Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024653.01.T01 | XP_003593786.1 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024653.01.T01 | Q8LFP7 | 71.206 | 257 | 67 | 1 | 24 | 273 | 38 | 294 | 3.86E-131 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024653.01.T01 | G7ILK7 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000114.01 | MsG0580024653.01 | 0.801014 | 1.099501e-48 | 5.195322e-46 |
| MsG0180000355.01 | MsG0580024653.01 | 0.807496 | 4.913264e-50 | 2.740821e-47 |
| MsG0180002492.01 | MsG0580024653.01 | 0.800077 | 1.707089e-48 | 7.876144e-46 |
| MsG0180003353.01 | MsG0580024653.01 | 0.807745 | 4.349214e-50 | 2.441966e-47 |
| MsG0180003572.01 | MsG0580024653.01 | 0.844463 | 7.444052e-59 | 1.202677e-55 |
| MsG0180003741.01 | MsG0580024653.01 | 0.804054 | 2.597207e-49 | 1.326024e-46 |
| MsG0180004046.01 | MsG0580024653.01 | 0.801328 | 9.483790e-49 | 4.516555e-46 |
| MsG0180004493.01 | MsG0580024653.01 | 0.817742 | 2.816609e-52 | 2.068435e-49 |
| MsG0180004605.01 | MsG0580024653.01 | -0.821088 | 4.862530e-53 | 3.917826e-50 |
| MsG0180005575.01 | MsG0580024653.01 | 0.800877 | 1.172748e-48 | 5.522062e-46 |
| MsG0480019711.01 | MsG0580024653.01 | 0.804454 | 2.143930e-49 | 1.105839e-46 |
| MsG0480021195.01 | MsG0580024653.01 | 0.813573 | 2.389945e-51 | 1.566493e-48 |
| MsG0480022514.01 | MsG0580024653.01 | 0.809716 | 1.649352e-50 | 9.755832e-48 |
| MsG0480022586.01 | MsG0580024653.01 | 0.826941 | 2.057074e-54 | 1.957336e-51 |
| MsG0480023172.01 | MsG0580024653.01 | 0.818847 | 1.582929e-52 | 1.198409e-49 |
| MsG0580024653.01 | MsG0580025407.01 | -0.800217 | 1.598171e-48 | 7.400040e-46 |
| MsG0580024653.01 | MsG0580025607.01 | 0.825748 | 3.957445e-54 | 3.639318e-51 |
| MsG0580024653.01 | MsG0580027320.01 | 0.816148 | 6.420158e-52 | 4.513351e-49 |
| MsG0580024653.01 | MsG0580027925.01 | 0.843143 | 1.679603e-58 | 2.603270e-55 |
| MsG0580024653.01 | MsG0580028613.01 | -0.827672 | 1.374302e-54 | 1.335772e-51 |
| MsG0580024653.01 | MsG0580029924.01 | 0.805310 | 1.419857e-49 | 7.487136e-47 |
| MsG0580024653.01 | MsG0680030515.01 | 0.803652 | 3.146654e-49 | 1.589970e-46 |
| MsG0580024653.01 | MsG0680030784.01 | 0.806114 | 9.623795e-50 | 5.180680e-47 |
| MsG0580024653.01 | MsG0680031469.01 | 0.804956 | 1.683867e-49 | 8.799464e-47 |
| MsG0580024653.01 | MsG0680034767.01 | 0.828263 | 9.907179e-55 | 9.796871e-52 |
| MsG0580024653.01 | MsG0780036307.01 | 0.813849 | 2.078599e-51 | 1.372592e-48 |
| MsG0580024653.01 | MsG0780036593.01 | 0.816669 | 4.908058e-52 | 3.499833e-49 |
| MsG0580024653.01 | MsG0780037341.01 | 0.807694 | 4.460412e-50 | 2.500867e-47 |
| MsG0580024653.01 | MsG0780037395.01 | 0.826431 | 2.722874e-54 | 2.553154e-51 |
| MsG0580024653.01 | MsG0780039155.01 | 0.816573 | 5.157842e-52 | 3.668299e-49 |
| MsG0580024653.01 | MsG0780039439.01 | 0.819651 | 1.038173e-52 | 8.036742e-50 |
| MsG0580024653.01 | MsG0780040888.01 | 0.817246 | 3.642692e-52 | 2.638816e-49 |
| MsG0580024653.01 | MsG0780041440.01 | 0.831502 | 1.610061e-55 | 1.750526e-52 |
| MsG0580024653.01 | MsG0780041482.01 | 0.809188 | 2.140499e-50 | 1.248445e-47 |
| MsG0580024653.01 | MsG0880043128.01 | 0.811437 | 7.003545e-51 | 4.335295e-48 |
| MsG0580024653.01 | MsG0880043521.01 | 0.809116 | 2.217999e-50 | 1.291150e-47 |
| MsG0580024653.01 | MsG0880046517.01 | 0.811719 | 6.082286e-51 | 3.793011e-48 |
| MsG0580024653.01 | MsG0880046867.01 | 0.804579 | 2.019103e-49 | 1.044827e-46 |
| MsG0580024653.01 | MsG0880047696.01 | 0.814000 | 1.925352e-51 | 1.276597e-48 |
| MsG0580024653.01 | MsG0880047703.01 | 0.824230 | 9.032047e-54 | 7.952919e-51 |
| MsG0380015300.01 | MsG0580024653.01 | 0.804791 | 1.823388e-49 | 9.487864e-47 |
| MsG0380016864.01 | MsG0580024653.01 | 0.816134 | 6.466275e-52 | 4.544005e-49 |
| MsG0280007062.01 | MsG0580024653.01 | 0.812002 | 5.276856e-51 | 3.315813e-48 |
| MsG0280007432.01 | MsG0580024653.01 | 0.823845 | 1.112038e-53 | 9.686454e-51 |
| MsG0280008738.01 | MsG0580024653.01 | 0.815468 | 9.104820e-52 | 6.282825e-49 |
| MsG0280008936.01 | MsG0580024653.01 | 0.801428 | 9.046127e-49 | 4.318984e-46 |
| MsG0280010148.01 | MsG0580024653.01 | 0.802083 | 6.638223e-49 | 3.222467e-46 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024653.01.T01 | MTR_2g017570 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 546 |
| MsG0580024653.01.T01 | MTR_2g017610 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 545 |
| MsG0580024653.01.T01 | MTR_2g017590 | 81.818 | 264 | 48 | 0 | 7 | 270 | 5 | 268 | 1.47e-164 | 457 |
| MsG0580024653.01.T01 | MTR_2g017620 | 78.947 | 266 | 56 | 0 | 1 | 266 | 1 | 266 | 7.13e-156 | 435 |
| MsG0580024653.01.T01 | MTR_8g087720 | 77.239 | 268 | 61 | 0 | 1 | 268 | 1 | 268 | 3.01e-154 | 431 |
| MsG0580024653.01.T01 | MTR_2g017620 | 80.159 | 252 | 50 | 0 | 15 | 266 | 1 | 252 | 7.24e-150 | 419 |
