Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015447.01.T01 | AAB86380.1 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015447.01.T01 | P25794 | 91.349 | 289 | 25 | 0 | 1 | 289 | 1 | 289 | 0 | 544 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015447.01.T01 | O22339 | 99.655 | 290 | 1 | 0 | 1 | 290 | 1 | 290 | 0.0 | 589 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015447.01.T01 | MTR_3g070210 | 99.310 | 290 | 2 | 0 | 1 | 290 | 1 | 290 | 0.0 | 587 |
| MsG0380015447.01.T01 | MTR_5g082070 | 93.080 | 289 | 20 | 0 | 1 | 289 | 1 | 289 | 0.0 | 550 |
| MsG0380015447.01.T01 | MTR_3g070210 | 98.473 | 262 | 4 | 0 | 1 | 262 | 1 | 262 | 0.0 | 526 |
| MsG0380015447.01.T01 | MTR_8g098375 | 88.070 | 285 | 32 | 1 | 4 | 288 | 3 | 285 | 0.0 | 510 |
| MsG0380015447.01.T01 | MTR_5g010150 | 84.321 | 287 | 43 | 1 | 4 | 290 | 3 | 287 | 4.94e-179 | 495 |
| MsG0380015447.01.T01 | MTR_4g415300 | 80.690 | 290 | 54 | 2 | 1 | 289 | 1 | 289 | 1.42e-172 | 479 |
| MsG0380015447.01.T01 | MTR_3g070210 | 99.061 | 213 | 2 | 0 | 1 | 213 | 1 | 213 | 3.94e-156 | 434 |
| MsG0380015447.01.T01 | MTR_7g101190 | 72.481 | 258 | 64 | 2 | 32 | 283 | 16 | 272 | 1.50e-135 | 385 |
| MsG0380015447.01.T01 | MTR_3g118010 | 71.264 | 261 | 74 | 1 | 28 | 288 | 10 | 269 | 6.62e-134 | 380 |
| MsG0380015447.01.T01 | MTR_2g094270 | 68.182 | 264 | 76 | 2 | 32 | 288 | 17 | 279 | 3.66e-132 | 376 |
| MsG0380015447.01.T01 | MTR_8g098375 | 81.659 | 229 | 38 | 2 | 4 | 230 | 3 | 229 | 9.34e-132 | 373 |
| MsG0380015447.01.T01 | MTR_4g059390 | 65.217 | 276 | 89 | 2 | 19 | 288 | 3 | 277 | 3.50e-131 | 374 |
| MsG0380015447.01.T01 | MTR_5g010150 | 82.381 | 210 | 35 | 1 | 4 | 213 | 3 | 210 | 2.76e-124 | 353 |
| MsG0380015447.01.T01 | MTR_4g415300 | 77.570 | 214 | 46 | 2 | 1 | 213 | 1 | 213 | 1.12e-118 | 340 |
| MsG0380015447.01.T01 | MTR_2g094270 | 69.362 | 235 | 64 | 2 | 32 | 259 | 17 | 250 | 2.15e-117 | 338 |
| MsG0380015447.01.T01 | MTR_1g095070 | 76.757 | 185 | 42 | 1 | 99 | 283 | 23 | 206 | 1.55e-99 | 291 |
| MsG0380015447.01.T01 | MTR_4g059390 | 63.682 | 201 | 66 | 2 | 19 | 213 | 3 | 202 | 2.72e-88 | 262 |
| MsG0380015447.01.T01 | MTR_1g095070 | 77.019 | 161 | 36 | 1 | 99 | 259 | 23 | 182 | 1.58e-84 | 252 |
| MsG0380015447.01.T01 | MTR_1g077540 | 35.270 | 241 | 137 | 6 | 55 | 290 | 21 | 247 | 2.71e-31 | 117 |
| MsG0380015447.01.T01 | MTR_2g101370 | 34.615 | 234 | 138 | 5 | 50 | 280 | 15 | 236 | 5.27e-31 | 116 |
| MsG0380015447.01.T01 | MTR_6g069040 | 37.872 | 235 | 130 | 6 | 55 | 285 | 21 | 243 | 5.39e-31 | 116 |
| MsG0380015447.01.T01 | MTR_8g013680 | 35.622 | 233 | 133 | 7 | 50 | 277 | 12 | 232 | 2.42e-29 | 112 |
| MsG0380015447.01.T01 | MTR_5g012810 | 35.841 | 226 | 129 | 5 | 55 | 277 | 19 | 231 | 3.75e-29 | 111 |
| MsG0380015447.01.T01 | MTR_4g063090 | 34.025 | 241 | 136 | 6 | 44 | 277 | 10 | 234 | 4.05e-28 | 108 |
| MsG0380015447.01.T01 | MTR_7g103030 | 33.891 | 239 | 142 | 6 | 45 | 280 | 11 | 236 | 7.25e-28 | 108 |
| MsG0380015447.01.T01 | MTR_1g115405 | 33.871 | 248 | 136 | 8 | 44 | 281 | 10 | 239 | 1.46e-27 | 107 |
| MsG0380015447.01.T01 | MTR_1g006490 | 32.895 | 228 | 138 | 6 | 47 | 273 | 11 | 224 | 7.18e-25 | 100 |
| MsG0380015447.01.T01 | MTR_7g023350 | 31.950 | 241 | 141 | 6 | 44 | 277 | 10 | 234 | 8.37e-24 | 97.4 |
| MsG0380015447.01.T01 | MTR_1g006590 | 31.897 | 232 | 127 | 9 | 55 | 277 | 19 | 228 | 4.32e-23 | 95.5 |
| MsG0380015447.01.T01 | MTR_4g084880 | 28.182 | 220 | 138 | 5 | 58 | 274 | 38 | 240 | 1.42e-20 | 89.4 |
| MsG0380015447.01.T01 | MTR_2g060360 | 32.000 | 250 | 128 | 10 | 55 | 290 | 19 | 240 | 3.84e-20 | 87.8 |
| MsG0380015447.01.T01 | MTR_5g079570 | 25.969 | 258 | 166 | 6 | 26 | 278 | 9 | 246 | 1.11e-18 | 84.0 |
| MsG0380015447.01.T01 | MTR_8g087710 | 26.236 | 263 | 177 | 6 | 26 | 287 | 10 | 256 | 2.93e-18 | 82.8 |
| MsG0380015447.01.T01 | MTR_2g017660 | 29.167 | 216 | 131 | 6 | 58 | 270 | 42 | 238 | 3.83e-18 | 82.8 |
| MsG0380015447.01.T01 | MTR_2g017590 | 32.710 | 214 | 126 | 7 | 58 | 270 | 39 | 235 | 1.49e-17 | 80.9 |
| MsG0380015447.01.T01 | MTR_4g006730 | 28.279 | 244 | 147 | 8 | 37 | 280 | 68 | 283 | 1.63e-17 | 81.3 |
| MsG0380015447.01.T01 | MTR_5g063930 | 30.043 | 233 | 140 | 7 | 50 | 278 | 32 | 245 | 2.15e-17 | 80.5 |
| MsG0380015447.01.T01 | MTR_4g075570 | 30.224 | 268 | 151 | 13 | 38 | 282 | 27 | 281 | 2.58e-17 | 81.3 |
| MsG0380015447.01.T01 | MTR_8g087720 | 27.074 | 229 | 151 | 5 | 52 | 280 | 35 | 247 | 3.43e-17 | 79.7 |
| MsG0380015447.01.T01 | MTR_2g017620 | 31.963 | 219 | 131 | 7 | 53 | 270 | 22 | 223 | 8.84e-17 | 78.6 |
| MsG0380015447.01.T01 | MTR_2g017620 | 31.963 | 219 | 131 | 7 | 53 | 270 | 36 | 237 | 1.08e-16 | 78.6 |
| MsG0380015447.01.T01 | MTR_7g010650 | 27.948 | 229 | 146 | 6 | 53 | 280 | 35 | 245 | 2.25e-16 | 77.8 |
| MsG0380015447.01.T01 | MTR_2g104940 | 29.279 | 222 | 140 | 6 | 59 | 280 | 84 | 288 | 3.10e-16 | 77.8 |
| MsG0380015447.01.T01 | MTR_3g008920 | 28.042 | 189 | 117 | 4 | 92 | 277 | 59 | 231 | 3.15e-15 | 74.3 |
