Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009108.01.T01 | KEH37969.1 | 99.609 | 511 | 2 | 0 | 1 | 511 | 1 | 511 | 0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009108.01.T01 | O48780 | 82.711 | 509 | 87 | 1 | 3 | 511 | 2 | 509 | 0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009108.01.T01 | A0A072V7F7 | 99.609 | 511 | 2 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1059 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000245.01 | MsG0280009108.01 | 0.833060 | 6.623276e-56 | 7.542363e-53 |
| MsG0180003778.01 | MsG0280009108.01 | 0.813927 | 1.998100e-51 | 1.322199e-48 |
| MsG0180004714.01 | MsG0280009108.01 | -0.811394 | 7.157358e-51 | 4.425281e-48 |
| MsG0180004792.01 | MsG0280009108.01 | -0.827563 | 1.460292e-54 | 1.414807e-51 |
| MsG0180005199.01 | MsG0280009108.01 | 0.800688 | 1.281376e-48 | 6.004323e-46 |
| MsG0280006950.01 | MsG0280009108.01 | 0.802714 | 4.921887e-49 | 2.428011e-46 |
| MsG0280007598.01 | MsG0280009108.01 | 0.829880 | 4.018259e-55 | 4.166308e-52 |
| MsG0280007923.01 | MsG0280009108.01 | 0.878839 | 2.029141e-69 | 1.075246e-65 |
| MsG0280008854.01 | MsG0280009108.01 | 0.808399 | 3.157263e-50 | 1.803449e-47 |
| MsG0280009108.01 | MsG0280009139.01 | 0.954258 | 4.434534e-112 | 1.234528e-106 |
| MsG0280009108.01 | MsG0280010963.01 | 0.801569 | 8.465048e-49 | 4.055904e-46 |
| MsG0280009108.01 | MsG0380012697.01 | 0.814668 | 1.369971e-51 | 9.249479e-49 |
| MsG0280009108.01 | MsG0380015561.01 | 0.810552 | 1.089382e-50 | 6.586447e-48 |
| MsG0280009108.01 | MsG0380015862.01 | 0.825311 | 5.023933e-54 | 4.562704e-51 |
| MsG0280009108.01 | MsG0380016156.01 | 0.861005 | 1.389887e-63 | 3.873885e-60 |
| MsG0280009108.01 | MsG0380016567.01 | 0.816574 | 5.155612e-52 | 3.666778e-49 |
| MsG0280009108.01 | MsG0380017212.01 | 0.831384 | 1.721217e-55 | 1.864863e-52 |
| MsG0280009108.01 | MsG0380017411.01 | 0.805119 | 1.556752e-49 | 8.168983e-47 |
| MsG0280009108.01 | MsG0380017650.01 | 0.826642 | 2.425267e-54 | 2.287708e-51 |
| MsG0280009108.01 | MsG0380017660.01 | 0.845263 | 4.528780e-59 | 7.505251e-56 |
| MsG0280009108.01 | MsG0480019906.01 | 0.851390 | 9.154371e-61 | 1.850146e-57 |
| MsG0280009108.01 | MsG0480021753.01 | 0.847807 | 9.151004e-60 | 1.645764e-56 |
| MsG0280009108.01 | MsG0480021859.01 | 0.891969 | 2.443788e-74 | 2.188925e-70 |
| MsG0280009108.01 | MsG0480022154.01 | -0.807874 | 4.083937e-50 | 2.300556e-47 |
| MsG0280009108.01 | MsG0480022592.01 | 0.871762 | 5.336073e-67 | 2.177907e-63 |
| MsG0280009108.01 | MsG0480023987.01 | 0.887425 | 1.443674e-72 | 1.073162e-68 |
| MsG0280009108.01 | MsG0580024079.01 | 0.814278 | 1.671139e-51 | 1.116496e-48 |
| MsG0280009108.01 | MsG0580025071.01 | 0.854482 | 1.195054e-61 | 2.672777e-58 |
| MsG0280009108.01 | MsG0580025441.01 | 0.872953 | 2.138670e-67 | 9.118099e-64 |
| MsG0280009108.01 | MsG0580030171.01 | 0.813434 | 2.564598e-51 | 1.674638e-48 |
| MsG0280009108.01 | MsG0680032416.01 | -0.835389 | 1.726856e-56 | 2.108640e-53 |
| MsG0280009108.01 | MsG0780036793.01 | 0.814801 | 1.280604e-51 | 8.677176e-49 |
| MsG0280009108.01 | MsG0780039440.01 | 0.815711 | 8.036149e-52 | 5.582339e-49 |
| MsG0280009108.01 | MsG0780039837.01 | 0.801926 | 7.148556e-49 | 3.456341e-46 |
| MsG0280009108.01 | MsG0780040119.01 | 0.849412 | 3.288483e-60 | 6.228411e-57 |
| MsG0280009108.01 | MsG0780040560.01 | 0.825260 | 5.165026e-54 | 4.684161e-51 |
| MsG0280009108.01 | MsG0780040598.01 | 0.811874 | 5.626770e-51 | 3.523362e-48 |
| MsG0280009108.01 | MsG0780041180.01 | 0.821294 | 4.357685e-53 | 3.531009e-50 |
| MsG0280009108.01 | MsG0780041250.01 | 0.800963 | 1.126215e-48 | 5.314528e-46 |
| MsG0280009108.01 | MsG0780041443.01 | 0.821403 | 4.113999e-53 | 3.343638e-50 |
| MsG0280009108.01 | MsG0880042849.01 | 0.842850 | 2.009977e-58 | 3.086878e-55 |
| MsG0280009108.01 | MsG0880043056.01 | -0.836629 | 8.364667e-57 | 1.060113e-53 |
| MsG0280009108.01 | MsG0880045477.01 | 0.808127 | 3.607600e-50 | 2.045955e-47 |
| MsG0280009108.01 | MsG0880047123.01 | 0.817147 | 3.834202e-52 | 2.770078e-49 |
| MsG0280009108.01 | MsG0880047494.01 | 0.850244 | 1.925096e-60 | 3.747278e-57 |
| MsG0280009108.01 | MsG0880047554.01 | 0.833043 | 6.690514e-56 | 7.614862e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0280009108.01 | MsG0180004168.01 | PPI |
