AlfalfaGEDB | MsG0280008118.01

M. sativa cultivar ZhongmuNo.1 / MsG0280008118.01

KEGG: K02901
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFAM: PF00467 PF01777

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008118.01.T01	XP_003594893.2	100	135	0	0	1	135	1	135	4.88E-91	270

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008118.01.T01	Q05462	89.63	135	14	0	1	135	1	135	2.39E-84	245

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008118.01.T01	G7IG15	100.000	135	0	0	1	135	1	135	2.33e-91	270

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048197.01	MsG0280008118.01	0.840379	9.009479e-58	1.281034e-54
MsG0080048216.01	MsG0280008118.01	0.859195	4.892677e-63	1.281408e-59
MsG0080048383.01	MsG0280008118.01	0.810371	1.191831e-50	7.171302e-48
MsG0080048687.01	MsG0280008118.01	0.920511	1.166703e-87	3.972139e-83
MsG0080048784.01	MsG0280008118.01	0.812409	4.302784e-51	2.733799e-48
MsG0080048968.01	MsG0280008118.01	0.849123	3.957163e-60	7.426639e-57
MsG0080048971.01	MsG0280008118.01	0.915530	5.274024e-85	1.384602e-80
MsG0180000023.01	MsG0280008118.01	0.829747	4.330334e-55	4.472779e-52
MsG0180000139.01	MsG0280008118.01	0.839839	1.246330e-57	1.742484e-54
MsG0180000227.01	MsG0280008118.01	0.803914	2.777441e-49	1.412992e-46
MsG0180000318.01	MsG0280008118.01	-0.830300	3.173180e-55	3.329754e-52
MsG0180000331.01	MsG0280008118.01	0.857854	1.229291e-62	3.076577e-59
MsG0180000339.01	MsG0280008118.01	0.905969	2.446593e-80	4.057526e-76
MsG0180000384.01	MsG0280008118.01	0.800075	1.708682e-48	7.883054e-46
MsG0180000611.01	MsG0280008118.01	0.824269	8.845611e-54	7.796887e-51
MsG0180000614.01	MsG0280008118.01	0.845409	4.135621e-59	6.885569e-56
MsG0180001237.01	MsG0280008118.01	0.812965	3.250408e-51	2.095501e-48
MsG0180001260.01	MsG0280008118.01	0.800344	1.506453e-48	6.997858e-46
MsG0180001599.01	MsG0280008118.01	0.813614	2.341494e-51	1.536448e-48
MsG0180002547.01	MsG0280008118.01	0.813053	3.109905e-51	2.009678e-48
MsG0180003115.01	MsG0280008118.01	0.865400	6.069204e-65	1.971942e-61
MsG0180003117.01	MsG0280008118.01	0.842227	2.941403e-58	4.429937e-55
MsG0180003612.01	MsG0280008118.01	0.862504	4.835977e-64	1.419634e-60
MsG0180003651.01	MsG0280008118.01	0.848831	4.769420e-60	8.865291e-57
MsG0180003693.01	MsG0280008118.01	0.809099	2.237220e-50	1.301726e-47
MsG0180003793.01	MsG0280008118.01	0.944809	9.839374e-104	1.440370e-98
MsG0180003984.01	MsG0280008118.01	0.825082	5.690773e-54	5.135006e-51
MsG0180004009.01	MsG0280008118.01	0.907760	3.575223e-81	6.432917e-77
MsG0180004016.01	MsG0280008118.01	0.837413	5.274489e-57	6.845856e-54
MsG0180004128.01	MsG0280008118.01	0.829344	5.423973e-55	5.536826e-52
MsG0180004129.01	MsG0280008118.01	0.917092	8.083205e-86	2.292622e-81
MsG0180004130.01	MsG0280008118.01	0.946005	1.049579e-104	1.670645e-99
MsG0180004335.01	MsG0280008118.01	-0.809466	1.866319e-50	1.096578e-47
MsG0180004398.01	MsG0280008118.01	0.848082	7.687142e-60	1.394336e-56
MsG0180004481.01	MsG0280008118.01	0.819795	9.628831e-53	7.484355e-50
MsG0180004482.01	MsG0280008118.01	0.817080	3.969742e-52	2.862728e-49
MsG0180004509.01	MsG0280008118.01	0.824591	7.428077e-54	6.609345e-51
MsG0180004767.01	MsG0280008118.01	0.826385	2.793187e-54	2.615656e-51
MsG0180004854.01	MsG0280008118.01	0.890978	6.039726e-74	5.195788e-70