| MsG0380015447.01.T01 | MTR_2g017610 | 30.047 | 213 | 133 | 5 | 58 | 270 | 41 | 237 | 4.11e-15 | 73.9 |
| MsG0380015447.01.T01 | MTR_4g075590 | 25.911 | 247 | 164 | 7 | 47 | 282 | 29 | 267 | 7.43e-15 | 73.9 |
| MsG0380015447.01.T01 | MTR_2g017570 | 30.093 | 216 | 129 | 6 | 58 | 270 | 41 | 237 | 9.82e-15 | 73.2 |
| MsG0380015447.01.T01 | MTR_4g006630 | 28.079 | 203 | 126 | 5 | 78 | 280 | 14 | 196 | 2.01e-14 | 71.2 |
| MsG0380015447.01.T01 | MTR_4g006730 | 27.461 | 193 | 120 | 5 | 78 | 270 | 14 | 186 | 8.28e-14 | 69.3 |
| MsG0380015447.01.T01 | MTR_1g070385 | 27.193 | 228 | 141 | 6 | 52 | 275 | 59 | 265 | 1.97e-13 | 70.9 |
| MsG0380015447.01.T01 | MTR_1g097840 | 26.126 | 222 | 147 | 6 | 59 | 280 | 78 | 282 | 4.47e-13 | 68.6 |
| MsG0380015447.01.T01 | MTR_2g017620 | 32.738 | 168 | 98 | 5 | 104 | 270 | 3 | 156 | 9.48e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015447.01.T01 | AT4G00430 | 84.828 | 290 | 41 | 2 | 1 | 290 | 1 | 287 | 2.13e-180 | 498 |
| MsG0380015447.01.T01 | AT2G45960 | 83.448 | 290 | 44 | 2 | 1 | 290 | 1 | 286 | 3.63e-177 | 490 |
| MsG0380015447.01.T01 | AT4G23400 | 84.483 | 290 | 42 | 2 | 1 | 290 | 1 | 287 | 1.62e-169 | 471 |
| MsG0380015447.01.T01 | AT3G61430 | 83.793 | 290 | 43 | 2 | 1 | 290 | 1 | 286 | 2.76e-167 | 465 |
| MsG0380015447.01.T01 | AT3G61430 | 83.793 | 290 | 43 | 2 | 1 | 290 | 1 | 286 | 2.76e-167 | 465 |
| MsG0380015447.01.T01 | AT1G01620 | 83.448 | 290 | 44 | 2 | 1 | 290 | 1 | 286 | 1.61e-166 | 463 |
| MsG0380015447.01.T01 | AT2G45960 | 83.398 | 259 | 39 | 2 | 1 | 259 | 1 | 255 | 4.62e-156 | 436 |
| MsG0380015447.01.T01 | AT2G45960 | 83.398 | 259 | 39 | 2 | 1 | 259 | 1 | 255 | 6.56e-155 | 434 |
| MsG0380015447.01.T01 | AT2G37180 | 71.863 | 263 | 67 | 3 | 32 | 288 | 14 | 275 | 4.67e-133 | 379 |
| MsG0380015447.01.T01 | AT4G35100 | 71.318 | 258 | 73 | 1 | 31 | 288 | 14 | 270 | 2.87e-132 | 376 |
| MsG0380015447.01.T01 | AT4G35100 | 71.318 | 258 | 73 | 1 | 31 | 288 | 14 | 270 | 2.87e-132 | 376 |
| MsG0380015447.01.T01 | AT2G37170 | 71.483 | 263 | 68 | 3 | 32 | 288 | 57 | 318 | 4.88e-132 | 377 |
| MsG0380015447.01.T01 | AT2G37170 | 71.483 | 263 | 68 | 3 | 32 | 288 | 14 | 275 | 5.53e-132 | 376 |
| MsG0380015447.01.T01 | AT3G53420 | 71.483 | 263 | 68 | 3 | 32 | 288 | 16 | 277 | 7.63e-132 | 375 |
| MsG0380015447.01.T01 | AT3G53420 | 71.483 | 263 | 68 | 3 | 32 | 288 | 16 | 277 | 7.63e-132 | 375 |
| MsG0380015447.01.T01 | AT2G16850 | 69.318 | 264 | 80 | 1 | 25 | 288 | 6 | 268 | 1.09e-130 | 372 |
| MsG0380015447.01.T01 | AT3G54820 | 68.679 | 265 | 76 | 2 | 30 | 288 | 13 | 276 | 1.53e-130 | 372 |
| MsG0380015447.01.T01 | AT1G01620 | 85.116 | 215 | 31 | 1 | 76 | 290 | 1 | 214 | 6.32e-129 | 365 |
| MsG0380015447.01.T01 | AT5G60660 | 68.441 | 263 | 76 | 2 | 32 | 288 | 16 | 277 | 4.08e-128 | 366 |
| MsG0380015447.01.T01 | AT2G39010 | 66.792 | 265 | 81 | 2 | 30 | 288 | 13 | 276 | 1.56e-127 | 365 |
| MsG0380015447.01.T01 | AT4G00430 | 82.028 | 217 | 36 | 2 | 1 | 217 | 1 | 214 | 1.53e-126 | 359 |
| MsG0380015447.01.T01 | AT2G39010 | 62.437 | 197 | 67 | 2 | 23 | 213 | 6 | 201 | 6.23e-83 | 249 |
| MsG0380015447.01.T01 | AT3G16240 | 35.498 | 231 | 134 | 5 | 50 | 277 | 14 | 232 | 4.30e-31 | 117 |
| MsG0380015447.01.T01 | AT1G73190 | 35.918 | 245 | 126 | 9 | 55 | 285 | 24 | 251 | 8.40e-31 | 116 |
| MsG0380015447.01.T01 | AT1G17810 | 35.593 | 236 | 130 | 7 | 55 | 281 | 24 | 246 | 1.00e-30 | 116 |
| MsG0380015447.01.T01 | AT5G47450 | 36.638 | 232 | 130 | 7 | 50 | 277 | 14 | 232 | 7.08e-30 | 113 |
| MsG0380015447.01.T01 | AT4G01470 | 34.694 | 245 | 136 | 7 | 45 | 281 | 11 | 239 | 3.14e-29 | 112 |
| MsG0380015447.01.T01 | AT2G36830 | 35.102 | 245 | 132 | 10 | 44 | 279 | 10 | 236 | 1.42e-27 | 107 |
| MsG0380015447.01.T01 | AT3G26520 | 34.335 | 233 | 130 | 7 | 55 | 280 | 22 | 238 | 1.96e-26 | 104 |
| MsG0380015447.01.T01 | AT4G17340 | 34.802 | 227 | 131 | 6 | 55 | 277 | 19 | 232 | 1.98e-26 | 104 |
| MsG0380015447.01.T01 | AT2G25810 | 33.913 | 230 | 134 | 8 | 55 | 281 | 19 | 233 | 3.10e-24 | 98.6 |
| MsG0380015447.01.T01 | AT3G47440 | 32.377 | 244 | 122 | 11 | 55 | 281 | 23 | 240 | 4.87e-22 | 92.8 |
| MsG0380015447.01.T01 | AT1G31885 | 29.084 | 251 | 149 | 8 | 26 | 270 | 22 | 249 | 9.12e-19 | 85.1 |
| MsG0380015447.01.T01 | AT4G19030 | 27.397 | 292 | 185 | 9 | 2 | 288 | 11 | 280 | 1.92e-18 | 84.0 |
| MsG0380015447.01.T01 | AT5G37820 | 29.730 | 185 | 113 | 5 | 87 | 269 | 72 | 241 | 3.40e-16 | 77.4 |
| MsG0380015447.01.T01 | AT5G37820 | 29.730 | 185 | 113 | 5 | 87 | 269 | 108 | 277 | 3.76e-16 | 77.8 |
| MsG0380015447.01.T01 | AT4G18910 | 28.279 | 244 | 160 | 6 | 41 | 280 | 36 | 268 | 2.92e-15 | 74.7 |
| MsG0380015447.01.T01 | AT1G31885 | 28.571 | 196 | 122 | 5 | 81 | 270 | 12 | 195 | 9.07e-15 | 73.2 |
| MsG0380015447.01.T01 | AT1G80760 | 26.908 | 249 | 162 | 7 | 32 | 280 | 60 | 288 | 9.17e-15 | 73.6 |
| MsG0380015447.01.T01 | AT4G10380 | 25.670 | 261 | 162 | 7 | 33 | 278 | 41 | 284 | 1.38e-14 | 73.2 |