| MsG0580024653.01.T01 | MTR_8g087710 | 70.849 | 271 | 79 | 0 | 3 | 273 | 4 | 274 | 7.30e-143 | 402 |
| MsG0580024653.01.T01 | MTR_2g017660 | 69.853 | 272 | 75 | 2 | 1 | 265 | 1 | 272 | 4.44e-141 | 398 |
| MsG0580024653.01.T01 | MTR_8g087720 | 78.109 | 201 | 44 | 0 | 1 | 201 | 1 | 201 | 8.75e-112 | 321 |
| MsG0580024653.01.T01 | MTR_2g017620 | 83.243 | 185 | 31 | 0 | 82 | 266 | 1 | 185 | 1.51e-111 | 320 |
| MsG0580024653.01.T01 | MTR_4g084880 | 58.436 | 243 | 99 | 1 | 32 | 272 | 29 | 271 | 3.13e-103 | 301 |
| MsG0580024653.01.T01 | MTR_8g087720 | 75.000 | 184 | 46 | 0 | 1 | 184 | 1 | 184 | 3.47e-97 | 283 |
| MsG0580024653.01.T01 | MTR_5g079570 | 53.138 | 239 | 103 | 3 | 18 | 253 | 22 | 254 | 6.26e-85 | 255 |
| MsG0580024653.01.T01 | MTR_3g008920 | 53.975 | 239 | 107 | 2 | 18 | 256 | 8 | 243 | 2.12e-84 | 253 |
| MsG0580024653.01.T01 | MTR_4g006730 | 49.801 | 251 | 117 | 3 | 21 | 265 | 58 | 305 | 3.91e-71 | 221 |
| MsG0580024653.01.T01 | MTR_7g010650 | 47.534 | 223 | 114 | 2 | 31 | 251 | 28 | 249 | 2.29e-69 | 216 |
| MsG0580024653.01.T01 | MTR_2g104940 | 51.628 | 215 | 99 | 2 | 36 | 248 | 78 | 289 | 3.91e-68 | 214 |
| MsG0580024653.01.T01 | MTR_5g063930 | 47.328 | 262 | 115 | 7 | 15 | 260 | 5 | 259 | 9.68e-68 | 211 |
| MsG0580024653.01.T01 | MTR_1g097840 | 47.200 | 250 | 113 | 4 | 26 | 259 | 54 | 300 | 8.26e-67 | 210 |
| MsG0580024653.01.T01 | MTR_4g006630 | 50.679 | 221 | 100 | 3 | 51 | 265 | 1 | 218 | 1.04e-64 | 202 |
| MsG0580024653.01.T01 | MTR_4g006730 | 50.679 | 221 | 100 | 3 | 51 | 265 | 1 | 218 | 1.19e-64 | 201 |
| MsG0580024653.01.T01 | MTR_4g006730 | 50.820 | 183 | 85 | 2 | 21 | 201 | 58 | 237 | 5.04e-47 | 158 |
| MsG0580024653.01.T01 | MTR_1g070385 | 39.437 | 213 | 128 | 1 | 40 | 252 | 64 | 275 | 4.96e-44 | 159 |
| MsG0580024653.01.T01 | MTR_1g097840 | 47.849 | 186 | 84 | 3 | 26 | 201 | 54 | 236 | 1.25e-43 | 149 |
| MsG0580024653.01.T01 | MTR_7g010650 | 43.137 | 153 | 84 | 2 | 31 | 181 | 28 | 179 | 1.76e-37 | 131 |
| MsG0580024653.01.T01 | MTR_4g006650 | 47.222 | 144 | 62 | 3 | 39 | 180 | 5 | 136 | 7.02e-27 | 107 |
| MsG0580024653.01.T01 | MTR_8g013680 | 32.367 | 207 | 133 | 3 | 37 | 236 | 18 | 224 | 3.65e-25 | 100 |
| MsG0580024653.01.T01 | MTR_1g077540 | 31.950 | 241 | 146 | 6 | 24 | 253 | 10 | 243 | 1.21e-24 | 99.8 |
| MsG0580024653.01.T01 | MTR_2g101370 | 30.645 | 248 | 160 | 6 | 18 | 256 | 3 | 247 | 2.14e-23 | 95.9 |
| MsG0580024653.01.T01 | MTR_6g069040 | 29.630 | 243 | 155 | 6 | 21 | 253 | 7 | 243 | 2.32e-22 | 93.2 |
| MsG0580024653.01.T01 | MTR_1g006490 | 32.143 | 224 | 136 | 7 | 19 | 236 | 7 | 220 | 2.80e-22 | 92.8 |
| MsG0580024653.01.T01 | MTR_5g012810 | 33.478 | 230 | 142 | 7 | 37 | 256 | 18 | 246 | 3.94e-22 | 92.4 |
| MsG0580024653.01.T01 | MTR_1g006590 | 32.000 | 250 | 150 | 9 | 19 | 258 | 7 | 246 | 1.37e-21 | 91.3 |
| MsG0580024653.01.T01 | MTR_4g063090 | 32.159 | 227 | 140 | 7 | 43 | 256 | 26 | 251 | 1.23e-17 | 80.5 |
| MsG0580024653.01.T01 | MTR_7g103030 | 30.667 | 225 | 146 | 6 | 37 | 252 | 20 | 243 | 2.13e-17 | 79.7 |
| MsG0580024653.01.T01 | MTR_3g118010 | 28.384 | 229 | 141 | 5 | 38 | 247 | 37 | 261 | 1.17e-16 | 78.2 |
| MsG0580024653.01.T01 | MTR_2g094270 | 30.899 | 178 | 111 | 3 | 72 | 237 | 84 | 261 | 1.37e-16 | 78.2 |
| MsG0580024653.01.T01 | MTR_5g082070 | 31.019 | 216 | 127 | 7 | 41 | 237 | 58 | 270 | 2.67e-16 | 77.4 |
| MsG0580024653.01.T01 | MTR_5g010150 | 30.047 | 213 | 133 | 5 | 41 | 237 | 55 | 267 | 7.73e-16 | 75.9 |
| MsG0580024653.01.T01 | MTR_1g115405 | 32.227 | 211 | 130 | 5 | 37 | 237 | 20 | 227 | 8.31e-16 | 75.5 |
| MsG0580024653.01.T01 | MTR_8g098375 | 30.047 | 213 | 133 | 5 | 41 | 237 | 55 | 267 | 8.70e-16 | 75.9 |
| MsG0580024653.01.T01 | MTR_7g101190 | 29.412 | 221 | 135 | 6 | 38 | 237 | 39 | 259 | 9.05e-16 | 75.9 |
| MsG0580024653.01.T01 | MTR_3g070210 | 28.638 | 213 | 136 | 5 | 41 | 237 | 58 | 270 | 7.77e-15 | 73.2 |
| MsG0580024653.01.T01 | MTR_4g415300 | 29.245 | 212 | 135 | 5 | 41 | 237 | 59 | 270 | 1.22e-14 | 72.8 |
| MsG0580024653.01.T01 | MTR_2g094270 | 29.630 | 162 | 105 | 2 | 72 | 224 | 84 | 245 | 7.29e-14 | 70.1 |
| MsG0580024653.01.T01 | MTR_1g095070 | 28.571 | 182 | 112 | 4 | 81 | 247 | 25 | 203 | 1.92e-13 | 68.2 |
| MsG0580024653.01.T01 | MTR_3g070210 | 28.283 | 198 | 129 | 4 | 41 | 225 | 58 | 255 | 2.41e-13 | 68.9 |
| MsG0580024653.01.T01 | MTR_7g023350 | 28.740 | 254 | 147 | 9 | 11 | 251 | 4 | 236 | 4.92e-13 | 67.8 |
| MsG0580024653.01.T01 | MTR_2g060360 | 26.230 | 244 | 165 | 5 | 37 | 273 | 18 | 253 | 2.63e-12 | 65.5 |
| MsG0580024653.01.T01 | MTR_4g059390 | 29.282 | 181 | 110 | 5 | 72 | 237 | 82 | 259 | 4.32e-12 | 65.5 |
| MsG0580024653.01.T01 | MTR_1g095070 | 28.571 | 154 | 95 | 3 | 81 | 222 | 25 | 175 | 4.32e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024653.01.T01 | AT4G18910 | 71.206 | 257 | 67 | 1 | 24 | 273 | 38 | 294 | 3.93e-132 | 376 |