MsG0180004861.01	MsG0280008118.01	0.853027	3.133470e-61	6.677070e-58
MsG0180004991.01	MsG0280008118.01	0.834934	2.248988e-56	2.708850e-53
MsG0180005334.01	MsG0280008118.01	0.808827	2.557392e-50	1.477183e-47
MsG0180005337.01	MsG0280008118.01	0.808383	3.182357e-50	1.817039e-47
MsG0180005366.01	MsG0280008118.01	0.831699	1.439515e-55	1.574405e-52
MsG0180005426.01	MsG0280008118.01	0.888404	6.083441e-73	4.706762e-69
MsG0180005659.01	MsG0280008118.01	0.835132	2.005122e-56	2.429297e-53
MsG0180005746.01	MsG0280008118.01	0.808038	3.768300e-50	2.131989e-47
MsG0180006013.01	MsG0280008118.01	0.813790	2.141004e-51	1.411585e-48
MsG0280006305.01	MsG0280008118.01	0.823746	1.173570e-53	1.019435e-50
MsG0280006406.01	MsG0280008118.01	0.829744	4.338170e-55	4.480397e-52
MsG0280006424.01	MsG0280008118.01	0.828671	7.898791e-55	7.904203e-52
MsG0280006741.01	MsG0280008118.01	0.841629	4.232825e-58	6.256761e-55
MsG0280006819.01	MsG0280008118.01	0.806795	6.917036e-50	3.788841e-47
MsG0280006836.01	MsG0280008118.01	0.818404	1.995011e-52	1.492079e-49
MsG0280006852.01	MsG0280008118.01	0.808754	2.651857e-50	1.528786e-47
MsG0280006993.01	MsG0280008118.01	0.914052	3.013598e-84	7.346266e-80
MsG0280007161.01	MsG0280008118.01	0.828668	7.909079e-55	7.913962e-52
MsG0280007440.01	MsG0280008118.01	0.831966	1.236867e-55	1.363440e-52
MsG0280007441.01	MsG0280008118.01	0.809853	1.540836e-50	9.146794e-48
MsG0280007847.01	MsG0280008118.01	0.874103	8.774016e-68	3.899644e-64
MsG0280008118.01	MsG0280008239.01	0.814629	1.397598e-51	9.426427e-49
MsG0280008118.01	MsG0280008283.01	0.871254	7.858738e-67	3.149070e-63
MsG0280008118.01	MsG0280009111.01	0.833761	4.428695e-56	5.149915e-53
MsG0280008118.01	MsG0280009141.01	0.886664	2.809541e-72	2.025540e-68
MsG0280008118.01	MsG0280009230.01	0.849999	2.253543e-60	4.351292e-57
MsG0280008118.01	MsG0280009356.01	0.826661	2.400710e-54	2.265762e-51
MsG0280008118.01	MsG0280009375.01	0.914868	1.155903e-84	2.937185e-80
MsG0280008118.01	MsG0280009575.01	0.839020	2.033513e-57	2.772401e-54
MsG0280008118.01	MsG0280010002.01	0.825946	3.551052e-54	3.284150e-51
MsG0280008118.01	MsG0280010495.01	0.891973	2.434703e-74	2.181052e-70
MsG0280008118.01	MsG0280010525.01	0.843811	1.113526e-58	1.762672e-55
MsG0280008118.01	MsG0280010776.01	0.878099	3.692147e-69	1.903032e-65
MsG0280008118.01	MsG0280010801.01	0.941716	2.561430e-101	3.057648e-96
MsG0280008118.01	MsG0280011037.01	0.804660	1.941947e-49	1.007021e-46
MsG0280008118.01	MsG0280011234.01	0.805814	1.113064e-49	5.945985e-47
MsG0280008118.01	MsG0280011387.01	0.832814	7.624601e-56	8.617951e-53
MsG0280008118.01	MsG0380011614.01	0.876485	1.345425e-68	6.535457e-65
MsG0280008118.01	MsG0380011747.01	0.821183	4.622292e-53	3.734105e-50
MsG0280008118.01	MsG0380012073.01	0.930590	1.312741e-93	7.867736e-89
MsG0280008118.01	MsG0380012108.01	0.803758	2.991582e-49	1.515794e-46
MsG0280008118.01	MsG0380013579.01	0.815646	8.310773e-52	5.762909e-49
MsG0280008118.01	MsG0380013641.01	0.815394	9.454802e-52	6.510777e-49
MsG0280008118.01	MsG0380014175.01	0.808829	2.555037e-50	1.475901e-47
MsG0280008118.01	MsG0380014330.01	0.807813	4.206954e-50	2.366216e-47
MsG0280008118.01	MsG0380014778.01	0.829386	5.298604e-55	5.415134e-52
MsG0280008118.01	MsG0380015027.01	0.840874	6.686575e-58	9.654156e-55
MsG0280008118.01	MsG0380015118.01	0.816201	6.248649e-52	4.399241e-49