| MsG0280009108.01 | MsG0180001685.01 | PPI |
| MsG0280009108.01 | MsG0180004283.01 | PPI |
| MsG0180004283.01 | MsG0280009108.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009108.01.T01 | MTR_2g054940 | 99.609 | 511 | 2 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1059 |
| MsG0280009108.01.T01 | MTR_7g081695 | 96.040 | 505 | 8 | 1 | 1 | 505 | 1 | 493 | 0.0 | 994 |
| MsG0280009108.01.T01 | MTR_4g113280 | 87.550 | 498 | 51 | 1 | 14 | 511 | 3 | 489 | 0.0 | 911 |
| MsG0280009108.01.T01 | MTR_1g076430 | 75.889 | 506 | 122 | 0 | 6 | 511 | 7 | 512 | 0.0 | 826 |
| MsG0280009108.01.T01 | MTR_1g041085 | 77.485 | 493 | 111 | 0 | 19 | 511 | 26 | 518 | 0.0 | 816 |
| MsG0280009108.01.T01 | MTR_4g070270 | 68.635 | 491 | 153 | 1 | 15 | 505 | 13 | 502 | 0.0 | 713 |
| MsG0280009108.01.T01 | MTR_7g118170 | 65.737 | 502 | 157 | 6 | 17 | 506 | 31 | 529 | 0.0 | 668 |
| MsG0280009108.01.T01 | MTR_1g110930 | 63.136 | 491 | 180 | 1 | 18 | 508 | 4 | 493 | 0.0 | 639 |
| MsG0280009108.01.T01 | MTR_3g105550 | 58.084 | 501 | 198 | 4 | 17 | 505 | 36 | 536 | 0.0 | 627 |
| MsG0280009108.01.T01 | MTR_5g056510 | 60.081 | 491 | 195 | 1 | 18 | 508 | 4 | 493 | 0.0 | 617 |
| MsG0280009108.01.T01 | MTR_6g074880 | 60.917 | 458 | 173 | 2 | 56 | 507 | 13 | 470 | 0.0 | 578 |
| MsG0280009108.01.T01 | MTR_4g054630 | 59.477 | 459 | 179 | 3 | 53 | 505 | 9 | 466 | 0.0 | 567 |
| MsG0280009108.01.T01 | MTR_4g054415 | 62.919 | 418 | 154 | 1 | 89 | 505 | 8 | 425 | 0.0 | 560 |
| MsG0280009108.01.T01 | MTR_6g032965 | 61.818 | 385 | 147 | 0 | 122 | 506 | 1 | 385 | 0.0 | 514 |
| MsG0280009108.01.T01 | MTR_2g013740 | 53.734 | 482 | 209 | 5 | 19 | 497 | 33 | 503 | 9.70e-172 | 494 |
| MsG0280009108.01.T01 | MTR_7g118160 | 55.198 | 404 | 137 | 3 | 102 | 503 | 56 | 417 | 8.16e-160 | 461 |
| MsG0280009108.01.T01 | MTR_2g436480 | 49.890 | 455 | 210 | 7 | 63 | 505 | 3 | 451 | 1.60e-157 | 456 |
| MsG0280009108.01.T01 | MTR_2g007020 | 52.683 | 410 | 191 | 3 | 98 | 506 | 45 | 452 | 6.96e-157 | 454 |
| MsG0280009108.01.T01 | MTR_1g102290 | 47.059 | 408 | 215 | 1 | 97 | 503 | 77 | 484 | 6.85e-136 | 402 |
| MsG0280009108.01.T01 | MTR_3g072940 | 46.472 | 411 | 218 | 2 | 94 | 503 | 74 | 483 | 5.15e-131 | 389 |
| MsG0280009108.01.T01 | MTR_3g072980 | 46.472 | 411 | 218 | 2 | 94 | 503 | 74 | 483 | 5.38e-131 | 389 |
| MsG0280009108.01.T01 | MTR_6g051440 | 46.287 | 404 | 215 | 2 | 101 | 503 | 80 | 482 | 2.56e-120 | 362 |
| MsG0280009108.01.T01 | MTR_1g115560 | 39.954 | 433 | 227 | 7 | 98 | 504 | 28 | 453 | 3.47e-109 | 333 |
| MsG0280009108.01.T01 | MTR_4g062270 | 39.817 | 437 | 245 | 6 | 76 | 502 | 5 | 433 | 4.82e-107 | 327 |
| MsG0280009108.01.T01 | MTR_4g062190 | 38.170 | 448 | 250 | 5 | 72 | 502 | 5 | 442 | 4.85e-106 | 325 |
| MsG0280009108.01.T01 | MTR_2g096210 | 39.813 | 427 | 226 | 6 | 98 | 502 | 27 | 444 | 9.40e-105 | 322 |
| MsG0280009108.01.T01 | MTR_4g062170 | 38.514 | 444 | 253 | 5 | 72 | 502 | 5 | 441 | 1.57e-102 | 316 |
| MsG0280009108.01.T01 | MTR_4g054260 | 58.203 | 256 | 89 | 2 | 251 | 505 | 87 | 325 | 8.76e-100 | 304 |
| MsG0280009108.01.T01 | MTR_4g053905 | 67.296 | 159 | 52 | 0 | 347 | 505 | 1 | 159 | 7.77e-74 | 231 |
| MsG0280009108.01.T01 | MTR_4g054265 | 50.893 | 112 | 55 | 0 | 87 | 198 | 6 | 117 | 3.56e-34 | 125 |
| MsG0280009108.01.T01 | MTR_7g086260 | 59.615 | 52 | 21 | 0 | 345 | 396 | 25 | 76 | 1.22e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009108.01.T01 | AT2G26640 | 82.711 | 509 | 87 | 1 | 3 | 511 | 2 | 509 | 0.0 | 900 |
| MsG0280009108.01.T01 | AT1G04220 | 72.079 | 505 | 132 | 5 | 15 | 511 | 18 | 521 | 0.0 | 763 |
| MsG0280009108.01.T01 | AT5G43760 | 74.239 | 493 | 121 | 3 | 25 | 511 | 34 | 526 | 0.0 | 735 |
| MsG0280009108.01.T01 | AT1G19440 | 68.712 | 489 | 152 | 1 | 15 | 503 | 25 | 512 | 0.0 | 715 |
| MsG0280009108.01.T01 | AT2G16280 | 67.894 | 489 | 156 | 1 | 17 | 505 | 23 | 510 | 0.0 | 705 |
| MsG0280009108.01.T01 | AT1G01120 | 62.828 | 495 | 178 | 3 | 17 | 505 | 32 | 526 | 0.0 | 660 |
| MsG0280009108.01.T01 | AT1G68530 | 61.837 | 490 | 186 | 1 | 19 | 508 | 6 | 494 | 0.0 | 644 |
| MsG0280009108.01.T01 | AT4G34510 | 63.522 | 477 | 167 | 3 | 30 | 505 | 15 | 485 | 0.0 | 639 |
| MsG0280009108.01.T01 | AT1G25450 | 61.224 | 490 | 189 | 1 | 19 | 508 | 1 | 489 | 0.0 | 629 |
