Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003778.01.T01 | XP_013468422.1 | 96.906 | 614 | 17 | 2 | 1 | 613 | 3 | 615 | 0 | 1234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003778.01.T01 | Q7XJ98 | 73.269 | 621 | 145 | 8 | 1 | 611 | 7 | 616 | 0 | 921 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003778.01.T01 | A0A072VKC5 | 96.906 | 614 | 17 | 2 | 1 | 613 | 3 | 615 | 0.0 | 1234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003778.01 | MsG0180005272.01 | 0.839349 | 1.671423e-57 | 2.301922e-54 |
| MsG0180003778.01 | MsG0280008854.01 | 0.818404 | 1.995280e-52 | 1.492250e-49 |
| MsG0180003778.01 | MsG0280009108.01 | 0.813927 | 1.998100e-51 | 1.322199e-48 |
| MsG0180003778.01 | MsG0380016927.01 | 0.844437 | 7.565064e-59 | 1.221206e-55 |
| MsG0180003778.01 | MsG0380017660.01 | 0.811359 | 7.284656e-51 | 4.499518e-48 |
| MsG0180003778.01 | MsG0480018125.01 | 0.822157 | 2.752475e-53 | 2.285342e-50 |
| MsG0180003778.01 | MsG0480019906.01 | 0.833795 | 4.344559e-56 | 5.057276e-53 |
| MsG0180003778.01 | MsG0480021977.01 | 0.804591 | 2.006696e-49 | 1.038753e-46 |
| MsG0180003778.01 | MsG0480023062.01 | 0.844279 | 8.339222e-59 | 1.339582e-55 |
| MsG0180003778.01 | MsG0480023697.01 | 0.807612 | 4.643379e-50 | 2.597867e-47 |
| MsG0180003778.01 | MsG0480023987.01 | 0.803000 | 4.296159e-49 | 2.134673e-46 |
| MsG0180003778.01 | MsG0580025730.01 | 0.802061 | 6.706886e-49 | 3.253966e-46 |
| MsG0180003778.01 | MsG0580025746.01 | 0.808454 | 3.072472e-50 | 1.757591e-47 |
| MsG0180003778.01 | MsG0780036843.01 | 0.870765 | 1.139796e-66 | 4.485859e-63 |
| MsG0180003778.01 | MsG0780037406.01 | 0.813639 | 2.311361e-51 | 1.517686e-48 |
| MsG0180003778.01 | MsG0780040136.01 | 0.813275 | 2.778968e-51 | 1.806724e-48 |
| MsG0180003778.01 | MsG0780040323.01 | 0.815924 | 7.204160e-52 | 5.033268e-49 |
| MsG0180003778.01 | MsG0780041180.01 | 0.800681 | 1.285932e-48 | 6.024528e-46 |
| MsG0180003778.01 | MsG0780041548.01 | 0.803544 | 3.314607e-49 | 1.670269e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003778.01.T01 | MTR_1g069460 | 96.906 | 614 | 17 | 2 | 1 | 613 | 3 | 615 | 0.0 | 1234 |
| MsG0180003778.01.T01 | MTR_7g098650 | 75.941 | 611 | 71 | 6 | 1 | 610 | 1 | 536 | 0.0 | 940 |
| MsG0180003778.01.T01 | MTR_4g129930 | 56.250 | 400 | 170 | 3 | 150 | 545 | 69 | 467 | 6.15e-170 | 492 |
| MsG0180003778.01.T01 | MTR_3g084400 | 52.358 | 424 | 194 | 4 | 149 | 565 | 61 | 483 | 7.04e-168 | 487 |
| MsG0180003778.01.T01 | MTR_5g055350 | 53.349 | 418 | 179 | 5 | 138 | 544 | 35 | 447 | 1.55e-161 | 470 |
| MsG0180003778.01.T01 | MTR_5g095940 | 53.102 | 403 | 183 | 3 | 150 | 546 | 92 | 494 | 1.06e-153 | 452 |
| MsG0180003778.01.T01 | MTR_3g007840 | 50.370 | 405 | 168 | 5 | 150 | 546 | 20 | 399 | 7.82e-140 | 413 |
| MsG0180003778.01.T01 | MTR_5g095950 | 45.921 | 429 | 192 | 6 | 150 | 570 | 65 | 461 | 1.57e-130 | 392 |
| MsG0180003778.01.T01 | MTR_1g035730 | 45.026 | 382 | 201 | 3 | 157 | 536 | 77 | 451 | 1.64e-114 | 350 |
| MsG0180003778.01.T01 | MTR_5g010370 | 40.988 | 405 | 224 | 7 | 145 | 543 | 151 | 546 | 6.76e-110 | 341 |
| MsG0180003778.01.T01 | MTR_1g102430 | 42.821 | 397 | 215 | 7 | 149 | 538 | 97 | 488 | 1.25e-105 | 328 |
| MsG0180003778.01.T01 | MTR_5g010350 | 41.728 | 405 | 221 | 7 | 145 | 543 | 127 | 522 | 1.65e-104 | 326 |
| MsG0180003778.01.T01 | MTR_4g119810 | 36.322 | 435 | 240 | 10 | 126 | 539 | 26 | 444 | 5.92e-84 | 270 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003778.01.T01 | AT2G20370 | 73.269 | 621 | 145 | 8 | 1 | 611 | 7 | 616 | 0.0 | 921 |
| MsG0180003778.01.T01 | AT2G29040 | 56.444 | 450 | 183 | 6 | 142 | 585 | 288 | 730 | 0.0 | 542 |
| MsG0180003778.01.T01 | AT4G13990 | 50.957 | 418 | 200 | 4 | 152 | 565 | 95 | 511 | 1.15e-160 | 470 |
| MsG0180003778.01.T01 | AT4G13990 | 50.957 | 418 | 200 | 4 | 152 | 565 | 95 | 511 | 1.15e-160 | 470 |
| MsG0180003778.01.T01 | AT2G32750 | 49.761 | 418 | 202 | 4 | 139 | 550 | 72 | 487 | 4.32e-158 | 463 |
| MsG0180003778.01.T01 | AT2G32750 | 49.761 | 418 | 202 | 4 | 139 | 550 | 70 | 485 | 5.25e-158 | 463 |
| MsG0180003778.01.T01 | AT2G32740 | 46.602 | 412 | 209 | 6 | 141 | 543 | 55 | 464 | 6.24e-142 | 421 |
| MsG0180003778.01.T01 | AT2G31990 | 50.000 | 406 | 192 | 7 | 150 | 545 | 70 | 474 | 2.51e-141 | 419 |