MsG0280008118.01	MsG0380015435.01	0.809075	2.263076e-50	1.315934e-47
MsG0280008118.01	MsG0380015598.01	-0.851870	6.693404e-61	1.373416e-57
MsG0280008118.01	MsG0380015818.01	0.838261	3.193467e-57	4.253899e-54
MsG0280008118.01	MsG0380015831.01	0.807762	4.314627e-50	2.423477e-47
MsG0280008118.01	MsG0380016290.01	0.867048	1.823959e-65	6.280115e-62
MsG0280008118.01	MsG0380016389.01	0.836675	8.142710e-57	1.033464e-53
MsG0280008118.01	MsG0380016604.01	0.811534	6.671028e-51	4.140005e-48
MsG0280008118.01	MsG0380016636.01	0.805454	1.324305e-49	7.009390e-47
MsG0280008118.01	MsG0380017330.01	0.805531	1.276473e-49	6.769129e-47
MsG0280008118.01	MsG0380017382.01	0.857559	1.503193e-62	3.725159e-59
MsG0280008118.01	MsG0380017476.01	0.834419	3.030627e-56	3.594633e-53
MsG0280008118.01	MsG0380017494.01	0.802929	4.442268e-49	2.203417e-46
MsG0280008118.01	MsG0380017511.01	0.818755	1.660862e-52	1.254157e-49
MsG0280008118.01	MsG0380017556.01	0.893040	9.101084e-75	8.531435e-71
MsG0280008118.01	MsG0380018033.01	0.831051	2.077823e-55	2.229069e-52
MsG0280008118.01	MsG0480018084.01	0.837449	5.163978e-57	6.710441e-54
MsG0280008118.01	MsG0480018278.01	0.816690	4.856222e-52	3.464676e-49
MsG0280008118.01	MsG0480018335.01	0.852445	4.593838e-61	9.601160e-58
MsG0280008118.01	MsG0480018477.01	0.909194	7.455527e-82	1.432784e-77
MsG0280008118.01	MsG0480018894.01	0.819970	8.781064e-53	6.858647e-50
MsG0280008118.01	MsG0480019380.01	0.825071	5.725476e-54	5.164599e-51
MsG0280008118.01	MsG0480019642.01	0.809462	1.870057e-50	1.098647e-47
MsG0280008118.01	MsG0480020959.01	0.856574	2.933655e-62	7.034400e-59
MsG0280008118.01	MsG0480021006.01	0.897316	1.582455e-76	1.777764e-72
MsG0280008118.01	MsG0480021037.01	0.842428	2.601115e-58	3.943221e-55
MsG0280008118.01	MsG0480021077.01	-0.840648	7.661137e-58	1.098366e-54
MsG0280008118.01	MsG0480021159.01	0.818738	1.675691e-52	1.264745e-49
MsG0280008118.01	MsG0480021448.01	0.810905	9.136608e-51	5.576790e-48
MsG0280008118.01	MsG0480021706.01	0.805235	1.472457e-49	7.749458e-47
MsG0280008118.01	MsG0480021832.01	0.845367	4.245838e-59	7.059048e-56
MsG0280008118.01	MsG0480021904.01	0.827854	1.243033e-54	1.214694e-51
MsG0280008118.01	MsG0480022223.01	0.813027	3.150712e-51	2.034669e-48
MsG0280008118.01	MsG0480022493.01	0.804686	1.917999e-49	9.952647e-47
MsG0280008118.01	MsG0480022780.01	0.808536	2.951857e-50	1.692108e-47
MsG0280008118.01	MsG0480022913.01	0.808082	3.688886e-50	2.089529e-47
MsG0280008118.01	MsG0480022960.01	0.852517	4.384245e-61	9.183975e-58
MsG0280008118.01	MsG0480023149.01	0.946836	2.153548e-105	3.617597e-100
MsG0280008118.01	MsG0480023221.01	0.843837	1.095761e-58	1.736075e-55
MsG0280008118.01	MsG0480023240.01	0.850406	1.733816e-60	3.392779e-57
MsG0280008118.01	MsG0480023387.01	0.857224	1.887542e-62	4.625423e-59
MsG0280008118.01	MsG0480023467.01	0.865172	7.162014e-65	2.308285e-61
MsG0280008118.01	MsG0480023559.01	0.880582	4.876075e-70	2.764182e-66
MsG0280008118.01	MsG0480023769.01	0.811290	7.537918e-51	4.647620e-48
MsG0280008118.01	MsG0480023771.01	0.803463	3.444217e-49	1.731940e-46
MsG0280008118.01	MsG0480023968.01	0.810790	9.673635e-51	5.886321e-48
MsG0280008118.01	MsG0580024084.01	0.841857	3.685299e-58	5.486266e-55
MsG0280008118.01	MsG0580024191.01	0.860200	2.438015e-63	6.610784e-60