| MsG0280009108.01.T01 | AT2G26250 | 55.238 | 525 | 202 | 5 | 8 | 503 | 28 | 548 | 0.0 | 601 |
| MsG0280009108.01.T01 | AT4G34250 | 57.851 | 484 | 197 | 3 | 28 | 505 | 5 | 487 | 0.0 | 573 |
| MsG0280009108.01.T01 | AT4G34520 | 58.025 | 486 | 192 | 3 | 31 | 505 | 6 | 490 | 0.0 | 573 |
| MsG0280009108.01.T01 | AT2G15090 | 58.511 | 470 | 184 | 5 | 45 | 505 | 12 | 479 | 0.0 | 558 |
| MsG0280009108.01.T01 | AT2G46720 | 60.142 | 424 | 164 | 2 | 87 | 505 | 42 | 465 | 0.0 | 553 |
| MsG0280009108.01.T01 | AT3G10280 | 58.962 | 424 | 162 | 3 | 87 | 505 | 42 | 458 | 0.0 | 533 |
| MsG0280009108.01.T01 | AT1G71160 | 50.943 | 424 | 204 | 4 | 82 | 503 | 25 | 446 | 1.16e-158 | 459 |
| MsG0280009108.01.T01 | AT1G68530 | 57.849 | 344 | 145 | 0 | 19 | 362 | 6 | 349 | 1.45e-145 | 422 |
| MsG0280009108.01.T01 | AT5G49070 | 49.412 | 425 | 207 | 4 | 87 | 506 | 35 | 456 | 6.10e-145 | 424 |
| MsG0280009108.01.T01 | AT3G52160 | 44.969 | 487 | 197 | 5 | 20 | 494 | 22 | 449 | 1.35e-141 | 415 |
| MsG0280009108.01.T01 | AT3G52160 | 50.959 | 365 | 148 | 2 | 130 | 494 | 3 | 336 | 5.96e-131 | 384 |
| MsG0280009108.01.T01 | AT5G04530 | 39.810 | 422 | 243 | 5 | 89 | 502 | 19 | 437 | 3.77e-107 | 328 |
| MsG0280009108.01.T01 | AT2G28630 | 40.515 | 427 | 225 | 7 | 98 | 502 | 27 | 446 | 9.10e-107 | 327 |
| MsG0280009108.01.T01 | AT2G28630 | 40.515 | 427 | 225 | 7 | 98 | 502 | 27 | 446 | 9.10e-107 | 327 |
| MsG0280009108.01.T01 | AT1G07720 | 40.758 | 422 | 232 | 4 | 98 | 502 | 27 | 447 | 1.14e-105 | 324 |
| MsG0280009108.01.T01 | AT1G07720 | 40.758 | 422 | 232 | 4 | 98 | 502 | 70 | 490 | 1.90e-105 | 325 |
| MsG0280009108.01.T01 | AT5G49070 | 44.444 | 279 | 154 | 1 | 87 | 364 | 35 | 313 | 5.41e-80 | 253 |
| MsG0280009108.01.T01 | AT4G34850 | 25.483 | 259 | 149 | 10 | 236 | 482 | 91 | 317 | 2.64e-12 | 68.2 |
| MsG0280009108.01.T01 | AT4G34850 | 25.483 | 259 | 149 | 10 | 236 | 482 | 164 | 390 | 5.47e-12 | 68.2 |
Find 134 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGATATCTATGATATC+TGG | 0.226248 | 2:+45490717 | MsG0280009108.01.T01:CDS |
| ATGCACTAAGAGGATATTTA+TGG | 0.261715 | 2:+45490880 | MsG0280009108.01.T01:CDS |
| TACTTTATCAAAAGATCTTA+TGG | 0.267099 | 2:+45491549 | MsG0280009108.01.T01:CDS |
| AGAATGACACTTTATCGTTT+TGG | 0.268393 | 2:+45491817 | MsG0280009108.01.T01:CDS |
| GGTGGGATGGGATGCAGTGC+TGG | 0.280642 | 2:+45491229 | MsG0280009108.01.T01:CDS |
| CTGCAATTCTACTTTCTAAC+AGG | 0.282789 | 2:+45491404 | MsG0280009108.01.T01:CDS |
| CGATGAGATCCACCAGTTTC+CGG | 0.286351 | 2:+45492014 | MsG0280009108.01.T01:CDS |
| TTCCTAGCTTCTTTCATTGA+AGG | 0.317480 | 2:-45491028 | None:intergenic |
| ATTTAGATGGCAGAAATTCT+TGG | 0.321018 | 2:-45492045 | None:intergenic |
| ATCAGAATTCCAATGTCTTT+AGG | 0.328553 | 2:-45491112 | None:intergenic |
| AGCTTGAAATCCGGAATATA+AGG | 0.330746 | 2:-45491697 | None:intergenic |
| GGTGTGGACCAATTGGTATT+TGG | 0.335798 | 2:-45491446 | None:intergenic |
| TGGCAAATAGCATTTGGTTC+TGG | 0.340846 | 2:+45491919 | MsG0280009108.01.T01:CDS |
| AAAACAAACATTACCACGTT+GGG | 0.342115 | 2:+45491592 | MsG0280009108.01.T01:CDS |
| GTGCATTTGCGAGACTCTTC+CGG | 0.354359 | 2:-45490863 | None:intergenic |
| TCCTTTCTTGATCCTTCCCT+TGG | 0.368172 | 2:-45491887 | None:intergenic |
| AAAGATCTTATGGCCGTTGC+AGG | 0.375775 | 2:+45491559 | MsG0280009108.01.T01:CDS |
| TTCGAATTGTTTGTTCCGTA+TGG | 0.380907 | 2:+45491375 | MsG0280009108.01.T01:CDS |
| AGCTTCTTTCATTGAAGGAT+TGG | 0.386247 | 2:-45491023 | None:intergenic |
| TTTAAACTACATCATTTAGA+TGG | 0.399579 | 2:-45492058 | None:intergenic |
| ACAACCAACGCATACGAGTT+AGG | 0.410167 | 2:-45491295 | None:intergenic |
| AAGCTTGGATCGATCGTTCC+CGG | 0.410332 | 2:-45491350 | None:intergenic |
| AGGACGAGTCATAAAGTAAA+AGG | 0.410912 | 2:-45490804 | None:intergenic |
| GCTTCTTTCATTGAAGGATT+GGG | 0.411634 | 2:-45491022 | None:intergenic |
| TTGGAACATCGACCGGAAAC+TGG | 0.414672 | 2:-45492026 | None:intergenic |
| GAAGATAAAGCCTTATATTC+CGG | 0.417524 | 2:+45491687 | MsG0280009108.01.T01:CDS |
| GCGCAGTATGGAAGGCTCTA+AGG | 0.417809 | 2:+45491956 | MsG0280009108.01.T01:CDS |
| AGAACATGGCAAATAGCATT+TGG | 0.419756 | 2:+45491913 | MsG0280009108.01.T01:CDS |
| GAAGCGGAGGCAGTTATGTT+TGG | 0.419896 | 2:+45491052 | MsG0280009108.01.T01:CDS |
| TCAAGTGCAACAGCGCAGTA+TGG | 0.422431 | 2:+45491944 | MsG0280009108.01.T01:CDS |
