCGAT+CGG 0.615121 4:+3853239 None:intergenic
GATTTGGAGAAGGCAAGAGT+GGG 0.615789 4:-3854316 MsG0480018362.01.T01:CDS
AATCACAAAAGGCGGTCCAA+GGG 0.616469 4:-3853297 MsG0480018362.01.T01:CDS
GAGCAACGATGGAGGAAGCA+AGG 0.617826 4:-3853209 MsG0480018362.01.T01:CDS
TGAATTACCTGGTGGAAGGT+CGG 0.619368 4:-3853459 MsG0480018362.01.T01:CDS
TGGAGAAGGCAAGAGTGGGA+AGG 0.621315 4:-3854312 MsG0480018362.01.T01:CDS
TGGAGGAAATTTCCTCAGCA+TGG 0.621349 4:-3855419 MsG0480018362.01.T01:intron
AGGGAATCGAGGAAGATCCT+CGG 0.622355 4:-3852656 MsG0480018362.01.T01:CDS
TCTAGGAGGCCAAAGGCTGG+GGG 0.624607 4:-3853752 MsG0480018362.01.T01:CDS
AGCATATGTGCCTGTCGAGG+AGG 0.627896 4:-3854155 MsG0480018362.01.T01:CDS
AACAATGGAGATGATGTACA+AGG 0.631124 4:-3852703 MsG0480018362.01.T01:CDS
GAACATAGATCATGAAACGT+CGG 0.633210 4:+3852523 None:intergenic
TGTTGTCCCAATGTGGCCAG+AGG 0.634138 4:-3852775 MsG0480018362.01.T01:CDS
GAGGGATTCTAGGAGGCCAA+AGG 0.637811 4:-3853759 MsG0480018362.01.T01:CDS
CTTCTGGTGATGAGTAAACA+TGG 0.641961 4:+3853499 None:intergenic
CGAGGAGGTCTTGAATGGTG+AGG 0.642464 4:-3854140 MsG0480018362.01.T01:CDS
GAATGCCTCGAGCCCAACTG+CGG 0.644714 4:+3854017 None:intergenic
TGAGGAAATTGATAGGTGGG+TGG 0.645001 4:-3854122 MsG0480018362.01.T01:CDS
GCATTATGGTATGAGCACCT+TGG 0.646788 4:-3852206 MsG0480018362.01.T01:CDS
CACCATCATCAGGATTGCGG+GGG 0.647197 4:+3853552 None:intergenic
AGGAGTCATGAAGCATGCCA+AGG 0.651697 4:+3852189 None:intergenic
GTTGTCCCAATGTGGCCAGA+GGG 0.653005 4:-3852774 MsG0480018362.01.T01:CDS
AAGAGCATATGTGCCTGTCG+AGG 0.653021 4:-3854158 MsG0480018362.01.T01:CDS
AATCGGGAAGTAAAGAAACA+AGG 0.653307 4:-3852606 MsG0480018362.01.T01:CDS
TATCATATCTTCCATCACAA+AGG 0.653464 4:+3853399 None:intergenic
TCAGCCTCATCGGTGTTGGG+AGG 0.653572 4:-3853861 MsG0480018362.01.T01:CDS
ATCAACCAAAGATCAATGGA+CGG 0.654662 4:-3852323 MsG0480018362.01.T01:CDS
AGCGAAGCAAGTGTCCAGGA+AGG 0.657401 4:+3852072 None:intergenic
AATAAAACAGTACCATGCTG+AGG 0.661732 4:+3855407 None:intergenic
ACAGTGAATTACCTGGTGGA+AGG 0.662406 4:-3853463 MsG0480018362.01.T01:CDS
GGGTGTCCCAGAAAGTGCAT+CGG 0.663109 4:-3852754 MsG0480018362.01.T01:CDS
CAACGATGGAGGAAGCAAGG+TGG 0.668752 4:-3853206 MsG0480018362.01.T01:CDS
AAGAACGTCAAATAATTCCG+AGG 0.670151 4:+3852639 None:intergenic
AAGCGATCGGTCCTTCAAGG+CGG 0.671322 4:+3853252 None:intergenic
TCTTTACTTCCCGATTACCA+AGG 0.671573 4:+3852613 None:intergenic
GGTGCTGCAATCACAAAAGG+CGG 0.672665 4:-3853305 MsG0480018362.01.T01:CDS
ACTCAGGGCAAAGGGAATCG+AGG 0.672681 4:-3852667 MsG0480018362.01.T01:CDS
ATGGTGAGGAAATTGATAGG+TGG 0.675988 4:-3854126 MsG0480018362.01.T01:CDS
ATATCCTCCCAACACCGATG+AGG 0.682280 4:+3853857 None:intergenic
TGTTTGGGATGATAGAACAT+CGG 0.683265 4:-3853666 MsG0480018362.01.T01:CDS
TGTACGTTGTTGTCCCAATG+TGG 0.686098 4:-3852782 MsG0480018362.01.T01:CDS
GCTGCAAGACAGCCAGCACG+TGG 0.687862 4:-3852251 MsG0480018362.01.T01:CDS
GTTGATAAGCTTAATGCTGG+TGG 0.689428 4:-3855442 MsG0480018362.01.T01:CDS
ACCAAGGCTCGGATTCTCGG+CGG 0.691037 4:-3851984 MsG0480018362.01.T01:CDS
ATAATGCCATGCGAAAACCA+TGG 0.691651 4:+3852222 None:intergenic
CCTAAAATACCACTTTCTGG+TGG 0.698637 4:-3853893 MsG0480018362.01.T01:CDS
GTTGTGGACAGTGAATTACC+TGG 0.700680 4:-3853470 MsG0480018362.01.T01:CDS
ATCATCCGGAAATGTTACCG+GGG 0.705073 4:+3853130 None:intergenic
CCCCGCAATCCTGATGATGG+TGG 0.710398 4:-3853551 MsG0480018362.01.T01:CDS
TTAACTTTGAGCAACGATGG+AGG 0.710551 4:-3853217 MsG0480018362.01.T01:CDS
GGACTGGCAGAGGAGAACAA+TGG 0.727822 4:-3852718 MsG0480018362.01.T01:CDS
AGTACCTTCAAAGAACTGTG+CGG 0.748352 4:+3853595 None:intergenic
CTGGTGATGAGTAAACATGG+TGG 0.787330 4:+3853502 None:intergenic
GTGGACAGTGAATTACCTGG+TGG 0.811877 4:-3853467 MsG0480018362.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTGTTTTATTTAATTATTT+TGG - Chr4:3851852-3851871 MsG0480018362.01.T01:three_prime_UTR 10.0%
!! ATAAGTATAAGCAAATAAAT+AGG + Chr4:3852841-3852860 None:intergenic 15.0%
!! TAAGTATAAGCAAATAAATA+GGG + Chr4:3852840-3852859 None:intergenic 15.0%
!!! AAAAAAAAAGAATATTTTGG+TGG - Chr4:3851985-3852004 MsG0480018362.01.T01:CDS 15.0%
!!! ATTTTTAGATTTCATGTTTT+TGG - Chr4:3851904-3851923 MsG0480018362.01.T01:three_prime_UTR 15.0%
!! AAATCACAAAAATCTGTATT+TGG + Chr4:3855469-3855488 None:intergenic 20.0%
!! ATGCTTATATTAATGCTATT+CGG - Chr4:3854276-3854295 MsG0480018362.01.T01:CDS 20.0%