MsG0280008118.01	MsG0580024339.01	0.811516	6.732264e-51	4.176068e-48
MsG0280008118.01	MsG0580024369.01	0.861944	7.186852e-64	2.068501e-60
MsG0280008118.01	MsG0580024619.01	0.830013	3.730265e-55	3.882001e-52
MsG0280008118.01	MsG0580025268.01	0.839302	1.718870e-57	2.363781e-54
MsG0280008118.01	MsG0580025400.01	0.880168	6.854985e-70	3.822788e-66
MsG0280008118.01	MsG0580025421.01	0.810520	1.106583e-50	6.684814e-48
MsG0280008118.01	MsG0580025491.01	-0.806596	7.617512e-50	4.151201e-47
MsG0280008118.01	MsG0580025651.01	0.821713	3.487203e-53	2.859134e-50
MsG0280008118.01	MsG0580025756.01	0.802413	5.677379e-49	2.779396e-46
MsG0280008118.01	MsG0580026157.01	0.816387	5.676735e-52	4.016821e-49
MsG0280008118.01	MsG0580026226.01	0.838554	2.683493e-57	3.607064e-54
MsG0280008118.01	MsG0580027043.01	0.921301	4.262881e-88	1.513012e-83
MsG0280008118.01	MsG0580028597.01	0.855963	4.432419e-62	1.041371e-58
MsG0280008118.01	MsG0580028606.01	0.810199	1.298068e-50	7.775309e-48
MsG0280008118.01	MsG0580029132.01	0.936935	7.821084e-98	6.881051e-93
MsG0280008118.01	MsG0580029283.01	0.865660	5.027616e-65	1.648974e-61
MsG0280008118.01	MsG0580029300.01	0.850199	1.982042e-60	3.852048e-57
MsG0280008118.01	MsG0580029370.01	0.848295	6.713885e-60	1.226467e-56
MsG0280008118.01	MsG0580029783.01	0.821190	4.605116e-53	3.721025e-50
MsG0280008118.01	MsG0580029801.01	0.830571	2.724304e-55	2.881349e-52
MsG0280008118.01	MsG0580030003.01	0.814734	1.324795e-51	8.960631e-49
MsG0280008118.01	MsG0580030204.01	0.810155	1.326368e-50	7.936055e-48
MsG0280008118.01	MsG0680030350.01	0.822276	2.582568e-53	2.151700e-50
MsG0280008118.01	MsG0680030968.01	0.850636	1.494020e-60	2.945507e-57
MsG0280008118.01	MsG0680031507.01	0.806413	8.326669e-50	4.516534e-47
MsG0280008118.01	MsG0680031628.01	0.859979	2.842802e-63	7.649408e-60
MsG0280008118.01	MsG0680031699.01	0.810123	1.348098e-50	8.059211e-48
MsG0280008118.01	MsG0680032770.01	0.838350	3.029554e-57	4.046760e-54
MsG0280008118.01	MsG0680034061.01	0.810195	1.300505e-50	7.788980e-48
MsG0280008118.01	MsG0680034671.01	0.834603	2.723841e-56	3.248545e-53
MsG0280008118.01	MsG0680035306.01	0.833118	6.408370e-56	7.310444e-53
MsG0280008118.01	MsG0680035514.01	0.822309	2.538619e-53	2.117037e-50
MsG0280008118.01	MsG0680035574.01	0.805082	1.584676e-49	8.307543e-47
MsG0280008118.01	MsG0680035577.01	0.838919	2.160208e-57	2.935951e-54
MsG0280008118.01	MsG0680035848.01	0.864696	1.009637e-64	3.198976e-61
MsG0280008118.01	MsG0680035854.01	0.858244	9.410616e-63	2.386059e-59
MsG0280008118.01	MsG0680035888.01	0.822982	1.769524e-53	1.504205e-50
MsG0280008118.01	MsG0780036240.01	0.924862	3.989386e-90	1.723935e-85
MsG0280008118.01	MsG0780036547.01	0.837995	3.740566e-57	4.943132e-54
MsG0280008118.01	MsG0780036822.01	0.852063	5.903565e-61	1.218913e-57
MsG0280008118.01	MsG0780037093.01	0.812757	3.611099e-51	2.315317e-48
MsG0280008118.01	MsG0780037240.01	0.829693	4.463414e-55	4.602698e-52
MsG0280008118.01	MsG0780038400.01	0.919422	4.591849e-87	1.474710e-82
MsG0280008118.01	MsG0780038587.01	0.909540	5.085383e-82	9.943578e-78
MsG0280008118.01	MsG0780038892.01	0.816790	4.612564e-52	3.300020e-49
MsG0280008118.01	MsG0780039340.01	0.843476	1.368848e-58	2.144229e-55
MsG0280008118.01	MsG0780039643.01	0.860559	1.898550e-63	5.211357e-60
MsG0280008118.01	MsG0780039848.01	0.829069	6.327421e-55	6.405584e-52