| MsG0180003778.01.T01 | AT2G31990 | 50.000 | 406 | 192 | 7 | 150 | 545 | 78 | 482 | 3.29e-141 | 419 |
| MsG0180003778.01.T01 | AT2G31990 | 50.000 | 406 | 192 | 7 | 150 | 545 | 116 | 520 | 9.67e-141 | 419 |
| MsG0180003778.01.T01 | AT1G68470 | 45.812 | 382 | 193 | 6 | 157 | 535 | 73 | 443 | 5.56e-113 | 346 |
| MsG0180003778.01.T01 | AT5G62220 | 43.467 | 398 | 217 | 5 | 152 | 544 | 118 | 512 | 1.43e-110 | 342 |
| MsG0180003778.01.T01 | AT5G41250 | 40.452 | 398 | 221 | 7 | 147 | 540 | 172 | 557 | 4.97e-108 | 337 |
| MsG0180003778.01.T01 | AT1G63450 | 41.089 | 404 | 222 | 8 | 142 | 539 | 267 | 660 | 6.68e-108 | 339 |
| MsG0180003778.01.T01 | AT4G22580 | 36.160 | 401 | 237 | 8 | 152 | 539 | 37 | 431 | 8.09e-80 | 259 |
Find 150 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGCACGTTATCTT+TGG | 0.193030 | 1:+68110456 | MsG0180003778.01.T01:CDS |
| CCGTGGAATGCAAATGATTT+TGG | 0.193783 | 1:+68110701 | MsG0180003778.01.T01:CDS |
| CAACCGCCTCCGAGGAAAAT+TGG | 0.202255 | 1:+68109993 | MsG0180003778.01.T01:CDS |
| AGTGTAAAAGTTTGAGTCTT+TGG | 0.218524 | 1:+68110231 | MsG0180003778.01.T01:CDS |
| CTCCCTGACCAAATGGAAAA+AGG | 0.223737 | 1:+68109741 | MsG0180003778.01.T01:CDS |
| CTCATGATTCTCACTTGTTC+AGG | 0.224742 | 1:-68111196 | None:intergenic |
| TGATATTGCACGTTATCTTT+GGG | 0.257423 | 1:+68110457 | MsG0180003778.01.T01:CDS |
| TCCTTCTTCTCCTCCTTCTC+AGG | 0.281758 | 1:-68110086 | None:intergenic |
| TTCTCCTCCTTCTCAGGGAC+AGG | 0.298751 | 1:-68110080 | None:intergenic |
| GAATACTTGGTATAATTCTT+AGG | 0.301851 | 1:-68111103 | None:intergenic |
| TTCTCCGGTTGGTAAGCTTT+TGG | 0.334154 | 1:+68110889 | MsG0180003778.01.T01:CDS |
| AACAGAAACAGGTGTTGATT+TGG | 0.343201 | 1:-68109910 | None:intergenic |
| CTCTTTACCGCAACAGGGTC+AGG | 0.348005 | 1:-68110050 | None:intergenic |
| GCCTTTGATTCCATGTTGGC+TGG | 0.352901 | 1:+68111022 | MsG0180003778.01.T01:CDS |
| TAGTAGTATTATCAGCTCTA+AGG | 0.355547 | 1:-68109854 | None:intergenic |
| TTTACTACCAATGCTGGTCT+TGG | 0.356831 | 1:+68110269 | MsG0180003778.01.T01:CDS |
| GTGTCACTCTTTACCGCAAC+AGG | 0.361158 | 1:-68110056 | None:intergenic |
| CTGATTGATTTGGCATTGTC+AGG | 0.361929 | 1:-68110839 | None:intergenic |
| GTGTCATTCTTTATCACAAC+AGG | 0.366075 | 1:-68110026 | None:intergenic |
| TTGATGTTATATTTAGCAAT+AGG | 0.366737 | 1:+68110360 | MsG0180003778.01.T01:CDS |
| ACAGTTCTGCTTGCAACCTC+AGG | 0.370804 | 1:+68110976 | MsG0180003778.01.T01:CDS |
| CTGACAATGCCAAATCAATC+AGG | 0.371478 | 1:+68110840 | MsG0180003778.01.T01:CDS |
| TTCTTTATCACAACAGGGTC+AGG | 0.396330 | 1:-68110020 | None:intergenic |
| TAACTGACCCCTGATTGATT+TGG | 0.399847 | 1:-68110849 | None:intergenic |
| CTTCGCTTGATCTGGTTGAC+TGG | 0.401762 | 1:+68110507 | MsG0180003778.01.T01:CDS |
| GGATGCGGCTTCGCTTGATC+TGG | 0.401985 | 1:+68110499 | MsG0180003778.01.T01:CDS |
| CCGCCGCTTGAGAATGTTGA+AGG | 0.412234 | 1:+68110293 | MsG0180003778.01.T01:CDS |
| ATGTGCATGATCTTCCTTCA+AGG | 0.413105 | 1:+68110186 | MsG0180003778.01.T01:CDS |
| TCATCAAAATGAACAGAAAC+AGG | 0.419490 | 1:-68109921 | None:intergenic |
| AACCGCCTCCGAGGAAAATT+GGG | 0.428718 | 1:+68109994 | MsG0180003778.01.T01:CDS |
| ATGAGACGGCGCCCTGTGGC+GGG | 0.436273 | 1:+68109714 | MsG0180003778.01.T01:CDS |
| CTCTTACGAATGTCATCCTC+TGG | 0.436463 | 1:-68111136 | None:intergenic |
| TTGACAAAGTTACACATTTG+AGG | 0.437236 | 1:+68111320 | MsG0180003778.01.T01:CDS |
| CGGCATACACACAGTATACT+TGG | 0.437623 | 1:+68111074 | MsG0180003778.01.T01:CDS |
| ATATCCTCATTAAACCTTGA+AGG | 0.437861 | 1:-68110200 | None:intergenic |
| TTTATGAAAGCGTTGAAAAC+CGG | 0.445498 | 1:+68110125 | MsG0180003778.01.T01:CDS |
| AATGAGACGGCGCCCTGTGG+CGG | 0.447625 | 1:+68109713 | None:intergenic |
| ACGAGGTTGGTCCTCATGAA+TGG | 0.447808 | 1:+68111425 | MsG0180003778.01.T01:CDS |
| CCCTGAGAAGGAGGAGAAGA+AGG | 0.450012 | 1:+68110085 | MsG0180003778.01.T01:CDS |
| AAACATCTGCATTATGCTGC+TGG | 0.450155 | 1:-68110945 | None:intergenic |
| TGTCTTCTTCCATCCAGGTT+CGG | 0.450428 | 1:+68111054 | MsG0180003778.01.T01:CDS |
| GAGGTTTATCAATTACATCA+TGG | 0.456581 | 1:-68109956 | None:intergenic |
| TTACTACCAATGCTGGTCTT+GGG | 0.458270 | 1:+68110270 | MsG0180003778.01.T01:CDS |
| TCTCCTCCTTCTCAGGGACA+GGG | 0.458535 | 1:-68110079 | None:intergenic |
| CCTTCTTCTCCTCCTTCTCA+GGG | 0.461076 | 1:-68110085 | None:intergenic |
| GGGCGTTCTCCCTGACCAAA+TGG | 0.465316 | 1:+68109734 | MsG0180003778.01.T01:CDS |