| CGATAAAGTGTCATTCTTGA+CGG | 0.427252 | 2:-45491811 | None:intergenic |
| GGAATGCTTAGAACAGCTTC+TGG | 0.428265 | 2:-45490998 | None:intergenic |
| TGGAGAACATCACGTTGAAT+TGG | 0.436866 | 2:+45491323 | MsG0280009108.01.T01:CDS |
| ATCCTTGAGAGATCTGGTCT+TGG | 0.439851 | 2:+45490959 | MsG0280009108.01.T01:CDS |
| CGAAAGATCCTTGAGAGATC+TGG | 0.441571 | 2:+45490953 | MsG0280009108.01.T01:CDS |
| CTGTTCTTCGCTACGTTGGT+TGG | 0.446813 | 2:+45491646 | MsG0280009108.01.T01:CDS |
| TGCGAACGGTGTGGACCAAT+TGG | 0.448066 | 2:-45491453 | None:intergenic |
| GAAGCTGTCTCCATGGCATA+TGG | 0.449190 | 2:+45491786 | MsG0280009108.01.T01:CDS |
| GGTACATGCCATGAGTGATT+AGG | 0.451469 | 2:-45490640 | None:intergenic |
| CAGTTCGCTTTGGTACGAAT+TGG | 0.452777 | 2:+45491852 | MsG0280009108.01.T01:CDS |
| GTGGGATGGGATGCAGTGCT+GGG | 0.466651 | 2:+45491230 | MsG0280009108.01.T01:CDS |
| CCTCTTTCTTTCACCACTTG+TGG | 0.470663 | 2:+45490661 | MsG0280009108.01.T01:CDS |
| CAATGATATCTATGATATCT+GGG | 0.474517 | 2:+45490718 | MsG0280009108.01.T01:CDS |
| CGACGACGATGGCGCTAACA+AGG | 0.474648 | 2:-45490555 | None:intergenic |
| GAGAAGATCCAAATACCAAT+TGG | 0.476259 | 2:+45491438 | MsG0280009108.01.T01:CDS |
| ACACCTCTAGCAGTTCGCTT+TGG | 0.480585 | 2:+45491842 | MsG0280009108.01.T01:CDS |
| TCGAATTGTTTGTTCCGTAT+GGG | 0.486272 | 2:+45491376 | MsG0280009108.01.T01:CDS |
| ATCTCTCAAGGATCTTTCGT+TGG | 0.488205 | 2:-45490949 | None:intergenic |
| TTTACTTTATGACTCGTCCT+AGG | 0.488605 | 2:+45490807 | MsG0280009108.01.T01:CDS |
| GAAGACGACAATGGCAAAGT+TGG | 0.504336 | 2:+45491523 | MsG0280009108.01.T01:CDS |
| AACATAATGAGTTACAATCT+TGG | 0.513615 | 2:+45491208 | MsG0280009108.01.T01:CDS |
| ATTGTTTGTTCCGTATGGGA+GGG | 0.513671 | 2:+45491380 | MsG0280009108.01.T01:CDS |
| TCAAAAGCTAGCTTGAAATC+CGG | 0.514010 | 2:-45491706 | None:intergenic |
| AGCGAAGAACAGCAACTGTT+CGG | 0.515852 | 2:-45491635 | None:intergenic |
| ATCTAAAACAGCTCTTCCAC+CGG | 0.515874 | 2:-45491746 | None:intergenic |
| GCCAAGGGAAGGATCAAGAA+AGG | 0.516116 | 2:+45491886 | MsG0280009108.01.T01:CDS |
| GAGTTACAATCTTGGTGGGA+TGG | 0.516163 | 2:+45491216 | MsG0280009108.01.T01:CDS |
| GAAATTCTTGGAACATCGAC+CGG | 0.516259 | 2:-45492033 | None:intergenic |
| ATCACGTTGAATTGGTATCC+CGG | 0.518078 | 2:+45491331 | MsG0280009108.01.T01:CDS |
| AGCTTGGATCGATCGTTCCC+GGG | 0.518481 | 2:-45491349 | None:intergenic |
| TTGTTTGTTCCGTATGGGAG+GGG | 0.520242 | 2:+45491381 | MsG0280009108.01.T01:CDS |
| CAAACAATTCGAAACAAGCT+TGG | 0.524897 | 2:-45491365 | None:intergenic |
| CTCCAAGACCAGATCTCTCA+AGG | 0.527098 | 2:-45490961 | None:intergenic |
| GTGCAACAGCGCAGTATGGA+AGG | 0.529765 | 2:+45491948 | MsG0280009108.01.T01:CDS |
| CCACACCGTTCGCACTAACA+AGG | 0.531499 | 2:+45491462 | MsG0280009108.01.T01:CDS |
| CTACAAAAGAGAAGAACCCT+TGG | 0.534529 | 2:+45491989 | MsG0280009108.01.T01:CDS |
| GAGGGCGAGTGGTTTCTTCA+CGG | 0.536357 | 2:+45490910 | MsG0280009108.01.T01:CDS |
| AGTCTCGCAAATGCACTAAG+AGG | 0.536367 | 2:+45490870 | MsG0280009108.01.T01:CDS |
| ATTGCAGAGAGTGACGGAGT+TGG | 0.537030 | 2:-45491157 | None:intergenic |
| AATTGTTTGTTCCGTATGGG+AGG | 0.537893 | 2:+45491379 | MsG0280009108.01.T01:CDS |
| TCTTGCTAAAGAGCTTCTCC+AGG | 0.541294 | 2:+45491267 | MsG0280009108.01.T01:CDS |
| GTATGCGTTGGTTGTTAGCA+TGG | 0.541573 | 2:+45491303 | MsG0280009108.01.T01:CDS |
| GATATCATAGATATCATTGA+GGG | 0.541632 | 2:-45490714 | None:intergenic |
| GCAACTGTTCGGACGTTGGA+AGG | 0.547179 | 2:-45491624 | None:intergenic |
| TTTCAAGGCATCACCTGCAA+CGG | 0.548387 | 2:-45491572 | None:intergenic |
| CCACAAGTGGTGAAAGAAAG+AGG | 0.552043 | 2:-45490661 | None:intergenic |
| TCTACTTTCTAACAGGGGAT+CGG | 0.553751 | 2:+45491411 | MsG0280009108.01.T01:CDS |
| GAACATTTCTGCATTCATGC+CGG | 0.553989 | 2:+45491727 | MsG0280009108.01.T01:CDS |
| GAGAGTCGAGCAAATAATAA+CGG | 0.554120 | 2:-45490765 | None:intergenic |
| AGTTACAATCTTGGTGGGAT+GGG | 0.556990 | 2:+45491217 | MsG0280009108.01.T01:CDS |
| AGCACCCTTGTTAGTGCGAA+CGG | 0.557174 | 2:-45491467 | None:intergenic |
| TGGTGGATCTCATCGATCCA+AGG | 0.558878 | 2:-45492006 | None:intergenic |
| TTAACAAGGTAGACTGGCCT+AGG | 0.559143 | 2:-45490824 | None:intergenic |
| TCATCCTAACTCGTATGCGT+TGG | 0.563252 | 2:+45491291 | MsG0280009108.01.T01:CDS |
| ATTGGCTTACACGGAAGCCA+AGG | 0.568482 | 2:+45491870 | MsG0280009108.01.T01:CDS |