MsG0280008118.01	MsG0780039943.01	0.828174	1.041064e-54	1.026880e-51
MsG0280008118.01	MsG0780040070.01	0.857126	2.018761e-62	4.930480e-59
MsG0280008118.01	MsG0780040125.01	0.812336	4.463789e-51	2.830507e-48
MsG0280008118.01	MsG0780040338.01	0.903096	4.937066e-79	7.201085e-75
MsG0280008118.01	MsG0780040569.01	0.865748	4.715605e-65	1.551288e-61
MsG0280008118.01	MsG0780040718.01	0.831307	1.798147e-55	1.943669e-52
MsG0280008118.01	MsG0780040900.01	0.824473	7.920382e-54	7.022251e-51
MsG0280008118.01	MsG0780041137.01	0.802016	6.853613e-49	3.321266e-46
MsG0280008118.01	MsG0780041147.01	0.839386	1.634453e-57	2.253737e-54
MsG0280008118.01	MsG0780041223.01	0.943675	7.842526e-103	1.072749e-97
MsG0280008118.01	MsG0780041268.01	0.825872	3.698315e-54	3.413091e-51
MsG0280008118.01	MsG0780041295.01	0.838255	3.206618e-57	4.270495e-54
MsG0280008118.01	MsG0780041423.01	0.845174	4.787288e-59	7.910289e-56
MsG0280008118.01	MsG0780041462.01	0.817007	4.122081e-52	2.966817e-49
MsG0280008118.01	MsG0780041490.01	0.800504	1.397159e-48	6.516312e-46
MsG0280008118.01	MsG0780041519.01	0.873146	1.843268e-67	7.915609e-64
MsG0280008118.01	MsG0880041949.01	0.816710	4.805485e-52	3.430455e-49
MsG0280008118.01	MsG0880041967.01	0.802684	4.992489e-49	2.460918e-46
MsG0280008118.01	MsG0880042033.01	0.824084	9.773841e-54	8.570430e-51
MsG0280008118.01	MsG0880042128.01	0.834958	2.217983e-56	2.673595e-53
MsG0280008118.01	MsG0880042129.01	0.800938	1.139370e-48	5.373157e-46
MsG0280008118.01	MsG0880042519.01	0.817011	4.114581e-52	2.961726e-49
MsG0280008118.01	MsG0880042581.01	0.822695	2.063847e-53	1.740184e-50
MsG0280008118.01	MsG0880042604.01	0.810349	1.204955e-50	7.246155e-48
MsG0280008118.01	MsG0880042795.01	0.837544	4.881976e-57	6.362303e-54
MsG0280008118.01	MsG0880042991.01	0.886603	2.962856e-72	2.130650e-68
MsG0280008118.01	MsG0880043592.01	0.817800	2.732288e-52	2.009710e-49
MsG0280008118.01	MsG0880043770.01	0.862035	6.738435e-64	1.945707e-60
MsG0280008118.01	MsG0880044711.01	0.805376	1.375182e-49	7.263964e-47
MsG0280008118.01	MsG0880045631.01	0.826066	3.325399e-54	3.085704e-51
MsG0280008118.01	MsG0880045656.01	0.882387	1.087189e-70	6.608909e-67
MsG0280008118.01	MsG0880045684.01	0.837669	4.535549e-57	5.934586e-54
MsG0280008118.01	MsG0880046068.01	0.825833	3.778092e-54	3.482712e-51
MsG0280008118.01	MsG0880046074.01	0.848971	4.360778e-60	8.142808e-57
MsG0280008118.01	MsG0880046177.01	0.892087	2.192799e-74	1.974104e-70
MsG0280008118.01	MsG0880046237.01	0.822001	2.991140e-53	2.472523e-50
MsG0280008118.01	MsG0880046253.01	0.816091	6.611036e-52	4.640306e-49
MsG0280008118.01	MsG0880046444.01	0.866626	2.485426e-65	8.433504e-62
MsG0280008118.01	MsG0880046575.01	0.867868	9.960288e-66	3.530514e-62
MsG0280008118.01	MsG0880046879.01	0.805545	1.267574e-49	6.724482e-47
MsG0280008118.01	MsG0880046933.01	0.869505	2.943734e-66	1.107685e-62
MsG0280008118.01	MsG0880047212.01	0.820043	8.448381e-53	6.612580e-50
MsG0280008118.01	MsG0880047388.01	0.878536	2.594723e-69	1.359877e-65
MsG0280008118.01	MsG0880047427.01	0.813801	2.129502e-51	1.404428e-48
MsG0280008118.01	MsG0880047428.01	0.876530	1.297757e-68	6.313338e-65
MsG0280008118.01	MsG0880047470.01	0.802962	4.373271e-49	2.171021e-46
MsG0280008118.01	MsG0880047607.01	0.830365	3.060542e-55	3.217742e-52