| TCAGGGAGAACGCCCGCCAC+AGG | 0.465895 | 1:-68109726 | None:intergenic |
| AAAATAAGAGTGATCCTTGT+GGG | 0.471762 | 1:+68110150 | MsG0180003778.01.T01:CDS |
| ATACCTGTCTTCTTCCATCC+AGG | 0.473157 | 1:+68111049 | MsG0180003778.01.T01:CDS |
| AGGTTTATCAATTACATCAT+GGG | 0.478661 | 1:-68109955 | None:intergenic |
| GGGTGGAAGTATGTAGGATA+AGG | 0.483181 | 1:-68110728 | None:intergenic |
| TGAGGCGATTAGAGAGGAAG+TGG | 0.488880 | 1:+68110789 | MsG0180003778.01.T01:CDS |
| GTCTGCCTTTGATTCCATGT+TGG | 0.489602 | 1:+68111018 | MsG0180003778.01.T01:CDS |
| CGGCGGCCCAAGACCAGCAT+TGG | 0.493353 | 1:-68110276 | None:intergenic |
| CAGTTGGAAATATGCTTTGT+TGG | 0.497546 | 1:+68111390 | MsG0180003778.01.T01:CDS |
| GAAATATGCTTTGTTGGATG+AGG | 0.505037 | 1:+68111396 | MsG0180003778.01.T01:CDS |
| TGATTTGGCATTGTCAGGAC+GGG | 0.505393 | 1:-68110834 | None:intergenic |
| TACTGTGTGTATGCCGAACC+TGG | 0.505471 | 1:-68111067 | None:intergenic |
| CGAGGTTGGTCCTCATGAAT+GGG | 0.505576 | 1:+68111426 | MsG0180003778.01.T01:CDS |
| TGGAATGAAGACAGAATACT+TGG | 0.505827 | 1:-68111116 | None:intergenic |
| TGTAAGTTTACTACCAATGC+TGG | 0.507525 | 1:+68110263 | MsG0180003778.01.T01:CDS |
| GTTTAATGAGGATATGTTGA+AGG | 0.509728 | 1:+68110208 | MsG0180003778.01.T01:CDS |
| AAGATGCTGATGTGTTCAAT+TGG | 0.511920 | 1:+68110756 | MsG0180003778.01.T01:CDS |
| CCGGAGTGGAGTATAATGAA+TGG | 0.516300 | 1:+68110542 | MsG0180003778.01.T01:CDS |
| TGTCTGAGGAAGAAACAGAC+TGG | 0.516652 | 1:+68110615 | MsG0180003778.01.T01:CDS |
| TTTGCAGGGTGGAAGTATGT+AGG | 0.517211 | 1:-68110734 | None:intergenic |
| GTATGCGACAAATCAGTTTG+CGG | 0.518425 | 1:+68110337 | MsG0180003778.01.T01:CDS |
| TCTTCCTTCAAGGTTTAATG+AGG | 0.519335 | 1:+68110196 | MsG0180003778.01.T01:CDS |
| TGAGCAATGTAGAAGTTCTC+CGG | 0.519680 | 1:+68110874 | MsG0180003778.01.T01:CDS |
| GGGTCAGCATATACTAGTCT+TGG | 0.523979 | 1:-68111241 | None:intergenic |
| TGCTGATGTGTTCAATTGGC+AGG | 0.526163 | 1:+68110760 | MsG0180003778.01.T01:CDS |
| ATGAGTATCGAGGAAATACT+TGG | 0.526952 | 1:+68111163 | MsG0180003778.01.T01:CDS |
| ACTTCATTGAGGAGAACAGT+TGG | 0.528023 | 1:+68111374 | MsG0180003778.01.T01:CDS |
| CGGAGTGGAGTATAATGAAT+GGG | 0.528397 | 1:+68110543 | MsG0180003778.01.T01:CDS |
| CAGAGGATGACATTCGTAAG+AGG | 0.529415 | 1:+68111137 | MsG0180003778.01.T01:CDS |
| TAATATCTCGAGGAGGGATG+CGG | 0.531248 | 1:+68110484 | MsG0180003778.01.T01:CDS |
| CGCCGCTTGAGAATGTTGAA+GGG | 0.533893 | 1:+68110294 | MsG0180003778.01.T01:CDS |
| CATTCCAAAAGCTTACCAAC+CGG | 0.535445 | 1:-68110893 | None:intergenic |
| ATGGACATATTCTTTGCTGC+CGG | 0.540988 | 1:-68110659 | None:intergenic |
| ATATCAAACCCAGCATAAAA+CGG | 0.541005 | 1:-68110440 | None:intergenic |
| AAATATGCTTTGTTGGATGA+GGG | 0.541599 | 1:+68111397 | MsG0180003778.01.T01:CDS |
| CAAAGTTACACATTTGAGGA+AGG | 0.543709 | 1:+68111324 | MsG0180003778.01.T01:CDS |
| GTCTGAGGAAGAAACAGACT+GGG | 0.543879 | 1:+68110616 | MsG0180003778.01.T01:CDS |
| CCAAAATCATTTGCATTCCA+CGG | 0.546391 | 1:-68110701 | None:intergenic |
| GCCAGCCAACATGGAATCAA+AGG | 0.555175 | 1:-68111023 | None:intergenic |
| CTCCTCCTTCTCAGGGACAG+GGG | 0.555383 | 1:-68110078 | None:intergenic |
| GATATTGCACGTTATCTTTG+GGG | 0.556924 | 1:+68110458 | MsG0180003778.01.T01:CDS |
| CACCCCTGTCCCTGAGAAGG+AGG | 0.557721 | 1:+68110076 | MsG0180003778.01.T01:CDS |
| TTGATTTGGCATTGTCAGGA+CGG | 0.559182 | 1:-68110835 | None:intergenic |
| TTGTTGCGGGGAGGATAACG+TGG | 0.563860 | 1:+68110579 | MsG0180003778.01.T01:CDS |
| AGTGAGAATCATGAGAGAAG+AGG | 0.567837 | 1:+68111204 | MsG0180003778.01.T01:CDS |
| CAGGGAGAACGCCCGCCACA+GGG | 0.568388 | 1:-68109725 | None:intergenic |
| TCTTTACCGCAACAGGGTCA+GGG | 0.571861 | 1:-68110049 | None:intergenic |
| CAGTTCTGCTTGCAACCTCA+GGG | 0.574443 | 1:+68110977 | MsG0180003778.01.T01:CDS |
| ATGATTCTCACTTGTTCAGG+AGG | 0.576058 | 1:-68111193 | None:intergenic |
| AAAGAATATGTCCATGCTTG+TGG | 0.578138 | 1:+68110667 | MsG0180003778.01.T01:CDS |
| GAGTTTCTAACTTGGAGCGA+GGG | 0.580423 | 1:-68111261 | None:intergenic |
| GAACCTGGATGGAAGAAGAC+AGG | 0.581328 | 1:-68111052 | None:intergenic |
| TGACACCCCTGTCCCTGAGA+AGG | 0.581426 | 1:+68110073 | MsG0180003778.01.T01:CDS |
| GTCTCTAAGAGTTTCTAACT+TGG | 0.582080 | 1:-68111269 | None:intergenic |
| AACATCTGCATTATGCTGCT+GGG | 0.583163 | 1:-68110944 | None:intergenic |