| MsG0380015447.01.T01 | AT2G34390 | 25.887 | 282 | 182 | 9 | 6 | 280 | 2 | 263 | 3.77e-14 | 71.6 |
| MsG0380015447.01.T01 | AT3G06100 | 27.660 | 235 | 147 | 8 | 55 | 285 | 46 | 261 | 8.63e-13 | 67.4 |
| MsG0380015447.01.T01 | AT2G34390 | 27.111 | 225 | 150 | 7 | 58 | 280 | 9 | 221 | 1.86e-12 | 66.2 |
| MsG0380015447.01.T01 | AT5G37810 | 26.203 | 187 | 117 | 5 | 87 | 269 | 72 | 241 | 3.72e-12 | 65.9 |
| MsG0380015447.01.T01 | AT3G06100 | 27.778 | 234 | 143 | 8 | 58 | 288 | 1 | 211 | 3.79e-12 | 65.1 |
Find 122 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGAATATTATAGAATT+TGG | 0.168305 | 3:+70298655 | None:intergenic |
| CAAGGAATTGCTTGGTCTTT+TGG | 0.175483 | 3:-70298182 | MsG0380015447.01.T01:CDS |
| AACATCCTTTACATACAAAA+AGG | 0.203780 | 3:+70296585 | None:intergenic |
| GGGACATGGGTGGTGGGTGG+TGG | 0.205512 | 3:+70298614 | None:intergenic |
| ACTGTTAACTCTTGTGTATT+GGG | 0.278940 | 3:-70296342 | MsG0380015447.01.T01:three_prime_UTR |
| CTGTGGTGCTGGTGTGGTTA+AGG | 0.288319 | 3:-70297418 | MsG0380015447.01.T01:CDS |
| AGAGTGAGTTATTATTATTA+AGG | 0.306005 | 3:+70298577 | None:intergenic |
| CATCACTATCTTGACTGTTA+TGG | 0.322601 | 3:-70298246 | MsG0380015447.01.T01:CDS |
| AGTGACATTCGGTTTGTTCT+TGG | 0.325309 | 3:-70297502 | MsG0380015447.01.T01:CDS |
| AACTGTTAACTCTTGTGTAT+TGG | 0.333620 | 3:-70296343 | MsG0380015447.01.T01:three_prime_UTR |
| ATACCAATTGGTTGTCTCTC+TGG | 0.333635 | 3:+70298407 | None:intergenic |
| AGCCTTCTGAGCTCACTTCA+TGG | 0.336223 | 3:-70298322 | MsG0380015447.01.T01:CDS |
| TGTGGTGCTGGTGTGGTTAA+GGG | 0.341527 | 3:-70297417 | MsG0380015447.01.T01:CDS |
| TTCTGGGTTGGACCATTCAT+TGG | 0.343204 | 3:-70296766 | MsG0380015447.01.T01:CDS |
| ATTATCTTCAACAAAGATCT+TGG | 0.350263 | 3:-70296914 | MsG0380015447.01.T01:CDS |
| ATCACTATCTTGACTGTTAT+GGG | 0.365827 | 3:-70298245 | MsG0380015447.01.T01:CDS |
| TGTAAAACTGTTGGTATTCA+AGG | 0.380854 | 3:-70298200 | MsG0380015447.01.T01:CDS |
| TTGATACCAGTTCCAGTGAT+TGG | 0.381840 | 3:+70296962 | None:intergenic |
| GTGGTGAGTGCGTTGGGTGA+TGG | 0.383773 | 3:-70296529 | MsG0380015447.01.T01:three_prime_UTR |
| GTGTAATGATTATTATTGTT+AGG | 0.391798 | 3:-70296551 | MsG0380015447.01.T01:three_prime_UTR |
| AACTCTTGTGTATTGGGCAT+TGG | 0.392149 | 3:-70296336 | MsG0380015447.01.T01:three_prime_UTR |
| TAAAGAACAAGATGTTTCAT+TGG | 0.400740 | 3:-70298444 | MsG0380015447.01.T01:CDS |
| TACTGTACCGCTGGTATCTC+TGG | 0.404434 | 3:-70298137 | MsG0380015447.01.T01:intron |
| GGACATGGGTGGTGGGTGGT+GGG | 0.404853 | 3:+70298615 | None:intergenic |
| TCCTTCTCAAATCCTGTGTC+TGG | 0.407697 | 3:-70296369 | MsG0380015447.01.T01:three_prime_UTR |
| CTTGGTGCTATCTGTGGTGC+TGG | 0.411516 | 3:-70297429 | MsG0380015447.01.T01:CDS |
| GGTGCTAACTTTGTTGCCCC+TGG | 0.413480 | 3:-70297357 | MsG0380015447.01.T01:CDS |
| TACAGGAACGTGGGAGTCTC+TGG | 0.414634 | 3:+70297242 | None:intergenic |
| TGATACCAGTTCCAGTGATT+GGG | 0.425209 | 3:+70296963 | None:intergenic |
| TGTTAGGTGGTGAGTGCGTT+GGG | 0.429870 | 3:-70296535 | MsG0380015447.01.T01:three_prime_UTR |
| TCATGGTCTTTCTACAGAGC+TGG | 0.430662 | 3:-70298305 | MsG0380015447.01.T01:CDS |
| CAAAACCAAGCCAACTTTGT+GGG | 0.437982 | 3:-70296647 | MsG0380015447.01.T01:three_prime_UTR |
| AGAAAGTGGGACATGGGTGG+TGG | 0.438365 | 3:+70298607 | None:intergenic |
| ATCAACCCTGCTAGGAGTCT+TGG | 0.440510 | 3:-70296944 | MsG0380015447.01.T01:CDS |
| GTTGCCCCTGGTTACACTAA+AGG | 0.441082 | 3:-70297345 | MsG0380015447.01.T01:CDS |
| GGAGTCTCTGGCGCTACGCT+TGG | 0.442884 | 3:+70297254 | None:intergenic |
| AGTGGGACATGGGTGGTGGG+TGG | 0.452016 | 3:+70298611 | None:intergenic |
| TCTTCAACAAAGATCTTGGT+TGG | 0.452168 | 3:-70296910 | MsG0380015447.01.T01:CDS |
| TGTAGTCCTTTCCATCATCA+TGG | 0.459789 | 3:+70298372 | None:intergenic |
| AGTTCCAGTGATTGGGATAG+TGG | 0.463096 | 3:+70296970 | None:intergenic |
| ACTATCCCAATCACTGGAAC+TGG | 0.463239 | 3:-70296968 | MsG0380015447.01.T01:CDS |
| GATATATATGGTGCCACAGC+TGG | 0.465795 | 3:-70296276 | MsG0380015447.01.T01:three_prime_UTR |
| TAAAACCCACAAAGTTGGCT+TGG | 0.466445 | 3:+70296642 | None:intergenic |
| AAAGAACAAGATGTTTCATT+GGG | 0.468564 | 3:-70298443 | MsG0380015447.01.T01:CDS |
| TACCAATTGGTTGTCTCTCT+GGG | 0.469628 | 3:+70298408 | None:intergenic |
| TGGTGAGTGCGTTGGGTGAT+GGG | 0.469893 | 3:-70296528 | MsG0380015447.01.T01:three_prime_UTR |
| CTCTGAGCTGCAATACCAAT+TGG | 0.474372 | 3:+70298395 | None:intergenic |
| AACAAACCGAATGTCACTGC+TGG | 0.475621 | 3:+70297507 | None:intergenic |
| TGGGCATTGGCTTCTTCCAT+AGG | 0.477499 | 3:-70296323 | MsG0380015447.01.T01:three_prime_UTR |
| CTTGGCACATACTTATCCTA+TGG | 0.478381 | 3:+70296307 | None:intergenic |
| GAAGGCTCAAACAATGGTGC+TGG | 0.478809 | 3:+70298338 | None:intergenic |
| TAAAATAAAACCCACAAAGT+TGG | 0.480980 | 3:+70296637 | None:intergenic |
| CAACAATACATCACCACACA+TGG | 0.480995 | 3:+70296458 | None:intergenic |
| GAAATAATTAAAACCAGATA+AGG | 0.484007 | 3:+70296608 | None:intergenic |