| MsG0580024653.01.T01 | AT4G19030 | 68.898 | 254 | 72 | 1 | 24 | 270 | 41 | 294 | 3.70e-126 | 361 |
| MsG0580024653.01.T01 | AT5G37820 | 58.824 | 255 | 102 | 1 | 18 | 269 | 20 | 274 | 2.31e-100 | 295 |
| MsG0580024653.01.T01 | AT5G37820 | 58.824 | 255 | 102 | 1 | 18 | 269 | 56 | 310 | 8.26e-100 | 295 |
| MsG0580024653.01.T01 | AT5G37810 | 54.380 | 274 | 118 | 3 | 1 | 268 | 1 | 273 | 5.66e-99 | 291 |
| MsG0580024653.01.T01 | AT4G18910 | 75.135 | 185 | 39 | 1 | 24 | 201 | 38 | 222 | 2.15e-92 | 272 |
| MsG0580024653.01.T01 | AT2G34390 | 52.098 | 286 | 119 | 3 | 1 | 269 | 1 | 285 | 4.50e-91 | 271 |
| MsG0580024653.01.T01 | AT1G31885 | 53.441 | 247 | 108 | 1 | 20 | 259 | 25 | 271 | 9.26e-91 | 272 |
| MsG0580024653.01.T01 | AT4G19030 | 70.109 | 184 | 48 | 1 | 24 | 200 | 41 | 224 | 5.72e-88 | 261 |
| MsG0580024653.01.T01 | AT2G34390 | 55.882 | 238 | 97 | 2 | 39 | 269 | 7 | 243 | 1.01e-86 | 259 |
| MsG0580024653.01.T01 | AT1G31885 | 55.300 | 217 | 90 | 1 | 50 | 259 | 1 | 217 | 4.00e-84 | 253 |
| MsG0580024653.01.T01 | AT4G19030 | 67.879 | 165 | 46 | 1 | 24 | 181 | 41 | 205 | 7.84e-76 | 230 |
| MsG0580024653.01.T01 | AT2G34390 | 54.128 | 218 | 82 | 3 | 1 | 201 | 1 | 217 | 8.77e-69 | 212 |
| MsG0580024653.01.T01 | AT4G10380 | 48.163 | 245 | 112 | 4 | 27 | 259 | 63 | 304 | 2.62e-68 | 214 |
| MsG0580024653.01.T01 | AT1G80760 | 52.489 | 221 | 100 | 2 | 34 | 252 | 76 | 293 | 3.00e-68 | 214 |
| MsG0580024653.01.T01 | AT2G34390 | 52.500 | 200 | 77 | 3 | 1 | 183 | 1 | 199 | 9.87e-60 | 189 |
| MsG0580024653.01.T01 | AT3G06100 | 39.908 | 218 | 129 | 2 | 37 | 253 | 45 | 261 | 6.08e-44 | 150 |
| MsG0580024653.01.T01 | AT3G06100 | 40.187 | 214 | 126 | 2 | 41 | 253 | 1 | 213 | 1.54e-43 | 148 |
| MsG0580024653.01.T01 | AT1G31885 | 56.842 | 95 | 41 | 0 | 20 | 114 | 25 | 119 | 2.80e-31 | 113 |
| MsG0580024653.01.T01 | AT2G29870 | 49.573 | 117 | 59 | 0 | 153 | 269 | 20 | 136 | 3.07e-31 | 113 |
| MsG0580024653.01.T01 | AT3G16240 | 34.300 | 207 | 129 | 3 | 37 | 236 | 18 | 224 | 9.90e-28 | 107 |
| MsG0580024653.01.T01 | AT5G47450 | 34.199 | 231 | 142 | 6 | 37 | 257 | 18 | 248 | 1.58e-26 | 104 |
| MsG0580024653.01.T01 | AT4G17340 | 33.043 | 230 | 144 | 6 | 37 | 256 | 18 | 247 | 2.16e-24 | 98.6 |
| MsG0580024653.01.T01 | AT3G06100 | 39.007 | 141 | 84 | 2 | 114 | 253 | 41 | 180 | 2.66e-24 | 97.1 |
| MsG0580024653.01.T01 | AT1G17810 | 32.794 | 247 | 143 | 7 | 24 | 253 | 13 | 253 | 5.47e-24 | 98.2 |
| MsG0580024653.01.T01 | AT1G73190 | 30.556 | 252 | 140 | 7 | 24 | 253 | 13 | 251 | 1.55e-22 | 94.4 |
| MsG0580024653.01.T01 | AT2G25810 | 30.837 | 227 | 137 | 7 | 19 | 237 | 7 | 221 | 2.31e-19 | 85.1 |
| MsG0580024653.01.T01 | AT3G26520 | 32.381 | 210 | 129 | 5 | 37 | 236 | 21 | 227 | 1.22e-18 | 83.2 |
| MsG0580024653.01.T01 | AT2G36830 | 32.018 | 228 | 138 | 7 | 24 | 240 | 10 | 231 | 6.37e-18 | 81.3 |
| MsG0580024653.01.T01 | AT4G35100 | 30.131 | 229 | 137 | 6 | 38 | 247 | 38 | 262 | 8.98e-18 | 81.3 |
| MsG0580024653.01.T01 | AT4G35100 | 30.131 | 229 | 137 | 6 | 38 | 247 | 38 | 262 | 8.98e-18 | 81.3 |
| MsG0580024653.01.T01 | AT5G60660 | 28.270 | 237 | 143 | 6 | 35 | 247 | 36 | 269 | 1.41e-17 | 80.9 |
| MsG0580024653.01.T01 | AT2G16850 | 28.017 | 232 | 138 | 6 | 38 | 247 | 36 | 260 | 2.53e-16 | 77.4 |
| MsG0580024653.01.T01 | AT2G39010 | 31.217 | 189 | 116 | 5 | 72 | 247 | 81 | 268 | 5.37e-16 | 76.6 |
| MsG0580024653.01.T01 | AT4G01470 | 30.288 | 208 | 138 | 3 | 37 | 237 | 20 | 227 | 6.20e-16 | 75.9 |
| MsG0580024653.01.T01 | AT3G53420 | 29.319 | 191 | 117 | 4 | 72 | 247 | 82 | 269 | 9.29e-16 | 75.9 |
| MsG0580024653.01.T01 | AT3G53420 | 29.319 | 191 | 117 | 4 | 72 | 247 | 82 | 269 | 9.29e-16 | 75.9 |
| MsG0580024653.01.T01 | AT3G54820 | 26.923 | 234 | 144 | 5 | 38 | 247 | 38 | 268 | 6.88e-15 | 73.6 |
| MsG0580024653.01.T01 | AT1G01620 | 31.492 | 181 | 106 | 4 | 72 | 237 | 17 | 194 | 7.06e-15 | 72.0 |
| MsG0580024653.01.T01 | AT1G01620 | 31.492 | 181 | 106 | 4 | 72 | 237 | 89 | 266 | 1.24e-14 | 72.8 |
| MsG0580024653.01.T01 | AT2G37170 | 28.272 | 191 | 119 | 4 | 72 | 247 | 80 | 267 | 2.13e-14 | 72.0 |
| MsG0580024653.01.T01 | AT3G61430 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 2.45e-14 | 72.0 |
| MsG0580024653.01.T01 | AT3G61430 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 2.45e-14 | 72.0 |
| MsG0580024653.01.T01 | AT4G00430 | 31.492 | 181 | 106 | 4 | 72 | 237 | 90 | 267 | 3.25e-14 | 71.6 |
| MsG0580024653.01.T01 | AT2G37170 | 28.272 | 191 | 119 | 4 | 72 | 247 | 123 | 310 | 3.69e-14 | 71.6 |
| MsG0580024653.01.T01 | AT2G37180 | 28.272 | 191 | 119 | 4 | 72 | 247 | 80 | 267 | 3.98e-14 | 71.2 |
| MsG0580024653.01.T01 | AT2G45960 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 6.54e-14 | 70.5 |