| TCAATTGGCAGGACAGAATG+AGG | 0.584744 | 1:+68110771 | MsG0180003778.01.T01:CDS |
| AGGTATACAGCCAGCCAACA+TGG | 0.585934 | 1:-68111032 | None:intergenic |
| TGACAATGCCAAATCAATCA+GGG | 0.586683 | 1:+68110841 | MsG0180003778.01.T01:CDS |
| ATCATGAGAGAAGAGGTCAT+TGG | 0.590128 | 1:+68111211 | MsG0180003778.01.T01:CDS |
| GTGGAGTATAATGAATGGGA+AGG | 0.593191 | 1:+68110547 | MsG0180003778.01.T01:CDS |
| GGGTTATAATATCTCGAGGA+GGG | 0.593478 | 1:+68110478 | MsG0180003778.01.T01:CDS |
| GGCTTATGAAGAGGCCGGAG+TGG | 0.594655 | 1:+68110528 | MsG0180003778.01.T01:CDS |
| GCCGCTTGAGAATGTTGAAG+GGG | 0.594748 | 1:+68110295 | MsG0180003778.01.T01:CDS |
| GTGTGTATGCCGAACCTGGA+TGG | 0.606530 | 1:-68111063 | None:intergenic |
| CCTTCAACATTCTCAAGCGG+CGG | 0.606943 | 1:-68110293 | None:intergenic |
| GGTTGCGATGATTTAACTCG+AGG | 0.608916 | 1:-68109975 | None:intergenic |
| ACTCGACTCTACCACAAGCA+TGG | 0.610855 | 1:-68110678 | None:intergenic |
| TGACTGGCTTATGAAGAGGC+CGG | 0.613272 | 1:+68110523 | MsG0180003778.01.T01:CDS |
| CAATGTAGAAGTTCTCCGGT+TGG | 0.619092 | 1:+68110878 | MsG0180003778.01.T01:CDS |
| CTTTACCGCAACAGGGTCAG+GGG | 0.619249 | 1:-68110048 | None:intergenic |
| GTGATCATCAACAAATTGAG+TGG | 0.619603 | 1:-68109883 | None:intergenic |
| GATTTGGCATTGTCAGGACG+GGG | 0.620412 | 1:-68110833 | None:intergenic |
| TGACACCCCTGACCCTGTTG+CGG | 0.622233 | 1:+68110043 | MsG0180003778.01.T01:CDS |
| TGGTTGACTGGCTTATGAAG+AGG | 0.623329 | 1:+68110519 | MsG0180003778.01.T01:CDS |
| GATGAGGGAAAACACGAGGT+TGG | 0.623860 | 1:+68111412 | MsG0180003778.01.T01:CDS |
| CCATTCATTATACTCCACTC+CGG | 0.623909 | 1:-68110542 | None:intergenic |
| GTATTCTGTCTTCATTCCAG+AGG | 0.624692 | 1:+68111120 | MsG0180003778.01.T01:CDS |
| AATCATCGCAACCGCCTCCG+AGG | 0.627422 | 1:+68109985 | MsG0180003778.01.T01:CDS |
| ACCCCTTCAACATTCTCAAG+CGG | 0.628618 | 1:-68110296 | None:intergenic |
| ACAGAATGAGGCGATTAGAG+AGG | 0.639158 | 1:+68110783 | MsG0180003778.01.T01:CDS |
| TTTGGGGTTATAATATCTCG+AGG | 0.641133 | 1:+68110474 | MsG0180003778.01.T01:CDS |
| TTGATTGAATGCAAATGAGA+CGG | 0.643214 | 1:+68109700 | None:intergenic |
| TGTTGCGGGGAGGATAACGT+GGG | 0.647158 | 1:+68110580 | MsG0180003778.01.T01:CDS |
| AAGAAAGGATCCCATTCATG+AGG | 0.647321 | 1:-68111436 | None:intergenic |
| AATAAGAGTGATCCTTGTGG+GGG | 0.649379 | 1:+68110152 | MsG0180003778.01.T01:CDS |
| AGAGTTTCTAACTTGGAGCG+AGG | 0.650203 | 1:-68111262 | None:intergenic |
| GGGGTTATAATATCTCGAGG+AGG | 0.650227 | 1:+68110477 | MsG0180003778.01.T01:CDS |
| GAAAATAAGAGTGATCCTTG+TGG | 0.653504 | 1:+68110149 | MsG0180003778.01.T01:CDS |
| AAATAAGAGTGATCCTTGTG+GGG | 0.657313 | 1:+68110151 | MsG0180003778.01.T01:CDS |
| GCAAATGAGACGGCGCCCTG+TGG | 0.665026 | 1:+68109710 | None:intergenic |
| GACAATGCCAAATCAATCAG+GGG | 0.665818 | 1:+68110842 | MsG0180003778.01.T01:CDS |
| TAAGAGGAACATGAGTATCG+AGG | 0.675462 | 1:+68111153 | MsG0180003778.01.T01:CDS |
| AGGGTGATTCATACACTCGA+AGG | 0.675831 | 1:+68110996 | MsG0180003778.01.T01:CDS |
| TGAGAAGGAGGAGAAGAAGG+AGG | 0.678894 | 1:+68110088 | MsG0180003778.01.T01:CDS |
| AGCTTCAGCAGATGAATCAG+TGG | 0.683333 | 1:-68111491 | None:intergenic |
| GTTGGATGAGGGAAAACACG+AGG | 0.683608 | 1:+68111408 | MsG0180003778.01.T01:CDS |
| TGTCACTCTTTACCGCAACA+GGG | 0.687983 | 1:-68110055 | None:intergenic |
| TTGTGGTAGAGTCGAGTCCG+TGG | 0.690146 | 1:+68110684 | MsG0180003778.01.T01:CDS |
| TGTCATTCTTTATCACAACA+GGG | 0.695657 | 1:-68110025 | None:intergenic |
| CTGAGGAAGAAACAGACTGG+GGG | 0.706384 | 1:+68110618 | MsG0180003778.01.T01:CDS |
| ATAAGAGTGATCCTTGTGGG+GGG | 0.715435 | 1:+68110153 | MsG0180003778.01.T01:CDS |
| TCTGAGGAAGAAACAGACTG+GGG | 0.732806 | 1:+68110617 | MsG0180003778.01.T01:CDS |
| GCAGTATGAGTGCTTGACTG+AGG | 0.734277 | 1:+68110388 | MsG0180003778.01.T01:CDS |
| CGAGTGTATGAATCACCCTG+AGG | 0.742346 | 1:-68110992 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGATAAAAACTTCATTG+AGG | + | Chr1:68111363-68111382 | MsG0180003778.01.T01:CDS | 20.0% |
| !! | TTGATGTTATATTTAGCAAT+AGG | + | Chr1:68110360-68110379 | MsG0180003778.01.T01:CDS | 20.0% |
| ! | AGGTTTATCAATTACATCAT+GGG | - | Chr1:68109958-68109977 | None:intergenic | 25.0% |
| ! | GAATACTTGGTATAATTCTT+AGG | - | Chr1:68111106-68111125 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCAAAAAATGA+TGG | + | Chr1:68111457-68111476 | MsG0180003778.01.T01:CDS | 25.0% |