| AATTAATTACTTGACTTGAA+AGG | 0.484353 | 3:+70296697 | None:intergenic |
| AGCTCAGAAGGCTCAAACAA+TGG | 0.493164 | 3:+70298332 | None:intergenic |
| TCAAACAATGGTGCTGGAGG+TGG | 0.500283 | 3:+70298344 | None:intergenic |
| GCTCTTGTTTACTGTACCGC+TGG | 0.502006 | 3:-70298146 | MsG0380015447.01.T01:CDS |
| ATTACTTGACTTGAAAGGAA+TGG | 0.503755 | 3:+70296702 | None:intergenic |
| GACCAGAGCTTTGTTCTACA+TGG | 0.503977 | 3:-70297463 | MsG0380015447.01.T01:CDS |
| CATCAAAGATCATAAACCGT+TGG | 0.504031 | 3:+70296670 | None:intergenic |
| TGCTATCTGTGGTGCTGGTG+TGG | 0.507082 | 3:-70297424 | MsG0380015447.01.T01:CDS |
| GGCGCTACGCTTGGCATCAG+TGG | 0.507135 | 3:+70297263 | None:intergenic |
| TTGTTAGGTGGTGAGTGCGT+TGG | 0.508013 | 3:-70296536 | MsG0380015447.01.T01:three_prime_UTR |
| GACCATGAAGTGAGCTCAGA+AGG | 0.508065 | 3:+70298320 | None:intergenic |
| CCATCACCTTTAGTGTAACC+AGG | 0.509306 | 3:+70297339 | None:intergenic |
| TTGGTATTCAAGGAATTGCT+TGG | 0.510082 | 3:-70298190 | MsG0380015447.01.T01:CDS |
| GGACTTGGTGCTGAGATTGT+TGG | 0.510762 | 3:-70297318 | MsG0380015447.01.T01:CDS |
| CATTCGGTTTGTTCTTGGCA+AGG | 0.513044 | 3:-70297497 | MsG0380015447.01.T01:CDS |
| ATAAACCCAGCAGTGACATT+CGG | 0.513323 | 3:-70297513 | MsG0380015447.01.T01:CDS |
| GGCATCAGTGGCGGAGAAGA+CGG | 0.517403 | 3:+70297275 | None:intergenic |
| GACACAGGATTTGAGAAGGA+TGG | 0.518926 | 3:+70296372 | None:intergenic |
| GAAAGTGGGACATGGGTGGT+GGG | 0.531277 | 3:+70298608 | None:intergenic |
| ATATTCCAACTTAAAAGTAA+TGG | 0.536522 | 3:+70296497 | None:intergenic |
| CATGGTCTTTCTACAGAGCT+GGG | 0.538255 | 3:-70298304 | MsG0380015447.01.T01:CDS |
| CAAGTGATATATGATATATA+TGG | 0.541596 | 3:-70296288 | MsG0380015447.01.T01:three_prime_UTR |
| TTCCCAGAGAGACAACCAAT+TGG | 0.543575 | 3:-70298410 | MsG0380015447.01.T01:CDS |
| GCAAAACCAAGCCAACTTTG+TGG | 0.545823 | 3:-70296648 | MsG0380015447.01.T01:three_prime_UTR |
| GCAGCACCAAGACTCCTAGC+AGG | 0.553150 | 3:+70296938 | None:intergenic |
| GATGTACAAGAACAGAAAAG+TGG | 0.556171 | 3:+70298265 | None:intergenic |
| GGCTCAAACAATGGTGCTGG+AGG | 0.556839 | 3:+70298341 | None:intergenic |
| ATACATCACCACACATGGGT+AGG | 0.557334 | 3:+70296463 | None:intergenic |
| CATATATATCATATATCACT+TGG | 0.557400 | 3:+70296289 | None:intergenic |
| AAGTAATTAATTTAATCCAA+CGG | 0.563313 | 3:-70296686 | MsG0380015447.01.T01:exon |
| ATATGAATATTGAGTGGTTG+AGG | 0.563353 | 3:+70298514 | None:intergenic |
| CACCATGTAGAACAAAGCTC+TGG | 0.569283 | 3:+70297461 | None:intergenic |
| CAAACCCTTGGTGCTATCTG+TGG | 0.570105 | 3:-70297435 | MsG0380015447.01.T01:CDS |
| TTGGCCACTATCCCAATCAC+TGG | 0.571888 | 3:-70296974 | MsG0380015447.01.T01:CDS |
| ACCAGACACAGGATTTGAGA+AGG | 0.579660 | 3:+70296368 | None:intergenic |
| CCTGGTTACACTAAAGGTGA+TGG | 0.579850 | 3:-70297339 | MsG0380015447.01.T01:CDS |
| ACAGCGAACCCAATTGGCAG+TGG | 0.580895 | 3:+70297010 | None:intergenic |
| ACAAAGAGAGTGAGCTATGG+AGG | 0.581560 | 3:-70298468 | MsG0380015447.01.T01:exon |
| GCAGCTCAGAGCCATGATGA+TGG | 0.583683 | 3:-70298383 | MsG0380015447.01.T01:CDS |
| AGTGGTTGAGGTTTGTGATG+AGG | 0.585367 | 3:+70298526 | None:intergenic |
| GAGTCTAAGTGTAAAACTGT+TGG | 0.586868 | 3:-70298209 | MsG0380015447.01.T01:CDS |
| TCAGAGCCATGATGATGGAA+AGG | 0.586889 | 3:-70298378 | MsG0380015447.01.T01:CDS |
| TACATCACCACACATGGGTA+GGG | 0.587144 | 3:+70296464 | None:intergenic |
| GAACTGGTATCAACCCTGCT+AGG | 0.594160 | 3:-70296952 | MsG0380015447.01.T01:CDS |
| GCAAGTGCTGCACCAATGAA+TGG | 0.597918 | 3:+70296754 | None:intergenic |
| TCAACAAAGAGAGTGAGCTA+TGG | 0.609619 | 3:-70298471 | MsG0380015447.01.T01:exon |
| GCTACGCTTGGCATCAGTGG+CGG | 0.612401 | 3:+70297266 | None:intergenic |
| TACATGGTGATGCAAACCCT+TGG | 0.617795 | 3:-70297447 | MsG0380015447.01.T01:CDS |
| ACAAACCGAATGTCACTGCT+GGG | 0.620561 | 3:+70297508 | None:intergenic |
| TAATGATTATTATTGTTAGG+TGG | 0.621814 | 3:-70296548 | MsG0380015447.01.T01:three_prime_UTR |
| TGATGATGGAAAGGACTACA+AGG | 0.623530 | 3:-70298369 | MsG0380015447.01.T01:CDS |
| CATCACCTTTAGTGTAACCA+GGG | 0.631898 | 3:+70297340 | None:intergenic |
| AGCACCACAGATAGCACCAA+GGG | 0.640603 | 3:+70297431 | None:intergenic |
| TACACTAAAGGTGATGGACT+TGG | 0.640675 | 3:-70297333 | MsG0380015447.01.T01:CDS |
| CAGCACCAAGACTCCTAGCA+GGG | 0.643712 | 3:+70296939 | None:intergenic |
| TTAACAGTTAGACCAGACAC+AGG | 0.646554 | 3:+70296357 | None:intergenic |
| GACGGTGTAGACAAGAACAA+AGG | 0.671387 | 3:+70297293 | None:intergenic |
| AACAATACATCACCACACAT+GGG | 0.672623 | 3:+70296459 | None:intergenic |
| GTTAGGGACATACAGGAACG+TGG | 0.684093 | 3:+70297232 | None:intergenic |
| TGCTGAATATGAATATTGAG+TGG | 0.688847 | 3:+70298508 | None:intergenic |
| AAAAGAAAGTGGGACATGGG+TGG | 0.692150 | 3:+70298604 | None:intergenic |
| TTAGGGACATACAGGAACGT+GGG | 0.697760 | 3:+70297233 | None:intergenic |
| TCACAAACCCTACCCATGTG+TGG | 0.706621 | 3:-70296471 | MsG0380015447.01.T01:three_prime_UTR |
| ATGTACAAATGTGCCAGCTG+TGG | 0.708746 | 3:+70296263 | None:intergenic |
