Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000871.01.T01 | XP_003588369.2 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 7.06E-174 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000871.01.T01 | O82316 | 78.776 | 245 | 52 | 0 | 1 | 245 | 1 | 245 | 8.22E-132 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000871.01.T01 | G7IB33 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 3.37e-174 | 488 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000871.01 | MsG0180002325.01 | 0.934486 | 3.751487e-96 | 2.840682e-91 |
| MsG0180000871.01 | MsG0780038399.01 | 0.850456 | 1.678552e-60 | 3.289912e-57 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000871.01.T01 | MTR_1g006490 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 8.55e-178 | 488 |
| MsG0180000871.01.T01 | MTR_1g006590 | 86.235 | 247 | 34 | 0 | 1 | 247 | 1 | 247 | 3.00e-156 | 434 |
| MsG0180000871.01.T01 | MTR_8g013680 | 57.661 | 248 | 99 | 3 | 1 | 243 | 1 | 247 | 5.43e-91 | 269 |
| MsG0180000871.01.T01 | MTR_2g101370 | 56.967 | 244 | 101 | 3 | 4 | 243 | 5 | 248 | 6.01e-89 | 263 |
| MsG0180000871.01.T01 | MTR_4g063090 | 54.008 | 237 | 105 | 2 | 1 | 233 | 3 | 239 | 9.36e-81 | 243 |
| MsG0180000871.01.T01 | MTR_7g103030 | 54.098 | 244 | 107 | 3 | 1 | 240 | 3 | 245 | 3.50e-79 | 239 |
| MsG0180000871.01.T01 | MTR_1g115405 | 51.250 | 240 | 112 | 3 | 3 | 238 | 5 | 243 | 9.01e-79 | 238 |
| MsG0180000871.01.T01 | MTR_7g023350 | 53.086 | 243 | 109 | 3 | 3 | 240 | 5 | 247 | 8.89e-78 | 235 |
| MsG0180000871.01.T01 | MTR_5g012810 | 53.012 | 249 | 109 | 4 | 1 | 244 | 1 | 246 | 2.18e-77 | 234 |
| MsG0180000871.01.T01 | MTR_1g077540 | 44.269 | 253 | 130 | 3 | 3 | 244 | 5 | 257 | 9.30e-70 | 215 |
| MsG0180000871.01.T01 | MTR_6g069040 | 44.400 | 250 | 131 | 3 | 3 | 244 | 5 | 254 | 6.09e-67 | 207 |
| MsG0180000871.01.T01 | MTR_2g060360 | 38.000 | 250 | 147 | 4 | 1 | 243 | 1 | 249 | 2.27e-49 | 163 |
| MsG0180000871.01.T01 | MTR_5g063930 | 34.874 | 238 | 142 | 7 | 14 | 247 | 32 | 260 | 2.02e-33 | 122 |
| MsG0180000871.01.T01 | MTR_2g017620 | 36.052 | 233 | 140 | 6 | 18 | 247 | 23 | 249 | 5.84e-31 | 115 |
| MsG0180000871.01.T01 | MTR_2g017620 | 36.052 | 233 | 140 | 6 | 18 | 247 | 37 | 263 | 1.13e-30 | 115 |
| MsG0180000871.01.T01 | MTR_7g101190 | 33.878 | 245 | 141 | 7 | 9 | 234 | 29 | 271 | 2.41e-30 | 114 |
| MsG0180000871.01.T01 | MTR_2g094270 | 34.008 | 247 | 135 | 9 | 11 | 234 | 32 | 273 | 6.13e-30 | 113 |
| MsG0180000871.01.T01 | MTR_4g006730 | 37.073 | 205 | 109 | 7 | 24 | 220 | 80 | 272 | 1.25e-29 | 113 |
| MsG0180000871.01.T01 | MTR_3g118010 | 34.335 | 233 | 130 | 8 | 19 | 234 | 37 | 263 | 4.21e-29 | 111 |
| MsG0180000871.01.T01 | MTR_2g104940 | 37.073 | 205 | 109 | 7 | 24 | 220 | 85 | 277 | 4.89e-29 | 111 |
| MsG0180000871.01.T01 | MTR_1g097840 | 35.841 | 226 | 126 | 7 | 19 | 237 | 74 | 287 | 3.04e-28 | 109 |
| MsG0180000871.01.T01 | MTR_4g415300 | 35.088 | 228 | 126 | 7 | 19 | 229 | 56 | 278 | 6.32e-28 | 108 |
| MsG0180000871.01.T01 | MTR_5g079570 | 36.522 | 230 | 137 | 7 | 18 | 245 | 39 | 261 | 8.05e-28 | 107 |
| MsG0180000871.01.T01 | MTR_5g010150 | 34.199 | 231 | 125 | 7 | 19 | 229 | 52 | 275 | 1.17e-27 | 107 |
| MsG0180000871.01.T01 | MTR_2g017590 | 34.335 | 233 | 144 | 6 | 18 | 247 | 35 | 261 | 2.95e-27 | 105 |
| MsG0180000871.01.T01 | MTR_4g059390 | 33.992 | 253 | 128 | 12 | 10 | 234 | 30 | 271 | 3.63e-27 | 106 |
| MsG0180000871.01.T01 | MTR_4g006630 | 36.548 | 197 | 105 | 7 | 32 | 220 | 1 | 185 | 1.31e-26 | 103 |
| MsG0180000871.01.T01 | MTR_4g006730 | 36.548 | 197 | 105 | 7 | 32 | 220 | 1 | 185 | 1.38e-26 | 103 |
| MsG0180000871.01.T01 | MTR_3g008920 | 37.327 | 217 | 127 | 7 | 18 | 232 | 25 | 234 | 1.95e-26 | 103 |
| MsG0180000871.01.T01 | MTR_8g098375 | 32.900 | 231 | 128 | 7 | 19 | 229 | 52 | 275 | 4.27e-26 | 103 |