| !!! | TTTTTTGGTTTTGAGAAGAA+AGG | - | Chr1:68111454-68111473 | None:intergenic | 25.0% |
| AAAATAAGAGTGATCCTTGT+GGG | + | Chr1:68110150-68110169 | MsG0180003778.01.T01:CDS | 30.0% | |
| AAACCAAAAAATGATGGTAG+TGG | + | Chr1:68111463-68111482 | MsG0180003778.01.T01:CDS | 30.0% | |
| AGTGTAAAAGTTTGAGTCTT+TGG | + | Chr1:68110231-68110250 | MsG0180003778.01.T01:CDS | 30.0% | |
| ATATCAAACCCAGCATAAAA+CGG | - | Chr1:68110443-68110462 | None:intergenic | 30.0% | |
| ATATCCTCATTAAACCTTGA+AGG | - | Chr1:68110203-68110222 | None:intergenic | 30.0% | |
| GAGGTTTATCAATTACATCA+TGG | - | Chr1:68109959-68109978 | None:intergenic | 30.0% | |
| GTTTAATGAGGATATGTTGA+AGG | + | Chr1:68110208-68110227 | MsG0180003778.01.T01:CDS | 30.0% | |
| TAGTAGTATTATCAGCTCTA+AGG | - | Chr1:68109857-68109876 | None:intergenic | 30.0% | |
| TCATCAAAATGAACAGAAAC+AGG | - | Chr1:68109924-68109943 | None:intergenic | 30.0% | |
| TGATATTGCACGTTATCTTT+GGG | + | Chr1:68110457-68110476 | MsG0180003778.01.T01:CDS | 30.0% | |
| TGTCATTCTTTATCACAACA+GGG | - | Chr1:68110028-68110047 | None:intergenic | 30.0% | |
| TTGACAAAGTTACACATTTG+AGG | + | Chr1:68111320-68111339 | MsG0180003778.01.T01:CDS | 30.0% | |
| TTGATATTGCACGTTATCTT+TGG | + | Chr1:68110456-68110475 | MsG0180003778.01.T01:CDS | 30.0% | |
| ! | AAATATGCTTTGTTGGATGA+GGG | + | Chr1:68111397-68111416 | MsG0180003778.01.T01:CDS | 30.0% |
| ! | ATTTTTGTTCCGTTTTATGC+TGG | + | Chr1:68110431-68110450 | MsG0180003778.01.T01:CDS | 30.0% |
| ! | CTTCTTTATCAGCTTTTCTA+TGG | + | Chr1:68109802-68109821 | MsG0180003778.01.T01:CDS | 30.0% |
| ! | GTTTTCAACGCTTTCATAAA+AGG | - | Chr1:68110125-68110144 | None:intergenic | 30.0% |
| ! | TTTTTGTTCCGTTTTATGCT+GGG | + | Chr1:68110432-68110451 | MsG0180003778.01.T01:CDS | 30.0% |
| !! | TTTATGAAAGCGTTGAAAAC+CGG | + | Chr1:68110125-68110144 | MsG0180003778.01.T01:CDS | 30.0% |
| !!! | GAATAAGCTTCTGTTTTTAC+CGG | + | Chr1:68110640-68110659 | MsG0180003778.01.T01:CDS | 30.0% |
| AAAGAATATGTCCATGCTTG+TGG | + | Chr1:68110667-68110686 | MsG0180003778.01.T01:CDS | 35.0% | |
| AAATAAGAGTGATCCTTGTG+GGG | + | Chr1:68110151-68110170 | MsG0180003778.01.T01:CDS | 35.0% | |
| AAGATGCTGATGTGTTCAAT+TGG | + | Chr1:68110756-68110775 | MsG0180003778.01.T01:CDS | 35.0% | |
| CAAAGTTACACATTTGAGGA+AGG | + | Chr1:68111324-68111343 | MsG0180003778.01.T01:CDS | 35.0% | |
| CAGTTGGAAATATGCTTTGT+TGG | + | Chr1:68111390-68111409 | MsG0180003778.01.T01:CDS | 35.0% | |
| CCAAAATCATTTGCATTCCA+CGG | - | Chr1:68110704-68110723 | None:intergenic | 35.0% | |
| CTGAAGCTGCAAAAAATTCT+TGG | + | Chr1:68111506-68111525 | MsG0180003778.01.T01:CDS | 35.0% | |
| GAAAATAAGAGTGATCCTTG+TGG | + | Chr1:68110149-68110168 | MsG0180003778.01.T01:CDS | 35.0% | |
| GATATTGCACGTTATCTTTG+GGG | + | Chr1:68110458-68110477 | MsG0180003778.01.T01:CDS | 35.0% | |
| GTGATCATCAACAAATTGAG+TGG | - | Chr1:68109886-68109905 | None:intergenic | 35.0% | |
| TCTTCCTTCAAGGTTTAATG+AGG | + | Chr1:68110196-68110215 | MsG0180003778.01.T01:CDS | 35.0% | |
| TGACAATGCCAAATCAATCA+GGG | + | Chr1:68110841-68110860 | MsG0180003778.01.T01:CDS | 35.0% | |
| TGGAATGAAGACAGAATACT+TGG | - | Chr1:68111119-68111138 | None:intergenic | 35.0% | |
| TGTAAGTTTACTACCAATGC+TGG | + | Chr1:68110263-68110282 | MsG0180003778.01.T01:CDS | 35.0% | |
| ! | AAGGATCATTTTCTTGTTGC+GGG | + | Chr1:68110566-68110585 | MsG0180003778.01.T01:CDS | 35.0% |
| ! | GAAATATGCTTTGTTGGATG+AGG | + | Chr1:68111396-68111415 | MsG0180003778.01.T01:CDS | 35.0% |
| ! | GAAGGATCATTTTCTTGTTG+CGG | + | Chr1:68110565-68110584 | MsG0180003778.01.T01:CDS | 35.0% |
| ! | GTCTCTAAGAGTTTCTAACT+TGG | - | Chr1:68111272-68111291 | None:intergenic | 35.0% |
| ! | GTGTCATTCTTTATCACAAC+AGG | - | Chr1:68110029-68110048 | None:intergenic | 35.0% |
| ! | TTTGGGGTTATAATATCTCG+AGG | + | Chr1:68110474-68110493 | MsG0180003778.01.T01:CDS | 35.0% |
| !! | AACAGAAACAGGTGTTGATT+TGG | - | Chr1:68109913-68109932 | None:intergenic | 35.0% |
| !! | ATGAGTATCGAGGAAATACT+TGG | + | Chr1:68111163-68111182 | MsG0180003778.01.T01:CDS | 35.0% |
| !!! | AAGCTTTTGGAATGTGACTT+TGG | + | Chr1:68110902-68110921 | MsG0180003778.01.T01:CDS | 35.0% |
| !!! | AGGATCACTCTTATTTTCAC+CGG | - | Chr1:68110147-68110166 | None:intergenic | 35.0% |
| !!! | TCTCCACTACCATCATTTTT+TGG | - | Chr1:68111469-68111488 | None:intergenic | 35.0% |