| MsG0580024653.01.T01 | AT4G23400 | 30.939 | 181 | 107 | 4 | 72 | 237 | 90 | 267 | 1.12e-13 | 70.1 |
| MsG0580024653.01.T01 | AT3G47440 | 29.167 | 216 | 143 | 5 | 37 | 244 | 22 | 235 | 2.18e-13 | 68.6 |
| MsG0580024653.01.T01 | AT2G45960 | 28.351 | 194 | 127 | 4 | 41 | 222 | 55 | 248 | 7.13e-13 | 67.8 |
| MsG0580024653.01.T01 | AT2G45960 | 28.351 | 194 | 127 | 4 | 41 | 222 | 55 | 248 | 7.76e-13 | 67.4 |
Find 84 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCTGTTGGTCACATTTC+TGG | 0.071303 | 5:-7758894 | MsG0580024653.01.T01:CDS |
| TATCTTATGTTCGTCATTTC+TGG | 0.082482 | 5:-7758059 | MsG0580024653.01.T01:CDS |
| AAGAGTGCCTCTTTCCTTAA+AGG | 0.183929 | 5:-7756972 | MsG0580024653.01.T01:CDS |
| TCCTGGGATTTCAATTGTTT+GGG | 0.185357 | 5:-7758940 | MsG0580024653.01.T01:CDS |
| TTCATTGATGCTCCAGTAAT+TGG | 0.244218 | 5:+7757143 | None:intergenic |
| TGCATGACTCATCACACTTT+TGG | 0.246215 | 5:+7759441 | None:intergenic |
| ATCCTGGGATTTCAATTGTT+TGG | 0.255375 | 5:-7758941 | MsG0580024653.01.T01:CDS |
| CTTATTCTTTGTCGGTGATA+TGG | 0.259310 | 5:-7759525 | MsG0580024653.01.T01:exon |
| GGGTCTCACTGTTATGGTTT+TGG | 0.266153 | 5:-7758919 | MsG0580024653.01.T01:CDS |
| TGCATCCACCAAAAGGTTTC+CGG | 0.271933 | 5:-7758838 | MsG0580024653.01.T01:CDS |
| TTCCTTAAAGGAGTAGAAAA+TGG | 0.281136 | 5:-7756960 | MsG0580024653.01.T01:CDS |
| ACGTACTTCTTGATATTTGC+AGG | 0.286199 | 5:-7759011 | MsG0580024653.01.T01:CDS |
| TTTGTTAACAGGCCAATTAC+TGG | 0.289918 | 5:-7757155 | MsG0580024653.01.T01:intron |
| CTGCTTAACCGGAAACCTTT+TGG | 0.301395 | 5:+7758830 | None:intergenic |
| TGTTTGGGGTCTCACTGTTA+TGG | 0.308145 | 5:-7758925 | MsG0580024653.01.T01:CDS |
| TATATAATATCTCAAGTTCT+TGG | 0.312865 | 5:-7758203 | MsG0580024653.01.T01:CDS |
| CATATCACCGACAAAGAATA+AGG | 0.326631 | 5:+7759526 | None:intergenic |
| CTTCTAAATGTTATGTTTGC+CGG | 0.328211 | 5:-7757526 | MsG0580024653.01.T01:CDS |
| TAGAGGAATATGGATATATT+TGG | 0.328926 | 5:-7757078 | MsG0580024653.01.T01:CDS |
| GCAGGTCCTAAGCTCCTTGC+AGG | 0.331255 | 5:+7757119 | None:intergenic |
| GCATCATCCTTATTCTTTGT+CGG | 0.365447 | 5:-7759533 | MsG0580024653.01.T01:five_prime_UTR |
| TATCTCTAGTTAATTTAGAT+TGG | 0.367884 | 5:-7756832 | MsG0580024653.01.T01:three_prime_UTR |
| ACTCGGATCACCTGCTTAAC+CGG | 0.396444 | 5:+7758819 | None:intergenic |
| TCCTGCTGGTTCTGATCTCC+AGG | 0.406259 | 5:-7758111 | MsG0580024653.01.T01:CDS |
| TTCTGATCTCCAGGCATTTG+TGG | 0.415818 | 5:-7758102 | MsG0580024653.01.T01:CDS |
| ATAAAGAGTATAGAGGAATA+TGG | 0.423309 | 5:-7757088 | MsG0580024653.01.T01:CDS |
| ATGTAATTTACTTTATGTTA+CGG | 0.424850 | 5:-7756747 | MsG0580024653.01.T01:three_prime_UTR |
| TTCTACTCCTTTAAGGAAAG+AGG | 0.436744 | 5:+7756965 | None:intergenic |
| ATGAACCCTGCAAGGAGCTT+AGG | 0.445185 | 5:-7757125 | MsG0580024653.01.T01:CDS |
| AGTAGATCCAACTGCAAGTC+CGG | 0.451623 | 5:+7757552 | None:intergenic |
| ACACTTAGGCTTATATTCAA+TGG | 0.454254 | 5:-7758161 | MsG0580024653.01.T01:CDS |
| GACAAAGTGGTAACACATCC+TGG | 0.456746 | 5:-7758957 | MsG0580024653.01.T01:CDS |
| CAAAAGGTTTCCGGTTAAGC+AGG | 0.462415 | 5:-7758829 | MsG0580024653.01.T01:intron |
| TAAGTGAGTTAGATTTATCA+AGG | 0.466276 | 5:-7756931 | MsG0580024653.01.T01:exon |
| CTCTTACTAATTTCACGCAC+TGG | 0.467398 | 5:+7756990 | None:intergenic |
| TTACATTCAAAACCATTTCG+TGG | 0.488661 | 5:+7759477 | None:intergenic |
| GCAAAAGAGGCACATAGTCT+TGG | 0.488743 | 5:+7759417 | None:intergenic |
| ACAACTCTTGGTGCCATAGC+TGG | 0.490463 | 5:-7757050 | MsG0580024653.01.T01:CDS |
| AAGCAATGGAAACCACGAAA+TGG | 0.491267 | 5:-7759489 | MsG0580024653.01.T01:CDS |
| TTGGTGCCATAGCTGGTACA+TGG | 0.491349 | 5:-7757043 | MsG0580024653.01.T01:CDS |
| ATACACACCTTCTGCAAAAG+AGG | 0.497346 | 5:+7759404 | None:intergenic |
| TTCTAAATGTTATGTTTGCC+GGG | 0.499731 | 5:-7757525 | MsG0580024653.01.T01:intron |
| TATTTGGTATCAACAACTCT+TGG | 0.500417 | 5:-7757062 | MsG0580024653.01.T01:CDS |
| TGCAGGGTGTGCTGCTGTTG+TGG | 0.511373 | 5:-7758994 | MsG0580024653.01.T01:CDS |
| TACTCTTTATGAACAATAGC+AGG | 0.512534 | 5:+7757101 | None:intergenic |
| TTGCTCATGCATCCACCAAA+AGG | 0.514247 | 5:-7758845 | MsG0580024653.01.T01:CDS |
| CCTGGGATTTCAATTGTTTG+GGG | 0.520676 | 5:-7758939 | MsG0580024653.01.T01:CDS |
| TGAATTCAACCACAAATGCC+TGG | 0.521494 | 5:+7758093 | None:intergenic |
| TTACCACTTTGTCATTGTCA+AGG | 0.527510 | 5:+7758967 | None:intergenic |
| GGAGATTACCGCTCTATTGT+CGG | 0.528942 | 5:+7758028 | None:intergenic |
| GTAGTTGGTAGCAGAGGTTG+TGG | 0.535028 | 5:-7759036 | MsG0580024653.01.T01:intron |
| TGGTGCCATAGCTGGTACAT+GGG | 0.538881 | 5:-7757042 | MsG0580024653.01.T01:CDS |
| TCGCAGATTGGTGAGTTGGC+CGG | 0.540241 | 5:-7757571 | MsG0580024653.01.T01:intron |
| CCCCAAACAATTGAAATCCC+AGG | 0.550515 | 5:+7758939 | None:intergenic |