PPI

Gene1	Gene2	Type
MsG0480021447.01	MsG0280008118.01	PPI
MsG0180001372.01	MsG0280008118.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008118.01.T01	MTR_2g035930	100.000	135	0	0	1	135	1	135	5.91e-95	270
MsG0280008118.01.T01	MTR_2g006170	99.259	135	1	0	1	135	1	135	2.02e-94	268
MsG0280008118.01.T01	MTR_3g048580	64.179	67	15	2	70	135	38	96	3.04e-19	77.0

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008118.01.T01	AT4G15000	86.667	135	18	1	135	1	135	7.88e-84	241
MsG0280008118.01.T01	AT3G22230	86.667	135	18	1	135	1	135	1.24e-83	241
MsG0280008118.01.T01	AT2G32220	80.000	135	27	1	135	1	135	7.77e-78	226
MsG0280008118.01.T01	AT4G15000	85.366	123	18	1	123	1	123	4.27e-73	214

Find 34 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACGATCACGGCTTTCTTCC+CGG	0.266318	2:-25656498	None:intergenic
TACGGGCATTGTCTTGTTGC+AGG	0.269826	2:+25656554	MsG0280008118.01.T01:CDS
GGTTTAAGACTGGGAAGAAT+AGG	0.401208	2:+25656801	MsG0280008118.01.T01:CDS
GGAACTCGCGACCGTGCTTA+CGG	0.402067	2:+25656536	MsG0280008118.01.T01:CDS
TACTGATGTTCTTCAGAGTA+AGG	0.417538	2:+25656730	MsG0280008118.01.T01:CDS
AGAACGATGACGGCTTTGTT+TGG	0.417683	2:-25656461	None:intergenic
TAAGAAGGTGACTGCTTTGA+AGG	0.432710	2:+25656754	MsG0280008118.01.T01:CDS
TCCTTCTTGATAACCTTAGC+TGG	0.439811	2:-25656590	None:intergenic
TTCTTCAAGGACGCTACGCC+GGG	0.449272	2:+25656480	MsG0280008118.01.T01:CDS
CTTCACACGCGATTTCTTCG+CGG	0.451730	2:-25656627	None:intergenic
GAACTCGCGACCGTGCTTAC+GGG	0.459112	2:+25656537	MsG0280008118.01.T01:CDS
GGTGGTTCTTTACCAAGCTC+AGG	0.462687	2:+25656822	MsG0280008118.01.T01:CDS
AAAGCCGTCATCGTTCTTCA+AGG	0.467401	2:+25656467	MsG0280008118.01.T01:CDS
GTCGAAATTCTTCACGATCA+CGG	0.498548	2:-25656510	None:intergenic
TTCGAGGAGAGGTTTAAGAC+TGG	0.506310	2:+25656791	MsG0280008118.01.T01:CDS
ACGGGCATTGTCTTGTTGCA+GGG	0.511441	2:+25656555	MsG0280008118.01.T01:CDS
CGCGAAGAAATCGCGTGTGA+AGG	0.529778	2:+25656628	MsG0280008118.01.T01:CDS
AACGAGTCGGCATCAGATGC+TGG	0.530504	2:-25656673	None:intergenic
CGAAGAAGAGGTTCGAGGAG+AGG	0.532977	2:+25656780	MsG0280008118.01.T01:CDS
TCCAGCTAAGGTTATCAAGA+AGG	0.538513	2:+25656589	MsG0280008118.01.T01:CDS
TCGAGGAGAGGTTTAAGACT+GGG	0.540939	2:+25656792	MsG0280008118.01.T01:CDS
AACAGCTCAAAACCTGAGCT+TGG	0.543643	2:-25656834	None:intergenic
TCTTGATGTTGATTTGAAAG+AGG	0.559046	2:+25656700	MsG0280008118.01.T01:CDS