| MsG0180000871.01.T01 | MTR_2g017660 | 33.621 | 232 | 138 | 9 | 18 | 244 | 38 | 258 | 1.84e-25 | 101 |
| MsG0180000871.01.T01 | MTR_5g082070 | 35.135 | 222 | 125 | 7 | 19 | 224 | 55 | 273 | 2.80e-25 | 101 |
| MsG0180000871.01.T01 | MTR_3g070210 | 32.895 | 228 | 138 | 6 | 11 | 224 | 47 | 273 | 4.46e-25 | 100 |
| MsG0180000871.01.T01 | MTR_1g095070 | 34.737 | 190 | 100 | 6 | 62 | 235 | 24 | 205 | 3.12e-24 | 97.1 |
| MsG0180000871.01.T01 | MTR_7g010650 | 34.906 | 212 | 130 | 5 | 19 | 228 | 37 | 242 | 2.49e-23 | 95.9 |
| MsG0180000871.01.T01 | MTR_8g087710 | 33.023 | 215 | 135 | 6 | 18 | 229 | 38 | 246 | 3.62e-23 | 95.5 |
| MsG0180000871.01.T01 | MTR_4g084880 | 33.182 | 220 | 130 | 6 | 18 | 229 | 34 | 244 | 4.50e-23 | 95.1 |
| MsG0180000871.01.T01 | MTR_8g087720 | 32.558 | 215 | 136 | 6 | 18 | 229 | 37 | 245 | 9.88e-23 | 94.0 |
| MsG0180000871.01.T01 | MTR_2g017610 | 32.143 | 224 | 136 | 7 | 7 | 220 | 19 | 236 | 2.65e-22 | 92.8 |
| MsG0180000871.01.T01 | MTR_2g017620 | 35.359 | 181 | 111 | 4 | 69 | 247 | 6 | 182 | 6.44e-22 | 90.1 |
| MsG0180000871.01.T01 | MTR_1g070385 | 30.769 | 221 | 144 | 6 | 19 | 237 | 62 | 275 | 6.64e-22 | 94.7 |
| MsG0180000871.01.T01 | MTR_2g017570 | 31.696 | 224 | 137 | 7 | 7 | 220 | 19 | 236 | 1.42e-21 | 90.9 |
| MsG0180000871.01.T01 | MTR_2g094270 | 32.735 | 223 | 123 | 8 | 11 | 210 | 32 | 250 | 8.62e-21 | 88.6 |
| MsG0180000871.01.T01 | MTR_4g006730 | 36.471 | 170 | 88 | 7 | 24 | 185 | 80 | 237 | 4.36e-17 | 78.6 |
| MsG0180000871.01.T01 | MTR_4g075570 | 27.481 | 262 | 157 | 8 | 10 | 247 | 42 | 294 | 5.63e-17 | 79.3 |
| MsG0180000871.01.T01 | MTR_4g075590 | 30.000 | 260 | 150 | 9 | 10 | 245 | 28 | 279 | 8.78e-17 | 78.6 |
| MsG0180000871.01.T01 | MTR_3g070210 | 30.622 | 209 | 130 | 6 | 19 | 213 | 55 | 262 | 8.81e-17 | 78.2 |
| MsG0180000871.01.T01 | MTR_1g095070 | 32.727 | 165 | 89 | 5 | 62 | 210 | 24 | 182 | 3.98e-15 | 72.0 |
| MsG0180000871.01.T01 | MTR_1g097840 | 34.483 | 174 | 96 | 6 | 19 | 185 | 74 | 236 | 8.47e-15 | 72.4 |
| MsG0180000871.01.T01 | MTR_4g415300 | 34.615 | 156 | 87 | 5 | 19 | 164 | 56 | 206 | 5.67e-14 | 69.3 |
| MsG0180000871.01.T01 | MTR_5g010150 | 33.333 | 159 | 86 | 5 | 19 | 164 | 52 | 203 | 1.26e-13 | 68.2 |
| MsG0180000871.01.T01 | MTR_4g059390 | 33.523 | 176 | 86 | 9 | 10 | 164 | 30 | 195 | 3.41e-13 | 66.6 |
| MsG0180000871.01.T01 | MTR_8g098375 | 30.409 | 171 | 99 | 5 | 19 | 176 | 52 | 215 | 1.91e-12 | 65.1 |
| MsG0180000871.01.T01 | MTR_3g070210 | 30.719 | 153 | 98 | 4 | 19 | 164 | 55 | 206 | 1.83e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000871.01.T01 | AT2G25810 | 78.776 | 245 | 52 | 0 | 1 | 245 | 1 | 245 | 8.39e-133 | 375 |
| MsG0180000871.01.T01 | AT3G16240 | 56.098 | 246 | 101 | 4 | 1 | 240 | 1 | 245 | 6.36e-90 | 266 |
| MsG0180000871.01.T01 | AT2G36830 | 55.328 | 244 | 105 | 2 | 1 | 240 | 3 | 246 | 1.74e-89 | 265 |
| MsG0180000871.01.T01 | AT3G26520 | 55.128 | 234 | 101 | 2 | 7 | 236 | 10 | 243 | 2.66e-84 | 252 |
| MsG0180000871.01.T01 | AT5G47450 | 53.975 | 239 | 106 | 2 | 1 | 235 | 1 | 239 | 6.94e-83 | 248 |
| MsG0180000871.01.T01 | AT4G01470 | 51.417 | 247 | 115 | 3 | 3 | 244 | 5 | 251 | 2.29e-80 | 242 |
| MsG0180000871.01.T01 | AT4G17340 | 54.583 | 240 | 103 | 2 | 1 | 235 | 1 | 239 | 6.59e-79 | 238 |
| MsG0180000871.01.T01 | AT1G73190 | 48.638 | 257 | 114 | 3 | 6 | 244 | 11 | 267 | 7.07e-74 | 226 |
| MsG0180000871.01.T01 | AT1G17810 | 49.383 | 243 | 114 | 2 | 6 | 239 | 11 | 253 | 2.84e-70 | 217 |
| MsG0180000871.01.T01 | AT3G47440 | 42.009 | 219 | 122 | 3 | 16 | 230 | 20 | 237 | 1.07e-49 | 164 |
| MsG0180000871.01.T01 | AT2G37170 | 33.745 | 243 | 131 | 8 | 11 | 229 | 29 | 265 | 6.93e-31 | 115 |
| MsG0180000871.01.T01 | AT5G60660 | 34.746 | 236 | 132 | 8 | 19 | 235 | 39 | 271 | 7.53e-31 | 116 |
| MsG0180000871.01.T01 | AT2G37170 | 33.745 | 243 | 131 | 8 | 11 | 229 | 72 | 308 | 7.63e-31 | 117 |