| AAACATCTGCATTATGCTGC+TGG | - | Chr1:68110948-68110967 | None:intergenic | 40.0% | |
| AACATCTGCATTATGCTGCT+GGG | - | Chr1:68110947-68110966 | None:intergenic | 40.0% | |
| AAGAAAGGATCCCATTCATG+AGG | - | Chr1:68111439-68111458 | None:intergenic | 40.0% | |
| AATAAGAGTGATCCTTGTGG+GGG | + | Chr1:68110152-68110171 | MsG0180003778.01.T01:CDS | 40.0% | |
| ACTTCATTGAGGAGAACAGT+TGG | + | Chr1:68111374-68111393 | MsG0180003778.01.T01:CDS | 40.0% | |
| AGTGAGAATCATGAGAGAAG+AGG | + | Chr1:68111204-68111223 | MsG0180003778.01.T01:CDS | 40.0% | |
| ATCATGAGAGAAGAGGTCAT+TGG | + | Chr1:68111211-68111230 | MsG0180003778.01.T01:CDS | 40.0% | |
| ATGATTCTCACTTGTTCAGG+AGG | - | Chr1:68111196-68111215 | None:intergenic | 40.0% | |
| ATGGACATATTCTTTGCTGC+CGG | - | Chr1:68110662-68110681 | None:intergenic | 40.0% | |
| ATGTGCATGATCTTCCTTCA+AGG | + | Chr1:68110186-68110205 | MsG0180003778.01.T01:CDS | 40.0% | |
| CATTCCAAAAGCTTACCAAC+CGG | - | Chr1:68110896-68110915 | None:intergenic | 40.0% | |
| CCATTCATTATACTCCACTC+CGG | - | Chr1:68110545-68110564 | None:intergenic | 40.0% | |
| CGGAGTGGAGTATAATGAAT+GGG | + | Chr1:68110543-68110562 | MsG0180003778.01.T01:CDS | 40.0% | |
| CTCATGATTCTCACTTGTTC+AGG | - | Chr1:68111199-68111218 | None:intergenic | 40.0% | |
| CTGACAATGCCAAATCAATC+AGG | + | Chr1:68110840-68110859 | MsG0180003778.01.T01:CDS | 40.0% | |
| GACAATGCCAAATCAATCAG+GGG | + | Chr1:68110842-68110861 | MsG0180003778.01.T01:CDS | 40.0% | |
| GGGTTATAATATCTCGAGGA+GGG | + | Chr1:68110478-68110497 | MsG0180003778.01.T01:CDS | 40.0% | |
| GTATGCGACAAATCAGTTTG+CGG | + | Chr1:68110337-68110356 | MsG0180003778.01.T01:CDS | 40.0% | |
| GTATTCTGTCTTCATTCCAG+AGG | + | Chr1:68111120-68111139 | MsG0180003778.01.T01:CDS | 40.0% | |
| GTGGAGTATAATGAATGGGA+AGG | + | Chr1:68110547-68110566 | MsG0180003778.01.T01:CDS | 40.0% | |
| TAACTGACCCCTGATTGATT+TGG | - | Chr1:68110852-68110871 | None:intergenic | 40.0% | |
| TCCCTGACCAAATGGAAAAA+GGG | + | Chr1:68109742-68109761 | MsG0180003778.01.T01:CDS | 40.0% | |
| TGAGCAATGTAGAAGTTCTC+CGG | + | Chr1:68110874-68110893 | MsG0180003778.01.T01:CDS | 40.0% | |
| TTCTTTATCACAACAGGGTC+AGG | - | Chr1:68110023-68110042 | None:intergenic | 40.0% | |
| ! | AACACATCAGCATCTTTTGC+AGG | - | Chr1:68110752-68110771 | None:intergenic | 40.0% |
| ! | AAGTGGCTTTTCTCATTTGC+TGG | + | Chr1:68110806-68110825 | MsG0180003778.01.T01:CDS | 40.0% |
| ! | ACACATCAGCATCTTTTGCA+GGG | - | Chr1:68110751-68110770 | None:intergenic | 40.0% |
| ! | AGGATCATTTTCTTGTTGCG+GGG | + | Chr1:68110567-68110586 | MsG0180003778.01.T01:CDS | 40.0% |
| ! | CCGTGGAATGCAAATGATTT+TGG | + | Chr1:68110701-68110720 | MsG0180003778.01.T01:CDS | 40.0% |
| ! | GAATGTTGAAGGGGTTTTCT+CGG | + | Chr1:68110304-68110323 | MsG0180003778.01.T01:CDS | 40.0% |
| ! | TAAGAGGAACATGAGTATCG+AGG | + | Chr1:68111153-68111172 | MsG0180003778.01.T01:CDS | 40.0% |
| ! | TCAGGAAACCCAATTTTCCT+CGG | - | Chr1:68110005-68110024 | None:intergenic | 40.0% |
| ! | TTGATCCCCCTTTTTCCATT+TGG | - | Chr1:68109752-68109771 | None:intergenic | 40.0% |
| ! | TTTACTACCAATGCTGGTCT+TGG | + | Chr1:68110269-68110288 | MsG0180003778.01.T01:CDS | 40.0% |
| !! | CTGATTGATTTGGCATTGTC+AGG | - | Chr1:68110842-68110861 | None:intergenic | 40.0% |
| !! | TTACTACCAATGCTGGTCTT+GGG | + | Chr1:68110270-68110289 | MsG0180003778.01.T01:CDS | 40.0% |
| !! | TTGATTTGGCATTGTCAGGA+CGG | - | Chr1:68110838-68110857 | None:intergenic | 40.0% |
| ACAGAATGAGGCGATTAGAG+AGG | + | Chr1:68110783-68110802 | MsG0180003778.01.T01:CDS | 45.0% | |
| ACCCCTTCAACATTCTCAAG+CGG | - | Chr1:68110299-68110318 | None:intergenic | 45.0% | |
| AGAGTTTCTAACTTGGAGCG+AGG | - | Chr1:68111265-68111284 | None:intergenic | 45.0% | |
| AGCTTCAGCAGATGAATCAG+TGG | - | Chr1:68111494-68111513 | None:intergenic | 45.0% | |
| AGGGTGATTCATACACTCGA+AGG | + | Chr1:68110996-68111015 | MsG0180003778.01.T01:CDS | 45.0% | |
| ATAAGAGTGATCCTTGTGGG+GGG | + | Chr1:68110153-68110172 | MsG0180003778.01.T01:CDS | 45.0% | |
| ATACCTGTCTTCTTCCATCC+AGG | + | Chr1:68111049-68111068 | MsG0180003778.01.T01:CDS | 45.0% | |
| CAATGTAGAAGTTCTCCGGT+TGG | + | Chr1:68110878-68110897 | MsG0180003778.01.T01:CDS | 45.0% | |
| CAGAGGATGACATTCGTAAG+AGG | + | Chr1:68111137-68111156 | MsG0180003778.01.T01:CDS | 45.0% | |
| CCCTGACCAAATGGAAAAAG+GGG | + | Chr1:68109743-68109762 | MsG0180003778.01.T01:CDS | 45.0% | |