!! TAGTAATGAAAACAAAGATT+AGG + Chr4:3855376-3855395 None:intergenic 20.0%
!!! AATATTGATAATTAACCAAC+AGG + Chr4:3852226-3852245 None:intergenic 20.0%
!!! TAATTTGTTTGATTTAGCTT+TGG + Chr4:3852709-3852728 None:intergenic 20.0%
!!! TTTAATTATTTTGGCCTATT+TGG - Chr4:3851861-3851880 MsG0480018362.01.T01:three_prime_UTR 20.0%
!!! TTTGTTTTCATTACTATTTG+TGG - Chr4:3855380-3855399 MsG0480018362.01.T01:intron 20.0%
! AAAAACCAAACTAAGTAGTA+AGG + Chr4:3855313-3855332 None:intergenic 25.0%
! AAACACATGATATACATTAC+CGG - Chr4:3853435-3853454 MsG0480018362.01.T01:CDS 25.0%
! AATAGGGTCATTAATAATGA+AGG + Chr4:3852824-3852843 None:intergenic 25.0%
! ATTGAAAATCAGTATTTCCT+TGG - Chr4:3854320-3854339 MsG0480018362.01.T01:CDS 25.0%
! GATAAAGTTAATGGTTATTC+AGG + Chr4:3852541-3852560 None:intergenic 25.0%
! GATGCATAAGATAAAGTTAA+TGG + Chr4:3852550-3852569 None:intergenic 25.0%
! TGTTTATACCGAAATTTCTT+TGG - Chr4:3853464-3853483 MsG0480018362.01.T01:CDS 25.0%
! TTGAATCATTAGATCCAAAT+AGG + Chr4:3851878-3851897 None:intergenic 25.0%
!!! AAAAAAGAATATTTTGGTGG+TGG - Chr4:3851988-3852007 MsG0480018362.01.T01:CDS 25.0%
!!! AAAAAGAATATTTTGGTGGT+GGG - Chr4:3851989-3852008 MsG0480018362.01.T01:CDS 25.0%
!!! ATTTTAGGGATGAAATTATC+CGG + Chr4:3853342-3853361 None:intergenic 25.0%
AAACGCAAAACTAAAGAAAC+TGG + Chr4:3852791-3852810 None:intergenic 30.0%
AAACTTACCTATCATCATCT+TGG + Chr4:3854753-3854772 None:intergenic 30.0%
AAAGCAAAATCCAATGAGTA+AGG + Chr4:3852625-3852644 None:intergenic 30.0%
AAATCAAGAATGTATCCGTA+AGG - Chr4:3855094-3855113 MsG0480018362.01.T01:intron 30.0%
ATCTTAAGTGAAAGTTCCTT+TGG + Chr4:3854410-3854429 None:intergenic 30.0%
ATTATGAGTAAGATTGAAGC+CGG - Chr4:3854428-3854447 MsG0480018362.01.T01:intron 30.0%
CTAAAGAAAAAGTCTAGTGA+AGG - Chr4:3853540-3853559 MsG0480018362.01.T01:CDS 30.0%
CTTTATACATACATTGCACA+TGG - Chr4:3852751-3852770 MsG0480018362.01.T01:CDS 30.0%
TACATTGCACATACATACAT+AGG - Chr4:3852660-3852679 MsG0480018362.01.T01:CDS 30.0%
TATCATATCTTCCATCACAA+AGG + Chr4:3853851-3853870 None:intergenic 30.0%
TCTTAAGTGAAAGTTCCTTT+GGG + Chr4:3854409-3854428 None:intergenic 30.0%
TGCTTATACTTATACAGATC+AGG - Chr4:3852848-3852867 MsG0480018362.01.T01:CDS 30.0%
! ATTCTTGATTTTCTGGATGA+AGG + Chr4:3855085-3855104 None:intergenic 30.0%
! CTCTGTGAGAAAAAAGTATA+CGG + Chr4:3853279-3853298 None:intergenic 30.0%
! TGTTTAGATCTATTGATGGT+GGG - Chr4:3854162-3854181 MsG0480018362.01.T01:CDS 30.0%
! TTGGATTTTGCTTTCGTTAT+TGG - Chr4:3852631-3852650 MsG0480018362.01.T01:CDS 30.0%
!! TAGGTTGATGAAAATCATCA+TGG + Chr4:3853914-3853933 None:intergenic 30.0%
!! TGATTTAGCTTTGGTTATTC+AGG + Chr4:3852700-3852719 None:intergenic 30.0%
!!! AAAAGAATATTTTGGTGGTG+GGG - Chr4:3851990-3852009 MsG0480018362.01.T01:CDS 30.0%
!!! AAGAATTGTGAGTTTTGTTG+GGG - Chr4:3853818-3853837 MsG0480018362.01.T01:CDS 30.0%
!!! GAAGAATTGTGAGTTTTGTT+GGG - Chr4:3853817-3853836 MsG0480018362.01.T01:CDS 30.0%
AACAATGGAGATGATGTACA+AGG - Chr4:3854544-3854563 MsG0480018362.01.T01:intron 35.0%
AACATAGATCATGAAACGTC+GGG + Chr4:3854726-3854745 None:intergenic 35.0%
AACTAAGTAGTAAGGATAGG+AGG + Chr4:3855305-3855324 None:intergenic 35.0%
AAGAACGTCAAATAATTCCG+AGG + Chr4:3854611-3854630 None:intergenic 35.0%
AAGTCTAATCACAGATTCAC+TGG + Chr4:3852132-3852151 None:intergenic 35.0%
AATAAAACAGTACCATGCTG+AGG + Chr4:3851843-3851862 None:intergenic 35.0%
AATCGGGAAGTAAAGAAACA+AGG - Chr4:3854641-3854660 MsG0480018362.01.T01:intron 35.0%
ACATGATATACATTACCGGT+TGG - Chr4:3853439-3853458 MsG0480018362.01.T01:CDS 35.0%
ACCAGATTGCTGACAAATAT+TGG - Chr4:3855120-3855139 MsG0480018362.01.T01:intron 35.0%
ACTAAGTAGTAAGGATAGGA+GGG + Chr4:3855304-3855323 None:intergenic 35.0%
AGATCAGTTGAATGAACACA+AGG + Chr4:3852514-3852533 None:intergenic 35.0%
AGGATTTACTTGTCTCTCTA+AGG - Chr4:3854066-3854085 MsG0480018362.01.T01:CDS 35.0%
ATACCGAAATTTCTTTGGTG+AGG - Chr4:3853469-3853488 MsG0480018362.01.T01:CDS 35.0%
ATCAACCAAAGATCAATGGA+CGG - Chr4:3854924-3854943 MsG0480018362.01.T01:intron 35.0%
ATCCCTAAAATACCACTTTC+TGG - Chr4:3853351-3853370 MsG0480018362.01.T01:CDS 35.0%
ATCCCTCACCAAAGAAATTT+CGG + Chr4:3853475-3853494 None:intergenic 35.0%
ATGAGCATACTAATCCCAAA+TGG - Chr4:3852974-3852993 MsG0480018362.01.T01:CDS 35.0%
ATGGCACAAATTCATCTTCA+TGG - Chr4:3851757-3851776 MsG0480018362.01.T01:three_prime_UTR 35.0%