| AAAACTTGAAGCTGTCTCCA+TGG | 0.569815 | 2:+45491779 | MsG0280009108.01.T01:CDS |
| AAATTGAAGTATGTGAAGCT+TGG | 0.574482 | 2:+45490608 | MsG0280009108.01.T01:CDS |
| GAATTGCAGCCCCTCCCATA+CGG | 0.574490 | 2:-45491390 | None:intergenic |
| GAAAACAAACATTACCACGT+TGG | 0.574589 | 2:+45491591 | MsG0280009108.01.T01:CDS |
| AACAGCAACTGTTCGGACGT+TGG | 0.575994 | 2:-45491628 | None:intergenic |
| ACGGTAAAGCCTAAAGACAT+TGG | 0.576657 | 2:+45491103 | MsG0280009108.01.T01:CDS |
| TTTCTAACAGGGGATCGGAT+AGG | 0.576964 | 2:+45491416 | MsG0280009108.01.T01:CDS |
| GAGAAATTAACAAGGTAGAC+TGG | 0.577191 | 2:-45490830 | None:intergenic |
| CATACGAGTTAGGATGAACC+TGG | 0.577273 | 2:-45491285 | None:intergenic |
| TTGGTACGAATTGGCTTACA+CGG | 0.578204 | 2:+45491861 | MsG0280009108.01.T01:CDS |
| TCACGTTGAATTGGTATCCC+GGG | 0.579569 | 2:+45491332 | MsG0280009108.01.T01:CDS |
| TAATTTCTCGTGTTACAAGC+CGG | 0.580512 | 2:+45490844 | MsG0280009108.01.T01:CDS |
| TATCATTACCTAATCACTCA+TGG | 0.585224 | 2:+45490632 | MsG0280009108.01.T01:CDS |
| GGAAGGATCCGCGACGACGA+TGG | 0.585504 | 2:-45490566 | None:intergenic |
| TCTTTCATTGAAGGATTGGG+AGG | 0.589318 | 2:-45491019 | None:intergenic |
| CATTTCTGCATTCATGCCGG+TGG | 0.590314 | 2:+45491730 | MsG0280009108.01.T01:CDS |
| ATCCTTCAATGAAAGAAGCT+AGG | 0.592042 | 2:+45491026 | MsG0280009108.01.T01:CDS |
| ATGGATCACTCGAGGGCGAG+TGG | 0.595528 | 2:+45490899 | MsG0280009108.01.T01:CDS |
| ATGATCATTGCAGAGAGTGA+CGG | 0.597131 | 2:-45491163 | None:intergenic |
| GAACATCGACCGGAAACTGG+TGG | 0.598498 | 2:-45492023 | None:intergenic |
| ATAATGAGTTACAATCTTGG+TGG | 0.599058 | 2:+45491211 | MsG0280009108.01.T01:CDS |
| TAATGAGTTACAATCTTGGT+GGG | 0.599305 | 2:+45491212 | MsG0280009108.01.T01:CDS |
| GTTGCTGTTCTTCGCTACGT+TGG | 0.607168 | 2:+45491642 | MsG0280009108.01.T01:CDS |
| TGCAATTCTACTTTCTAACA+GGG | 0.608164 | 2:+45491405 | MsG0280009108.01.T01:CDS |
| GGTGGATCTCATCGATCCAA+GGG | 0.617008 | 2:-45492005 | None:intergenic |
| GTACCAAAGCGAACTGCTAG+AGG | 0.619086 | 2:-45491845 | None:intergenic |
| AGATATCATAGATATCATTG+AGG | 0.623017 | 2:-45490715 | None:intergenic |
| GCTGCAATTAACACCACAAG+TGG | 0.623028 | 2:-45490674 | None:intergenic |
| TGCTTAGAACAGCTTCTGGT+AGG | 0.624810 | 2:-45490994 | None:intergenic |
| GGATATTTATGGATCACTCG+AGG | 0.626023 | 2:+45490891 | MsG0280009108.01.T01:CDS |
| CCTTGTTAGTGCGAACGGTG+TGG | 0.627883 | 2:-45491462 | None:intergenic |
| TCAAGAAAGGAGATAGAACA+TGG | 0.636177 | 2:+45491899 | MsG0280009108.01.T01:CDS |
| AAACAAACATTACCACGTTG+GGG | 0.638025 | 2:+45491593 | MsG0280009108.01.T01:CDS |
| AGAAGCTAGGAAAGAAGCGG+AGG | 0.638732 | 2:+45491039 | MsG0280009108.01.T01:CDS |
| CTTGACGGCTCCATATGCCA+TGG | 0.639071 | 2:-45491796 | None:intergenic |
| TCGGACGTTGGAAGGACAAG+TGG | 0.640146 | 2:-45491616 | None:intergenic |
| GACGACGATGGCGCTAACAA+GGG | 0.641367 | 2:-45490554 | None:intergenic |
| GATATTTATGGATCACTCGA+GGG | 0.648472 | 2:+45490892 | MsG0280009108.01.T01:CDS |
| TTGGCTTACACGGAAGCCAA+GGG | 0.648617 | 2:+45491871 | MsG0280009108.01.T01:CDS |
| CTTACACGGAAGCCAAGGGA+AGG | 0.652154 | 2:+45491875 | MsG0280009108.01.T01:CDS |
| GAAAGAAGCTAGGAAAGAAG+CGG | 0.654182 | 2:+45491036 | MsG0280009108.01.T01:CDS |
| ATCAATCACTATAAGCTGAG+AGG | 0.664913 | 2:+45491184 | MsG0280009108.01.T01:CDS |
| GCAATTCTACTTTCTAACAG+GGG | 0.671034 | 2:+45491406 | MsG0280009108.01.T01:CDS |
| TGTTAGCGCCATCGTCGTCG+CGG | 0.673997 | 2:+45490558 | MsG0280009108.01.T01:CDS |
| CACACCGTTCGCACTAACAA+GGG | 0.677053 | 2:+45491463 | MsG0280009108.01.T01:CDS |
| ACACAAGAAGAAGACGACAA+TGG | 0.692603 | 2:+45491514 | MsG0280009108.01.T01:CDS |
| GGCGAGTGGTTTCTTCACGG+AGG | 0.715615 | 2:+45490913 | MsG0280009108.01.T01:CDS |
| TGTAACACGAGAAATTAACA+AGG | 0.752828 | 2:-45490838 | None:intergenic |
| AAGGACAAGTGGCCCCAACG+TGG | 0.761089 | 2:-45491605 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTTATCAAAAGATCTTA+TGG | + | Chr2:45491549-45491568 | MsG0280009108.01.T01:CDS | 20.0% |
| ! | AACATAATGAGTTACAATCT+TGG | + | Chr2:45491208-45491227 | MsG0280009108.01.T01:CDS | 25.0% |
| ! | AGATATCATAGATATCATTG+AGG | - | Chr2:45490718-45490737 | None:intergenic | 25.0% |
| ! | CAATGATATCTATGATATCT+GGG | + | Chr2:45490718-45490737 | MsG0280009108.01.T01:CDS | 25.0% |
| ! | GATATCATAGATATCATTGA+GGG | - | Chr2:45490717-45490736 | None:intergenic | 25.0% |