| MsG0180000871.01.T01 | AT4G35100 | 35.776 | 232 | 128 | 9 | 19 | 234 | 38 | 264 | 8.03e-31 | 115 |
| MsG0180000871.01.T01 | AT4G35100 | 35.776 | 232 | 128 | 9 | 19 | 234 | 38 | 264 | 8.03e-31 | 115 |
| MsG0180000871.01.T01 | AT2G37180 | 34.440 | 241 | 134 | 8 | 10 | 229 | 28 | 265 | 1.06e-30 | 115 |
| MsG0180000871.01.T01 | AT3G54820 | 33.913 | 230 | 132 | 6 | 19 | 229 | 38 | 266 | 5.97e-30 | 113 |
| MsG0180000871.01.T01 | AT3G53420 | 34.348 | 230 | 131 | 7 | 19 | 229 | 39 | 267 | 2.43e-29 | 112 |
| MsG0180000871.01.T01 | AT3G53420 | 34.348 | 230 | 131 | 7 | 19 | 229 | 39 | 267 | 2.43e-29 | 112 |
| MsG0180000871.01.T01 | AT1G80760 | 36.364 | 209 | 115 | 6 | 19 | 220 | 80 | 277 | 2.89e-29 | 112 |
| MsG0180000871.01.T01 | AT2G39010 | 33.473 | 239 | 139 | 7 | 10 | 229 | 29 | 266 | 4.41e-29 | 111 |
| MsG0180000871.01.T01 | AT2G16850 | 34.483 | 232 | 131 | 9 | 19 | 234 | 36 | 262 | 8.36e-29 | 110 |
| MsG0180000871.01.T01 | AT4G00430 | 35.683 | 227 | 126 | 8 | 19 | 229 | 53 | 275 | 7.14e-28 | 108 |
| MsG0180000871.01.T01 | AT4G19030 | 36.199 | 221 | 127 | 7 | 18 | 229 | 54 | 269 | 1.62e-27 | 107 |
| MsG0180000871.01.T01 | AT4G10380 | 33.913 | 230 | 132 | 7 | 14 | 234 | 71 | 289 | 7.60e-27 | 105 |
| MsG0180000871.01.T01 | AT1G01620 | 34.802 | 227 | 128 | 8 | 19 | 229 | 52 | 274 | 7.72e-27 | 105 |
| MsG0180000871.01.T01 | AT4G23400 | 34.375 | 224 | 133 | 6 | 19 | 229 | 53 | 275 | 1.47e-26 | 104 |
| MsG0180000871.01.T01 | AT2G45960 | 36.000 | 225 | 118 | 8 | 19 | 224 | 52 | 269 | 4.08e-26 | 103 |
| MsG0180000871.01.T01 | AT3G61430 | 36.000 | 225 | 118 | 8 | 19 | 224 | 52 | 269 | 4.53e-26 | 103 |
| MsG0180000871.01.T01 | AT3G61430 | 36.000 | 225 | 118 | 8 | 19 | 224 | 52 | 269 | 4.53e-26 | 103 |
| MsG0180000871.01.T01 | AT5G37820 | 37.004 | 227 | 123 | 9 | 19 | 237 | 43 | 257 | 7.05e-26 | 102 |
| MsG0180000871.01.T01 | AT5G37820 | 36.522 | 230 | 125 | 9 | 19 | 240 | 79 | 295 | 9.60e-26 | 103 |
| MsG0180000871.01.T01 | AT4G18910 | 36.036 | 222 | 126 | 7 | 18 | 229 | 51 | 266 | 1.16e-25 | 102 |
| MsG0180000871.01.T01 | AT1G31885 | 36.321 | 212 | 121 | 7 | 18 | 220 | 42 | 248 | 1.10e-24 | 100 |
| MsG0180000871.01.T01 | AT5G37810 | 35.371 | 229 | 126 | 8 | 12 | 229 | 33 | 250 | 1.24e-24 | 99.4 |
| MsG0180000871.01.T01 | AT1G52180 | 51.163 | 86 | 42 | 0 | 125 | 210 | 39 | 124 | 3.73e-23 | 91.3 |
| MsG0180000871.01.T01 | AT1G01620 | 34.066 | 182 | 102 | 6 | 62 | 229 | 25 | 202 | 2.07e-22 | 92.0 |
| MsG0180000871.01.T01 | AT1G31885 | 35.176 | 199 | 115 | 7 | 31 | 220 | 1 | 194 | 1.15e-19 | 85.9 |
| MsG0180000871.01.T01 | AT2G45960 | 33.649 | 211 | 114 | 8 | 19 | 210 | 52 | 255 | 7.43e-18 | 80.9 |
| MsG0180000871.01.T01 | AT3G06100 | 30.374 | 214 | 144 | 5 | 18 | 230 | 45 | 254 | 9.90e-18 | 80.5 |
| MsG0180000871.01.T01 | AT2G45960 | 33.649 | 211 | 114 | 8 | 19 | 210 | 52 | 255 | 1.18e-17 | 80.9 |
| MsG0180000871.01.T01 | AT2G34390 | 30.769 | 221 | 138 | 7 | 18 | 229 | 47 | 261 | 1.78e-17 | 80.1 |
| MsG0180000871.01.T01 | AT3G06100 | 31.250 | 208 | 138 | 5 | 24 | 230 | 3 | 206 | 2.77e-17 | 78.6 |
| MsG0180000871.01.T01 | AT2G34390 | 30.734 | 218 | 136 | 7 | 21 | 229 | 8 | 219 | 1.59e-16 | 76.6 |
| MsG0180000871.01.T01 | AT4G00430 | 35.484 | 155 | 87 | 6 | 19 | 164 | 53 | 203 | 6.62e-14 | 68.9 |
| MsG0180000871.01.T01 | AT2G39010 | 32.335 | 167 | 100 | 5 | 10 | 164 | 29 | 194 | 9.40e-14 | 68.9 |
| MsG0180000871.01.T01 | AT4G19030 | 34.483 | 174 | 100 | 7 | 18 | 182 | 54 | 222 | 1.87e-13 | 67.8 |
| MsG0180000871.01.T01 | AT4G19030 | 33.553 | 152 | 91 | 5 | 18 | 161 | 54 | 203 | 4.13e-12 | 64.3 |
| MsG0180000871.01.T01 | AT4G18910 | 34.831 | 178 | 100 | 7 | 18 | 185 | 51 | 222 | 6.18e-12 | 63.5 |
Find 83 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGCAAGTGCTCCTTTCTT+TGG | 0.189370 | 1:+12412678 | None:intergenic |
| ACCTTTCTCTTTGTCTTTGC+TGG | 0.204008 | 1:-12413648 | MsG0180000871.01.T01:CDS |