CAAAACATTGAGGAAACTGT+TGG - Chr4:3852871-3852890 MsG0480018362.01.T01:CDS 35.0%
CAAAATATTGCAGCTTCACA+TGG + Chr4:3853197-3853216 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG - Chr4:3854920-3854939 MsG0480018362.01.T01:intron 35.0%
CACAAGGTAGTTTCAATTGA+AGG + Chr4:3852498-3852517 None:intergenic 35.0%
CAGCTGTTTAGATCTATTGA+TGG - Chr4:3854158-3854177 MsG0480018362.01.T01:CDS 35.0%
CATCTGTTACAAATTAGGCA+TGG + Chr4:3852324-3852343 None:intergenic 35.0%
CCAAACTAAGTAGTAAGGAT+AGG + Chr4:3855308-3855327 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG - Chr4:3855121-3855140 MsG0480018362.01.T01:intron 35.0%
CCTATCCTTACTACTTAGTT+TGG - Chr4:3855305-3855324 MsG0480018362.01.T01:intron 35.0%
CTGTTTAGATCTATTGATGG+TGG - Chr4:3854161-3854180 MsG0480018362.01.T01:CDS 35.0%
GAAAAAAACCCGATACAAGA+GGG - Chr4:3853162-3853181 MsG0480018362.01.T01:CDS 35.0%
GAACATAGATCATGAAACGT+CGG + Chr4:3854727-3854746 None:intergenic 35.0%
GATATTAAGCCTGAAGACAT+TGG - Chr4:3854368-3854387 MsG0480018362.01.T01:CDS 35.0%
GATGACGAATACATAATCGT+TGG - Chr4:3854891-3854910 MsG0480018362.01.T01:intron 35.0%
GGATTTACTTGTCTCTCTAA+GGG - Chr4:3854067-3854086 MsG0480018362.01.T01:CDS 35.0%
GTGAAAGATGATAATCCTGT+TGG - Chr4:3853051-3853070 MsG0480018362.01.T01:CDS 35.0%
GTTCATACCAAGATGATGAT+AGG - Chr4:3854743-3854762 MsG0480018362.01.T01:intron 35.0%
GTTGAAAAAGGATGGTTTGA+TGG - Chr4:3853611-3853630 MsG0480018362.01.T01:CDS 35.0%
TACCGAAATTTCTTTGGTGA+GGG - Chr4:3853470-3853489 MsG0480018362.01.T01:CDS 35.0%
TCACATTTACTGTGCTCATA+TGG - Chr4:3853008-3853027 MsG0480018362.01.T01:CDS 35.0%
TCTTCATGCTACTATCTATG+AGG - Chr4:3851783-3851802 MsG0480018362.01.T01:three_prime_UTR 35.0%
TGAAAAAAACCCGATACAAG+AGG - Chr4:3853161-3853180 MsG0480018362.01.T01:CDS 35.0%
TGAAAAGACTCGTACCATTT+GGG + Chr4:3852991-3853010 None:intergenic 35.0%
TGAATGGTGAGGAAATTGAT+AGG - Chr4:3853118-3853137 MsG0480018362.01.T01:CDS 35.0%
TTAACTGCTATGACTTTAGC+TGG - Chr4:3855496-3855515 MsG0480018362.01.T01:exon 35.0%
TTATGAGTAAGATTGAAGCC+GGG - Chr4:3854429-3854448 MsG0480018362.01.T01:intron 35.0%
TTTCATCAACCTAACTTTCC+AGG - Chr4:3853921-3853940 MsG0480018362.01.T01:CDS 35.0%
! AAAAAAGTATACGGAACTCC+AGG + Chr4:3853270-3853289 None:intergenic 35.0%
! ACTCTATGCTACCATTGATT+TGG - Chr4:3852915-3852934 MsG0480018362.01.T01:CDS 35.0%
! ATTCAAAGCGCTAAATTTCC+TGG - Chr4:3853249-3853268 MsG0480018362.01.T01:CDS 35.0%
! CACCAGAAAGTGGTATTTTA+GGG + Chr4:3853356-3853375 None:intergenic 35.0%
! CATGCCTAATTTGTAACAGA+TGG - Chr4:3852322-3852341 MsG0480018362.01.T01:CDS 35.0%
! CATGTGTTTTGCATTAGTGA+TGG + Chr4:3853424-3853443 None:intergenic 35.0%
! CATTGATCTTTGGTTGATGT+TGG + Chr4:3854922-3854941 None:intergenic 35.0%
! CCTAATTTGTAACAGATGGT+GGG - Chr4:3852326-3852345 MsG0480018362.01.T01:CDS 35.0%
! CGGATACATTCTTGATTTTC+TGG + Chr4:3855092-3855111 None:intergenic 35.0%
! CTAATTTGTAACAGATGGTG+GGG - Chr4:3852327-3852346 MsG0480018362.01.T01:CDS 35.0%
! TGTTTAACTTTGAGCAACGA+TGG - Chr4:3854027-3854046 MsG0480018362.01.T01:CDS 35.0%
! TGTTTGGGATGATAGAACAT+CGG - Chr4:3853581-3853600 MsG0480018362.01.T01:CDS 35.0%
! TTGATTTTCTGGATGAAGGA+AGG + Chr4:3855081-3855100 None:intergenic 35.0%
! TTTAAGGTGGCTCAAAATGA+CGG - Chr4:3852359-3852378 MsG0480018362.01.T01:CDS 35.0%
!! AAAAGTCTAGTGAAGGTGTT+AGG - Chr4:3853547-3853566 MsG0480018362.01.T01:CDS 35.0%
!! AAAGTCTAGTGAAGGTGTTA+GGG - Chr4:3853548-3853567 MsG0480018362.01.T01:CDS 35.0%
!! ATCGGTTGGTTTGTTGAAAA+AGG - Chr4:3853599-3853618 MsG0480018362.01.T01:CDS 35.0%
!! CAAGAGTTCTAAAAAGTGAG+TGG + Chr4:3853881-3853900 None:intergenic 35.0%
!! CGAAGAATTGTGAGTTTTGT+TGG - Chr4:3853816-3853835 MsG0480018362.01.T01:CDS 35.0%
!! GTTCTAAAAAGTGAGTGGAA+TGG + Chr4:3853876-3853895 None:intergenic 35.0%
!! GTTGGTTTGTTGAAAAAGGA+TGG - Chr4:3853603-3853622 MsG0480018362.01.T01:CDS 35.0%
!! GTTTAGATCTATTGATGGTG+GGG - Chr4:3854163-3854182 MsG0480018362.01.T01:CDS 35.0%
!! TAGGGTTTTGATGCTTGTTT+GGG - Chr4:3853566-3853585 MsG0480018362.01.T01:CDS 35.0%
!! TTAGGGTTTTGATGCTTGTT+TGG - Chr4:3853565-3853584 MsG0480018362.01.T01:CDS 35.0%
!!! ACTTTTTTCTCACAGAGGAA+AGG - Chr4:3853282-3853301 MsG0480018362.01.T01:CDS 35.0%
!!! AGAATTGTGAGTTTTGTTGG+GGG - Chr4:3853819-3853838 MsG0480018362.01.T01:CDS 35.0%