| ! | TCAATGATATCTATGATATC+TGG | + | Chr2:45490717-45490736 | MsG0280009108.01.T01:CDS | 25.0% |
| !!! | TTCACTGATTTTTTGAAATC+TGG | - | Chr2:45490590-45490609 | None:intergenic | 25.0% |
| AAAACAAACATTACCACGTT+GGG | + | Chr2:45491592-45491611 | MsG0280009108.01.T01:CDS | 30.0% | |
| AAAAGGTCGATAAAAACACA+AGG | - | Chr2:45490790-45490809 | None:intergenic | 30.0% | |
| AAATTGAAGTATGTGAAGCT+TGG | + | Chr2:45490608-45490627 | MsG0280009108.01.T01:CDS | 30.0% | |
| ATAATGAGTTACAATCTTGG+TGG | + | Chr2:45491211-45491230 | MsG0280009108.01.T01:CDS | 30.0% | |
| ATCAGAATTCCAATGTCTTT+AGG | - | Chr2:45491115-45491134 | None:intergenic | 30.0% | |
| ATGCACTAAGAGGATATTTA+TGG | + | Chr2:45490880-45490899 | MsG0280009108.01.T01:CDS | 30.0% | |
| TAATGAGTTACAATCTTGGT+GGG | + | Chr2:45491212-45491231 | MsG0280009108.01.T01:CDS | 30.0% | |
| TATCATTACCTAATCACTCA+TGG | + | Chr2:45490632-45490651 | MsG0280009108.01.T01:CDS | 30.0% | |
| TGCAATTCTACTTTCTAACA+GGG | + | Chr2:45491405-45491424 | MsG0280009108.01.T01:CDS | 30.0% | |
| TGTAACACGAGAAATTAACA+AGG | - | Chr2:45490841-45490860 | None:intergenic | 30.0% | |
| ! | AGAATGACACTTTATCGTTT+TGG | + | Chr2:45491817-45491836 | MsG0280009108.01.T01:CDS | 30.0% |
| ! | GAAGATAAAGCCTTATATTC+CGG | + | Chr2:45491687-45491706 | MsG0280009108.01.T01:CDS | 30.0% |
| !!! | CTGATTTTTTGAAATCTGGA+AGG | - | Chr2:45490586-45490605 | None:intergenic | 30.0% |
| AAACAAACATTACCACGTTG+GGG | + | Chr2:45491593-45491612 | MsG0280009108.01.T01:CDS | 35.0% | |
| AGAACATGGCAAATAGCATT+TGG | + | Chr2:45491913-45491932 | MsG0280009108.01.T01:CDS | 35.0% | |
| AGCTTCTTTCATTGAAGGAT+TGG | - | Chr2:45491026-45491045 | None:intergenic | 35.0% | |
| AGCTTGAAATCCGGAATATA+AGG | - | Chr2:45491700-45491719 | None:intergenic | 35.0% | |
| AGGACGAGTCATAAAGTAAA+AGG | - | Chr2:45490807-45490826 | None:intergenic | 35.0% | |
| ATCAATCACTATAAGCTGAG+AGG | + | Chr2:45491184-45491203 | MsG0280009108.01.T01:CDS | 35.0% | |
| ATCCTTCAATGAAAGAAGCT+AGG | + | Chr2:45491026-45491045 | MsG0280009108.01.T01:CDS | 35.0% | |
| CAAACAATTCGAAACAAGCT+TGG | - | Chr2:45491368-45491387 | None:intergenic | 35.0% | |
| CTGCAATTCTACTTTCTAAC+AGG | + | Chr2:45491404-45491423 | MsG0280009108.01.T01:CDS | 35.0% | |
| GAAAACAAACATTACCACGT+TGG | + | Chr2:45491591-45491610 | MsG0280009108.01.T01:CDS | 35.0% | |
| GAGAAATTAACAAGGTAGAC+TGG | - | Chr2:45490833-45490852 | None:intergenic | 35.0% | |
| GAGAAGATCCAAATACCAAT+TGG | + | Chr2:45491438-45491457 | MsG0280009108.01.T01:CDS | 35.0% | |
| GAGAGTCGAGCAAATAATAA+CGG | - | Chr2:45490768-45490787 | None:intergenic | 35.0% | |
| GATATTTATGGATCACTCGA+GGG | + | Chr2:45490892-45490911 | MsG0280009108.01.T01:CDS | 35.0% | |
| GCAATTCTACTTTCTAACAG+GGG | + | Chr2:45491406-45491425 | MsG0280009108.01.T01:CDS | 35.0% | |
| GCTTCTTTCATTGAAGGATT+GGG | - | Chr2:45491025-45491044 | None:intergenic | 35.0% | |
| TAATTTCTCGTGTTACAAGC+CGG | + | Chr2:45490844-45490863 | MsG0280009108.01.T01:CDS | 35.0% | |
| TCAAGAAAGGAGATAGAACA+TGG | + | Chr2:45491899-45491918 | MsG0280009108.01.T01:CDS | 35.0% | |
| TCGAATTGTTTGTTCCGTAT+GGG | + | Chr2:45491376-45491395 | MsG0280009108.01.T01:CDS | 35.0% | |
| TTCCTAGCTTCTTTCATTGA+AGG | - | Chr2:45491031-45491050 | None:intergenic | 35.0% | |
| TTCGAATTGTTTGTTCCGTA+TGG | + | Chr2:45491375-45491394 | MsG0280009108.01.T01:CDS | 35.0% | |
| TTTACTTTATGACTCGTCCT+AGG | + | Chr2:45490807-45490826 | MsG0280009108.01.T01:CDS | 35.0% | |
| ! | CGATAAAGTGTCATTCTTGA+CGG | - | Chr2:45491814-45491833 | None:intergenic | 35.0% |
| ! | TCAAAAGCTAGCTTGAAATC+CGG | - | Chr2:45491709-45491728 | None:intergenic | 35.0% |
| !! | CGTGGTAATGTTTGTTTTCA+AGG | - | Chr2:45491590-45491609 | None:intergenic | 35.0% |
| AAAACTTGAAGCTGTCTCCA+TGG | + | Chr2:45491779-45491798 | MsG0280009108.01.T01:CDS | 40.0% | |
| AATTGTTTGTTCCGTATGGG+AGG | + | Chr2:45491379-45491398 | MsG0280009108.01.T01:CDS | 40.0% | |
| ACACAAGAAGAAGACGACAA+TGG | + | Chr2:45491514-45491533 | MsG0280009108.01.T01:CDS | 40.0% | |
| ACGGTAAAGCCTAAAGACAT+TGG | + | Chr2:45491103-45491122 | MsG0280009108.01.T01:CDS | 40.0% | |
| AGTTACAATCTTGGTGGGAT+GGG | + | Chr2:45491217-45491236 | MsG0280009108.01.T01:CDS | 40.0% | |
| ATCACGTTGAATTGGTATCC+CGG | + | Chr2:45491331-45491350 | MsG0280009108.01.T01:CDS | 40.0% | |