| CCGGAGTGGAGTATAATGAA+TGG | + | Chr1:68110542-68110561 | MsG0180003778.01.T01:CDS | 45.0% | |
| CCTGACCAAATGGAAAAAGG+GGG | + | Chr1:68109744-68109763 | MsG0180003778.01.T01:CDS | 45.0% | |
| CGGCATACACACAGTATACT+TGG | + | Chr1:68111074-68111093 | MsG0180003778.01.T01:CDS | 45.0% | |
| CTCCCTGACCAAATGGAAAA+AGG | + | Chr1:68109741-68109760 | MsG0180003778.01.T01:CDS | 45.0% | |
| CTCTTACGAATGTCATCCTC+TGG | - | Chr1:68111139-68111158 | None:intergenic | 45.0% | |
| GAGTTTCTAACTTGGAGCGA+GGG | - | Chr1:68111264-68111283 | None:intergenic | 45.0% | |
| GGGGTTATAATATCTCGAGG+AGG | + | Chr1:68110477-68110496 | MsG0180003778.01.T01:CDS | 45.0% | |
| GGTTGCGATGATTTAACTCG+AGG | - | Chr1:68109978-68109997 | None:intergenic | 45.0% | |
| GTCTGAGGAAGAAACAGACT+GGG | + | Chr1:68110616-68110635 | MsG0180003778.01.T01:CDS | 45.0% | |
| GTCTGCCTTTGATTCCATGT+TGG | + | Chr1:68111018-68111037 | MsG0180003778.01.T01:CDS | 45.0% | |
| TAAATATACCTCCCCCCACA+AGG | - | Chr1:68110167-68110186 | None:intergenic | 45.0% | |
| TAATATCTCGAGGAGGGATG+CGG | + | Chr1:68110484-68110503 | MsG0180003778.01.T01:CDS | 45.0% | |
| TCAATTGGCAGGACAGAATG+AGG | + | Chr1:68110771-68110790 | MsG0180003778.01.T01:CDS | 45.0% | |
| TCTGAGGAAGAAACAGACTG+GGG | + | Chr1:68110617-68110636 | MsG0180003778.01.T01:CDS | 45.0% | |
| TGCTGATGTGTTCAATTGGC+AGG | + | Chr1:68110760-68110779 | MsG0180003778.01.T01:CDS | 45.0% | |
| TGTCACTCTTTACCGCAACA+GGG | - | Chr1:68110058-68110077 | None:intergenic | 45.0% | |
| TGTCTGAGGAAGAAACAGAC+TGG | + | Chr1:68110615-68110634 | MsG0180003778.01.T01:CDS | 45.0% | |
| TGTCTTCTTCCATCCAGGTT+CGG | + | Chr1:68111054-68111073 | MsG0180003778.01.T01:CDS | 45.0% | |
| ! | ATCATTTTCTTGTTGCGGGG+AGG | + | Chr1:68110570-68110589 | MsG0180003778.01.T01:CDS | 45.0% |
| ! | CCCCTTTTTCCATTTGGTCA+GGG | - | Chr1:68109746-68109765 | None:intergenic | 45.0% |
| ! | GGAGGATAACGTGGGATTTT+CGG | + | Chr1:68110588-68110607 | MsG0180003778.01.T01:CDS | 45.0% |
| ! | GGATTTTCGGAGATTGTCTG+AGG | + | Chr1:68110601-68110620 | MsG0180003778.01.T01:CDS | 45.0% |
| ! | GGGTCAGCATATACTAGTCT+TGG | - | Chr1:68111244-68111263 | None:intergenic | 45.0% |
| ! | GGGTGGAAGTATGTAGGATA+AGG | - | Chr1:68110731-68110750 | None:intergenic | 45.0% |
| ! | TGAAGGGGTTTTCTCGGATA+CGG | + | Chr1:68110310-68110329 | MsG0180003778.01.T01:CDS | 45.0% |
| ! | TGATTTGGCATTGTCAGGAC+GGG | - | Chr1:68110837-68110856 | None:intergenic | 45.0% |
| ! | TTTGCAGGGTGGAAGTATGT+AGG | - | Chr1:68110737-68110756 | None:intergenic | 45.0% |
| !! | TGGTTGACTGGCTTATGAAG+AGG | + | Chr1:68110519-68110538 | MsG0180003778.01.T01:CDS | 45.0% |
| !!! | TTCTCCGGTTGGTAAGCTTT+TGG | + | Chr1:68110889-68110908 | MsG0180003778.01.T01:CDS | 45.0% |
| AACCGCCTCCGAGGAAAATT+GGG | + | Chr1:68109994-68110013 | MsG0180003778.01.T01:CDS | 50.0% | |
| ACAGTTCTGCTTGCAACCTC+AGG | + | Chr1:68110976-68110995 | MsG0180003778.01.T01:CDS | 50.0% | |
| ACTCGACTCTACCACAAGCA+TGG | - | Chr1:68110681-68110700 | None:intergenic | 50.0% | |
| AGGTATACAGCCAGCCAACA+TGG | - | Chr1:68111035-68111054 | None:intergenic | 50.0% | |
| CAGTTCTGCTTGCAACCTCA+GGG | + | Chr1:68110977-68110996 | MsG0180003778.01.T01:CDS | 50.0% | |
| CCTTCAACATTCTCAAGCGG+CGG | - | Chr1:68110296-68110315 | None:intergenic | 50.0% | |
| CCTTCTTCTCCTCCTTCTCA+GGG | - | Chr1:68110088-68110107 | None:intergenic | 50.0% | |
| CGAGTGTATGAATCACCCTG+AGG | - | Chr1:68110995-68111014 | None:intergenic | 50.0% | |
| CGCCGCTTGAGAATGTTGAA+GGG | + | Chr1:68110294-68110313 | MsG0180003778.01.T01:CDS | 50.0% | |
| CTGAGGAAGAAACAGACTGG+GGG | + | Chr1:68110618-68110637 | MsG0180003778.01.T01:CDS | 50.0% | |
| CTTCGCTTGATCTGGTTGAC+TGG | + | Chr1:68110507-68110526 | MsG0180003778.01.T01:CDS | 50.0% | |
| GAACCTGGATGGAAGAAGAC+AGG | - | Chr1:68111055-68111074 | None:intergenic | 50.0% | |
| GATGAGGGAAAACACGAGGT+TGG | + | Chr1:68111412-68111431 | MsG0180003778.01.T01:CDS | 50.0% | |
| GATTTGGCATTGTCAGGACG+GGG | - | Chr1:68110836-68110855 | None:intergenic | 50.0% | |
| GCAGTATGAGTGCTTGACTG+AGG | + | Chr1:68110388-68110407 | MsG0180003778.01.T01:CDS | 50.0% | |
| GCCAGCCAACATGGAATCAA+AGG | - | Chr1:68111026-68111045 | None:intergenic | 50.0% | |
| GCCGCTTGAGAATGTTGAAG+GGG | + | Chr1:68110295-68110314 | MsG0180003778.01.T01:CDS | 50.0% | |