| TATGTTCGTCATTTCTGGAG+TGG | 0.553193 | 5:-7758054 | MsG0580024653.01.T01:CDS |
| GCATGAGCAATGGTGACAGC+AGG | 0.555499 | 5:+7758858 | None:intergenic |
| TAGTTGGTAGCAGAGGTTGT+GGG | 0.558311 | 5:-7759035 | MsG0580024653.01.T01:CDS |
| AATATCGCAGATTGGTGAGT+TGG | 0.558536 | 5:-7757575 | MsG0580024653.01.T01:intron |
| GCACTGGCTTGTTTGTGTAC+CGG | 0.558893 | 5:+7757006 | None:intergenic |
| TAGGCTTATATTCAATGGCA+AGG | 0.559061 | 5:-7758156 | MsG0580024653.01.T01:CDS |
| ATATACATAACTAGAGGAAA+CGG | 0.565529 | 5:-7756795 | MsG0580024653.01.T01:three_prime_UTR |
| CATGGGCATATACTTTCATC+CGG | 0.565944 | 5:-7757025 | MsG0580024653.01.T01:CDS |
| CTTGGATCAACTCTTGCAAG+TGG | 0.567738 | 5:-7758185 | MsG0580024653.01.T01:CDS |
| CTTAAAGGAGTAGAAAATGG+TGG | 0.573302 | 5:-7756957 | MsG0580024653.01.T01:CDS |
| CGTACTTCTTGATATTTGCA+GGG | 0.575700 | 5:-7759010 | MsG0580024653.01.T01:CDS |
| GCCTGGAGATCAGAACCAGC+AGG | 0.579301 | 5:+7758110 | None:intergenic |
| ATATGCCCATGTACCAGCTA+TGG | 0.580208 | 5:+7757037 | None:intergenic |
| ACTTGAGATATTATATAAGC+CGG | 0.584944 | 5:+7758209 | None:intergenic |
| ATTGTTCATAAAGAGTATAG+AGG | 0.595518 | 5:-7757095 | MsG0580024653.01.T01:CDS |
| GAGTTGGCCGGACTTGCAGT+TGG | 0.596194 | 5:-7757559 | MsG0580024653.01.T01:CDS |
| GCTGATCATTCATCAAGCAA+TGG | 0.606516 | 5:-7759503 | MsG0580024653.01.T01:CDS |
| ACAAAGTGGTAACACATCCT+GGG | 0.613941 | 5:-7758956 | MsG0580024653.01.T01:CDS |
| GAGCATCAATGAACCCTGCA+AGG | 0.617643 | 5:-7757133 | MsG0580024653.01.T01:CDS |
| CAGGTCCTAAGCTCCTTGCA+GGG | 0.629880 | 5:+7757120 | None:intergenic |
| GTAACATAAAGTAAATTACA+TGG | 0.638499 | 5:+7756749 | None:intergenic |
| CTCTTGCAAGTGGAACACTT+AGG | 0.640873 | 5:-7758175 | MsG0580024653.01.T01:CDS |
| TATGTAATATACATAACTAG+AGG | 0.643201 | 5:-7756801 | MsG0580024653.01.T01:three_prime_UTR |
| TTGAATGTAGTTGGTAGCAG+AGG | 0.649135 | 5:-7759042 | MsG0580024653.01.T01:intron |
| AGTTGGTAGCAGAGGTTGTG+GGG | 0.653045 | 5:-7759034 | MsG0580024653.01.T01:CDS |
| TTTGGTGGATGCATGAGCAA+TGG | 0.663155 | 5:+7758848 | None:intergenic |
| GATTACCGCTCTATTGTCGG+TGG | 0.674328 | 5:+7758031 | None:intergenic |
| GATTTATCAAGGATTGCACG+AGG | 0.684895 | 5:-7756920 | MsG0580024653.01.T01:three_prime_UTR |
| GAACCTTGACAATGACAAAG+TGG | 0.704582 | 5:-7758970 | MsG0580024653.01.T01:CDS |
| AGTGGCCACCGACAATAGAG+CGG | 0.719424 | 5:-7758036 | MsG0580024653.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGACAAAAAAAATAAA+AGG | + | Chr5:7758726-7758745 | None:intergenic | 10.0% |
| !!! | AACAAATTTTTTATTTTCAA+CGG | + | Chr5:7758376-7758395 | None:intergenic | 10.0% |
| !!! | TTATTCAATAATTTTTTAGA+TGG | - | Chr5:7757696-7757715 | MsG0580024653.01.T01:intron | 10.0% |
| !!! | TTATTTTTCTTTTGAAAATT+GGG | - | Chr5:7758620-7758639 | MsG0580024653.01.T01:intron | 10.0% |
| !!! | TTTATTTTTCTTTTGAAAAT+TGG | - | Chr5:7758619-7758638 | MsG0580024653.01.T01:intron | 10.0% |
| !!! | TTTTTTTAAGTATATGAAAT+TGG | + | Chr5:7757119-7757138 | None:intergenic | 10.0% |
| !! | ATGTAATTTACTTTATGTTA+CGG | - | Chr5:7759569-7759588 | MsG0580024653.01.T01:five_prime_UTR | 15.0% |
| !! | GAGTATTTGTTTATATATAA+GGG | + | Chr5:7758318-7758337 | None:intergenic | 15.0% |
| !! | TAAAGAGTAAAATACTTTAA+AGG | - | Chr5:7757172-7757191 | MsG0580024653.01.T01:intron | 15.0% |
| !!! | AGAGTATTTGTTTATATATA+AGG | + | Chr5:7758319-7758338 | None:intergenic | 15.0% |
| !!! | ATCTTTGTTATTAAAGTATT+AGG | + | Chr5:7757088-7757107 | None:intergenic | 15.0% |
| !!! | GAATTTAATCTCTAAAATAT+CGG | - | Chr5:7756986-7757005 | MsG0580024653.01.T01:CDS | 15.0% |
| !!! | TACTTTAAAGGTTAAATTAA+CGG | - | Chr5:7757184-7757203 | MsG0580024653.01.T01:intron | 15.0% |
| !! | AAGAAAATATGATTGCTTTA+AGG | + | Chr5:7757783-7757802 | None:intergenic | 20.0% |
| !! | AATGTATCTGATTCAAAATT+TGG | - | Chr5:7757580-7757599 | MsG0580024653.01.T01:intron | 20.0% |
| !! | ACATGTTAATGAATATAATG+TGG | - | Chr5:7758590-7758609 | MsG0580024653.01.T01:intron | 20.0% |
| !! | ATAAACAAATACTCTTGTAT+TGG | - | Chr5:7758324-7758343 | MsG0580024653.01.T01:intron | 20.0% |
| !! | CCATATTATGAATTCAAAAA+CGG | + | Chr5:7757950-7757969 | None:intergenic | 20.0% |
| !! | GTAACATAAAGTAAATTACA+TGG | + | Chr5:7759570-7759589 | None:intergenic | 20.0% |
| !! | GTACAATTAAGTATACTATT+TGG | + | Chr5:7758033-7758052 | None:intergenic | 20.0% |
| !! | TATATAATATCTCAAGTTCT+TGG | - | Chr5:7758113-7758132 | MsG0580024653.01.T01:CDS | 20.0% |
| !! | TATCTCTAGTTAATTTAGAT+TGG | - | Chr5:7759484-7759503 | MsG0580024653.01.T01:CDS | 20.0% |
| !! | TATGTAATATACATAACTAG+AGG | - | Chr5:7759515-7759534 | MsG0580024653.01.T01:exon | 20.0% |
| !! | TTTGGATAATATGCAAAAAA+TGG | + | Chr5:7758015-7758034 | None:intergenic | 20.0% |
| !!! | CTGATATGTGATTTTAAATA+TGG | - | Chr5:7757213-7757232 | MsG0580024653.01.T01:intron | 20.0% |