| ATCACCTTTAGTGTAACCAG+GGG | 0.709414 | 3:+70297341 | None:intergenic |
| CAGCACCACAGATAGCACCA+AGG | 0.733918 | 3:+70297430 | None:intergenic |
| TGGCTCTGATCACAACTGTG+TGG | 0.744394 | 3:+70296722 | None:intergenic |
| ATACATACCAGAGATACCAG+CGG | 0.782739 | 3:+70298130 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAATATTATAGAATT+TGG | + | Chr3:70296278-70296297 | None:intergenic | 10.0% |
| !! | AATATATTTCAATTTCAATT+AGG | + | Chr3:70297836-70297855 | None:intergenic | 10.0% |
| !! | ATATATTTCAATTTCAATTA+GGG | + | Chr3:70297835-70297854 | None:intergenic | 10.0% |
| !!! | AATTTTGTTATTAAATTTCA+TGG | + | Chr3:70296854-70296873 | None:intergenic | 10.0% |
| !! | AAAAATAACAAATTAGTACT+AGG | + | Chr3:70296950-70296969 | None:intergenic | 15.0% |
| !! | AAGTAATTAATTTAATCCAA+CGG | - | Chr3:70298244-70298263 | MsG0380015447.01.T01:CDS | 15.0% |
| !! | TGTTATAGTACTAATTATTT+CGG | - | Chr3:70296895-70296914 | MsG0380015447.01.T01:intron | 15.0% |
| !!! | TCAATTTTTTACACATTAAA+TGG | - | Chr3:70296291-70296310 | MsG0380015447.01.T01:three_prime_UTR | 15.0% |
| !! | AGAGTGAGTTATTATTATTA+AGG | + | Chr3:70296356-70296375 | None:intergenic | 20.0% |
| !! | ATATTCCAACTTAAAAGTAA+TGG | + | Chr3:70298436-70298455 | None:intergenic | 20.0% |
| !! | ATTAAATTTCATGGTTACTA+GGG | + | Chr3:70296845-70296864 | None:intergenic | 20.0% |
| !! | CAAGTGATATATGATATATA+TGG | - | Chr3:70298642-70298661 | MsG0380015447.01.T01:five_prime_UTR | 20.0% |
| !! | CATATATATCATATATCACT+TGG | + | Chr3:70298644-70298663 | None:intergenic | 20.0% |
| !! | GAAATAATTAAAACCAGATA+AGG | + | Chr3:70298325-70298344 | None:intergenic | 20.0% |
| !! | GTAACAGTAATGATTTATTA+TGG | - | Chr3:70297359-70297378 | MsG0380015447.01.T01:CDS | 20.0% |
| !! | GTGTAATGATTATTATTGTT+AGG | - | Chr3:70298379-70298398 | MsG0380015447.01.T01:CDS | 20.0% |
| !! | TAATGATTATTATTGTTAGG+TGG | - | Chr3:70298382-70298401 | MsG0380015447.01.T01:CDS | 20.0% |
| !! | TATTAAATTTCATGGTTACT+AGG | + | Chr3:70296846-70296865 | None:intergenic | 20.0% |
| !!! | AAACTAAGAATTGTTTTGTT+TGG | - | Chr3:70297095-70297114 | MsG0380015447.01.T01:intron | 20.0% |
| !!! | AACAAAACAATTCTTAGTTT+TGG | + | Chr3:70297095-70297114 | None:intergenic | 20.0% |
| !!! | AATTAATTACTTGACTTGAA+AGG | + | Chr3:70298236-70298255 | None:intergenic | 20.0% |
| !!! | ATTACTTTTAAGTTGGAATA+TGG | - | Chr3:70298435-70298454 | MsG0380015447.01.T01:CDS | 20.0% |
| !!! | GTAACTTTGTTTTTTTTCTT+TGG | - | Chr3:70296917-70296936 | MsG0380015447.01.T01:CDS | 20.0% |
| !!! | TATTTTATTTGATCCTTATC+TGG | - | Chr3:70298309-70298328 | MsG0380015447.01.T01:CDS | 20.0% |
| !!! | TTTTCTGCATTATTAGATTT+TGG | - | Chr3:70297895-70297914 | MsG0380015447.01.T01:intron | 20.0% |
| ! | AAAGAACAAGATGTTTCATT+GGG | - | Chr3:70296487-70296506 | MsG0380015447.01.T01:three_prime_UTR | 25.0% |
| ! | AACATCCTTTACATACAAAA+AGG | + | Chr3:70298348-70298367 | None:intergenic | 25.0% |
| ! | AATTCCTTCATCATGTATTA+TGG | + | Chr3:70297186-70297205 | None:intergenic | 25.0% |
| ! | ACATCCTTTACATACAAAAA+GGG | + | Chr3:70298347-70298366 | None:intergenic | 25.0% |
| ! | ACCTCATAAAAAATACATGA+AGG | - | Chr3:70297306-70297325 | MsG0380015447.01.T01:CDS | 25.0% |
| ! | ACTGCACATAAAAAATGATA+AGG | + | Chr3:70298139-70298158 | None:intergenic | 25.0% |
| ! | ATTAAGGACAAAAAAGAAAG+TGG | + | Chr3:70296340-70296359 | None:intergenic | 25.0% |
| ! | ATTACCATAATACATGATGA+AGG | - | Chr3:70297179-70297198 | MsG0380015447.01.T01:intron | 25.0% |
| ! | ATTATCTTCAACAAAGATCT+TGG | - | Chr3:70298016-70298035 | MsG0380015447.01.T01:intron | 25.0% |
| ! | GGTACTAATATGTAATGTTA+TGG | - | Chr3:70297380-70297399 | MsG0380015447.01.T01:CDS | 25.0% |
| ! | TAAAATAAAACCCACAAAGT+TGG | + | Chr3:70298296-70298315 | None:intergenic | 25.0% |
| ! | TAAAGAACAAGATGTTTCAT+TGG | - | Chr3:70296486-70296505 | MsG0380015447.01.T01:three_prime_UTR | 25.0% |
| ! | TTAAGGACAAAAAAGAAAGT+GGG | + | Chr3:70296339-70296358 | None:intergenic | 25.0% |
| !! | ATTTCCCTTTTTGTATGTAA+AGG | - | Chr3:70298340-70298359 | MsG0380015447.01.T01:CDS | 25.0% |
| !!! | GTTTTCCATTACTTTTAAGT+TGG | - | Chr3:70298428-70298447 | MsG0380015447.01.T01:CDS | 25.0% |
| !!! | TCCTTCATGTATTTTTTATG+AGG | + | Chr3:70297310-70297329 | None:intergenic | 25.0% |
| !!! | TTATCATTTTTTATGTGCAG+TGG | - | Chr3:70298138-70298157 | MsG0380015447.01.T01:CDS | 25.0% |
| !!! | TTCATGTATTTTTTATGAGG+TGG | + | Chr3:70297307-70297326 | None:intergenic | 25.0% |
| AACTGTTAACTCTTGTGTAT+TGG | - | Chr3:70298587-70298606 | MsG0380015447.01.T01:five_prime_UTR | 30.0% | |
| ACTGTTAACTCTTGTGTATT+GGG | - | Chr3:70298588-70298607 | MsG0380015447.01.T01:five_prime_UTR | 30.0% | |
| ACTTTCTACACCAACAAAAA+TGG | - | Chr3:70297549-70297568 | MsG0380015447.01.T01:intron | 30.0% | |
| ATATGAATATTGAGTGGTTG+AGG | + | Chr3:70296419-70296438 | None:intergenic | 30.0% | |
| ATATGTAATGTTATGGATGC+AGG | - | Chr3:70297387-70297406 | MsG0380015447.01.T01:CDS | 30.0% | |