| GGACTGATCATTGGGTTTAT+TGG | 0.222150 | 1:-12412536 | MsG0180000871.01.T01:CDS |
| ATGAACCCTGCAAGATCTTT+TGG | 0.224227 | 1:-12412582 | MsG0180000871.01.T01:CDS |
| CTGCTTTGGTTAGTGGAAAT+TGG | 0.234876 | 1:-12412557 | MsG0180000871.01.T01:CDS |
| GGTTGTTCCTAACGCAATTT+TGG | 0.235450 | 1:+12413725 | None:intergenic |
| TATTGGGTTGGACCACTTAT+TGG | 0.235959 | 1:-12412519 | MsG0180000871.01.T01:CDS |
| GGCCTGGGCCCAACCTTAGT+TGG | 0.240880 | 1:-12412657 | MsG0180000871.01.T01:CDS |
| CTCTTTGTCTTTGCTGGTGT+TGG | 0.290840 | 1:-12413642 | MsG0180000871.01.T01:CDS |
| TTGAATCCCGCCGTGACTTT+GGG | 0.304849 | 1:-12413290 | MsG0180000871.01.T01:CDS |
| TTTGAATCCCGCCGTGACTT+TGG | 0.311719 | 1:-12413291 | MsG0180000871.01.T01:CDS |
| GACTGATCATTGGGTTTATT+GGG | 0.313313 | 1:-12412535 | MsG0180000871.01.T01:CDS |
| CTTATTGGTGGTGGACTTGC+TGG | 0.315006 | 1:-12412504 | MsG0180000871.01.T01:CDS |
| TTTGGGCCTGCTTTGGTTAG+TGG | 0.316883 | 1:-12412564 | MsG0180000871.01.T01:CDS |
| CTTAGTTGGGTTTGTGGTGG+GGG | 0.319883 | 1:-12412643 | MsG0180000871.01.T01:CDS |
| GCCTGGGCCCAACCTTAGTT+GGG | 0.322309 | 1:-12412656 | MsG0180000871.01.T01:CDS |
| ACCTTAGTTGGGTTTGTGGT+GGG | 0.325499 | 1:-12412645 | MsG0180000871.01.T01:CDS |
| ATCTCCGCCGCTCATATTTC+CGG | 0.326476 | 1:-12413320 | MsG0180000871.01.T01:CDS |
| GGGGCTAACATCCTTGCTGG+TGG | 0.334049 | 1:-12412624 | MsG0180000871.01.T01:CDS |
| TCGTTCGTTCGATCCTATAT+TGG | 0.337543 | 1:-12413241 | MsG0180000871.01.T01:CDS |
| CCCAACCTTAGTTGGGTTTG+TGG | 0.338677 | 1:-12412649 | MsG0180000871.01.T01:CDS |
| TATCTTCTTCATTATCTCTC+TGG | 0.355133 | 1:-12413185 | MsG0180000871.01.T01:CDS |
| GAAAGGAGCACTTGCTGGCC+TGG | 0.355522 | 1:-12412673 | MsG0180000871.01.T01:CDS |
| GGGCTAACATCCTTGCTGGT+GGG | 0.361838 | 1:-12412623 | MsG0180000871.01.T01:CDS |
| GGTACACTCAAGGAGTAGTT+TGG | 0.375382 | 1:-12412755 | MsG0180000871.01.T01:CDS |
| GTGGAAATTGGACTGATCAT+TGG | 0.389374 | 1:-12412545 | MsG0180000871.01.T01:CDS |
| TCAATTGGTCAATCCAATAT+AGG | 0.391166 | 1:+12413228 | None:intergenic |
| TGGAAATTGGACTGATCATT+GGG | 0.400779 | 1:-12412544 | MsG0180000871.01.T01:CDS |
| TCATTATCTCTCTGGTGGAT+TGG | 0.401572 | 1:-12413177 | MsG0180000871.01.T01:intron |
| CCAAAGAAAGGAGCACTTGC+TGG | 0.403446 | 1:-12412678 | MsG0180000871.01.T01:CDS |
| GTGACTTTGGGCCTCCTTGT+CGG | 0.411926 | 1:-12413278 | MsG0180000871.01.T01:CDS |
| CCTTAGTTGGGTTTGTGGTG+GGG | 0.413230 | 1:-12412644 | MsG0180000871.01.T01:CDS |
| AAAGGAGCACTTGCTGGCCT+GGG | 0.419186 | 1:-12412672 | MsG0180000871.01.T01:CDS |
| GGCTAACATCCTTGCTGGTG+GGG | 0.419242 | 1:-12412622 | MsG0180000871.01.T01:CDS |
| AACCTTAGTTGGGTTTGTGG+TGG | 0.423963 | 1:-12412646 | MsG0180000871.01.T01:CDS |
| ATCAGGCTGAGTAGCCTCTC+TGG | 0.431188 | 1:+12413704 | None:intergenic |
| GCTAAGTGGAGATGCCTTAG+TGG | 0.435457 | 1:-12413390 | MsG0180000871.01.T01:CDS |
| GCAGGCCCAAAAGATCTTGC+AGG | 0.436765 | 1:+12412576 | None:intergenic |
| GATCATTGGGTTTATTGGGT+TGG | 0.446033 | 1:-12412531 | MsG0180000871.01.T01:CDS |
| GTTGGACCACTTATTGGTGG+TGG | 0.458421 | 1:-12412513 | MsG0180000871.01.T01:CDS |
| CTTCTTCATTATCTCTCTGG+TGG | 0.466813 | 1:-12413182 | MsG0180000871.01.T01:CDS |
| CATACACTTGCAAGTGGAGT+AGG | 0.467366 | 1:-12412777 | MsG0180000871.01.T01:CDS |
| GTTGGTTCTGCAATGACTGC+TGG | 0.491784 | 1:-12413624 | MsG0180000871.01.T01:intron |
| AAGTCACGGCGGGATTCAAA+TGG | 0.491922 | 1:+12413294 | None:intergenic |
| GTACACTCAAGGAGTAGTTT+GGG | 0.493061 | 1:-12412754 | MsG0180000871.01.T01:CDS |
| TGGGTTGGACCACTTATTGG+TGG | 0.496312 | 1:-12412516 | MsG0180000871.01.T01:CDS |
| ACCACAAACCCAACTAAGGT+TGG | 0.497042 | 1:+12412648 | None:intergenic |
| GGCTATTGCACATGCTCTTG+TGG | 0.499860 | 1:-12413354 | MsG0180000871.01.T01:CDS |
| CAGCTGCAGATGCTATCAAT+TGG | 0.500751 | 1:+12413213 | None:intergenic |
| ATTAGAGCTTGAATGCAATC+AGG | 0.503619 | 1:+12413687 | None:intergenic |