| !!! | GAATATAGTTTTAAAGAACT+CGG | + | Chr5:7757517-7757536 | None:intergenic | 20.0% |
| ! | AAATGACATAATATAGAGCA+TGG | + | Chr5:7757910-7757929 | None:intergenic | 25.0% |
| ! | ACTTGAGATATTATATAAGC+CGG | + | Chr5:7758110-7758129 | None:intergenic | 25.0% |
| ! | ATATACATAACTAGAGGAAA+CGG | - | Chr5:7759521-7759540 | MsG0580024653.01.T01:exon | 25.0% |
| ! | GCAAAAAATGGAAAAAGTTT+AGG | + | Chr5:7758003-7758022 | None:intergenic | 25.0% |
| ! | TAAGTGAGTTAGATTTATCA+AGG | - | Chr5:7759385-7759404 | MsG0580024653.01.T01:intron | 25.0% |
| ! | TAATCTTATTGAAGAACTCT+CGG | + | Chr5:7759073-7759092 | None:intergenic | 25.0% |
| ! | TAGAGGAATATGGATATATT+TGG | - | Chr5:7759238-7759257 | MsG0580024653.01.T01:intron | 25.0% |
| ! | TCTAACATTTACTCTCTTAT+TGG | + | Chr5:7758988-7759007 | None:intergenic | 25.0% |
| ! | TGTATTATGTTGAATGTAGT+TGG | - | Chr5:7757265-7757284 | MsG0580024653.01.T01:intron | 25.0% |
| ! | TTGTTTATATATAAGGGCAA+AGG | + | Chr5:7758312-7758331 | None:intergenic | 25.0% |
| !! | AATCCTATATGTTTGTTAAC+AGG | - | Chr5:7759150-7759169 | MsG0580024653.01.T01:intron | 25.0% |
| !! | ATAAAGAGTATAGAGGAATA+TGG | - | Chr5:7759228-7759247 | MsG0580024653.01.T01:intron | 25.0% |
| !! | ATTGTTCATAAAGAGTATAG+AGG | - | Chr5:7759221-7759240 | MsG0580024653.01.T01:intron | 25.0% |
| !! | GAATCAGTGTTGAAATAAAA+TGG | - | Chr5:7757235-7757254 | MsG0580024653.01.T01:intron | 25.0% |
| !! | TTCATTAACATGTGTTTCTA+AGG | + | Chr5:7758583-7758602 | None:intergenic | 25.0% |
| !! | TTGAGGTTTGATTTATAGTT+AGG | + | Chr5:7758823-7758842 | None:intergenic | 25.0% |
| !!! | CAATAATTTTTTAGATGGTG+TGG | - | Chr5:7757701-7757720 | MsG0580024653.01.T01:intron | 25.0% |
| !!! | CCGTTTTTGAATTCATAATA+TGG | - | Chr5:7757947-7757966 | MsG0580024653.01.T01:intron | 25.0% |
| !!! | GAAATGGTTTTGAATGTAAA+TGG | - | Chr5:7756843-7756862 | MsG0580024653.01.T01:three_prime_UTR | 25.0% |
| !!! | TGCAAAATCGATTTTTTCAT+AGG | - | Chr5:7759602-7759621 | MsG0580024653.01.T01:five_prime_UTR | 25.0% |
| !!! | TTCTCAATATGTTTAGTTTG+AGG | + | Chr5:7758840-7758859 | None:intergenic | 25.0% |
| AAAACGGTTGCATACATATA+CGG | + | Chr5:7757934-7757953 | None:intergenic | 30.0% | |
| AACAATCACTCTCTTATTGA+GGG | - | Chr5:7758894-7758913 | MsG0580024653.01.T01:CDS | 30.0% | |
| AATCCATATGCTTCAAAGTT+GGG | + | Chr5:7757630-7757649 | None:intergenic | 30.0% | |
| AATTGCAAATATGTCACAAG+TGG | - | Chr5:7758465-7758484 | MsG0580024653.01.T01:intron | 30.0% | |
| ACACTTAGGCTTATATTCAA+TGG | - | Chr5:7758155-7758174 | MsG0580024653.01.T01:CDS | 30.0% | |
| CAAAAAAGTTCTATGTAGAG+TGG | + | Chr5:7756946-7756965 | None:intergenic | 30.0% | |
| CATTCCTCAAATATAGTTAG+TGG | - | Chr5:7759036-7759055 | MsG0580024653.01.T01:intron | 30.0% | |
| CTTCTAAATGTTATGTTTGC+CGG | - | Chr5:7758790-7758809 | MsG0580024653.01.T01:intron | 30.0% | |
| GGAAGAGAAATTTCAATTGA+AGG | + | Chr5:7757982-7758001 | None:intergenic | 30.0% | |
| TAACAATCACTCTCTTATTG+AGG | - | Chr5:7758893-7758912 | MsG0580024653.01.T01:CDS | 30.0% | |
| TAAGAGAGTAAATGTTAGAG+AGG | - | Chr5:7758989-7759008 | MsG0580024653.01.T01:CDS | 30.0% | |
| TAATCCATATGCTTCAAAGT+TGG | + | Chr5:7757631-7757650 | None:intergenic | 30.0% | |
| TACTCTTTATGAACAATAGC+AGG | + | Chr5:7759218-7759237 | None:intergenic | 30.0% | |
| TAGAGAGGACATTAGAAAAA+AGG | - | Chr5:7759004-7759023 | MsG0580024653.01.T01:CDS | 30.0% | |
| TATCTTATGTTCGTCATTTC+TGG | - | Chr5:7758257-7758276 | MsG0580024653.01.T01:intron | 30.0% | |
| TATTTGGTATCAACAACTCT+TGG | - | Chr5:7759254-7759273 | MsG0580024653.01.T01:intron | 30.0% | |
| TCTTCAATCTATAATCTTGC+AGG | - | Chr5:7758082-7758101 | MsG0580024653.01.T01:CDS | 30.0% | |
| TTACATTCAAAACCATTTCG+TGG | + | Chr5:7756842-7756861 | None:intergenic | 30.0% | |
| TTATTGGATCAAACTCACAT+GGG | + | Chr5:7758972-7758991 | None:intergenic | 30.0% | |
| TTCCTTAAAGGAGTAGAAAA+TGG | - | Chr5:7759356-7759375 | MsG0580024653.01.T01:intron | 30.0% | |
| TTCTAAATGTTATGTTTGCC+GGG | - | Chr5:7758791-7758810 | MsG0580024653.01.T01:intron | 30.0% | |
| TTTATAGTTAGGTTCATACC+CGG | + | Chr5:7758812-7758831 | None:intergenic | 30.0% | |
| ! | ACAATAGTGTTGAAGATTGA+TGG | + | Chr5:7758521-7758540 | None:intergenic | 30.0% |
| ! | TTTTTGTCAATATCGCAGAT+TGG | - | Chr5:7758733-7758752 | MsG0580024653.01.T01:intron | 30.0% |
| AAATATGTCACAAGTGGACA+TGG | - | Chr5:7758471-7758490 | MsG0580024653.01.T01:intron | 35.0% | |
| AATATGTCACAAGTGGACAT+GGG | - | Chr5:7758472-7758491 | MsG0580024653.01.T01:intron | 35.0% | |
| ACGTACTTCTTGATATTTGC+AGG | - | Chr5:7757305-7757324 | MsG0580024653.01.T01:intron | 35.0% | |
| AGTTCTATGTAGAGTGGTTT+AGG | + | Chr5:7756940-7756959 | None:intergenic | 35.0% | |
| ATCCTGGGATTTCAATTGTT+TGG | - | Chr5:7757375-7757394 | MsG0580024653.01.T01:intron | 35.0% | |
| ATCTATAATCTTGCAGGTAC+CGG | - | Chr5:7758088-7758107 | MsG0580024653.01.T01:CDS | 35.0% | |