TCTTCAGAGTAAGGATAAGA+AGG	0.568239	2:+25656739	MsG0280008118.01.T01:CDS
GTTCTTCAAGGACGCTACGC+CGG	0.577838	2:+25656479	MsG0280008118.01.T01:CDS
CAAGACAATGCCCGTAAGCA+CGG	0.587108	2:-25656547	None:intergenic
CTTTGAAGGAGGCGAAGAAG+AGG	0.602084	2:+25656768	MsG0280008118.01.T01:CDS
GATCAAGAAGTATCCAGCTA+AGG	0.602579	2:+25656577	MsG0280008118.01.T01:CDS
GGAGGCGAAGAAGAGGTTCG+AGG	0.607573	2:+25656775	MsG0280008118.01.T01:CDS
TTAAGACTGGGAAGAATAGG+TGG	0.614047	2:+25656804	MsG0280008118.01.T01:CDS
GAAGGTGACTGCTTTGAAGG+AGG	0.640915	2:+25656757	MsG0280008118.01.T01:CDS
GCGTCCTTGAAGAACGATGA+CGG	0.645066	2:-25656471	None:intergenic
ACATCAAGAGTGTAACGAGT+CGG	0.653533	2:-25656686	None:intergenic
ATCGTGAAGAATTTCGACGA+CGG	0.719572	2:+25656515	MsG0280008118.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCTTGATGTTGATTTGAAAG+AGG	+	Chr2:25656700-25656719	MsG0280008118.01.T01:CDS	30.0%
	TACTGATGTTCTTCAGAGTA+AGG	+	Chr2:25656730-25656749	MsG0280008118.01.T01:CDS	35.0%
	TCTTCAGAGTAAGGATAAGA+AGG	+	Chr2:25656739-25656758	MsG0280008118.01.T01:CDS	35.0%
	ATCGTGAAGAATTTCGACGA+CGG	+	Chr2:25656515-25656534	MsG0280008118.01.T01:CDS	40.0%
	GTCGAAATTCTTCACGATCA+CGG	-	Chr2:25656513-25656532	None:intergenic	40.0%
	TAAGAAGGTGACTGCTTTGA+AGG	+	Chr2:25656754-25656773	MsG0280008118.01.T01:CDS	40.0%
	TCCAGCTAAGGTTATCAAGA+AGG	+	Chr2:25656589-25656608	MsG0280008118.01.T01:CDS	40.0%
	TTAAGACTGGGAAGAATAGG+TGG	+	Chr2:25656804-25656823	MsG0280008118.01.T01:CDS	40.0%
!	ACATCAAGAGTGTAACGAGT+CGG	-	Chr2:25656689-25656708	None:intergenic	40.0%
!	GGTTTAAGACTGGGAAGAAT+AGG	+	Chr2:25656801-25656820	MsG0280008118.01.T01:CDS	40.0%
!	TCCTTCTTGATAACCTTAGC+TGG	-	Chr2:25656593-25656612	None:intergenic	40.0%
!!	GATCAAGAAGTATCCAGCTA+AGG	+	Chr2:25656577-25656596	MsG0280008118.01.T01:CDS	40.0%
	AAAGCCGTCATCGTTCTTCA+AGG	+	Chr2:25656467-25656486	MsG0280008118.01.T01:CDS	45.0%
!	TCGAGGAGAGGTTTAAGACT+GGG	+	Chr2:25656792-25656811	MsG0280008118.01.T01:CDS	45.0%
!	TTCGAGGAGAGGTTTAAGAC+TGG	+	Chr2:25656791-25656810	MsG0280008118.01.T01:CDS	45.0%
!!	AGAACGATGACGGCTTTGTT+TGG	-	Chr2:25656464-25656483	None:intergenic	45.0%
	CAAGACAATGCCCGTAAGCA+CGG	-	Chr2:25656550-25656569	None:intergenic	50.0%
	CTTCACACGCGATTTCTTCG+CGG	-	Chr2:25656630-25656649	None:intergenic	50.0%