| CCACAAACCCAACTAAGGTT+GGG | 0.515362 | 1:+12412649 | None:intergenic |
| CCCCACCACAAACCCAACTA+AGG | 0.515431 | 1:+12412644 | None:intergenic |
| TCCTTTCTTTGGATCAACCA+TGG | 0.517654 | 1:+12412689 | None:intergenic |
| GACAAGGAGGCCCAAAGTCA+CGG | 0.542123 | 1:+12413280 | None:intergenic |
| ATTTCAATAGATAAGCTAAG+TGG | 0.542575 | 1:-12413404 | MsG0180000871.01.T01:intron |
| ACCATGGTTGATCCAAAGAA+AGG | 0.549142 | 1:-12412690 | MsG0180000871.01.T01:CDS |
| GCAAGTCCACCACCAATAAG+TGG | 0.551655 | 1:+12412507 | None:intergenic |
| CAATTTCCACTAACCAAAGC+AGG | 0.552637 | 1:+12412558 | None:intergenic |
| AGGAGGCCCAAAGTCACGGC+GGG | 0.557990 | 1:+12413284 | None:intergenic |
| ACCAGCAAAGACAAAGAGAA+AGG | 0.561490 | 1:+12413647 | None:intergenic |
| ACCATGGCCAAAATTGCGTT+AGG | 0.563591 | 1:-12413732 | MsG0180000871.01.T01:CDS |
| CCACTTGCAAGTGTATGAGC+TGG | 0.565802 | 1:+12412783 | None:intergenic |
| CCAGCTCATACACTTGCAAG+TGG | 0.572996 | 1:-12412783 | MsG0180000871.01.T01:CDS |
| CTTTCTTCATCTACAACTAG+AGG | 0.584705 | 1:+12412441 | None:intergenic |
| ACCCAACTAAGGTTGGGCCC+AGG | 0.593749 | 1:+12412655 | None:intergenic |
| CTAAGTGGAGATGCCTTAGT+GGG | 0.595922 | 1:-12413389 | MsG0180000871.01.T01:CDS |
| GGCGGGATTCAAATGGCCAC+CGG | 0.596177 | 1:+12413301 | None:intergenic |
| ACTTTGGGCCTCCTTGTCGG+AGG | 0.600598 | 1:-12413275 | MsG0180000871.01.T01:CDS |
| ATACACTTGCAAGTGGAGTA+GGG | 0.603588 | 1:-12412776 | MsG0180000871.01.T01:CDS |
| TCTTGCAGGGTTCATTGAAG+CGG | 0.607315 | 1:+12412590 | None:intergenic |
| GTTCACTGTGTATGCAACCA+TGG | 0.609878 | 1:-12412706 | MsG0180000871.01.T01:CDS |
| CAGGCCCAAAAGATCTTGCA+GGG | 0.619708 | 1:+12412577 | None:intergenic |
| TATTGCACATGCTCTTGTGG+TGG | 0.628052 | 1:-12413351 | MsG0180000871.01.T01:CDS |
| TCCGCCGCTCATATTTCCGG+TGG | 0.641948 | 1:-12413317 | MsG0180000871.01.T01:CDS |
| ACATTGCAAATCAGAAACCA+TGG | 0.654147 | 1:-12413748 | MsG0180000871.01.T01:exon |
| AGCAAAGACAAAGAGAAAGG+TGG | 0.654285 | 1:+12413650 | None:intergenic |
| TAGTTATGTGACCTCCGACA+AGG | 0.657530 | 1:+12413264 | None:intergenic |
| AGTGGAGTAGGGTACACTCA+AGG | 0.668556 | 1:-12412765 | MsG0180000871.01.T01:CDS |
| GCCACCGGAAATATGAGCGG+CGG | 0.678011 | 1:+12413316 | None:intergenic |
| TGCGTTAGGAACAACCAGAG+AGG | 0.706593 | 1:-12413718 | MsG0180000871.01.T01:CDS |
| ATGGCCACCGGAAATATGAG+CGG | 0.716960 | 1:+12413313 | None:intergenic |
| TTATGTGACCTCCGACAAGG+AGG | 0.729011 | 1:+12413267 | None:intergenic |
| AAGGAGGCCCAAAGTCACGG+CGG | 0.732640 | 1:+12413283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTTATTTATCTAC+CGG | + | Chr1:12413769-12413788 | None:intergenic | 10.0% |
| !!! | TATTTTTCAATTTTATTGTA+TGG | + | Chr1:12413163-12413182 | None:intergenic | 10.0% |
| !! | TGTAATAAATGTAATATTTG+AGG | - | Chr1:12413044-12413063 | MsG0180000871.01.T01:intron | 15.0% |
| !!! | AAATATTCTTGCTTTTTAAA+GGG | - | Chr1:12413194-12413213 | MsG0180000871.01.T01:CDS | 15.0% |
| !!! | ATTTTTAAGGTACAAAAAAT+TGG | - | Chr1:12413007-12413026 | MsG0180000871.01.T01:intron | 15.0% |
| !!! | CAAAACAATTTGATTTTAAA+AGG | - | Chr1:12413069-12413088 | MsG0180000871.01.T01:intron | 15.0% |
| !!! | CTTTTAAAATCAAATTGTTT+TGG | + | Chr1:12413071-12413090 | None:intergenic | 15.0% |
| !!! | TATATTTTTATTTATCTACC+GGG | + | Chr1:12413768-12413787 | None:intergenic | 15.0% |
| !!! | TTTTTAAGGTACAAAAAATT+GGG | - | Chr1:12413008-12413027 | MsG0180000871.01.T01:intron | 15.0% |
| !! | ACATTTCAATTCAAATAACA+TGG | + | Chr1:12412593-12412612 | None:intergenic | 20.0% |
| !! | AGCTACTAAAAATTAAGATT+AGG | - | Chr1:12413673-12413692 | MsG0180000871.01.T01:CDS | 20.0% |
| !! | ATCTATTGAAATAAATTCCA+AGG | + | Chr1:12412681-12412700 | None:intergenic | 20.0% |
| !! | CAACAATAAAAGACAAAAAA+AGG | + | Chr1:12413233-12413252 | None:intergenic | 20.0% |
| !! | CATTTCAATTCAAATAACAT+GGG | + | Chr1:12412592-12412611 | None:intergenic | 20.0% |