| CATATCACCGACAAAGAATA+AGG | + | Chr5:7756793-7756812 | None:intergenic | 35.0% | |
| CGTACTTCTTGATATTTGCA+GGG | - | Chr5:7757306-7757325 | MsG0580024653.01.T01:intron | 35.0% | |
| CTTAAAGGAGTAGAAAATGG+TGG | - | Chr5:7759359-7759378 | MsG0580024653.01.T01:intron | 35.0% | |
| CTTATTCTTTGTCGGTGATA+TGG | - | Chr5:7756791-7756810 | MsG0580024653.01.T01:three_prime_UTR | 35.0% | |
| CTTATTGGATCAAACTCACA+TGG | + | Chr5:7758973-7758992 | None:intergenic | 35.0% | |
| GCATCATCCTTATTCTTTGT+CGG | - | Chr5:7756783-7756802 | MsG0580024653.01.T01:three_prime_UTR | 35.0% | |
| GTGTCCACTAACTATATTTG+AGG | + | Chr5:7759043-7759062 | None:intergenic | 35.0% | |
| TAGGCTTATATTCAATGGCA+AGG | - | Chr5:7758160-7758179 | MsG0580024653.01.T01:CDS | 35.0% | |
| TCCTGGGATTTCAATTGTTT+GGG | - | Chr5:7757376-7757395 | MsG0580024653.01.T01:intron | 35.0% | |
| TGGCCTGTTAACAAACATAT+AGG | + | Chr5:7759156-7759175 | None:intergenic | 35.0% | |
| TTACCACTTTGTCATTGTCA+AGG | + | Chr5:7757352-7757371 | None:intergenic | 35.0% | |
| TTCATTGATGCTCCAGTAAT+TGG | + | Chr5:7759176-7759195 | None:intergenic | 35.0% | |
| TTTGTTAACAGGCCAATTAC+TGG | - | Chr5:7759161-7759180 | MsG0580024653.01.T01:intron | 35.0% | |
| ! | CACCATTTTCTACTCCTTTA+AGG | + | Chr5:7759361-7759380 | None:intergenic | 35.0% |
| ! | CATATTAACACGTGTCGTTA+AGG | + | Chr5:7758702-7758721 | None:intergenic | 35.0% |
| ! | TTCTACTCCTTTAAGGAAAG+AGG | + | Chr5:7759354-7759373 | None:intergenic | 35.0% |
| !!! | ATGGTTTTGGTTTACTCTGT+TGG | - | Chr5:7757410-7757429 | MsG0580024653.01.T01:intron | 35.0% |
| AAGCAATGGAAACCACGAAA+TGG | - | Chr5:7756827-7756846 | MsG0580024653.01.T01:three_prime_UTR | 40.0% | |
| AATATCGCAGATTGGTGAGT+TGG | - | Chr5:7758741-7758760 | MsG0580024653.01.T01:intron | 40.0% | |
| ACAAAGTGGTAACACATCCT+GGG | - | Chr5:7757360-7757379 | MsG0580024653.01.T01:intron | 40.0% | |
| ATACACACCTTCTGCAAAAG+AGG | + | Chr5:7756915-7756934 | None:intergenic | 40.0% | |
| CATGGGCATATACTTTCATC+CGG | - | Chr5:7759291-7759310 | MsG0580024653.01.T01:intron | 40.0% | |
| CATGTCGTCACAATTCAGTT+TGG | - | Chr5:7759097-7759116 | MsG0580024653.01.T01:intron | 40.0% | |
| CCTGGGATTTCAATTGTTTG+GGG | - | Chr5:7757377-7757396 | MsG0580024653.01.T01:intron | 40.0% | |
| CTCTTACTAATTTCACGCAC+TGG | + | Chr5:7759329-7759348 | None:intergenic | 40.0% | |
| GAACCTTGACAATGACAAAG+TGG | - | Chr5:7757346-7757365 | MsG0580024653.01.T01:intron | 40.0% | |
| GAATTGGGTATCACCTAAAG+TGG | + | Chr5:7758937-7758956 | None:intergenic | 40.0% | |
| GATGTTATGCGTGACTATGA+TGG | - | Chr5:7757666-7757685 | MsG0580024653.01.T01:intron | 40.0% | |
| GATTTATCAAGGATTGCACG+AGG | - | Chr5:7759396-7759415 | MsG0580024653.01.T01:intron | 40.0% | |
| GCTGATCATTCATCAAGCAA+TGG | - | Chr5:7756813-7756832 | MsG0580024653.01.T01:three_prime_UTR | 40.0% | |
| TACTCTGTTGGTCACATTTC+TGG | - | Chr5:7757422-7757441 | MsG0580024653.01.T01:intron | 40.0% | |
| TCTTATTGAGGGAACTCATG+TGG | - | Chr5:7758905-7758924 | MsG0580024653.01.T01:CDS | 40.0% | |
| TGAATTCAACCACAAATGCC+TGG | + | Chr5:7758226-7758245 | None:intergenic | 40.0% | |
| TTCGCATATAAAGCACACGA+CGG | + | Chr5:7757539-7757558 | None:intergenic | 40.0% | |
| ! | GCATGACTCATCACACTTTT+GGG | + | Chr5:7756877-7756896 | None:intergenic | 40.0% |
| ! | TATGTTCGTCATTTCTGGAG+TGG | - | Chr5:7758262-7758281 | MsG0580024653.01.T01:intron | 40.0% |
| ! | TGCATGACTCATCACACTTT+TGG | + | Chr5:7756878-7756897 | None:intergenic | 40.0% |
| !! | AAGAGTGCCTCTTTCCTTAA+AGG | - | Chr5:7759344-7759363 | MsG0580024653.01.T01:intron | 40.0% |
| !! | AGACCCAACTTTGAAGCATA+TGG | - | Chr5:7757624-7757643 | MsG0580024653.01.T01:intron | 40.0% |
| !! | CAGGAAGTGTTCCTGAAAAA+TGG | + | Chr5:7758190-7758209 | None:intergenic | 40.0% |
| !! | GGCAAGGAAAACCATTTTTC+AGG | - | Chr5:7758176-7758195 | MsG0580024653.01.T01:CDS | 40.0% |
| !! | TTGAATGTAGTTGGTAGCAG+AGG | - | Chr5:7757274-7757293 | MsG0580024653.01.T01:intron | 40.0% |
| AGTAGATCCAACTGCAAGTC+CGG | + | Chr5:7758767-7758786 | None:intergenic | 45.0% | |
| ATATGCCCATGTACCAGCTA+TGG | + | Chr5:7759282-7759301 | None:intergenic | 45.0% | |
| CAAAAGGTTTCCGGTTAAGC+AGG | - | Chr5:7757487-7757506 | MsG0580024653.01.T01:intron | 45.0% | |
| CATGTGGATCACACCACTTT+AGG | - | Chr5:7758921-7758940 | MsG0580024653.01.T01:CDS | 45.0% | |
| CCCCAAACAATTGAAATCCC+AGG | + | Chr5:7757380-7757399 | None:intergenic | 45.0% | |
| CTCTTGCAAGTGGAACACTT+AGG | - | Chr5:7758141-7758160 | MsG0580024653.01.T01:CDS | 45.0% | |
| CTTGGATCAACTCTTGCAAG+TGG | - | Chr5:7758131-7758150 | MsG0580024653.01.T01:CDS | 45.0% | |
| GACAAAGTGGTAACACATCC+TGG | - | Chr5:7757359-7757378 | MsG0580024653.01.T01:intron | 45.0% | |
| GGAGATTACCGCTCTATTGT+CGG | + | Chr5:7758291-7758310 | None:intergenic | 45.0% | |