| ATCTCTCAAGGATCTTTCGT+TGG | - | Chr2:45490952-45490971 | None:intergenic | 40.0% | |
| ATGATCATTGCAGAGAGTGA+CGG | - | Chr2:45491166-45491185 | None:intergenic | 40.0% | |
| ATTGTTTGTTCCGTATGGGA+GGG | + | Chr2:45491380-45491399 | MsG0280009108.01.T01:CDS | 40.0% | |
| CTACAAAAGAGAAGAACCCT+TGG | + | Chr2:45491989-45492008 | MsG0280009108.01.T01:CDS | 40.0% | |
| GAAAGAAGCTAGGAAAGAAG+CGG | + | Chr2:45491036-45491055 | MsG0280009108.01.T01:CDS | 40.0% | |
| GAAATTCTTGGAACATCGAC+CGG | - | Chr2:45492036-45492055 | None:intergenic | 40.0% | |
| GAACATTTCTGCATTCATGC+CGG | + | Chr2:45491727-45491746 | MsG0280009108.01.T01:CDS | 40.0% | |
| GGATATTTATGGATCACTCG+AGG | + | Chr2:45490891-45490910 | MsG0280009108.01.T01:CDS | 40.0% | |
| TCTACTTTCTAACAGGGGAT+CGG | + | Chr2:45491411-45491430 | MsG0280009108.01.T01:CDS | 40.0% | |
| TCTTTCATTGAAGGATTGGG+AGG | - | Chr2:45491022-45491041 | None:intergenic | 40.0% | |
| TGGAGAACATCACGTTGAAT+TGG | + | Chr2:45491323-45491342 | MsG0280009108.01.T01:CDS | 40.0% | |
| ! | ATCTAAAACAGCTCTTCCAC+CGG | - | Chr2:45491749-45491768 | None:intergenic | 40.0% |
| ! | CAAGGGTTCTTCTCTTTTGT+AGG | - | Chr2:45491991-45492010 | None:intergenic | 40.0% |
| ! | TGGCAAATAGCATTTGGTTC+TGG | + | Chr2:45491919-45491938 | MsG0280009108.01.T01:CDS | 40.0% |
| ! | TTGGTACGAATTGGCTTACA+CGG | + | Chr2:45491861-45491880 | MsG0280009108.01.T01:CDS | 40.0% |
| !! | TGAGCTGTTTTCGAAGACAA+CGG | + | Chr2:45491084-45491103 | MsG0280009108.01.T01:CDS | 40.0% |
| AAAGATCTTATGGCCGTTGC+AGG | + | Chr2:45491559-45491578 | MsG0280009108.01.T01:CDS | 45.0% | |
| ACAACCAACGCATACGAGTT+AGG | - | Chr2:45491298-45491317 | None:intergenic | 45.0% | |
| AGCGAAGAACAGCAACTGTT+CGG | - | Chr2:45491638-45491657 | None:intergenic | 45.0% | |
| AGTCTCGCAAATGCACTAAG+AGG | + | Chr2:45490870-45490889 | MsG0280009108.01.T01:CDS | 45.0% | |
| ATCCTTGAGAGATCTGGTCT+TGG | + | Chr2:45490959-45490978 | MsG0280009108.01.T01:CDS | 45.0% | |
| CAGTTCGCTTTGGTACGAAT+TGG | + | Chr2:45491852-45491871 | MsG0280009108.01.T01:CDS | 45.0% | |
| CATACGAGTTAGGATGAACC+TGG | - | Chr2:45491288-45491307 | None:intergenic | 45.0% | |
| CCACAAGTGGTGAAAGAAAG+AGG | - | Chr2:45490664-45490683 | None:intergenic | 45.0% | |
| CCTCTTTCTTTCACCACTTG+TGG | + | Chr2:45490661-45490680 | MsG0280009108.01.T01:CDS | 45.0% | |
| CGAAAGATCCTTGAGAGATC+TGG | + | Chr2:45490953-45490972 | MsG0280009108.01.T01:CDS | 45.0% | |
| GAAGACGACAATGGCAAAGT+TGG | + | Chr2:45491523-45491542 | MsG0280009108.01.T01:CDS | 45.0% | |
| GAGTTACAATCTTGGTGGGA+TGG | + | Chr2:45491216-45491235 | MsG0280009108.01.T01:CDS | 45.0% | |
| GCTGCAATTAACACCACAAG+TGG | - | Chr2:45490677-45490696 | None:intergenic | 45.0% | |
| GGAATGCTTAGAACAGCTTC+TGG | - | Chr2:45491001-45491020 | None:intergenic | 45.0% | |
| GGTACATGCCATGAGTGATT+AGG | - | Chr2:45490643-45490662 | None:intergenic | 45.0% | |
| GGTGTGGACCAATTGGTATT+TGG | - | Chr2:45491449-45491468 | None:intergenic | 45.0% | |
| TCACGTTGAATTGGTATCCC+GGG | + | Chr2:45491332-45491351 | MsG0280009108.01.T01:CDS | 45.0% | |
| TCATCCTAACTCGTATGCGT+TGG | + | Chr2:45491291-45491310 | MsG0280009108.01.T01:CDS | 45.0% | |
| TCCTTTCTTGATCCTTCCCT+TGG | - | Chr2:45491890-45491909 | None:intergenic | 45.0% | |
| TCTTGCTAAAGAGCTTCTCC+AGG | + | Chr2:45491267-45491286 | MsG0280009108.01.T01:CDS | 45.0% | |
| TGCTTAGAACAGCTTCTGGT+AGG | - | Chr2:45490997-45491016 | None:intergenic | 45.0% | |
| TTGTTTGTTCCGTATGGGAG+GGG | + | Chr2:45491381-45491400 | MsG0280009108.01.T01:CDS | 45.0% | |
| TTTCTAACAGGGGATCGGAT+AGG | + | Chr2:45491416-45491435 | MsG0280009108.01.T01:CDS | 45.0% | |
| ! | TTTCAAGGCATCACCTGCAA+CGG | - | Chr2:45491575-45491594 | None:intergenic | 45.0% |
| !! | GTATGCGTTGGTTGTTAGCA+TGG | + | Chr2:45491303-45491322 | MsG0280009108.01.T01:CDS | 45.0% |
| !! | TTAACAAGGTAGACTGGCCT+AGG | - | Chr2:45490827-45490846 | None:intergenic | 45.0% |
| AACAGCAACTGTTCGGACGT+TGG | - | Chr2:45491631-45491650 | None:intergenic | 50.0% | |
| AAGCTTGGATCGATCGTTCC+CGG | - | Chr2:45491353-45491372 | None:intergenic | 50.0% | |
| ACACCTCTAGCAGTTCGCTT+TGG | + | Chr2:45491842-45491861 | MsG0280009108.01.T01:CDS | 50.0% | |
| AGAAGCTAGGAAAGAAGCGG+AGG | + | Chr2:45491039-45491058 | MsG0280009108.01.T01:CDS | 50.0% | |