| !!! | AACAATTTGATTTTAAAAGG+AGG | - | Chr1:12413072-12413091 | MsG0180000871.01.T01:intron | 20.0% |
| !!! | CAAAAATTACCACTTTTTTT+AGG | - | Chr1:12412972-12412991 | MsG0180000871.01.T01:intron | 20.0% |
| !!! | CAAATATTCTTGCTTTTTAA+AGG | - | Chr1:12413193-12413212 | MsG0180000871.01.T01:CDS | 20.0% |
| !!! | CTAAAAAAAGTGGTAATTTT+TGG | + | Chr1:12412974-12412993 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGTCTTTTATTGT+TGG | - | Chr1:12413231-12413250 | MsG0180000871.01.T01:CDS | 20.0% |
| !!! | GTTACAAATCATCATTTTTA+AGG | - | Chr1:12412994-12413013 | MsG0180000871.01.T01:intron | 20.0% |
| !!! | TCAATTTTATTGTATGGATA+AGG | + | Chr1:12413157-12413176 | None:intergenic | 20.0% |
| ! | ATAACATGGGATGAAATTAA+TGG | + | Chr1:12412579-12412598 | None:intergenic | 25.0% |
| ! | ATTTCAATAGATAAGCTAAG+TGG | - | Chr1:12412689-12412708 | MsG0180000871.01.T01:CDS | 25.0% |
| ! | GATTTGTAACCTAAAAAAAG+TGG | + | Chr1:12412984-12413003 | None:intergenic | 25.0% |
| !! | ATTAAGATTAGGTTTTTCCT+TGG | - | Chr1:12413684-12413703 | MsG0180000871.01.T01:CDS | 25.0% |
| !! | TAAAAGGAGGAAACTATTTT+TGG | - | Chr1:12413085-12413104 | MsG0180000871.01.T01:intron | 25.0% |
| !! | TTAAGATTAGGTTTTTCCTT+GGG | - | Chr1:12413685-12413704 | MsG0180000871.01.T01:CDS | 25.0% |
| TATCTTCTTCATTATCTCTC+TGG | - | Chr1:12412908-12412927 | MsG0180000871.01.T01:intron | 30.0% | |
| TCAATTGGTCAATCCAATAT+AGG | + | Chr1:12412868-12412887 | None:intergenic | 30.0% | |
| ! | AATTTTATGCAAAGTTCCCA+AGG | + | Chr1:12413704-12413723 | None:intergenic | 30.0% |
| !!! | AAATGCTTTATTTTTGTGCC+CGG | - | Chr1:12413747-12413766 | MsG0180000871.01.T01:exon | 30.0% |
| ACATTGCAAATCAGAAACCA+TGG | - | Chr1:12412345-12412364 | MsG0180000871.01.T01:three_prime_UTR | 35.0% | |
| ATTAGAGCTTGAATGCAATC+AGG | + | Chr1:12412409-12412428 | None:intergenic | 35.0% | |
| CACAAAAAACAATCCCACTA+AGG | + | Chr1:12412720-12412739 | None:intergenic | 35.0% | |
| CTTTCTTCATCTACAACTAG+AGG | + | Chr1:12413655-12413674 | None:intergenic | 35.0% | |
| GACTGATCATTGGGTTTATT+GGG | - | Chr1:12413558-12413577 | MsG0180000871.01.T01:intron | 35.0% | |
| TGGAAATTGGACTGATCATT+GGG | - | Chr1:12413549-12413568 | MsG0180000871.01.T01:intron | 35.0% | |
| ! | TGGGATGAAATTAATGGATG+AGG | + | Chr1:12412573-12412592 | None:intergenic | 35.0% |
| !!! | CTTAGTGGGATTGTTTTTTG+TGG | - | Chr1:12412718-12412737 | MsG0180000871.01.T01:CDS | 35.0% |
| ACCAGCAAAGACAAAGAGAA+AGG | + | Chr1:12412449-12412468 | None:intergenic | 40.0% | |
| ACCATGGTTGATCCAAAGAA+AGG | - | Chr1:12413403-12413422 | MsG0180000871.01.T01:intron | 40.0% | |
| ACCTTTCTCTTTGTCTTTGC+TGG | - | Chr1:12412445-12412464 | MsG0180000871.01.T01:CDS | 40.0% | |
| AGCAAAGACAAAGAGAAAGG+TGG | + | Chr1:12412446-12412465 | None:intergenic | 40.0% | |
| AGCTACTAAGACTAACTCCT+TGG | - | Chr1:12412661-12412680 | MsG0180000871.01.T01:CDS | 40.0% | |
| ATACACTTGCAAGTGGAGTA+GGG | - | Chr1:12413317-12413336 | MsG0180000871.01.T01:CDS | 40.0% | |
| CAATTTCCACTAACCAAAGC+AGG | + | Chr1:12413538-12413557 | None:intergenic | 40.0% | |
| CTGCTTTGGTTAGTGGAAAT+TGG | - | Chr1:12413536-12413555 | MsG0180000871.01.T01:intron | 40.0% | |
| CTTCTTCATTATCTCTCTGG+TGG | - | Chr1:12412911-12412930 | MsG0180000871.01.T01:intron | 40.0% | |
| GATCATTGGGTTTATTGGGT+TGG | - | Chr1:12413562-12413581 | MsG0180000871.01.T01:intron | 40.0% | |
| GGACTGATCATTGGGTTTAT+TGG | - | Chr1:12413557-12413576 | MsG0180000871.01.T01:intron | 40.0% | |
| GTACACTCAAGGAGTAGTTT+GGG | - | Chr1:12413339-12413358 | MsG0180000871.01.T01:CDS | 40.0% | |
| GTGGAAATTGGACTGATCAT+TGG | - | Chr1:12413548-12413567 | MsG0180000871.01.T01:intron | 40.0% | |
| TCCTTTCTTTGGATCAACCA+TGG | + | Chr1:12413407-12413426 | None:intergenic | 40.0% | |
| TCGTTCGTTCGATCCTATAT+TGG | - | Chr1:12412852-12412871 | MsG0180000871.01.T01:intron | 40.0% | |