| ATCACTATCTTGACTGTTAT+GGG | - | Chr3:70296685-70296704 | MsG0380015447.01.T01:exon | 30.0% | |
| TATGTAATGTTATGGATGCA+GGG | - | Chr3:70297388-70297407 | MsG0380015447.01.T01:CDS | 30.0% | |
| TGCTGAATATGAATATTGAG+TGG | + | Chr3:70296425-70296444 | None:intergenic | 30.0% | |
| TGTAAAACTGTTGGTATTCA+AGG | - | Chr3:70296730-70296749 | MsG0380015447.01.T01:CDS | 30.0% | |
| ! | ATTACTTGACTTGAAAGGAA+TGG | + | Chr3:70298231-70298250 | None:intergenic | 30.0% |
| AAAAATACAGCGAACCCAAT+TGG | + | Chr3:70297929-70297948 | None:intergenic | 35.0% | |
| AACAATACATCACCACACAT+GGG | + | Chr3:70298474-70298493 | None:intergenic | 35.0% | |
| ACAAAAAAGAAAGTGGGACA+TGG | + | Chr3:70296333-70296352 | None:intergenic | 35.0% | |
| ATGTAATGTTATGGATGCAG+GGG | - | Chr3:70297389-70297408 | MsG0380015447.01.T01:CDS | 35.0% | |
| ATTCCACTAAGAATCCAACT+CGG | - | Chr3:70297064-70297083 | MsG0380015447.01.T01:intron | 35.0% | |
| CAAAAAAGAAAGTGGGACAT+GGG | + | Chr3:70296332-70296351 | None:intergenic | 35.0% | |
| CATCAAAGATCATAAACCGT+TGG | + | Chr3:70298263-70298282 | None:intergenic | 35.0% | |
| CATCACTATCTTGACTGTTA+TGG | - | Chr3:70296684-70296703 | MsG0380015447.01.T01:exon | 35.0% | |
| GAGTCTAAGTGTAAAACTGT+TGG | - | Chr3:70296721-70296740 | MsG0380015447.01.T01:CDS | 35.0% | |
| GATGTACAAGAACAGAAAAG+TGG | + | Chr3:70296668-70296687 | None:intergenic | 35.0% | |
| TCTTCAACAAAGATCTTGGT+TGG | - | Chr3:70298020-70298039 | MsG0380015447.01.T01:intron | 35.0% | |
| TTCTACACCAACAAAAATGG+TGG | - | Chr3:70297552-70297571 | MsG0380015447.01.T01:intron | 35.0% | |
| TTGGTATTCAAGGAATTGCT+TGG | - | Chr3:70296740-70296759 | MsG0380015447.01.T01:CDS | 35.0% | |
| TTTAGCAACTAGACAAACCT+AGG | + | Chr3:70297214-70297233 | None:intergenic | 35.0% | |
| TTTGTCTAGTTGCTAAAACC+CGG | - | Chr3:70297217-70297236 | MsG0380015447.01.T01:intron | 35.0% | |
| ! | AATTGGGTTCGCTGTATTTT+TGG | - | Chr3:70297928-70297947 | MsG0380015447.01.T01:intron | 35.0% |
| ! | GATGAAGGAATTGATAACCT+AGG | - | Chr3:70297194-70297213 | MsG0380015447.01.T01:intron | 35.0% |
| !! | TTAGGGCATGTTTGTTATCA+TGG | + | Chr3:70297818-70297837 | None:intergenic | 35.0% |
| !! | TTATGTGCAGTGGATTTTCT+GGG | - | Chr3:70298148-70298167 | MsG0380015447.01.T01:CDS | 35.0% |
| !! | TTTATGTGCAGTGGATTTTC+TGG | - | Chr3:70298147-70298166 | MsG0380015447.01.T01:CDS | 35.0% |
| !!! | CTTTTGCCATTTTTCTCTGT+TGG | - | Chr3:70298534-70298553 | MsG0380015447.01.T01:five_prime_UTR | 35.0% |
| AAACACGCACTCAACAGTTA+GGG | + | Chr3:70297717-70297736 | None:intergenic | 40.0% | |
| AACTCTTGTGTATTGGGCAT+TGG | - | Chr3:70298594-70298613 | MsG0380015447.01.T01:five_prime_UTR | 40.0% | |
| AGCCACCTTGTAAAATCATG+TGG | - | Chr3:70297769-70297788 | MsG0380015447.01.T01:intron | 40.0% | |
| ATAAACCCAGCAGTGACATT+CGG | - | Chr3:70297417-70297436 | MsG0380015447.01.T01:CDS | 40.0% | |
| ATACATACCAGAGATACCAG+CGG | + | Chr3:70296803-70296822 | None:intergenic | 40.0% | |
| ATACCAATTGGTTGTCTCTC+TGG | + | Chr3:70296526-70296545 | None:intergenic | 40.0% | |
| ATCACCTTTAGTGTAACCAG+GGG | + | Chr3:70297592-70297611 | None:intergenic | 40.0% | |
| CAAAACCAAGCCAACTTTGT+GGG | - | Chr3:70298283-70298302 | MsG0380015447.01.T01:CDS | 40.0% | |
| CAACAATACATCACCACACA+TGG | + | Chr3:70298475-70298494 | None:intergenic | 40.0% | |
| CATCACCTTTAGTGTAACCA+GGG | + | Chr3:70297593-70297612 | None:intergenic | 40.0% | |
| CTTGGCACATACTTATCCTA+TGG | + | Chr3:70298626-70298645 | None:intergenic | 40.0% | |
| GAGTTGAACTCAAACCCTTA+CGG | + | Chr3:70297251-70297270 | None:intergenic | 40.0% | |
| GATGGACCAACAGAGAAAAA+TGG | + | Chr3:70298543-70298562 | None:intergenic | 40.0% | |
| TAAAACCCACAAAGTTGGCT+TGG | + | Chr3:70298291-70298310 | None:intergenic | 40.0% | |
| TAAACACGCACTCAACAGTT+AGG | + | Chr3:70297718-70297737 | None:intergenic | 40.0% | |
| TACCAATTGGTTGTCTCTCT+GGG | + | Chr3:70296525-70296544 | None:intergenic | 40.0% | |
| TCAACAAAGAGAGTGAGCTA+TGG | - | Chr3:70296459-70296478 | MsG0380015447.01.T01:three_prime_UTR | 40.0% | |
| TGATACCAGTTCCAGTGATT+GGG | + | Chr3:70297970-70297989 | None:intergenic | 40.0% | |
| TGTAATGTTATGGATGCAGG+GGG | - | Chr3:70297390-70297409 | MsG0380015447.01.T01:CDS | 40.0% | |
| TGTAGTCCTTTCCATCATCA+TGG | + | Chr3:70296561-70296580 | None:intergenic | 40.0% | |
| TTAACAGTTAGACCAGACAC+AGG | + | Chr3:70298576-70298595 | None:intergenic | 40.0% | |
| TTGATACCAGTTCCAGTGAT+TGG | + | Chr3:70297971-70297990 | None:intergenic | 40.0% | |
| ! | AATCCGAGTTGGATTCTTAG+TGG | + | Chr3:70297070-70297089 | None:intergenic | 40.0% |
| ! | AGCCACATGATTTTACAAGG+TGG | + | Chr3:70297774-70297793 | None:intergenic | 40.0% |
| ! | AGTGACATTCGGTTTGTTCT+TGG | - | Chr3:70297428-70297447 | MsG0380015447.01.T01:CDS | 40.0% |
| ! | GTGAGCCACATGATTTTACA+AGG | + | Chr3:70297777-70297796 | None:intergenic | 40.0% |
| !! | CAAGGAATTGCTTGGTCTTT+TGG | - | Chr3:70296748-70296767 | MsG0380015447.01.T01:CDS | 40.0% |
| !! | GTTAGCACCACCATTTTTGT+TGG | + | Chr3:70297562-70297581 | None:intergenic | 40.0% |