| GCCTTTGATTCCATGTTGGC+TGG | + | Chr1:68111022-68111041 | MsG0180003778.01.T01:CDS | 50.0% | |
| GTTGGATGAGGGAAAACACG+AGG | + | Chr1:68111408-68111427 | MsG0180003778.01.T01:CDS | 50.0% | |
| TACTGTGTGTATGCCGAACC+TGG | - | Chr1:68111070-68111089 | None:intergenic | 50.0% | |
| TCCTTCTTCTCCTCCTTCTC+AGG | - | Chr1:68110089-68110108 | None:intergenic | 50.0% | |
| TCTTTACCGCAACAGGGTCA+GGG | - | Chr1:68110052-68110071 | None:intergenic | 50.0% | |
| TGAGAAGGAGGAGAAGAAGG+AGG | + | Chr1:68110088-68110107 | MsG0180003778.01.T01:CDS | 50.0% | |
| TGAGGCGATTAGAGAGGAAG+TGG | + | Chr1:68110789-68110808 | MsG0180003778.01.T01:CDS | 50.0% | |
| ! | AACCCAATTTTCCTCGGAGG+CGG | - | Chr1:68109999-68110018 | None:intergenic | 50.0% |
| ! | ACGAGGTTGGTCCTCATGAA+TGG | + | Chr1:68111425-68111444 | MsG0180003778.01.T01:CDS | 50.0% |
| ! | CATCAGCATCTTTTGCAGGG+TGG | - | Chr1:68110748-68110767 | None:intergenic | 50.0% |
| ! | CCCCCTTTTTCCATTTGGTC+AGG | - | Chr1:68109747-68109766 | None:intergenic | 50.0% |
| ! | CGAGGTTGGTCCTCATGAAT+GGG | + | Chr1:68111426-68111445 | MsG0180003778.01.T01:CDS | 50.0% |
| ! | GAAGGGGTTTTCTCGGATAC+GGG | + | Chr1:68110311-68110330 | MsG0180003778.01.T01:CDS | 50.0% |
| ! | GGAAACCCAATTTTCCTCGG+AGG | - | Chr1:68110002-68110021 | None:intergenic | 50.0% |
| ! | GTGTCACTCTTTACCGCAAC+AGG | - | Chr1:68110059-68110078 | None:intergenic | 50.0% |
| !! | TGACTGGCTTATGAAGAGGC+CGG | + | Chr1:68110523-68110542 | MsG0180003778.01.T01:CDS | 50.0% |
| CAACCGCCTCCGAGGAAAAT+TGG | + | Chr1:68109993-68110012 | MsG0180003778.01.T01:CDS | 55.0% | |
| CCCTGAGAAGGAGGAGAAGA+AGG | + | Chr1:68110085-68110104 | MsG0180003778.01.T01:CDS | 55.0% | |
| CCGCCGCTTGAGAATGTTGA+AGG | + | Chr1:68110293-68110312 | MsG0180003778.01.T01:CDS | 55.0% | |
| CTCTTTACCGCAACAGGGTC+AGG | - | Chr1:68110053-68110072 | None:intergenic | 55.0% | |
| CTTTACCGCAACAGGGTCAG+GGG | - | Chr1:68110051-68110070 | None:intergenic | 55.0% | |
| GTGTGTATGCCGAACCTGGA+TGG | - | Chr1:68111066-68111085 | None:intergenic | 55.0% | |
| TCTCCTCCTTCTCAGGGACA+GGG | - | Chr1:68110082-68110101 | None:intergenic | 55.0% | |
| TGTTGCGGGGAGGATAACGT+GGG | + | Chr1:68110580-68110599 | MsG0180003778.01.T01:CDS | 55.0% | |
| TTCTCCTCCTTCTCAGGGAC+AGG | - | Chr1:68110083-68110102 | None:intergenic | 55.0% | |
| TTGTGGTAGAGTCGAGTCCG+TGG | + | Chr1:68110684-68110703 | MsG0180003778.01.T01:CDS | 55.0% | |
| TTGTTGCGGGGAGGATAACG+TGG | + | Chr1:68110579-68110598 | MsG0180003778.01.T01:CDS | 55.0% | |
| ! | GGGTTTTCTCGGATACGGGT+TGG | + | Chr1:68110315-68110334 | MsG0180003778.01.T01:CDS | 55.0% |
| AATCATCGCAACCGCCTCCG+AGG | + | Chr1:68109985-68110004 | MsG0180003778.01.T01:CDS | 60.0% | |
| AGAGTGATCCTTGTGGGGGG+AGG | + | Chr1:68110156-68110175 | MsG0180003778.01.T01:CDS | 60.0% | |
| CTCCTCCTTCTCAGGGACAG+GGG | - | Chr1:68110081-68110100 | None:intergenic | 60.0% | |
| GGATGCGGCTTCGCTTGATC+TGG | + | Chr1:68110499-68110518 | MsG0180003778.01.T01:CDS | 60.0% | |
| GGCTTATGAAGAGGCCGGAG+TGG | + | Chr1:68110528-68110547 | MsG0180003778.01.T01:CDS | 60.0% | |
| GGGCGTTCTCCCTGACCAAA+TGG | + | Chr1:68109734-68109753 | MsG0180003778.01.T01:CDS | 60.0% | |
| TGACACCCCTGACCCTGTTG+CGG | + | Chr1:68110043-68110062 | MsG0180003778.01.T01:CDS | 60.0% | |
| TGACACCCCTGTCCCTGAGA+AGG | + | Chr1:68110073-68110092 | MsG0180003778.01.T01:CDS | 60.0% | |
| CACCCCTGTCCCTGAGAAGG+AGG | + | Chr1:68110076-68110095 | MsG0180003778.01.T01:CDS | 65.0% | |
| ATGAGACGGCGCCCTGTGGC+GGG | + | Chr1:68109714-68109733 | MsG0180003778.01.T01:CDS | 70.0% | |
| CAGGGAGAACGCCCGCCACA+GGG | - | Chr1:68109728-68109747 | None:intergenic | 70.0% | |
| CGGCGGCCCAAGACCAGCAT+TGG | - | Chr1:68110279-68110298 | None:intergenic | 70.0% | |
| TCAGGGAGAACGCCCGCCAC+AGG | - | Chr1:68109729-68109748 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 68109714 | 68111555 | 68109714 | ID=MsG0180003778.01;Name=MsG0180003778.01 |
| Chr1 | mRNA | 68109714 | 68111555 | 68109714 | ID=MsG0180003778.01.T01;Parent=MsG0180003778.01;Name=MsG0180003778.01.T01;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|613 |
| Chr1 | exon | 68109714 | 68111555 | 68109714 | ID=MsG0180003778.01.T01:exon:51790;Parent=MsG0180003778.01.T01 |
| Chr1 | CDS | 68109714 | 68111555 | 68109714 | ID=MsG0180003778.01.T01:cds;Parent=MsG0180003778.01.T01 |
| Gene Sequence |
| Protein sequence |