| AGCACCCTTGTTAGTGCGAA+CGG | - | Chr2:45491470-45491489 | None:intergenic | 50.0% | |
| CACACCGTTCGCACTAACAA+GGG | + | Chr2:45491463-45491482 | MsG0280009108.01.T01:CDS | 50.0% | |
| CATTTCTGCATTCATGCCGG+TGG | + | Chr2:45491730-45491749 | MsG0280009108.01.T01:CDS | 50.0% | |
| CGATGAGATCCACCAGTTTC+CGG | + | Chr2:45492014-45492033 | MsG0280009108.01.T01:CDS | 50.0% | |
| CTCCAAGACCAGATCTCTCA+AGG | - | Chr2:45490964-45490983 | None:intergenic | 50.0% | |
| CTGTTCTTCGCTACGTTGGT+TGG | + | Chr2:45491646-45491665 | MsG0280009108.01.T01:CDS | 50.0% | |
| GAAGCGGAGGCAGTTATGTT+TGG | + | Chr2:45491052-45491071 | MsG0280009108.01.T01:CDS | 50.0% | |
| GAAGCTGTCTCCATGGCATA+TGG | + | Chr2:45491786-45491805 | MsG0280009108.01.T01:CDS | 50.0% | |
| GCCAAGGGAAGGATCAAGAA+AGG | + | Chr2:45491886-45491905 | MsG0280009108.01.T01:CDS | 50.0% | |
| GGTGGATCTCATCGATCCAA+GGG | - | Chr2:45492008-45492027 | None:intergenic | 50.0% | |
| GTACCAAAGCGAACTGCTAG+AGG | - | Chr2:45491848-45491867 | None:intergenic | 50.0% | |
| GTGCATTTGCGAGACTCTTC+CGG | - | Chr2:45490866-45490885 | None:intergenic | 50.0% | |
| TCAAGTGCAACAGCGCAGTA+TGG | + | Chr2:45491944-45491963 | MsG0280009108.01.T01:CDS | 50.0% | |
| TTGGAACATCGACCGGAAAC+TGG | - | Chr2:45492029-45492048 | None:intergenic | 50.0% | |
| TTGGCTTACACGGAAGCCAA+GGG | + | Chr2:45491871-45491890 | MsG0280009108.01.T01:CDS | 50.0% | |
| ! | ATTGCAGAGAGTGACGGAGT+TGG | - | Chr2:45491160-45491179 | None:intergenic | 50.0% |
| ! | ATTGGCTTACACGGAAGCCA+AGG | + | Chr2:45491870-45491889 | MsG0280009108.01.T01:CDS | 50.0% |
| ! | GTTGCTGTTCTTCGCTACGT+TGG | + | Chr2:45491642-45491661 | MsG0280009108.01.T01:CDS | 50.0% |
| ! | TGGTGGATCTCATCGATCCA+AGG | - | Chr2:45492009-45492028 | None:intergenic | 50.0% |
| AGCTTGGATCGATCGTTCCC+GGG | - | Chr2:45491352-45491371 | None:intergenic | 55.0% | |
| CCACACCGTTCGCACTAACA+AGG | + | Chr2:45491462-45491481 | MsG0280009108.01.T01:CDS | 55.0% | |
| CCTTGTTAGTGCGAACGGTG+TGG | - | Chr2:45491465-45491484 | None:intergenic | 55.0% | |
| CTTACACGGAAGCCAAGGGA+AGG | + | Chr2:45491875-45491894 | MsG0280009108.01.T01:CDS | 55.0% | |
| CTTGACGGCTCCATATGCCA+TGG | - | Chr2:45491799-45491818 | None:intergenic | 55.0% | |
| GAACATCGACCGGAAACTGG+TGG | - | Chr2:45492026-45492045 | None:intergenic | 55.0% | |
| GAATTGCAGCCCCTCCCATA+CGG | - | Chr2:45491393-45491412 | None:intergenic | 55.0% | |
| GACGACGATGGCGCTAACAA+GGG | - | Chr2:45490557-45490576 | None:intergenic | 55.0% | |
| GAGGGCGAGTGGTTTCTTCA+CGG | + | Chr2:45490910-45490929 | MsG0280009108.01.T01:CDS | 55.0% | |
| GCAACTGTTCGGACGTTGGA+AGG | - | Chr2:45491627-45491646 | None:intergenic | 55.0% | |
| GCGCAGTATGGAAGGCTCTA+AGG | + | Chr2:45491956-45491975 | MsG0280009108.01.T01:CDS | 55.0% | |
| GTGCAACAGCGCAGTATGGA+AGG | + | Chr2:45491948-45491967 | MsG0280009108.01.T01:CDS | 55.0% | |
| TCGGACGTTGGAAGGACAAG+TGG | - | Chr2:45491619-45491638 | None:intergenic | 55.0% | |
| TGCGAACGGTGTGGACCAAT+TGG | - | Chr2:45491456-45491475 | None:intergenic | 55.0% | |
| AAGGACAAGTGGCCCCAACG+TGG | - | Chr2:45491608-45491627 | None:intergenic | 60.0% | |
| ATGGATCACTCGAGGGCGAG+TGG | + | Chr2:45490899-45490918 | MsG0280009108.01.T01:CDS | 60.0% | |
| CGACGACGATGGCGCTAACA+AGG | - | Chr2:45490558-45490577 | None:intergenic | 60.0% | |
| GGCGAGTGGTTTCTTCACGG+AGG | + | Chr2:45490913-45490932 | MsG0280009108.01.T01:CDS | 60.0% | |
| GTGGGATGGGATGCAGTGCT+GGG | + | Chr2:45491230-45491249 | MsG0280009108.01.T01:CDS | 60.0% | |
| TGTTAGCGCCATCGTCGTCG+CGG | + | Chr2:45490558-45490577 | MsG0280009108.01.T01:CDS | 60.0% | |
| GGAAGGATCCGCGACGACGA+TGG | - | Chr2:45490569-45490588 | None:intergenic | 65.0% | |
| GGTGGGATGGGATGCAGTGC+TGG | + | Chr2:45491229-45491248 | MsG0280009108.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 45490530 | 45492065 | 45490530 | ID=MsG0280009108.01;Name=MsG0280009108.01 |
| Chr2 | mRNA | 45490530 | 45492065 | 45490530 | ID=MsG0280009108.01.T01;Parent=MsG0280009108.01;Name=MsG0280009108.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|511 |
| Chr2 | exon | 45490530 | 45492065 | 45490530 | ID=MsG0280009108.01.T01:exon:24008;Parent=MsG0280009108.01.T01 |
| Chr2 | CDS | 45490530 | 45492065 | 45490530 | ID=MsG0280009108.01.T01:cds;Parent=MsG0280009108.01.T01 |
| Gene Sequence |
| Protein sequence |