| !! | TACACTAAAGGTGATGGACT+TGG | - | Chr3:70297597-70297616 | MsG0380015447.01.T01:intron | 40.0% |
| !! | TGATGATGGAAAGGACTACA+AGG | - | Chr3:70296561-70296580 | MsG0380015447.01.T01:three_prime_UTR | 40.0% |
| !!! | TAGTTTTGGAGAATCCGAGT+TGG | + | Chr3:70297081-70297100 | None:intergenic | 40.0% |
| AAAAGAAAGTGGGACATGGG+TGG | + | Chr3:70296329-70296348 | None:intergenic | 45.0% | |
| AACAAACCGAATGTCACTGC+TGG | + | Chr3:70297426-70297445 | None:intergenic | 45.0% | |
| ACAAACCGAATGTCACTGCT+GGG | + | Chr3:70297425-70297444 | None:intergenic | 45.0% | |
| ACAAAGAGAGTGAGCTATGG+AGG | - | Chr3:70296462-70296481 | MsG0380015447.01.T01:three_prime_UTR | 45.0% | |
| ACCAGACACAGGATTTGAGA+AGG | + | Chr3:70298565-70298584 | None:intergenic | 45.0% | |
| ACTATCCCAATCACTGGAAC+TGG | - | Chr3:70297962-70297981 | MsG0380015447.01.T01:intron | 45.0% | |
| AGCTCAGAAGGCTCAAACAA+TGG | + | Chr3:70296601-70296620 | None:intergenic | 45.0% | |
| AGTGGTTGAGGTTTGTGATG+AGG | + | Chr3:70296407-70296426 | None:intergenic | 45.0% | |
| AGTTCCAGTGATTGGGATAG+TGG | + | Chr3:70297963-70297982 | None:intergenic | 45.0% | |
| ATACATCACCACACATGGGT+AGG | + | Chr3:70298470-70298489 | None:intergenic | 45.0% | |
| CACCATGTAGAACAAAGCTC+TGG | + | Chr3:70297472-70297491 | None:intergenic | 45.0% | |
| CATGGTCTTTCTACAGAGCT+GGG | - | Chr3:70296626-70296645 | MsG0380015447.01.T01:three_prime_UTR | 45.0% | |
| CCATCACCTTTAGTGTAACC+AGG | + | Chr3:70297594-70297613 | None:intergenic | 45.0% | |
| CCTGGTTACACTAAAGGTGA+TGG | - | Chr3:70297591-70297610 | MsG0380015447.01.T01:intron | 45.0% | |
| CTCAACAGTTAGGGACATAC+AGG | + | Chr3:70297708-70297727 | None:intergenic | 45.0% | |
| CTCTGAGCTGCAATACCAAT+TGG | + | Chr3:70296538-70296557 | None:intergenic | 45.0% | |
| GACACAGGATTTGAGAAGGA+TGG | + | Chr3:70298561-70298580 | None:intergenic | 45.0% | |
| GACGGTGTAGACAAGAACAA+AGG | + | Chr3:70297640-70297659 | None:intergenic | 45.0% | |
| GCAAAACCAAGCCAACTTTG+TGG | - | Chr3:70298282-70298301 | MsG0380015447.01.T01:CDS | 45.0% | |
| TACATCACCACACATGGGTA+GGG | + | Chr3:70298469-70298488 | None:intergenic | 45.0% | |
| TCATGGTCTTTCTACAGAGC+TGG | - | Chr3:70296625-70296644 | MsG0380015447.01.T01:three_prime_UTR | 45.0% | |
| TCCTTCTCAAATCCTGTGTC+TGG | - | Chr3:70298561-70298580 | MsG0380015447.01.T01:five_prime_UTR | 45.0% | |
| TTAGGGACATACAGGAACGT+GGG | + | Chr3:70297700-70297719 | None:intergenic | 45.0% | |
| TTCCCAGAGAGACAACCAAT+TGG | - | Chr3:70296520-70296539 | MsG0380015447.01.T01:three_prime_UTR | 45.0% | |
| ! | CATTCGGTTTGTTCTTGGCA+AGG | - | Chr3:70297433-70297452 | MsG0380015447.01.T01:CDS | 45.0% |
| ! | TACATGGTGATGCAAACCCT+TGG | - | Chr3:70297483-70297502 | MsG0380015447.01.T01:CDS | 45.0% |
| ! | TGGTGTGGTTAAGGGTTTTG+AGG | - | Chr3:70297521-70297540 | MsG0380015447.01.T01:CDS | 45.0% |
| ! | TTCTGGGTTGGACCATTCAT+TGG | - | Chr3:70298164-70298183 | MsG0380015447.01.T01:CDS | 45.0% |
| !! | GACCAGAGCTTTGTTCTACA+TGG | - | Chr3:70297467-70297486 | MsG0380015447.01.T01:CDS | 45.0% |
| !! | GATATATATGGTGCCACAGC+TGG | - | Chr3:70298654-70298673 | MsG0380015447.01.T01:five_prime_UTR | 45.0% |
| !! | GGAATTGCTTGGTCTTTTGG+TGG | - | Chr3:70296751-70296770 | MsG0380015447.01.T01:CDS | 45.0% |
| !! | GGTGTGGTTAAGGGTTTTGA+GGG | - | Chr3:70297522-70297541 | MsG0380015447.01.T01:CDS | 45.0% |
| !! | TCAGAGCCATGATGATGGAA+AGG | - | Chr3:70296552-70296571 | MsG0380015447.01.T01:three_prime_UTR | 45.0% |
| !!! | ATTTTGGCTCCACTGCCAAT+TGG | - | Chr3:70297911-70297930 | MsG0380015447.01.T01:intron | 45.0% |
| !!! | CGCTGTATTTTTGGTGCACT+TGG | - | Chr3:70297937-70297956 | MsG0380015447.01.T01:intron | 45.0% |
| !!! | TTTTGGCTCCACTGCCAATT+GGG | - | Chr3:70297912-70297931 | MsG0380015447.01.T01:intron | 45.0% |
| !! | TGATAAAAAAAAAAAAAAAA+AGG | - | Chr3:70296982-70297001 | MsG0380015447.01.T01:CDS | 5.0% |
| !!! | TTAATTATAATACTTTTATT+TGG | - | Chr3:70297337-70297356 | MsG0380015447.01.T01:CDS | 5.0% |
| AACCCTTACGGAGTATGAGC+CGG | + | Chr3:70297239-70297258 | None:intergenic | 50.0% | |
| AGCACCACAGATAGCACCAA+GGG | + | Chr3:70297502-70297521 | None:intergenic | 50.0% | |
| AGCCTTCTGAGCTCACTTCA+TGG | - | Chr3:70296608-70296627 | MsG0380015447.01.T01:three_prime_UTR | 50.0% | |
| ATCAACCCTGCTAGGAGTCT+TGG | - | Chr3:70297986-70298005 | MsG0380015447.01.T01:intron | 50.0% | |
| GAACTGGTATCAACCCTGCT+AGG | - | Chr3:70297978-70297997 | MsG0380015447.01.T01:intron | 50.0% | |
| GAAGGCTCAAACAATGGTGC+TGG | + | Chr3:70296595-70296614 | None:intergenic | 50.0% | |
| GACCATGAAGTGAGCTCAGA+AGG | + | Chr3:70296613-70296632 | None:intergenic | 50.0% | |
| GTTAGGGACATACAGGAACG+TGG | + | Chr3:70297701-70297720 | None:intergenic | 50.0% | |
| GTTGCCCCTGGTTACACTAA+AGG | - | Chr3:70297585-70297604 | MsG0380015447.01.T01:intron | 50.0% | |
| TACTGTACCGCTGGTATCTC+TGG | - | Chr3:70296793-70296812 | MsG0380015447.01.T01:intron | 50.0% | |
| TCACAAACCCTACCCATGTG+TGG | - | Chr3:70298459-70298478 | MsG0380015447.01.T01:exon | 50.0% | |