| TGCATCCACCAAAAGGTTTC+CGG | - | Chr5:7757478-7757497 | MsG0580024653.01.T01:intron | 45.0% | |
| TTCTGATCTCCAGGCATTTG+TGG | - | Chr5:7758214-7758233 | MsG0580024653.01.T01:CDS | 45.0% | |
| TTGCTCATGCATCCACCAAA+AGG | - | Chr5:7757471-7757490 | MsG0580024653.01.T01:intron | 45.0% | |
| ! | CTATGTGCCTCTTTTGCAGA+AGG | - | Chr5:7756905-7756924 | MsG0580024653.01.T01:three_prime_UTR | 45.0% |
| ! | CTGCTTAACCGGAAACCTTT+TGG | + | Chr5:7757489-7757508 | None:intergenic | 45.0% |
| ! | CTTAACCGGAAACCTTTTGG+TGG | + | Chr5:7757486-7757505 | None:intergenic | 45.0% |
| ! | GCAAAAGAGGCACATAGTCT+TGG | + | Chr5:7756902-7756921 | None:intergenic | 45.0% |
| ! | GGGTCTCACTGTTATGGTTT+TGG | - | Chr5:7757397-7757416 | MsG0580024653.01.T01:intron | 45.0% |
| ! | TGTTTGGGGTCTCACTGTTA+TGG | - | Chr5:7757391-7757410 | MsG0580024653.01.T01:intron | 45.0% |
| ! | TTTGGTGGATGCATGAGCAA+TGG | + | Chr5:7757471-7757490 | None:intergenic | 45.0% |
| !! | GGGTCTCACACTTTGGAATT+GGG | + | Chr5:7758952-7758971 | None:intergenic | 45.0% |
| !! | TAGTTGGTAGCAGAGGTTGT+GGG | - | Chr5:7757281-7757300 | MsG0580024653.01.T01:intron | 45.0% |
| !! | TGGGTCTCACACTTTGGAAT+TGG | + | Chr5:7758953-7758972 | None:intergenic | 45.0% |
| !! | TTTTCAGGAACACTTCCTGC+TGG | - | Chr5:7758191-7758210 | MsG0580024653.01.T01:CDS | 45.0% |
| ACTCGGATCACCTGCTTAAC+CGG | + | Chr5:7757500-7757519 | None:intergenic | 50.0% | |
| ATGAACCCTGCAAGGAGCTT+AGG | - | Chr5:7759191-7759210 | MsG0580024653.01.T01:intron | 50.0% | |
| CTCACATGGGTCTCACACTT+TGG | + | Chr5:7758959-7758978 | None:intergenic | 50.0% | |
| GAGCATCAATGAACCCTGCA+AGG | - | Chr5:7759183-7759202 | MsG0580024653.01.T01:intron | 50.0% | |
| GATTACCGCTCTATTGTCGG+TGG | + | Chr5:7758288-7758307 | None:intergenic | 50.0% | |
| !! | ACAACTCTTGGTGCCATAGC+TGG | - | Chr5:7759266-7759285 | MsG0580024653.01.T01:intron | 50.0% |
| !! | AGTTGGTAGCAGAGGTTGTG+GGG | - | Chr5:7757282-7757301 | MsG0580024653.01.T01:intron | 50.0% |
| !! | GCACTGGCTTGTTTGTGTAC+CGG | + | Chr5:7759313-7759332 | None:intergenic | 50.0% |
| !! | GTAGTTGGTAGCAGAGGTTG+TGG | - | Chr5:7757280-7757299 | MsG0580024653.01.T01:intron | 50.0% |
| !! | TGGTGCCATAGCTGGTACAT+GGG | - | Chr5:7759274-7759293 | MsG0580024653.01.T01:intron | 50.0% |
| !! | TTGGTGCCATAGCTGGTACA+TGG | - | Chr5:7759273-7759292 | MsG0580024653.01.T01:intron | 50.0% |
| AGTGGCCACCGACAATAGAG+CGG | - | Chr5:7758280-7758299 | MsG0580024653.01.T01:intron | 55.0% | |
| CAGGTCCTAAGCTCCTTGCA+GGG | + | Chr5:7759199-7759218 | None:intergenic | 55.0% | |
| GCATGAGCAATGGTGACAGC+AGG | + | Chr5:7757461-7757480 | None:intergenic | 55.0% | |
| ! | TCGCAGATTGGTGAGTTGGC+CGG | - | Chr5:7758745-7758764 | MsG0580024653.01.T01:intron | 55.0% |
| !! | TCCTGCTGGTTCTGATCTCC+AGG | - | Chr5:7758205-7758224 | MsG0580024653.01.T01:CDS | 55.0% |
| GAGTTGGCCGGACTTGCAGT+TGG | - | Chr5:7758757-7758776 | MsG0580024653.01.T01:intron | 60.0% | |
| GCAGGTCCTAAGCTCCTTGC+AGG | + | Chr5:7759200-7759219 | None:intergenic | 60.0% | |
| GCCTGGAGATCAGAACCAGC+AGG | + | Chr5:7758209-7758228 | None:intergenic | 60.0% | |
| ! | TGCAGGGTGTGCTGCTGTTG+TGG | - | Chr5:7757322-7757341 | MsG0580024653.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 7756717 | 7759621 | 7756717 | ID=MsG0580024653.01;Name=MsG0580024653.01 |
| Chr5 | mRNA | 7756717 | 7759621 | 7756717 | ID=MsG0580024653.01.T01;Parent=MsG0580024653.01;Name=MsG0580024653.01.T01;_AED=0.32;_eAED=0.32;_QI=93|1|1|1|1|1|5|230|273 |
| Chr5 | exon | 7759412 | 7759621 | 7759412 | ID=MsG0580024653.01.T01:exon:8028;Parent=MsG0580024653.01.T01 |
| Chr5 | exon | 7758830 | 7759054 | 7758830 | ID=MsG0580024653.01.T01:exon:8029;Parent=MsG0580024653.01.T01 |
| Chr5 | exon | 7758037 | 7758234 | 7758037 | ID=MsG0580024653.01.T01:exon:8030;Parent=MsG0580024653.01.T01 |
| Chr5 | exon | 7757526 | 7757587 | 7757526 | ID=MsG0580024653.01.T01:exon:8031;Parent=MsG0580024653.01.T01 |
| Chr5 | exon | 7756717 | 7757166 | 7756717 | ID=MsG0580024653.01.T01:exon:8032;Parent=MsG0580024653.01.T01 |
| Chr5 | five_prime_UTR | 7759529 | 7759621 | 7759529 | ID=MsG0580024653.01.T01:five_prime_utr;Parent=MsG0580024653.01.T01 |
| Chr5 | CDS | 7759412 | 7759528 | 7759412 | ID=MsG0580024653.01.T01:cds;Parent=MsG0580024653.01.T01 |
| Chr5 | CDS | 7758830 | 7759054 | 7758830 | ID=MsG0580024653.01.T01:cds;Parent=MsG0580024653.01.T01 |
| Chr5 | CDS | 7758037 | 7758234 | 7758037 | ID=MsG0580024653.01.T01:cds;Parent=MsG0580024653.01.T01 |
| Chr5 | CDS | 7757526 | 7757587 | 7757526 | ID=MsG0580024653.01.T01:cds;Parent=MsG0580024653.01.T01 |
| Chr5 | CDS | 7756947 | 7757166 | 7756947 | ID=MsG0580024653.01.T01:cds;Parent=MsG0580024653.01.T01 |
| Chr5 | three_prime_UTR | 7756717 | 7756946 | 7756717 | ID=MsG0580024653.01.T01:three_prime_utr;Parent=MsG0580024653.01.T01 |
| Gene Sequence |
| Protein sequence |