| ! | ATGAACCCTGCAAGATCTTT+TGG | - | Chr1:12413511-12413530 | MsG0180000871.01.T01:intron | 40.0% |
| ! | GGTTGTTCCTAACGCAATTT+TGG | + | Chr1:12412371-12412390 | None:intergenic | 40.0% |
| ! | TCATTATCTCTCTGGTGGAT+TGG | - | Chr1:12412916-12412935 | MsG0180000871.01.T01:intron | 40.0% |
| ! | TGAACCCTGCAAGATCTTTT+GGG | - | Chr1:12413512-12413531 | MsG0180000871.01.T01:intron | 40.0% |
| !! | TATTGGGTTGGACCACTTAT+TGG | - | Chr1:12413574-12413593 | MsG0180000871.01.T01:intron | 40.0% |
| AACCTTAGTTGGGTTTGTGG+TGG | - | Chr1:12413447-12413466 | MsG0180000871.01.T01:intron | 45.0% | |
| ACCACAAACCCAACTAAGGT+TGG | + | Chr1:12413448-12413467 | None:intergenic | 45.0% | |
| ACCATGGCCAAAATTGCGTT+AGG | - | Chr1:12412361-12412380 | MsG0180000871.01.T01:three_prime_UTR | 45.0% | |
| ACCTTAGTTGGGTTTGTGGT+GGG | - | Chr1:12413448-12413467 | MsG0180000871.01.T01:intron | 45.0% | |
| CAGCTGCAGATGCTATCAAT+TGG | + | Chr1:12412883-12412902 | None:intergenic | 45.0% | |
| CATACACTTGCAAGTGGAGT+AGG | - | Chr1:12413316-12413335 | MsG0180000871.01.T01:CDS | 45.0% | |
| CCACAAACCCAACTAAGGTT+GGG | + | Chr1:12413447-12413466 | None:intergenic | 45.0% | |
| CTAAGTGGAGATGCCTTAGT+GGG | - | Chr1:12412704-12412723 | MsG0180000871.01.T01:CDS | 45.0% | |
| CTCTTTGTCTTTGCTGGTGT+TGG | - | Chr1:12412451-12412470 | MsG0180000871.01.T01:CDS | 45.0% | |
| GGTACACTCAAGGAGTAGTT+TGG | - | Chr1:12413338-12413357 | MsG0180000871.01.T01:CDS | 45.0% | |
| GTTCACTGTGTATGCAACCA+TGG | - | Chr1:12413387-12413406 | MsG0180000871.01.T01:CDS | 45.0% | |
| TAGTTATGTGACCTCCGACA+AGG | + | Chr1:12412832-12412851 | None:intergenic | 45.0% | |
| TATTGCACATGCTCTTGTGG+TGG | - | Chr1:12412742-12412761 | MsG0180000871.01.T01:CDS | 45.0% | |
| TCTTGCAGGGTTCATTGAAG+CGG | + | Chr1:12413506-12413525 | None:intergenic | 45.0% | |
| ! | AAGATCTTTTGGGCCTGCTT+TGG | - | Chr1:12413522-12413541 | MsG0180000871.01.T01:intron | 45.0% |
| !! | TCCTAACGCAATTTTGGCCA+TGG | + | Chr1:12412365-12412384 | None:intergenic | 45.0% |
| !! | AAATTTATTATTATTTATGT+TGG | - | Chr1:12413125-12413144 | MsG0180000871.01.T01:intron | 5.0% |
| AAGTCACGGCGGGATTCAAA+TGG | + | Chr1:12412802-12412821 | None:intergenic | 50.0% | |
| AGTGGAGTAGGGTACACTCA+AGG | - | Chr1:12413328-12413347 | MsG0180000871.01.T01:CDS | 50.0% | |
| ATCTCCGCCGCTCATATTTC+CGG | - | Chr1:12412773-12412792 | MsG0180000871.01.T01:CDS | 50.0% | |
| ATGGCCACCGGAAATATGAG+CGG | + | Chr1:12412783-12412802 | None:intergenic | 50.0% | |
| CAGGCCCAAAAGATCTTGCA+GGG | + | Chr1:12413519-12413538 | None:intergenic | 50.0% | |
| CCACTTGCAAGTGTATGAGC+TGG | + | Chr1:12413313-12413332 | None:intergenic | 50.0% | |
| CCAGCAAGTGCTCCTTTCTT+TGG | + | Chr1:12413418-12413437 | None:intergenic | 50.0% | |
| CCAGCTCATACACTTGCAAG+TGG | - | Chr1:12413310-12413329 | MsG0180000871.01.T01:CDS | 50.0% | |
| CCCAACCTTAGTTGGGTTTG+TGG | - | Chr1:12413444-12413463 | MsG0180000871.01.T01:intron | 50.0% | |
| CCTTAGTTGGGTTTGTGGTG+GGG | - | Chr1:12413449-12413468 | MsG0180000871.01.T01:intron | 50.0% | |
| CTTAGTTGGGTTTGTGGTGG+GGG | - | Chr1:12413450-12413469 | MsG0180000871.01.T01:intron | 50.0% | |
| GCAAGTCCACCACCAATAAG+TGG | + | Chr1:12413589-12413608 | None:intergenic | 50.0% | |
| GCTAAGTGGAGATGCCTTAG+TGG | - | Chr1:12412703-12412722 | MsG0180000871.01.T01:CDS | 50.0% | |
| GGCTATTGCACATGCTCTTG+TGG | - | Chr1:12412739-12412758 | MsG0180000871.01.T01:CDS | 50.0% | |
| GTTGGACCACTTATTGGTGG+TGG | - | Chr1:12413580-12413599 | MsG0180000871.01.T01:intron | 50.0% | |
| TGCGTTAGGAACAACCAGAG+AGG | - | Chr1:12412375-12412394 | MsG0180000871.01.T01:three_prime_UTR | 50.0% | |
| TTATGTGACCTCCGACAAGG+AGG | + | Chr1:12412829-12412848 | None:intergenic | 50.0% | |
| TTGAATCCCGCCGTGACTTT+GGG | - | Chr1:12412803-12412822 | MsG0180000871.01.T01:intron | 50.0% | |
| TTTGAATCCCGCCGTGACTT+TGG | - | Chr1:12412802-12412821 | MsG0180000871.01.T01:intron | 50.0% | |