| TGTTAGGTGGTGAGTGCGTT+GGG | - | Chr3:70298395-70298414 | MsG0380015447.01.T01:CDS | 50.0% | |
| TTGGCCACTATCCCAATCAC+TGG | - | Chr3:70297956-70297975 | MsG0380015447.01.T01:intron | 50.0% | |
| TTGTTAGGTGGTGAGTGCGT+TGG | - | Chr3:70298394-70298413 | MsG0380015447.01.T01:CDS | 50.0% | |
| ! | GCAAGTGCTGCACCAATGAA+TGG | + | Chr3:70298179-70298198 | None:intergenic | 50.0% |
| ! | GCTCTTGTTTACTGTACCGC+TGG | - | Chr3:70296784-70296803 | MsG0380015447.01.T01:intron | 50.0% |
| ! | TCAAACAATGGTGCTGGAGG+TGG | + | Chr3:70296589-70296608 | None:intergenic | 50.0% |
| !! | CAAACCCTTGGTGCTATCTG+TGG | - | Chr3:70297495-70297514 | MsG0380015447.01.T01:CDS | 50.0% |
| !! | GGACTTGGTGCTGAGATTGT+TGG | - | Chr3:70297612-70297631 | MsG0380015447.01.T01:intron | 50.0% |
| !! | GTGCAGTGGATTTTCTGGGT+TGG | - | Chr3:70298152-70298171 | MsG0380015447.01.T01:CDS | 50.0% |
| !! | TGGCTCTGATCACAACTGTG+TGG | + | Chr3:70298211-70298230 | None:intergenic | 50.0% |
| !! | TGGGCATTGGCTTCTTCCAT+AGG | - | Chr3:70298607-70298626 | MsG0380015447.01.T01:five_prime_UTR | 50.0% |
| !! | TGTGGTGCTGGTGTGGTTAA+GGG | - | Chr3:70297513-70297532 | MsG0380015447.01.T01:CDS | 50.0% |
| AACCCGGCTCATACTCCGTA+AGG | - | Chr3:70297233-70297252 | MsG0380015447.01.T01:intron | 55.0% | |
| ACAGCGAACCCAATTGGCAG+TGG | + | Chr3:70297923-70297942 | None:intergenic | 55.0% | |
| ACCCGGCTCATACTCCGTAA+GGG | - | Chr3:70297234-70297253 | MsG0380015447.01.T01:intron | 55.0% | |
| ACCCTTACGGAGTATGAGCC+GGG | + | Chr3:70297238-70297257 | None:intergenic | 55.0% | |
| AGAAAGTGGGACATGGGTGG+TGG | + | Chr3:70296326-70296345 | None:intergenic | 55.0% | |
| CAGCACCAAGACTCCTAGCA+GGG | + | Chr3:70297994-70298013 | None:intergenic | 55.0% | |
| CAGCACCACAGATAGCACCA+AGG | + | Chr3:70297503-70297522 | None:intergenic | 55.0% | |
| GAAAGTGGGACATGGGTGGT+GGG | + | Chr3:70296325-70296344 | None:intergenic | 55.0% | |
| GCAGCTCAGAGCCATGATGA+TGG | - | Chr3:70296547-70296566 | MsG0380015447.01.T01:three_prime_UTR | 55.0% | |
| GGTGCTAACTTTGTTGCCCC+TGG | - | Chr3:70297573-70297592 | MsG0380015447.01.T01:intron | 55.0% | |
| TACAGGAACGTGGGAGTCTC+TGG | + | Chr3:70297691-70297710 | None:intergenic | 55.0% | |
| TGGTGAGTGCGTTGGGTGAT+GGG | - | Chr3:70298402-70298421 | MsG0380015447.01.T01:CDS | 55.0% | |
| ! | GGCTCAAACAATGGTGCTGG+AGG | + | Chr3:70296592-70296611 | None:intergenic | 55.0% |
| !! | CTGTGGTGCTGGTGTGGTTA+AGG | - | Chr3:70297512-70297531 | MsG0380015447.01.T01:CDS | 55.0% |
| !! | CTTGGTGCTATCTGTGGTGC+TGG | - | Chr3:70297501-70297520 | MsG0380015447.01.T01:CDS | 55.0% |
| !! | TGCTATCTGTGGTGCTGGTG+TGG | - | Chr3:70297506-70297525 | MsG0380015447.01.T01:CDS | 55.0% |
| GCAGCACCAAGACTCCTAGC+AGG | + | Chr3:70297995-70298014 | None:intergenic | 60.0% | |
| GCTACGCTTGGCATCAGTGG+CGG | + | Chr3:70297667-70297686 | None:intergenic | 60.0% | |
| GTGGTGAGTGCGTTGGGTGA+TGG | - | Chr3:70298401-70298420 | MsG0380015447.01.T01:CDS | 60.0% | |
| ! | GGCATCAGTGGCGGAGAAGA+CGG | + | Chr3:70297658-70297677 | None:intergenic | 60.0% |
| GGAGTCTCTGGCGCTACGCT+TGG | + | Chr3:70297679-70297698 | None:intergenic | 65.0% | |
| GGCGCTACGCTTGGCATCAG+TGG | + | Chr3:70297670-70297689 | None:intergenic | 65.0% | |
| !! | AGTGGGACATGGGTGGTGGG+TGG | + | Chr3:70296322-70296341 | None:intergenic | 65.0% |
| !! | GGACATGGGTGGTGGGTGGT+GGG | + | Chr3:70296318-70296337 | None:intergenic | 65.0% |
| !! | GGGACATGGGTGGTGGGTGG+TGG | + | Chr3:70296319-70296338 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 70296270 | 70298682 | 70296270 | ID=MsG0380015447.01;Name=MsG0380015447.01 |
| Chr3 | mRNA | 70296270 | 70298682 | 70296270 | ID=MsG0380015447.01.T01;Parent=MsG0380015447.01;Name=MsG0380015447.01.T01;_AED=0.47;_eAED=0.47;_QI=208|1|1|1|1|1|4|429|290 |
| Chr3 | exon | 70296270 | 70296794 | 70296270 | ID=MsG0380015447.01.T01:exon:401;Parent=MsG0380015447.01.T01 |
| Chr3 | exon | 70296901 | 70297041 | 70296901 | ID=MsG0380015447.01.T01:exon:400;Parent=MsG0380015447.01.T01 |
| Chr3 | exon | 70297245 | 70297543 | 70297245 | ID=MsG0380015447.01.T01:exon:399;Parent=MsG0380015447.01.T01 |
| Chr3 | exon | 70298138 | 70298682 | 70298138 | ID=MsG0380015447.01.T01:exon:398;Parent=MsG0380015447.01.T01 |
| Chr3 | five_prime_UTR | 70298475 | 70298682 | 70298475 | ID=MsG0380015447.01.T01:five_prime_utr;Parent=MsG0380015447.01.T01 |
| Chr3 | CDS | 70298138 | 70298474 | 70298138 | ID=MsG0380015447.01.T01:cds;Parent=MsG0380015447.01.T01 |
| Chr3 | CDS | 70297245 | 70297543 | 70297245 | ID=MsG0380015447.01.T01:cds;Parent=MsG0380015447.01.T01 |
| Chr3 | CDS | 70296901 | 70297041 | 70296901 | ID=MsG0380015447.01.T01:cds;Parent=MsG0380015447.01.T01 |
| Chr3 | CDS | 70296699 | 70296794 | 70296699 | ID=MsG0380015447.01.T01:cds;Parent=MsG0380015447.01.T01 |
| Chr3 | three_prime_UTR | 70296270 | 70296698 | 70296270 | ID=MsG0380015447.01.T01:three_prime_utr;Parent=MsG0380015447.01.T01 |
| Gene Sequence |
| Protein sequence |