!!! CGTATACTTTTTTCTCACAG+AGG - Chr4:3853277-3853296 MsG0480018362.01.T01:CDS 35.0%
ACAGATCAGGCAAAACATTG+AGG - Chr4:3852861-3852880 MsG0480018362.01.T01:CDS 40.0%
ACAGATCCTAAAAGCAAGCA+GGG + Chr4:3852038-3852057 None:intergenic 40.0%
AGTACCTTCAAAGAACTGTG+CGG + Chr4:3853655-3853674 None:intergenic 40.0%
ATAATGCCATGCGAAAACCA+TGG + Chr4:3855028-3855047 None:intergenic 40.0%
ATCTTCGAACCCTCTTGTAT+CGG + Chr4:3853174-3853193 None:intergenic 40.0%
ATGGTGAGGAAATTGATAGG+TGG - Chr4:3853121-3853140 MsG0480018362.01.T01:CDS 40.0%
CCCAATATTTGTCAGCAATC+TGG + Chr4:3855124-3855143 None:intergenic 40.0%
CCCACCATCTGTTACAAATT+AGG + Chr4:3852329-3852348 None:intergenic 40.0%
CCTAAAATACCACTTTCTGG+TGG - Chr4:3853354-3853373 MsG0480018362.01.T01:CDS 40.0%
CCTGTTGGAGCAACTTTAAT+CGG - Chr4:3853066-3853085 MsG0480018362.01.T01:CDS 40.0%
CTGTTACAAATTAGGCATGG+CGG + Chr4:3852321-3852340 None:intergenic 40.0%
GATGTACAAGGATATCGTTC+TGG - Chr4:3854556-3854575 MsG0480018362.01.T01:intron 40.0%
GTGAAAAGACTCGTACCATT+TGG + Chr4:3852992-3853011 None:intergenic 40.0%
TACTCATCACCAGAAGATTG+TGG - Chr4:3853755-3853774 MsG0480018362.01.T01:CDS 40.0%
TATGAGTAAGATTGAAGCCG+GGG - Chr4:3854430-3854449 MsG0480018362.01.T01:intron 40.0%
TATTTGACGTTCTTCTGCCT+TGG - Chr4:3854617-3854636 MsG0480018362.01.T01:intron 40.0%
TCGGGGAAAAATTCAAATCC+AGG + Chr4:3855242-3855261 None:intergenic 40.0%
TCGTAATCTGAATCAGGTTC+TGG + Chr4:3854689-3854708 None:intergenic 40.0%
TCTTGCCTTCTCCAAATCAA+TGG + Chr4:3852929-3852948 None:intergenic 40.0%
TCTTTACTTCCCGATTACCA+AGG + Chr4:3854637-3854656 None:intergenic 40.0%
TGAGCCACCTTAAAACTACA+TGG + Chr4:3852353-3852372 None:intergenic 40.0%
TGATCATCCGGAAATGTTAC+CGG + Chr4:3854122-3854141 None:intergenic 40.0%
TGGTGAGGAAATTGATAGGT+GGG - Chr4:3853122-3853141 MsG0480018362.01.T01:CDS 40.0%
TGTCTTGCAGCTAAATGGTA+GGG + Chr4:3854987-3855006 None:intergenic 40.0%
TTAACTTTGAGCAACGATGG+AGG - Chr4:3854030-3854049 MsG0480018362.01.T01:CDS 40.0%
TTACCAAGATTCTCATGTGC+CGG - Chr4:3853320-3853339 MsG0480018362.01.T01:CDS 40.0%
TTCGGTATAAACAGACCAAC+CGG + Chr4:3853457-3853476 None:intergenic 40.0%
TTCTATTATTCCTCCATCCC+CGG - Chr4:3854100-3854119 MsG0480018362.01.T01:CDS 40.0%
TTTCTTTGGTGAGGGATTCT+AGG - Chr4:3853478-3853497 MsG0480018362.01.T01:CDS 40.0%
! ATGGTTTTCGCATGGCATTA+TGG - Chr4:3855027-3855046 MsG0480018362.01.T01:intron 40.0%
! ATTGAGGAAACTGTTGGTCT+TGG - Chr4:3852877-3852896 MsG0480018362.01.T01:CDS 40.0%
! CCACCAGAAAGTGGTATTTT+AGG + Chr4:3853357-3853376 None:intergenic 40.0%
! CTTCTGGTGATGAGTAAACA+TGG + Chr4:3853751-3853770 None:intergenic 40.0%
! GCCTAATTTGTAACAGATGG+TGG - Chr4:3852325-3852344 MsG0480018362.01.T01:CDS 40.0%
! GCTATGACTTTAGCTGGTTT+AGG - Chr4:3855502-3855521 MsG0480018362.01.T01:exon 40.0%
! GTTGATAAGCTTAATGCTGG+TGG - Chr4:3851805-3851824 MsG0480018362.01.T01:three_prime_UTR 40.0%
! TCAGTGTTATCGATTGCAGA+TGG + Chr4:3852410-3852429 None:intergenic 40.0%
! TGAATCAGGTTCTGGTTGTT+CGG + Chr4:3854681-3854700 None:intergenic 40.0%
! TGATAGGTGGGTGGAAATTT+TGG - Chr4:3853134-3853153 MsG0480018362.01.T01:CDS 40.0%
!! GAAACTGTTGGTCTTGGAAA+GGG - Chr4:3852883-3852902 MsG0480018362.01.T01:CDS 40.0%
!! GAGGTTGATAAGCTTAATGC+TGG - Chr4:3851802-3851821 MsG0480018362.01.T01:three_prime_UTR 40.0%
!! TGCATCGGTTCAAGCAATAT+TGG - Chr4:3854508-3854527 MsG0480018362.01.T01:intron 40.0%
!! TGCTACCATTGATTTGGAGA+AGG - Chr4:3852921-3852940 MsG0480018362.01.T01:CDS 40.0%
AACAACACATCCCAAGCGAT+CGG + Chr4:3854011-3854030 None:intergenic 45.0%
AAGTAGTAAGGATAGGAGGG+AGG + Chr4:3855301-3855320 None:intergenic 45.0%
AATCACAAAAGGCGGTCCAA+GGG - Chr4:3853950-3853969 MsG0480018362.01.T01:CDS 45.0%
ACAGTGAATTACCTGGTGGA+AGG - Chr4:3853784-3853803 MsG0480018362.01.T01:CDS 45.0%
AGCTAAATGGTAGGGCTGAT+AGG + Chr4:3854979-3854998 None:intergenic 45.0%
AGCTGGGCTTATTAGTGGAA+AGG - Chr4:3854226-3854245 MsG0480018362.01.T01:CDS 45.0%
ATCATCCGGAAATGTTACCG+GGG + Chr4:3854120-3854139 None:intergenic 45.0%
ATGATGCTACCACCATCATC+AGG + Chr4:3853708-3853727 None:intergenic 45.0%
ATTGCAGCACCTGGAAAGTT+AGG + Chr4:3853933-3853952 None:intergenic 45.0%
CACAGATCCTAAAAGCAAGC+AGG + Chr4:3852039-3852058 None:intergenic 45.0%
CAGCATCTTCAGGAGTTTCT+GGG + Chr4:3854202-3854221 None:intergenic 45.0%
CCAACAGGTTTGCGAATGAT+CGG + Chr4:3852211-3852230 None:intergenic 45.0%
CCGATTAAAGTTGCTCCAAC+AGG + Chr4:3853069-3853088 None:intergenic 45.0%
CCTTCACTAGCAACTCCAAT+CGG + Chr4:3855203-3855222 None:intergenic 45.0%
CGGTTCAAGCAATATTGGAC+TGG - Chr4:3854513-3854532 MsG0480018362.01.T01:intron 45.0%
CTCACAGAGGAAAGGATGTA+AGG - Chr4:3853290-3853309 MsG0480018362.01.T01:CDS 45.0%
CTGTCTTGCAGCTAAATGGT+AGG + Chr4:3854988-3855007 None:intergenic 45.0%
CTTGAACCGATGCACTTTCT+GGG + Chr4:3854502-3854521 None:intergenic 45.0%
GAAACCGCACAGTTCTTTGA+AGG - Chr4:3853648-3853667 MsG0480018362.01.T01:CDS 45.0%
GATAAGCTTAATGCTGGTGG+TGG - Chr4:3851808-3851827 MsG0480018362.01.T01:three_prime_UTR 45.0%
GATCATCCGGAAATGTTACC+GGG + Chr4:3854121-3854140 None:intergenic 45.0%
GATTTGGAGAAGGCAAGAGT+GGG - Chr4:3852931-3852950 MsG0480018362.01.T01:CDS 45.0%
GCAAGACTTATCAGCCTCAT+CGG - Chr4:3853376-3853395 MsG0480018362.01.T01:CDS 45.0%
GCATTATGGTATGAGCACCT+TGG - Chr4:3855041-3855060 MsG0480018362.01.T01:intron 45.0%
GCTCTCTCGTAATCTGAATC+AGG + Chr4:3854695-3854714 None:intergenic 45.0%
GGATCACTGATGCATCAAAG+TGG - Chr4:3852011-3852030 MsG0480018362.01.T01:CDS 45.0%
GTTGTGGACAGTGAATTACC+TGG - Chr4:3853777-3853796 MsG0480018362.01.T01:CDS 45.0%
TAAGTCTTGCCACCAGAAAG+TGG + Chr4:3853366-3853385 None:intergenic 45.0%
TACCACCATCATCAGGATTG+CGG + Chr4:3853701-3853720 None:intergenic 45.0%
TATCCGGCACATGAGAATCT+TGG + Chr4:3853326-3853345 None:intergenic 45.0%
TCACCAGAAGATTGTGGTTG+TGG - Chr4:3853761-3853780 MsG0480018362.01.T01:CDS 45.0%
TCCAAGCAAAAGAGCTTCCA+AGG + Chr4:3854340-3854359 None:intergenic 45.0%
TCTTCGAACCCTCTTGTATC+GGG + Chr4:3853173-3853192 None:intergenic 45.0%
TGAATTACCTGGTGGAAGGT+CGG - Chr4:3853788-3853807 MsG0480018362.01.T01:CDS 45.0%
TGAGGAAATTGATAGGTGGG+TGG - Chr4:3853125-3853144 MsG0480018362.01.T01:CDS 45.0%
TGCTTCAGCACCTTACTCAT+TGG - Chr4:3852612-3852631 MsG0480018362.01.T01:CDS 45.0%
TGCTTTGCATCTCATCCCAA+AGG - Chr4:3854391-3854410 MsG0480018362.01.T01:intron 45.0%
TGGAGGAAATTTCCTCAGCA+TGG - Chr4:3851828-3851847 MsG0480018362.01.T01:three_prime_UTR 45.0%
TGGGATGATAGAACATCGGT+TGG - Chr4:3853585-3853604 MsG0480018362.01.T01:CDS 45.0%
TGTACGTTGTTGTCCCAATG+TGG - Chr4:3854465-3854484 MsG0480018362.01.T01:intron 45.0%
TGTCCACAACCACAATCTTC+TGG + Chr4:3853767-3853786 None:intergenic 45.0%
TTACAAATTAGGCATGGCGG+TGG + Chr4:3852318-3852337 None:intergenic 45.0%
TTCCATGTCTCGTGATCATC+CGG + Chr4:3854134-3854153 None:intergenic 45.0%
! CAGCAATCTGGTTCACCTTA+CGG + Chr4:3855112-3855131 None:intergenic 45.0%
! CGTTCTTCTGCCTTGGTAAT+CGG - Chr4:3854624-3854643 MsG0480018362.01.T01:intron 45.0%
! CTGGTGATGAGTAAACATGG+TGG + Chr4:3853748-3853767 None:intergenic 45.0%
! GTACACAGTGAACTTTTCCC+CGG + Chr4:3854450-3854469 None:intergenic 45.0%
! GTGTTATCGATTGCAGATGG+CGG + Chr4:3852407-3852426 None:intergenic 45.0%
! GTTCTTCTGCCTTGGTAATC+GGG - Chr4:3854625-3854644 MsG0480018362.01.T01:intron 45.0%
! TCAAGTCCATGGTTTTCGCA+TGG - Chr4:3855019-3855038 MsG0480018362.01.T01:intron 45.0%
! TCCTTGGAAGCTCTTTTGCT+TGG - Chr4:3854336-3854355 MsG0480018362.01.T01:CDS 45.0%
! TGAATTTTTCCCCGACACCA+AGG - Chr4:3855247-3855266 MsG0480018362.01.T01:intron 45.0%
! TGATTTGGAGAAGGCAAGAG+TGG - Chr4:3852930-3852949 MsG0480018362.01.T01:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+AGG + Chr4:3854380-3854399 None:intergenic 45.0%
! TTATCAGCCTCATCGGTGTT+GGG - Chr4:3853383-3853402 MsG0480018362.01.T01:CDS 45.0%
!! AAGCAATATTGGACTGGCAG+AGG - Chr4:3854519-3854538 MsG0480018362.01.T01:intron 45.0%
!! GGAAACTGTTGGTCTTGGAA+AGG - Chr4:3852882-3852901 MsG0480018362.01.T01:CDS 45.0%
!! TGATGGTGGTAGCATCATTC+AGG - Chr4:3853710-3853729 MsG0480018362.01.T01:CDS 45.0%
!!! GGACTTTTGGCTTTCTACCA+TGG - Chr4:3852380-3852399 MsG0480018362.01.T01:intron 45.0%
!!! GGCTCAAAATGACGGACTTT+TGG - Chr4:3852367-3852386 MsG0480018362.01.T01:intron 45.0%
!!! AAAAAAAAAAAAGAATATTT+TGG - Chr4:3851982-3852001 MsG0480018362.01.T01:CDS 5.0%
AAAGATCAATGGACGGAGCG+AGG - Chr4:3854931-3854950 MsG0480018362.01.T01:intron 50.0%
AACGATGGAGGAAGCAAGGT+GGG - Chr4:3854042-3854061 MsG0480018362.01.T01:CDS 50.0%
AAGATCAATGGACGGAGCGA+GGG - Chr4:3854932-3854951 MsG0480018362.01.T01:intron 50.0%
ACCACCATCATCAGGATTGC+GGG + Chr4:3853700-3853719 None:intergenic 50.0%
AGGAGTCATGAAGCATGCCA+AGG + Chr4:3855061-3855080 None:intergenic 50.0%
AGGATATCGTTCTGGCACTC+AGG - Chr4:3854564-3854583 MsG0480018362.01.T01:intron 50.0%
AGGGAATCGAGGAAGATCCT+CGG - Chr4:3854591-3854610 MsG0480018362.01.T01:intron 50.0%
ATATCCTCCCAACACCGATG+AGG + Chr4:3853393-3853412 None:intergenic 50.0%
ATGTCACGAAAGACCGCAGT+TGG - Chr4:3853217-3853236 MsG0480018362.01.T01:CDS 50.0%
ATGTCATGCCAAGGTTCCCT+TGG + Chr4:3853969-3853988 None:intergenic 50.0%
CAATCACAAAAGGCGGTCCA+AGG - Chr4:3853949-3853968 MsG0480018362.01.T01:CDS 50.0%
CACTTGCTTCGCTATCCGAT+TGG - Chr4:3855185-3855204 MsG0480018362.01.T01:intron 50.0%
CATGAAACGTCGGGACTGTT+GGG + Chr4:3854717-3854736 None:intergenic 50.0%
CCGATCATTCGCAAACCTGT+TGG - Chr4:3852208-3852227 MsG0480018362.01.T01:CDS 50.0%
CCGATTGGAGTTGCTAGTGA+AGG - Chr4:3855200-3855219 MsG0480018362.01.T01:intron 50.0%
CGGGAATGAATGTCATGCCA+AGG + Chr4:3853978-3853997 None:intergenic 50.0%
CTGGCTGTCTTGCAGCTAAA+TGG + Chr4:3854992-3855011 None:intergenic 50.0%
CTTATCAGCCTCATCGGTGT+TGG - Chr4:3853382-3853401 MsG0480018362.01.T01:CDS 50.0%
CTTTGGTGAGGGATTCTAGG+AGG - Chr4:3853481-3853500 MsG0480018362.01.T01:CDS 50.0%
GACATTCATTCCCGCCTTGA+AGG - Chr4:3853984-3854003 MsG0480018362.01.T01:CDS 50.0%
GCAGCATCTTCAGGAGTTTC+TGG + Chr4:3854203-3854222 None:intergenic 50.0%
GCTTGAACCGATGCACTTTC+TGG + Chr4:3854503-3854522 None:intergenic 50.0%
GGATATCGTTCTGGCACTCA+GGG - Chr4:3854565-3854584 MsG0480018362.01.T01:intron 50.0%
GTGGACAGTGAATTACCTGG+TGG - Chr4:3853780-3853799 MsG0480018362.01.T01:CDS 50.0%
TCATGAAACGTCGGGACTGT+TGG + Chr4:3854718-3854737 None:intergenic 50.0%
TCCATCCCCGGTAACATTTC+CGG - Chr4:3854112-3854131 MsG0480018362.01.T01:CDS 50.0%
TCGCTCCGTCCATTGATCTT+TGG + Chr4:3854932-3854951 None:intergenic 50.0%
TGTCACGAAAGACCGCAGTT+GGG - Chr4:3853218-3853237 MsG0480018362.01.T01:CDS 50.0%
TTCCGGATGATCACGAGACA+TGG - Chr4:3854129-3854148 MsG0480018362.01.T01:CDS 50.0%
! AAGAGCATATGTGCCTGTCG+AGG - Chr4:3853089-3853108 MsG0480018362.01.T01:CDS 50.0%
! ATTCTAGGAGGCCAAAGGCT+GGG - Chr4:3853493-3853512 MsG0480018362.01.T01:CDS 50.0%
! CCAGGTGCTGCAATCACAAA+AGG - Chr4:3853939-3853958 MsG0480018362.01.T01:CDS 50.0%
! CCTTTTGTGATTGCAGCACC+TGG + Chr4:3853942-3853961 None:intergenic 50.0%
! CTCTTTTGCTTGGAGTGGTG+AGG - Chr4:3854346-3854365 MsG0480018362.01.T01:CDS 50.0%
! GGAAGCTCTTTTGCTTGGAG+TGG - Chr4:3854341-3854360 MsG0480018362.01.T01:CDS 50.0%
! GGTGCTGCAATCACAAAAGG+CGG - Chr4:3853942-3853961 MsG0480018362.01.T01:CDS 50.0%
! TCAGGTTCTGGTTGTTCGGA+AGG + Chr4:3854677-3854696 None:intergenic 50.0%
!! AAGCTTAATGCTGGTGGTGG+AGG - Chr4:3851811-3851830 MsG0480018362.01.T01:three_prime_UTR 50.0%
!! AGGGACTCTGAGATAGCGAT+GGG - Chr4:3854951-3854970 MsG0480018362.01.T01:intron 50.0%
!! AGTGGACCCTGCTTGCTTTT+AGG - Chr4:3852029-3852048 MsG0480018362.01.T01:CDS 50.0%
!! GGTGGGGCCATGTAGTTTTA+AGG - Chr4:3852343-3852362 MsG0480018362.01.T01:CDS 50.0%
!!! ATTGATGGTGGGGCTGCTTT+TGG - Chr4:3854173-3854192 MsG0480018362.01.T01:CDS 50.0%
!!! GGGGCCATGTAGTTTTAAGG+TGG - Chr4:3852346-3852365 MsG0480018362.01.T01:CDS 50.0%
!!! TTGATGGTGGGGCTGCTTTT+GGG - Chr4:3854174-3854193 MsG0480018362.01.T01:CDS 50.0%
AAGCGATCGGTCCTTCAAGG+CGG + Chr4:3853998-3854017 None:intergenic 55.0%
ACTCAGGGCAAAGGGAATCG+AGG - Chr4:3854580-3854599 MsG0480018362.01.T01:intron 55.0%
AGCATATGTGCCTGTCGAGG+AGG - Chr4:3853092-3853111 MsG0480018362.01.T01:CDS 55.0%
AGCGAAGCAAGTGTCCAGGA+AGG + Chr4:3855178-3855197 None:intergenic 55.0%
ATGGAGGAAGCAAGGTGGGA+AGG - Chr4:3854046-3854065 MsG0480018362.01.T01:CDS 55.0%
CAACGATGGAGGAAGCAAGG+TGG - Chr4:3854041-3854060 MsG0480018362.01.T01:CDS 55.0%
CACCATCATCAGGATTGCGG+GGG + Chr4:3853698-3853717 None:intergenic 55.0%
CCACCATCATCAGGATTGCG+GGG + Chr4:3853699-3853718 None:intergenic 55.0%
CCATTCAAGACCTCCTCGAC+AGG + Chr4:3853105-3853124 None:intergenic 55.0%
CCTGTCGAGGAGGTCTTGAA+TGG - Chr4:3853102-3853121 MsG0480018362.01.T01:CDS 55.0%
CCTTGAAGGACCGATCGCTT+GGG - Chr4:3853998-3854017 MsG0480018362.01.T01:CDS 55.0%
CGAGGAGGTCTTGAATGGTG+AGG - Chr4:3853107-3853126 MsG0480018362.01.T01:CDS 55.0%
CTGAAGATGCTGCGAGAGCT+GGG - Chr4:3854210-3854229 MsG0480018362.01.T01:CDS 55.0%
GACACCAAGGCTCGGATTCT+CGG - Chr4:3855260-3855279 MsG0480018362.01.T01:intron 55.0%
GAGCAACGATGGAGGAAGCA+AGG - Chr4:3854038-3854057 MsG0480018362.01.T01:CDS 55.0%
GCGAGAGCTGGGCTTATTAG+TGG - Chr4:3854221-3854240 MsG0480018362.01.T01:CDS 55.0%
GCTGGGGGAGACACAACAAT+TGG - Chr4:3853510-3853529 MsG0480018362.01.T01:CDS 55.0%
GGAAATGTTACCGGGGATGG+AGG + Chr4:3854113-3854132 None:intergenic 55.0%
GGATAGCGAAGCAAGTGTCC+AGG + Chr4:3855182-3855201 None:intergenic 55.0%
GGTGGCCAAAAAATCCGCCA+TGG + Chr4:3852300-3852319 None:intergenic 55.0%
GTTCTGGCACTCAGGGCAAA+GGG - Chr4:3854572-3854591 MsG0480018362.01.T01:intron 55.0%
GTTGTCCCAATGTGGCCAGA+GGG - Chr4:3854473-3854492 MsG0480018362.01.T01:intron 55.0%
TCCGGAAATGTTACCGGGGA+TGG + Chr4:3854116-3854135 None:intergenic 55.0%
TGGAGAAGGCAAGAGTGGGA+AGG - Chr4:3852935-3852954 MsG0480018362.01.T01:CDS 55.0%
TGTTGTCCCAATGTGGCCAG+AGG - Chr4:3854472-3854491 MsG0480018362.01.T01:intron 55.0%
! GAGAATCCGAGCCTTGGTGT+CGG + Chr4:3855261-3855280 None:intergenic 55.0%
! GAGGGATTCTAGGAGGCCAA+AGG - Chr4:3853488-3853507 MsG0480018362.01.T01:CDS 55.0%
! GATTCTAGGAGGCCAAAGGC+TGG - Chr4:3853492-3853511 MsG0480018362.01.T01:CDS 55.0%
! GGACTGGCAGAGGAGAACAA+TGG - Chr4:3854529-3854548 MsG0480018362.01.T01:intron 55.0%
! GGGTGTCCCAGAAAGTGCAT+CGG - Chr4:3854493-3854512 MsG0480018362.01.T01:intron 55.0%
! TTCTAGGAGGCCAAAGGCTG+GGG - Chr4:3853494-3853513 MsG0480018362.01.T01:CDS 55.0%
! TTTTCCCCGACACCAAGGCT+CGG - Chr4:3855252-3855271 MsG0480018362.01.T01:intron 55.0%
!! AGAATCCGAGCCTTGGTGTC+GGG + Chr4:3855260-3855279 None:intergenic 55.0%
!! GAGGGACTCTGAGATAGCGA+TGG - Chr4:3854950-3854969 MsG0480018362.01.T01:intron 55.0%
!!! CAGCGCCATGGCGGATTTTT+TGG - Chr4:3852292-3852311 MsG0480018362.01.T01:CDS 55.0%
AAAGACCGCAGTTGGGCTCG+AGG - Chr4:3853225-3853244 MsG0480018362.01.T01:CDS 60.0%
AAGGCGGTCCAAGGGAACCT+TGG - Chr4:3853958-3853977 MsG0480018362.01.T01:CDS 60.0%
AATCCGCCATGGCGCTGCTA+TGG + Chr4:3852289-3852308 None:intergenic 60.0%
ACCAAGGCTCGGATTCTCGG+CGG - Chr4:3855263-3855282 MsG0480018362.01.T01:intron 60.0%
AGCGATCGGTCCTTCAAGGC+GGG + Chr4:3853997-3854016 None:intergenic 60.0%
CCAGCACGTGGTCAAGTCCA+TGG - Chr4:3855008-3855027 MsG0480018362.01.T01:intron 60.0%
CCAGCTCTCGCAGCATCTTC+AGG + Chr4:3854212-3854231 None:intergenic 60.0%
CCATGGACTTGACCACGTGC+TGG + Chr4:3855011-3855030 None:intergenic 60.0%
CCCAAGCGATCGGTCCTTCA+AGG + Chr4:3854001-3854020 None:intergenic 60.0%
CCTGAAGATGCTGCGAGAGC+TGG - Chr4:3854209-3854228 MsG0480018362.01.T01:CDS 60.0%
CGCTTATCCGACCTTCCACC+AGG + Chr4:3853798-3853817 None:intergenic 60.0%
CGTTCTGGCACTCAGGGCAA+AGG - Chr4:3854571-3854590 MsG0480018362.01.T01:intron 60.0%
GAATGCCTCGAGCCCAACTG+CGG + Chr4:3853233-3853252 None:intergenic 60.0%
GCCTTGAAGGACCGATCGCT+TGG - Chr4:3853997-3854016 MsG0480018362.01.T01:CDS 60.0%
GGACACCCTCTGGCCACATT+GGG + Chr4:3854481-3854500 None:intergenic 60.0%
GGAGATGTCACACAGCTGCC+TGG - Chr4:3855221-3855240 MsG0480018362.01.T01:intron 60.0%
GGGGGTCTCGACCTTTGTGA+TGG - Chr4:3853837-3853856 MsG0480018362.01.T01:CDS 60.0%
GTTGTGTCTCCCCCAGCCTT+TGG + Chr4:3853507-3853526 None:intergenic 60.0%
TCACTCGAGCACGACCTTCC+TGG - Chr4:3855161-3855180 MsG0480018362.01.T01:intron 60.0%
TCTAGGAGGCCAAAGGCTGG+GGG - Chr4:3853495-3853514 MsG0480018362.01.T01:CDS 60.0%
TGCCCCCGCAATCCTGATGA+TGG - Chr4:3853693-3853712 MsG0480018362.01.T01:CDS 60.0%
TGTCTGCCATAGCAGCGCCA+TGG - Chr4:3852280-3852299 MsG0480018362.01.T01:CDS 60.0%
!! CCCCGCAATCCTGATGATGG+TGG - Chr4:3853696-3853715 MsG0480018362.01.T01:CDS 60.0%
!! CGATTGCAGATGGCGGACCA+TGG + Chr4:3852400-3852419 None:intergenic 60.0%
!! GAATCCGAGCCTTGGTGTCG+GGG + Chr4:3855259-3855278 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+TGG + Chr4:3854491-3854510 None:intergenic 60.0%
!! TCAGCCTCATCGGTGTTGGG+AGG - Chr4:3853386-3853405 MsG0480018362.01.T01:CDS 60.0%
CTGCCATAGCAGCGCCATGG+CGG - Chr4:3852283-3852302 MsG0480018362.01.T01:CDS 65.0%
GCTGCAAGACAGCCAGCACG+TGG - Chr4:3854996-3855015 MsG0480018362.01.T01:intron 65.0%
GGGACACCCTCTGGCCACAT+TGG + Chr4:3854482-3854501 None:intergenic 65.0%
GCCGCCGAGAATCCGAGCCT+TGG + Chr4:3855267-3855286 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 3851748 3855521 3851748 ID=MsG0480018362.01;Name=MsG0480018362.01
Chr4 mRNA 3851748 3855521 3851748 ID=MsG0480018362.01.T01;Parent=MsG0480018362.01;Name=MsG0480018362.01.T01;_AED=0.20;_eAED=0.20;_QI=9|1|1|1|1|1|3|199|808
Chr4 exon 3851748 3852380 3851748 ID=MsG0480018362.01.T01:exon:1114;Parent=MsG0480018362.01.T01
Chr4 exon 3852505 3854404 3852505 ID=MsG0480018362.01.T01:exon:1113;Parent=MsG0480018362.01.T01
Chr4 exon 3855420 3855521 3855420 ID=MsG0480018362.01.T01:exon:1112;Parent=MsG0480018362.01.T01
Chr4 five_prime_UTR 3855513 3855521 3855513 ID=MsG0480018362.01.T01:five_prime_utr;Parent=MsG0480018362.01.T01
Chr4 CDS 3855420 3855512 3855420 ID=MsG0480018362.01.T01:cds;Parent=MsG0480018362.01.T01
Chr4 CDS 3852505 3854404 3852505 ID=MsG0480018362.01.T01:cds;Parent=MsG0480018362.01.T01
Chr4 CDS 3851947 3852380 3851947 ID=MsG0480018362.01.T01:cds;Parent=MsG0480018362.01.T01
Chr4 three_prime_UTR 3851748 3851946 3851748 ID=MsG0480018362.01.T01:three_prime_utr;Parent=MsG0480018362.01.T01
Gene Sequence

>MsG0480018362.01.T01

ATGGCACAAATTCATCTTCATGGTACTCTTCATGCTACTATCTATGAGGTTGATAAGCTTAATGCTGGTGGTGGAGGAAATTTCCTCAGCATGATCAGGCAAAACATTGAGGAAACTGTTGGTCTTGGAAAGGGAGTTACTAAACTCTATGCTACCATTGATTTGGAGAAGGCAAGAGTGGGAAGGACAAGAATTATTGAAAATGAGCATACTAATCCCAAATGGTACGAGTCTTTTCACATTTACTGTGCTCATATGGCTTCAGATATCATATTCACTGTGAAAGATGATAATCCTGTTGGAGCAACTTTAATCGGAAGAGCATATGTGCCTGTCGAGGAGGTCTTGAATGGTGAGGAAATTGATAGGTGGGTGGAAATTTTGGACACTGAAAAAAACCCGATACAAGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTTGATGTCACGAAAGACCGCAGTTGGGCTCGAGGCATTCAAAGCGCTAAATTTCCTGGAGTTCCGTATACTTTTTTCTCACAGAGGAAAGGATGTAAGGTATCTCTTTACCAAGATTCTCATGTGCCGGATAATTTCATCCCTAAAATACCACTTTCTGGTGGCAAGACTTATCAGCCTCATCGGTGTTGGGAGGATATTTATGATGCCATCACTAATGCAAAACACATGATATACATTACCGGTTGGTCTGTTTATACCGAAATTTCTTTGGTGAGGGATTCTAGGAGGCCAAAGGCTGGGGGAGACACAACAATTGGTGAGCTTCTAAAGAAAAAGTCTAGTGAAGGTGTTAGGGTTTTGATGCTTGTTTGGGATGATAGAACATCGGTTGGTTTGTTGAAAAAGGATGGTTTGATGGCTACTCATGACGAAGAAACCGCACAGTTCTTTGAAGGTACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGGTAGCATCATTCAGGATTTACAAGTTTCCACCATGTTTACTCATCACCAGAAGATTGTGGTTGTGGACAGTGAATTACCTGGTGGAAGGTCGGATAAGCGAAGAATTGTGAGTTTTGTTGGGGGTCTCGACCTTTGTGATGGAAGATATGATACTCCATTCCACTCACTTTTTAGAACTCTTGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCAGGTGCTGCAATCACAAAAGGCGGTCCAAGGGAACCTTGGCATGACATTCATTCCCGCCTTGAAGGACCGATCGCTTGGGATGTGTTGTTTAACTTTGAGCAACGATGGAGGAAGCAAGGTGGGAAGGATTTACTTGTCTCTCTAAGGGAGCTTGAAGATTCTATTATTCCTCCATCCCCGGTAACATTTCCGGATGATCACGAGACATGGAATGTTCAGCTGTTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCAGAAACTCCTGAAGATGCTGCGAGAGCTGGGCTTATTAGTGGAAAGGATAATATCATCGATCGTAGCATTCAAGATGCTTATATTAATGCTATTCGGCGTGCAAAGAACTTCATCTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGGTGAGGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTCATCCCAAAGGAACTTTCACTTAAGATTATGAGTAAGATTGAAGCCGGGGAAAAGTTCACTGTGTACGTTGTTGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCGGTTCAAGCAATATTGGACTGGCAGAGGAGAACAATGGAGATGATGTACAAGGATATCGTTCTGGCACTCAGGGCAAAGGGAATCGAGGAAGATCCTCGGAATTATTTGACGTTCTTCTGCCTTGGTAATCGGGAAGTAAAGAAACAAGGAGAGTATGAGCCTTCCGAACAACCAGAACCTGATTCAGATTACGAGAGAGCCCAACAGTCCCGACGTTTCATGATCTATGTTCATACCAAGATGATGATAGTTGATGACGAATACATAATCGTTGGATCTGCCAACATCAACCAAAGATCAATGGACGGAGCGAGGGACTCTGAGATAGCGATGGGAGCCTATCAGCCCTACCATTTAGCTGCAAGACAGCCAGCACGTGGTCAAGTCCATGGTTTTCGCATGGCATTATGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTTCATCCAGAAAATCAAGAATGTATCCGTAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCAAACGATTCACTCGAGCACGACCTTCCTGGACACTTGCTTCGCTATCCGATTGGAGTTGCTAGTGAAGGAGATGTCACACAGCTGCCTGGATTTGAATTTTTCCCCGACACCAAGGCTCGGATTCTCGGCGGCAAAGCTGATTACCTCCCTCCTATCCTTACTACTTAG

Protein sequence

>MsG0480018362.01.T01

MAQIHLHGTLHATIYEVDKLNAGGGGNFLSMIRQNIEETVGLGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHMASDIIFTVKDDNPVGATLIGRAYVPVEEVLNGEEIDRWVEILDTEKNPIQEGSKIHVKLQYFDVTKDRSWARGIQSAKFPGVPYTFFSQRKGCKVSLYQDSHVPDNFIPKIPLSGGKTYQPHRCWEDIYDAITNAKHMIYITGWSVYTEISLVRDSRRPKAGGDTTIGELLKKKSSEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFEGTDVHCVLCPRNPDDGGSIIQDLQVSTMFTHHQKIVVVDSELPGGRSDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVTFPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWSGEDIKPEDIGALHLIPKELSLKIMSKIEAGEKFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDIVLALRAKGIEEDPRNYLTFFCLGNREVKKQGEYEPSEQPEPDSDYERAQQSRRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQVHGFRMALWYEHLGMLHDSFLHPENQECIRKVNQIADKYWDLYSNDSLEHDLPGHLLRYPIGVASEGDVTQLPGFEFFPDTKARILGGKADYLPPILTT*