| TTTGGGCCTGCTTTGGTTAG+TGG | - | Chr1:12413529-12413548 | MsG0180000871.01.T01:intron | 50.0% | |
| ! | TGGGTTGGACCACTTATTGG+TGG | - | Chr1:12413577-12413596 | MsG0180000871.01.T01:intron | 50.0% |
| !! | CCAAAGAAAGGAGCACTTGC+TGG | - | Chr1:12413415-12413434 | MsG0180000871.01.T01:intron | 50.0% |
| !! | CTTATTGGTGGTGGACTTGC+TGG | - | Chr1:12413589-12413608 | MsG0180000871.01.T01:intron | 50.0% |
| !! | GTTGGTTCTGCAATGACTGC+TGG | - | Chr1:12412469-12412488 | MsG0180000871.01.T01:CDS | 50.0% |
| ATCAGGCTGAGTAGCCTCTC+TGG | + | Chr1:12412392-12412411 | None:intergenic | 55.0% | |
| CCCCACCACAAACCCAACTA+AGG | + | Chr1:12413452-12413471 | None:intergenic | 55.0% | |
| GACAAGGAGGCCCAAAGTCA+CGG | + | Chr1:12412816-12412835 | None:intergenic | 55.0% | |
| GCAGGCCCAAAAGATCTTGC+AGG | + | Chr1:12413520-12413539 | None:intergenic | 55.0% | |
| GGCTAACATCCTTGCTGGTG+GGG | - | Chr1:12413471-12413490 | MsG0180000871.01.T01:intron | 55.0% | |
| GGGCTAACATCCTTGCTGGT+GGG | - | Chr1:12413470-12413489 | MsG0180000871.01.T01:intron | 55.0% | |
| GTGACTTTGGGCCTCCTTGT+CGG | - | Chr1:12412815-12412834 | MsG0180000871.01.T01:intron | 55.0% | |
| ! | CCTTGCTGGTGGGGCTTTTT+CGG | - | Chr1:12413480-12413499 | MsG0180000871.01.T01:intron | 55.0% |
| !! | AAAGGAGCACTTGCTGGCCT+GGG | - | Chr1:12413421-12413440 | MsG0180000871.01.T01:intron | 55.0% |
| AAGGAGGCCCAAAGTCACGG+CGG | + | Chr1:12412813-12412832 | None:intergenic | 60.0% | |
| ACCCAACTAAGGTTGGGCCC+AGG | + | Chr1:12413441-12413460 | None:intergenic | 60.0% | |
| ACTTTGGGCCTCCTTGTCGG+AGG | - | Chr1:12412818-12412837 | MsG0180000871.01.T01:intron | 60.0% | |
| CCGAAAAAGCCCCACCAGCA+AGG | + | Chr1:12413483-12413502 | None:intergenic | 60.0% | |
| GCCACCGGAAATATGAGCGG+CGG | + | Chr1:12412780-12412799 | None:intergenic | 60.0% | |
| GCCTGGGCCCAACCTTAGTT+GGG | - | Chr1:12413437-12413456 | MsG0180000871.01.T01:intron | 60.0% | |
| GGCGGGATTCAAATGGCCAC+CGG | + | Chr1:12412795-12412814 | None:intergenic | 60.0% | |
| GGGGCTAACATCCTTGCTGG+TGG | - | Chr1:12413469-12413488 | MsG0180000871.01.T01:intron | 60.0% | |
| GTGGGGGCTAACATCCTTGC+TGG | - | Chr1:12413466-12413485 | MsG0180000871.01.T01:intron | 60.0% | |
| TCCGCCGCTCATATTTCCGG+TGG | - | Chr1:12412776-12412795 | MsG0180000871.01.T01:CDS | 60.0% | |
| !! | GAAAGGAGCACTTGCTGGCC+TGG | - | Chr1:12413420-12413439 | MsG0180000871.01.T01:intron | 60.0% |
| AGGAGGCCCAAAGTCACGGC+GGG | + | Chr1:12412812-12412831 | None:intergenic | 65.0% | |
| GGCCTGGGCCCAACCTTAGT+TGG | - | Chr1:12413436-12413455 | MsG0180000871.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 12412319 | 12413796 | 12412319 | ID=MsG0180000871.01;Name=MsG0180000871.01 |
| Chr1 | mRNA | 12412319 | 12413796 | 12412319 | ID=MsG0180000871.01.T01;Parent=MsG0180000871.01;Name=MsG0180000871.01.T01;_AED=0.47;_eAED=0.47;_QI=45|1|1|1|1|0.66|3|115|247 |
| Chr1 | exon | 12413625 | 12413796 | 12413625 | ID=MsG0180000871.01.T01:exon:210;Parent=MsG0180000871.01.T01 |
| Chr1 | exon | 12413178 | 12413416 | 12413178 | ID=MsG0180000871.01.T01:exon:211;Parent=MsG0180000871.01.T01 |
| Chr1 | exon | 12412319 | 12412811 | 12412319 | ID=MsG0180000871.01.T01:exon:212;Parent=MsG0180000871.01.T01 |
| Chr1 | five_prime_UTR | 12413752 | 12413796 | 12413752 | ID=MsG0180000871.01.T01:five_prime_utr;Parent=MsG0180000871.01.T01 |
| Chr1 | CDS | 12413625 | 12413751 | 12413625 | ID=MsG0180000871.01.T01:cds;Parent=MsG0180000871.01.T01 |
| Chr1 | CDS | 12413178 | 12413416 | 12413178 | ID=MsG0180000871.01.T01:cds;Parent=MsG0180000871.01.T01 |
| Chr1 | CDS | 12412434 | 12412811 | 12412434 | ID=MsG0180000871.01.T01:cds;Parent=MsG0180000871.01.T01 |
| Chr1 | three_prime_UTR | 12412319 | 12412433 | 12412319 | ID=MsG0180000871.01.T01:three_prime_utr;Parent=MsG0180000871.01.T01 |
| Gene Sequence |
| Protein sequence |