	GCGTCCTTGAAGAACGATGA+CGG	-	Chr2:25656474-25656493	None:intergenic	50.0%
	GGTGGTTCTTTACCAAGCTC+AGG	+	Chr2:25656822-25656841	MsG0280008118.01.T01:CDS	50.0%
!	ACGGGCATTGTCTTGTTGCA+GGG	+	Chr2:25656555-25656574	MsG0280008118.01.T01:CDS	50.0%
!	CTTTGAAGGAGGCGAAGAAG+AGG	+	Chr2:25656768-25656787	MsG0280008118.01.T01:CDS	50.0%
!	TACGGGCATTGTCTTGTTGC+AGG	+	Chr2:25656554-25656573	MsG0280008118.01.T01:CDS	50.0%
!!	GAAGGTGACTGCTTTGAAGG+AGG	+	Chr2:25656757-25656776	MsG0280008118.01.T01:CDS	50.0%
	AACGAGTCGGCATCAGATGC+TGG	-	Chr2:25656676-25656695	None:intergenic	55.0%
	CACGATCACGGCTTTCTTCC+CGG	-	Chr2:25656501-25656520	None:intergenic	55.0%
	CGAAGAAGAGGTTCGAGGAG+AGG	+	Chr2:25656780-25656799	MsG0280008118.01.T01:CDS	55.0%
	CGCGAAGAAATCGCGTGTGA+AGG	+	Chr2:25656628-25656647	MsG0280008118.01.T01:CDS	55.0%
	GTTCTTCAAGGACGCTACGC+CGG	+	Chr2:25656479-25656498	MsG0280008118.01.T01:CDS	55.0%
	TTCTTCAAGGACGCTACGCC+GGG	+	Chr2:25656480-25656499	MsG0280008118.01.T01:CDS	55.0%
	GAACTCGCGACCGTGCTTAC+GGG	+	Chr2:25656537-25656556	MsG0280008118.01.T01:CDS	60.0%
	GGAACTCGCGACCGTGCTTA+CGG	+	Chr2:25656536-25656555	MsG0280008118.01.T01:CDS	60.0%
	GGAGGCGAAGAAGAGGTTCG+AGG	+	Chr2:25656775-25656794	MsG0280008118.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	25656443	25656850	25656443	ID=MsG0280008118.01;Name=MsG0280008118.01
Chr2	mRNA	25656443	25656850	25656443	ID=MsG0280008118.01.T01;Parent=MsG0280008118.01;Name=MsG0280008118.01.T01;_AED=0.41;_eAED=0.41;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|135
Chr2	exon	25656443	25656850	25656443	ID=MsG0280008118.01.T01:exon:34949;Parent=MsG0280008118.01.T01
Chr2	CDS	25656443	25656850	25656443	ID=MsG0280008118.01.T01:cds;Parent=MsG0280008118.01.T01

Gene Sequence

>MsG0280008118.01.T01

ATGGTGAAATTCTTGAAACCAAACAAAGCCGTCATCGTTCTTCAAGGACGCTACGCCGGGAAGAAAGCCGTGATCGTGAAGAATTTCGACGACGGAACTCGCGACCGTGCTTACGGGCATTGTCTTGTTGCAGGGATCAAGAAGTATCCAGCTAAGGTTATCAAGAAGGATTCAGCAAAGAAAACCGCGAAGAAATCGCGTGTGAAGGCTTTCGTGAAGCTTGTTAACTACCAGCATCTGATGCCGACTCGTTACACTCTTGATGTTGATTTGAAAGAGGTTGTTACTACTGATGTTCTTCAGAGTAAGGATAAGAAGGTGACTGCTTTGAAGGAGGCGAAGAAGAGGTTCGAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTCTTTACCAAGCTCAGGTTTTGA

Protein sequence

>MsG0280008118.01.T01

MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRDRAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF*