Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005054.01.T01 | AES62009.1 | 88.487 | 304 | 20 | 2 | 1 | 304 | 1 | 289 | 0 | 551 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005054.01.T01 | Q9LZS7 | 44.689 | 273 | 144 | 4 | 30 | 296 | 8 | 279 | 1.27E-78 | 246 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005054.01.T01 | G7I351 | 88.487 | 304 | 20 | 2 | 1 | 304 | 1 | 289 | 0.0 | 551 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048652.01 | MsG0180005054.01 | 0.805441 | 1.333130e-49 | 7.053432e-47 |
MsG0180003955.01 | MsG0180005054.01 | 0.832424 | 9.527547e-56 | 1.064456e-52 |
MsG0180005054.01 | MsG0180005757.01 | 0.830402 | 2.996532e-55 | 3.153771e-52 |
MsG0180005054.01 | MsG0280006485.01 | 0.812489 | 4.131456e-51 | 2.630522e-48 |
MsG0180005054.01 | MsG0380013118.01 | 0.836288 | 1.021730e-56 | 1.281988e-53 |
MsG0180005054.01 | MsG0380014734.01 | 0.815074 | 1.113726e-51 | 7.602211e-49 |
MsG0180005054.01 | MsG0480020722.01 | 0.811540 | 6.652574e-51 | 4.129171e-48 |
MsG0180005054.01 | MsG0580025822.01 | 0.821198 | 4.587610e-53 | 3.707708e-50 |
MsG0180005054.01 | MsG0580027036.01 | 0.837018 | 6.657511e-57 | 8.537935e-54 |
MsG0180005054.01 | MsG0580027201.01 | 0.822336 | 2.501945e-53 | 2.088126e-50 |
MsG0180005054.01 | MsG0680031841.01 | 0.800300 | 1.537707e-48 | 7.135250e-46 |
MsG0180005054.01 | MsG0780040878.01 | 0.860272 | 2.319036e-63 | 6.302673e-60 |
MsG0180005054.01 | MsG0880045790.01 | 0.834746 | 2.507882e-56 | 3.003361e-53 |
MsG0180005054.01 | MsG0880046463.01 | 0.832630 | 8.469278e-56 | 9.520708e-53 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005054.01.T01 | MTR_1g092690 | 88.487 | 304 | 20 | 2 | 1 | 304 | 1 | 289 | 0.0 | 551 |
MsG0180005054.01.T01 | MTR_1g092740 | 67.742 | 248 | 77 | 2 | 55 | 301 | 29 | 274 | 2.37e-119 | 347 |
MsG0180005054.01.T01 | MTR_1g092760 | 65.234 | 256 | 87 | 2 | 49 | 303 | 23 | 277 | 4.09e-119 | 346 |
MsG0180005054.01.T01 | MTR_1g092750 | 63.035 | 257 | 93 | 1 | 49 | 303 | 23 | 279 | 8.60e-119 | 345 |
MsG0180005054.01.T01 | MTR_7g104220 | 50.209 | 239 | 112 | 4 | 65 | 296 | 41 | 279 | 1.60e-78 | 243 |
MsG0180005054.01.T01 | MTR_1g060490 | 47.699 | 239 | 119 | 3 | 64 | 296 | 35 | 273 | 1.02e-76 | 238 |
MsG0180005054.01.T01 | MTR_1g060500 | 44.130 | 247 | 127 | 4 | 61 | 296 | 35 | 281 | 2.19e-66 | 212 |
MsG0180005054.01.T01 | MTR_1g092710 | 63.504 | 137 | 47 | 2 | 172 | 305 | 3 | 139 | 1.92e-52 | 170 |
MsG0180005054.01.T01 | MTR_1g060520 | 35.165 | 273 | 138 | 4 | 32 | 296 | 6 | 247 | 5.32e-49 | 166 |
MsG0180005054.01.T01 | MTR_2g461580 | 33.462 | 260 | 145 | 9 | 67 | 301 | 32 | 288 | 7.14e-28 | 110 |
MsG0180005054.01.T01 | MTR_3g021460 | 34.274 | 248 | 131 | 9 | 67 | 287 | 32 | 274 | 3.16e-26 | 106 |
MsG0180005054.01.T01 | MTR_8g022790 | 31.698 | 265 | 149 | 9 | 54 | 296 | 33 | 287 | 3.32e-26 | 106 |
MsG0180005054.01.T01 | MTR_7g116570 | 29.167 | 264 | 153 | 10 | 61 | 294 | 29 | 288 | 1.49e-25 | 105 |
MsG0180005054.01.T01 | MTR_1g069175 | 29.658 | 263 | 160 | 8 | 64 | 301 | 31 | 293 | 6.27e-25 | 103 |
MsG0180005054.01.T01 | MTR_0009s0250 | 30.502 | 259 | 154 | 8 | 55 | 293 | 22 | 274 | 1.28e-24 | 102 |
MsG0180005054.01.T01 | MTR_8g031430 | 31.621 | 253 | 151 | 8 | 67 | 301 | 38 | 286 | 1.28e-24 | 102 |
MsG0180005054.01.T01 | MTR_1g079530 | 30.488 | 246 | 146 | 10 | 67 | 288 | 30 | 274 | 3.19e-24 | 101 |
MsG0180005054.01.T01 | MTR_3g052580 | 29.730 | 259 | 148 | 11 | 67 | 296 | 28 | 281 | 1.45e-23 | 100 |
MsG0180005054.01.T01 | MTR_3g052580 | 29.730 | 259 | 148 | 11 | 67 | 296 | 29 | 282 | 1.70e-23 | 99.8 |
MsG0180005054.01.T01 | MTR_8g022810 | 28.214 | 280 | 172 | 9 | 39 | 296 | 18 | 290 | 3.80e-23 | 98.6 |
MsG0180005054.01.T01 | MTR_5g074270 | 28.571 | 266 | 163 | 10 | 65 | 305 | 32 | 295 | 4.06e-23 | 98.2 |
MsG0180005054.01.T01 | MTR_1g025760 | 33.208 | 265 | 152 | 10 | 61 | 301 | 75 | 338 | 1.13e-22 | 97.4 |
MsG0180005054.01.T01 | MTR_1g024890 | 28.517 | 263 | 159 | 10 | 64 | 300 | 30 | 289 | 1.35e-22 | 96.7 |
MsG0180005054.01.T01 | MTR_1g079540 | 30.040 | 253 | 154 | 10 | 67 | 296 | 32 | 284 | 4.57e-22 | 95.1 |
MsG0180005054.01.T01 | MTR_7g116520 | 29.752 | 242 | 145 | 10 | 67 | 284 | 35 | 275 | 6.16e-22 | 95.1 |
MsG0180005054.01.T01 | MTR_2g084585 | 30.078 | 256 | 153 | 10 | 67 | 298 | 31 | 284 | 7.89e-22 | 94.4 |
MsG0180005054.01.T01 | MTR_3g005650 | 28.077 | 260 | 165 | 6 | 57 | 296 | 21 | 278 | 1.04e-21 | 94.0 |
MsG0180005054.01.T01 | MTR_4g035353 | 29.183 | 257 | 151 | 9 | 67 | 296 | 32 | 284 | 4.49e-21 | 92.4 |
MsG0180005054.01.T01 | MTR_8g075230 | 29.588 | 267 | 160 | 11 | 60 | 301 | 30 | 293 | 4.85e-21 | 92.4 |
MsG0180005054.01.T01 | MTR_3g114090 | 31.559 | 263 | 157 | 9 | 61 | 300 | 31 | 293 | 5.91e-21 | 92.0 |
MsG0180005054.01.T01 | MTR_8g031390 | 28.958 | 259 | 160 | 8 | 67 | 305 | 38 | 292 | 1.53e-20 | 90.5 |
MsG0180005054.01.T01 | MTR_8g079050 | 28.137 | 263 | 160 | 10 | 68 | 301 | 39 | 301 | 2.21e-20 | 90.5 |
MsG0180005054.01.T01 | MTR_8g031390 | 28.958 | 259 | 160 | 8 | 67 | 305 | 38 | 292 | 3.14e-20 | 90.1 |
MsG0180005054.01.T01 | MTR_5g078210 | 29.365 | 252 | 154 | 8 | 68 | 296 | 27 | 277 | 3.24e-20 | 89.4 |
MsG0180005054.01.T01 | MTR_1g025780 | 28.897 | 263 | 164 | 9 | 61 | 301 | 36 | 297 | 4.05e-20 | 89.7 |
MsG0180005054.01.T01 | MTR_5g078210 | 29.365 | 252 | 154 | 8 | 68 | 296 | 27 | 277 | 4.64e-20 | 89.4 |
MsG0180005054.01.T01 | MTR_8g031400 | 28.807 | 243 | 149 | 8 | 67 | 290 | 38 | 275 | 5.22e-20 | 89.4 |
MsG0180005054.01.T01 | MTR_3g098270 | 28.679 | 265 | 151 | 9 | 65 | 297 | 33 | 291 | 7.67e-20 | 89.4 |
MsG0180005054.01.T01 | MTR_1g025720 | 30.038 | 263 | 162 | 7 | 61 | 301 | 32 | 294 | 8.78e-20 | 88.6 |
MsG0180005054.01.T01 | MTR_8g031420 | 29.528 | 254 | 159 | 8 | 65 | 301 | 34 | 284 | 1.03e-19 | 88.6 |
MsG0180005054.01.T01 | MTR_4g122200 | 28.516 | 256 | 138 | 11 | 68 | 289 | 37 | 281 | 1.32e-19 | 88.2 |
MsG0180005054.01.T01 | MTR_2g033930 | 29.457 | 258 | 157 | 9 | 67 | 301 | 33 | 288 | 1.57e-19 | 88.2 |
MsG0180005054.01.T01 | MTR_2g044100 | 26.772 | 254 | 160 | 9 | 60 | 290 | 37 | 287 | 1.59e-19 | 88.6 |
MsG0180005054.01.T01 | MTR_3g052490 | 30.000 | 260 | 147 | 12 | 67 | 296 | 33 | 287 | 1.77e-19 | 87.8 |
MsG0180005054.01.T01 | MTR_8g022810 | 29.148 | 223 | 131 | 8 | 39 | 241 | 18 | 233 | 2.59e-19 | 87.0 |
MsG0180005054.01.T01 | MTR_8g087870 | 29.918 | 244 | 147 | 9 | 67 | 287 | 30 | 272 | 2.65e-19 | 87.4 |
MsG0180005054.01.T01 | MTR_7g116510 | 26.820 | 261 | 161 | 11 | 67 | 300 | 26 | 283 | 2.69e-19 | 87.4 |
MsG0180005054.01.T01 | MTR_2g033920 | 28.175 | 252 | 144 | 10 | 68 | 289 | 37 | 281 | 5.33e-19 | 85.9 |
MsG0180005054.01.T01 | MTR_2g033920 | 28.175 | 252 | 144 | 10 | 68 | 289 | 37 | 281 | 1.06e-18 | 85.9 |
MsG0180005054.01.T01 | MTR_4g087985 | 29.329 | 283 | 157 | 14 | 21 | 275 | 5 | 272 | 1.32e-18 | 85.5 |
MsG0180005054.01.T01 | MTR_1g025700 | 30.798 | 263 | 160 | 8 | 61 | 301 | 45 | 307 | 1.39e-18 | 85.5 |
MsG0180005054.01.T01 | MTR_2g017965 | 29.412 | 221 | 125 | 7 | 67 | 260 | 34 | 250 | 1.65e-18 | 85.5 |
MsG0180005054.01.T01 | MTR_3g005660 | 28.516 | 256 | 147 | 9 | 67 | 291 | 37 | 287 | 1.97e-18 | 85.1 |
MsG0180005054.01.T01 | MTR_7g116500 | 28.846 | 260 | 142 | 11 | 64 | 290 | 31 | 280 | 2.17e-18 | 84.7 |
MsG0180005054.01.T01 | MTR_3g052480 | 29.918 | 244 | 135 | 11 | 67 | 278 | 34 | 273 | 2.66e-18 | 84.7 |
MsG0180005054.01.T01 | MTR_1g030275 | 25.461 | 271 | 174 | 6 | 58 | 301 | 31 | 300 | 3.49e-18 | 84.3 |
MsG0180005054.01.T01 | MTR_3g024510 | 28.287 | 251 | 158 | 7 | 68 | 296 | 40 | 290 | 3.90e-18 | 84.3 |
MsG0180005054.01.T01 | MTR_1g025680 | 30.263 | 304 | 162 | 12 | 30 | 301 | 7 | 292 | 6.40e-18 | 84.0 |
MsG0180005054.01.T01 | MTR_4g056280 | 29.804 | 255 | 155 | 9 | 67 | 298 | 31 | 284 | 6.58e-18 | 83.6 |
MsG0180005054.01.T01 | MTR_7g087190 | 26.038 | 265 | 167 | 7 | 67 | 302 | 44 | 308 | 8.22e-18 | 83.6 |
MsG0180005054.01.T01 | MTR_7g033150 | 25.368 | 272 | 163 | 9 | 67 | 301 | 36 | 304 | 9.44e-18 | 83.2 |
MsG0180005054.01.T01 | MTR_3g023220 | 27.311 | 238 | 151 | 6 | 67 | 284 | 34 | 269 | 1.12e-17 | 82.8 |
MsG0180005054.01.T01 | MTR_2g017875 | 27.755 | 245 | 153 | 7 | 67 | 287 | 35 | 279 | 1.53e-17 | 82.4 |
MsG0180005054.01.T01 | MTR_2g015080 | 27.612 | 268 | 160 | 12 | 67 | 301 | 39 | 305 | 1.78e-17 | 82.4 |
MsG0180005054.01.T01 | MTR_5g084750 | 28.125 | 256 | 158 | 10 | 67 | 298 | 31 | 284 | 2.67e-17 | 81.6 |
MsG0180005054.01.T01 | MTR_8g074560 | 31.120 | 241 | 137 | 10 | 67 | 278 | 32 | 272 | 3.37e-17 | 81.6 |
MsG0180005054.01.T01 | MTR_3g114120 | 28.517 | 263 | 166 | 7 | 61 | 301 | 42 | 304 | 5.65e-17 | 80.9 |
MsG0180005054.01.T01 | MTR_6g007100 | 25.769 | 260 | 167 | 6 | 67 | 302 | 34 | 291 | 9.66e-17 | 80.1 |
MsG0180005054.01.T01 | MTR_1g030268 | 26.007 | 273 | 170 | 8 | 58 | 301 | 32 | 301 | 1.02e-16 | 79.7 |
MsG0180005054.01.T01 | MTR_1g030268 | 26.007 | 273 | 170 | 8 | 58 | 301 | 32 | 301 | 1.12e-16 | 80.1 |
MsG0180005054.01.T01 | MTR_2g017955 | 29.493 | 217 | 129 | 9 | 67 | 260 | 34 | 249 | 1.25e-16 | 79.7 |
MsG0180005054.01.T01 | MTR_6g007095 | 24.088 | 274 | 175 | 5 | 61 | 302 | 31 | 303 | 2.02e-16 | 80.1 |
MsG0180005054.01.T01 | MTR_6g007095 | 22.814 | 263 | 172 | 4 | 70 | 302 | 369 | 630 | 8.13e-12 | 66.2 |
MsG0180005054.01.T01 | MTR_1g030340 | 22.711 | 273 | 184 | 4 | 56 | 301 | 32 | 304 | 2.60e-16 | 79.0 |
MsG0180005054.01.T01 | MTR_6g021530 | 27.059 | 255 | 160 | 11 | 67 | 296 | 30 | 283 | 4.19e-16 | 78.2 |
MsG0180005054.01.T01 | MTR_0565s0010 | 27.668 | 253 | 158 | 8 | 68 | 296 | 34 | 285 | 7.74e-16 | 77.4 |
MsG0180005054.01.T01 | MTR_4g108690 | 26.482 | 253 | 163 | 7 | 68 | 297 | 29 | 281 | 7.81e-16 | 77.4 |
MsG0180005054.01.T01 | MTR_2g015590 | 25.620 | 242 | 149 | 7 | 65 | 275 | 30 | 271 | 1.49e-15 | 76.6 |
MsG0180005054.01.T01 | MTR_3g435540 | 26.070 | 257 | 167 | 8 | 68 | 301 | 25 | 281 | 1.55e-15 | 76.6 |
MsG0180005054.01.T01 | MTR_2g017925 | 29.592 | 196 | 117 | 5 | 67 | 241 | 34 | 229 | 1.70e-15 | 76.6 |
MsG0180005054.01.T01 | MTR_7g116870 | 24.314 | 255 | 164 | 7 | 67 | 295 | 34 | 285 | 1.86e-15 | 76.6 |
MsG0180005054.01.T01 | MTR_4g104240 | 26.236 | 263 | 165 | 9 | 66 | 301 | 39 | 299 | 2.46e-15 | 76.3 |
MsG0180005054.01.T01 | MTR_7g033155 | 24.735 | 283 | 162 | 10 | 67 | 301 | 39 | 318 | 2.52e-15 | 76.3 |
MsG0180005054.01.T01 | MTR_2g015590 | 25.726 | 241 | 148 | 7 | 65 | 274 | 30 | 270 | 2.89e-15 | 75.9 |
MsG0180005054.01.T01 | MTR_1g030230 | 24.908 | 273 | 173 | 7 | 58 | 301 | 24 | 293 | 3.57e-15 | 75.5 |
MsG0180005054.01.T01 | MTR_1g025910 | 27.126 | 247 | 159 | 7 | 71 | 296 | 41 | 287 | 4.48e-15 | 75.5 |
MsG0180005054.01.T01 | MTR_8g014910 | 27.273 | 253 | 160 | 10 | 67 | 296 | 33 | 284 | 4.95e-15 | 75.1 |
MsG0180005054.01.T01 | MTR_4g056160 | 27.413 | 259 | 157 | 9 | 67 | 298 | 28 | 282 | 5.24e-15 | 75.1 |
MsG0180005054.01.T01 | MTR_5g084770 | 24.906 | 265 | 171 | 10 | 60 | 298 | 21 | 283 | 9.19e-15 | 74.3 |
MsG0180005054.01.T01 | MTR_8g075220 | 27.820 | 266 | 163 | 10 | 59 | 296 | 33 | 297 | 2.35e-14 | 73.2 |
MsG0180005054.01.T01 | MTR_2g100620 | 26.394 | 269 | 170 | 9 | 58 | 301 | 23 | 288 | 3.35e-14 | 72.8 |
MsG0180005054.01.T01 | MTR_5g009100 | 25.397 | 252 | 165 | 9 | 68 | 296 | 48 | 299 | 3.82e-14 | 72.8 |
MsG0180005054.01.T01 | MTR_8g089805 | 24.164 | 269 | 176 | 7 | 61 | 301 | 35 | 303 | 7.12e-14 | 72.0 |
MsG0180005054.01.T01 | MTR_3g464730 | 25.856 | 263 | 169 | 9 | 62 | 298 | 21 | 283 | 8.86e-14 | 71.2 |
MsG0180005054.01.T01 | MTR_5g022640 | 26.493 | 268 | 168 | 8 | 60 | 301 | 37 | 301 | 9.66e-14 | 71.2 |
MsG0180005054.01.T01 | MTR_8g074580 | 30.806 | 211 | 105 | 10 | 67 | 244 | 45 | 247 | 1.45e-13 | 70.9 |
MsG0180005054.01.T01 | MTR_5g093090 | 25.498 | 251 | 156 | 10 | 67 | 289 | 29 | 276 | 6.52e-13 | 68.6 |
MsG0180005054.01.T01 | MTR_8g038680 | 23.770 | 244 | 163 | 4 | 67 | 289 | 29 | 270 | 6.98e-13 | 68.9 |
MsG0180005054.01.T01 | MTR_5g093090 | 25.498 | 251 | 156 | 10 | 67 | 289 | 29 | 276 | 1.03e-12 | 68.2 |
MsG0180005054.01.T01 | MTR_3g082830 | 25.781 | 256 | 164 | 11 | 67 | 298 | 39 | 292 | 1.06e-12 | 68.2 |
MsG0180005054.01.T01 | MTR_2g017915 | 27.513 | 189 | 115 | 6 | 67 | 233 | 34 | 222 | 1.38e-12 | 67.8 |
MsG0180005054.01.T01 | MTR_5g084790 | 26.848 | 257 | 160 | 9 | 67 | 298 | 33 | 286 | 4.41e-12 | 66.2 |
MsG0180005054.01.T01 | MTR_6g007090 | 22.348 | 264 | 175 | 5 | 67 | 302 | 40 | 301 | 4.69e-12 | 66.2 |
MsG0180005054.01.T01 | MTR_2g015650 | 29.811 | 265 | 136 | 14 | 67 | 291 | 32 | 286 | 4.93e-12 | 66.2 |
MsG0180005054.01.T01 | MTR_7g033165 | 23.221 | 267 | 169 | 7 | 67 | 300 | 34 | 297 | 1.67e-11 | 64.3 |
MsG0180005054.01.T01 | MTR_7g033165 | 23.221 | 267 | 169 | 7 | 67 | 300 | 34 | 297 | 2.38e-11 | 64.3 |
MsG0180005054.01.T01 | MTR_2g015670 | 29.804 | 255 | 135 | 12 | 67 | 291 | 32 | 272 | 4.54e-11 | 63.2 |
MsG0180005054.01.T01 | MTR_1g079590 | 33.103 | 145 | 78 | 6 | 64 | 190 | 29 | 172 | 6.77e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005054.01.T01 | AT5G03610 | 44.689 | 273 | 144 | 4 | 30 | 296 | 8 | 279 | 1.29e-79 | 246 |
MsG0180005054.01.T01 | AT3G09930 | 43.529 | 255 | 137 | 4 | 48 | 295 | 21 | 275 | 1.38e-71 | 225 |
MsG0180005054.01.T01 | AT3G09930 | 43.529 | 255 | 137 | 4 | 48 | 295 | 21 | 275 | 1.38e-71 | 225 |
MsG0180005054.01.T01 | AT2G36325 | 41.322 | 242 | 128 | 5 | 65 | 296 | 46 | 283 | 1.04e-54 | 182 |
MsG0180005054.01.T01 | AT5G03600 | 33.740 | 246 | 155 | 5 | 66 | 303 | 14 | 259 | 2.98e-43 | 151 |
MsG0180005054.01.T01 | AT5G03600 | 33.740 | 246 | 155 | 5 | 66 | 303 | 49 | 294 | 5.55e-43 | 151 |
MsG0180005054.01.T01 | AT5G03590 | 41.341 | 179 | 95 | 6 | 48 | 218 | 17 | 193 | 2.28e-31 | 116 |
MsG0180005054.01.T01 | AT1G20120 | 29.496 | 278 | 156 | 9 | 53 | 301 | 69 | 335 | 2.74e-27 | 110 |
MsG0180005054.01.T01 | AT1G75890 | 31.985 | 272 | 152 | 12 | 61 | 305 | 42 | 307 | 1.94e-25 | 104 |
MsG0180005054.01.T01 | AT5G41890 | 29.545 | 264 | 155 | 8 | 68 | 300 | 33 | 296 | 2.36e-25 | 104 |
MsG0180005054.01.T01 | AT1G75890 | 32.319 | 263 | 147 | 11 | 61 | 296 | 71 | 329 | 2.76e-25 | 104 |
MsG0180005054.01.T01 | AT5G03590 | 31.739 | 230 | 108 | 8 | 85 | 303 | 7 | 198 | 7.35e-25 | 101 |
MsG0180005054.01.T01 | AT2G40250 | 30.303 | 264 | 157 | 9 | 65 | 301 | 35 | 298 | 1.12e-24 | 102 |
MsG0180005054.01.T01 | AT1G53920 | 27.652 | 264 | 171 | 9 | 46 | 291 | 30 | 291 | 1.51e-24 | 102 |
MsG0180005054.01.T01 | AT5G18430 | 30.233 | 258 | 148 | 12 | 67 | 294 | 29 | 284 | 4.71e-24 | 100 |
MsG0180005054.01.T01 | AT1G71691 | 28.685 | 251 | 160 | 5 | 67 | 298 | 56 | 306 | 6.32e-24 | 99.8 |
MsG0180005054.01.T01 | AT1G20132 | 27.444 | 266 | 157 | 8 | 60 | 296 | 55 | 313 | 6.78e-24 | 100 |
MsG0180005054.01.T01 | AT1G54030 | 27.083 | 240 | 163 | 7 | 67 | 298 | 53 | 288 | 8.35e-24 | 99.4 |
MsG0180005054.01.T01 | AT1G75890 | 30.175 | 285 | 153 | 12 | 61 | 305 | 42 | 320 | 1.48e-23 | 99.8 |
MsG0180005054.01.T01 | AT1G71691 | 28.800 | 250 | 159 | 5 | 67 | 297 | 56 | 305 | 1.55e-23 | 99.8 |
MsG0180005054.01.T01 | AT1G20135 | 30.196 | 255 | 153 | 9 | 65 | 296 | 28 | 280 | 1.71e-23 | 98.6 |
MsG0180005054.01.T01 | AT1G54030 | 27.083 | 240 | 163 | 7 | 67 | 298 | 53 | 288 | 2.64e-23 | 99.4 |
MsG0180005054.01.T01 | AT5G33370 | 27.820 | 266 | 161 | 10 | 62 | 300 | 26 | 287 | 6.63e-23 | 97.1 |
MsG0180005054.01.T01 | AT3G14820 | 31.864 | 295 | 159 | 12 | 25 | 296 | 5 | 280 | 8.30e-23 | 97.1 |
MsG0180005054.01.T01 | AT5G33370 | 27.820 | 266 | 161 | 10 | 62 | 300 | 26 | 287 | 1.71e-22 | 96.7 |
MsG0180005054.01.T01 | AT4G28780 | 27.341 | 267 | 164 | 9 | 62 | 301 | 26 | 289 | 9.56e-22 | 94.4 |
MsG0180005054.01.T01 | AT4G10950 | 28.016 | 257 | 162 | 9 | 67 | 300 | 72 | 328 | 1.79e-21 | 94.0 |
MsG0180005054.01.T01 | AT3G50400 | 28.897 | 263 | 157 | 10 | 68 | 300 | 36 | 298 | 2.15e-21 | 93.6 |
MsG0180005054.01.T01 | AT1G54000 | 26.378 | 254 | 163 | 9 | 67 | 303 | 37 | 283 | 5.43e-21 | 92.4 |
MsG0180005054.01.T01 | AT5G42170 | 30.769 | 273 | 169 | 9 | 43 | 296 | 28 | 299 | 5.52e-21 | 92.4 |
MsG0180005054.01.T01 | AT5G45960 | 27.820 | 266 | 161 | 11 | 65 | 301 | 46 | 309 | 1.22e-20 | 91.3 |
MsG0180005054.01.T01 | AT2G03980 | 27.668 | 253 | 160 | 10 | 63 | 295 | 40 | 289 | 1.64e-20 | 90.9 |
MsG0180005054.01.T01 | AT2G03980 | 27.668 | 253 | 160 | 10 | 63 | 295 | 40 | 289 | 1.64e-20 | 90.9 |
MsG0180005054.01.T01 | AT2G03980 | 27.668 | 253 | 160 | 10 | 63 | 295 | 40 | 289 | 1.64e-20 | 90.9 |
MsG0180005054.01.T01 | AT2G03980 | 27.668 | 253 | 160 | 10 | 63 | 295 | 40 | 289 | 1.64e-20 | 90.9 |
MsG0180005054.01.T01 | AT1G54010 | 25.794 | 252 | 167 | 8 | 67 | 303 | 37 | 283 | 1.71e-20 | 91.3 |
MsG0180005054.01.T01 | AT1G54020 | 26.383 | 235 | 162 | 6 | 67 | 293 | 34 | 265 | 2.37e-20 | 90.5 |
MsG0180005054.01.T01 | AT2G04020 | 31.193 | 218 | 118 | 10 | 63 | 252 | 40 | 253 | 7.34e-20 | 87.4 |
MsG0180005054.01.T01 | AT5G55050 | 29.231 | 260 | 153 | 10 | 67 | 297 | 40 | 297 | 8.00e-20 | 89.0 |
MsG0180005054.01.T01 | AT1G71120 | 29.464 | 224 | 129 | 8 | 67 | 267 | 32 | 249 | 8.01e-20 | 89.0 |
MsG0180005054.01.T01 | AT2G19010 | 29.707 | 239 | 153 | 6 | 67 | 290 | 31 | 269 | 8.66e-20 | 88.6 |
MsG0180005054.01.T01 | AT2G19010 | 29.707 | 239 | 153 | 6 | 67 | 290 | 61 | 299 | 1.20e-19 | 88.6 |
MsG0180005054.01.T01 | AT2G04570 | 30.233 | 258 | 146 | 11 | 67 | 296 | 29 | 280 | 1.79e-19 | 87.8 |
MsG0180005054.01.T01 | AT1G06990 | 25.385 | 260 | 168 | 8 | 67 | 301 | 38 | 296 | 1.91e-19 | 87.8 |
MsG0180005054.01.T01 | AT1G20130 | 28.261 | 276 | 161 | 10 | 61 | 305 | 199 | 468 | 1.98e-19 | 89.0 |
MsG0180005054.01.T01 | AT1G20130 | 28.736 | 261 | 153 | 9 | 61 | 290 | 179 | 437 | 2.03e-19 | 89.0 |
MsG0180005054.01.T01 | AT3G14210 | 27.419 | 248 | 156 | 10 | 67 | 297 | 37 | 277 | 2.74e-19 | 87.8 |
MsG0180005054.01.T01 | AT4G10950 | 27.626 | 257 | 159 | 11 | 67 | 300 | 72 | 324 | 2.98e-19 | 87.8 |
MsG0180005054.01.T01 | AT1G75930 | 30.337 | 267 | 160 | 9 | 55 | 296 | 18 | 283 | 4.75e-19 | 86.7 |
MsG0180005054.01.T01 | AT1G71250 | 28.295 | 258 | 152 | 10 | 67 | 296 | 42 | 294 | 6.34e-19 | 86.7 |
MsG0180005054.01.T01 | AT1G75920 | 28.889 | 270 | 164 | 11 | 58 | 301 | 21 | 288 | 6.37e-19 | 86.3 |
MsG0180005054.01.T01 | AT2G04020 | 31.553 | 206 | 116 | 9 | 63 | 247 | 40 | 241 | 6.90e-19 | 85.9 |
MsG0180005054.01.T01 | AT1G33811 | 29.070 | 258 | 145 | 10 | 67 | 291 | 35 | 287 | 7.83e-19 | 86.3 |
MsG0180005054.01.T01 | AT2G19060 | 28.980 | 245 | 149 | 8 | 68 | 291 | 32 | 272 | 1.45e-18 | 85.1 |
MsG0180005054.01.T01 | AT5G08460 | 24.149 | 323 | 190 | 13 | 1 | 296 | 12 | 306 | 1.49e-18 | 85.5 |
MsG0180005054.01.T01 | AT5G45950 | 27.239 | 268 | 155 | 12 | 63 | 301 | 37 | 293 | 2.14e-18 | 84.7 |
MsG0180005054.01.T01 | AT1G73610 | 28.832 | 274 | 167 | 11 | 49 | 300 | 21 | 288 | 2.70e-18 | 84.3 |
MsG0180005054.01.T01 | AT3G04290 | 27.273 | 253 | 153 | 9 | 64 | 289 | 27 | 275 | 2.88e-18 | 84.7 |
MsG0180005054.01.T01 | AT3G14220 | 29.108 | 213 | 135 | 9 | 67 | 267 | 33 | 241 | 4.14e-18 | 84.0 |
MsG0180005054.01.T01 | AT2G23540 | 27.575 | 301 | 183 | 13 | 33 | 301 | 15 | 312 | 6.15e-18 | 84.0 |
MsG0180005054.01.T01 | AT1G59406 | 28.777 | 278 | 165 | 11 | 49 | 301 | 15 | 284 | 6.64e-18 | 83.2 |
MsG0180005054.01.T01 | AT1G59030 | 28.777 | 278 | 165 | 11 | 49 | 301 | 15 | 284 | 6.64e-18 | 83.2 |
MsG0180005054.01.T01 | AT1G58725 | 28.777 | 278 | 165 | 11 | 49 | 301 | 15 | 284 | 6.64e-18 | 83.2 |
MsG0180005054.01.T01 | AT5G37690 | 27.907 | 258 | 162 | 8 | 62 | 296 | 23 | 279 | 9.70e-18 | 82.8 |
MsG0180005054.01.T01 | AT5G40990 | 29.344 | 259 | 146 | 10 | 62 | 291 | 33 | 283 | 1.19e-17 | 82.8 |
MsG0180005054.01.T01 | AT3G16370 | 29.845 | 258 | 157 | 11 | 67 | 301 | 31 | 287 | 1.30e-17 | 82.4 |
MsG0180005054.01.T01 | AT5G22810 | 27.675 | 271 | 161 | 12 | 67 | 304 | 35 | 303 | 1.46e-17 | 82.4 |
MsG0180005054.01.T01 | AT3G27950 | 26.217 | 267 | 169 | 8 | 60 | 300 | 26 | 290 | 2.19e-17 | 82.0 |
MsG0180005054.01.T01 | AT3G43550 | 28.571 | 266 | 159 | 10 | 61 | 301 | 25 | 284 | 2.59e-17 | 80.9 |
MsG0180005054.01.T01 | AT1G58520 | 29.588 | 267 | 155 | 11 | 61 | 301 | 25 | 284 | 3.82e-17 | 81.3 |
MsG0180005054.01.T01 | AT1G58525 | 29.588 | 267 | 155 | 11 | 61 | 301 | 25 | 284 | 3.82e-17 | 81.3 |
MsG0180005054.01.T01 | AT4G16230 | 32.828 | 198 | 107 | 8 | 68 | 241 | 32 | 227 | 1.88e-16 | 77.8 |
MsG0180005054.01.T01 | AT2G19050 | 27.686 | 242 | 152 | 8 | 68 | 290 | 33 | 270 | 2.04e-16 | 78.2 |
MsG0180005054.01.T01 | AT1G58430 | 25.769 | 260 | 168 | 7 | 67 | 301 | 36 | 295 | 2.06e-16 | 79.3 |
MsG0180005054.01.T01 | AT2G30310 | 24.621 | 264 | 166 | 7 | 67 | 301 | 35 | 294 | 2.63e-16 | 79.0 |
MsG0180005054.01.T01 | AT2G19050 | 27.686 | 242 | 152 | 8 | 68 | 290 | 33 | 270 | 3.91e-16 | 78.2 |
MsG0180005054.01.T01 | AT2G42990 | 26.296 | 270 | 165 | 10 | 32 | 278 | 4 | 262 | 5.10e-16 | 77.8 |
MsG0180005054.01.T01 | AT3G14225 | 25.100 | 251 | 167 | 8 | 62 | 291 | 33 | 283 | 6.16e-16 | 77.8 |
MsG0180005054.01.T01 | AT1G75880 | 29.344 | 259 | 159 | 8 | 61 | 296 | 47 | 304 | 6.25e-16 | 77.8 |
MsG0180005054.01.T01 | AT1G75900 | 28.846 | 260 | 146 | 11 | 67 | 296 | 44 | 294 | 6.41e-16 | 77.8 |
MsG0180005054.01.T01 | AT2G31540 | 25.091 | 275 | 173 | 8 | 58 | 301 | 23 | 295 | 7.63e-16 | 77.4 |
MsG0180005054.01.T01 | AT1G28600 | 25.651 | 269 | 170 | 7 | 63 | 301 | 28 | 296 | 9.10e-16 | 77.4 |
MsG0180005054.01.T01 | AT3G14225 | 24.706 | 255 | 167 | 8 | 62 | 291 | 33 | 287 | 1.89e-15 | 76.6 |
MsG0180005054.01.T01 | AT1G29660 | 28.346 | 254 | 156 | 10 | 68 | 297 | 34 | 285 | 2.06e-15 | 76.3 |
MsG0180005054.01.T01 | AT5G45670 | 25.882 | 255 | 160 | 9 | 68 | 296 | 31 | 282 | 2.76e-15 | 75.9 |
MsG0180005054.01.T01 | AT1G67830 | 24.206 | 252 | 163 | 3 | 67 | 290 | 31 | 282 | 3.43e-15 | 75.9 |
MsG0180005054.01.T01 | AT5G03590 | 26.549 | 226 | 94 | 7 | 85 | 303 | 7 | 167 | 4.62e-15 | 73.6 |
MsG0180005054.01.T01 | AT2G24560 | 24.555 | 281 | 173 | 10 | 55 | 301 | 19 | 294 | 9.26e-15 | 73.9 |
MsG0180005054.01.T01 | AT2G27360 | 25.092 | 271 | 171 | 7 | 63 | 301 | 30 | 300 | 1.02e-14 | 74.3 |
MsG0180005054.01.T01 | AT3G43570 | 32.178 | 202 | 114 | 7 | 61 | 242 | 25 | 223 | 1.13e-14 | 73.6 |
MsG0180005054.01.T01 | AT5G45910 | 28.736 | 261 | 149 | 9 | 67 | 291 | 31 | 290 | 1.14e-14 | 74.3 |
MsG0180005054.01.T01 | AT1G28650 | 25.095 | 263 | 166 | 8 | 70 | 301 | 41 | 303 | 1.32e-14 | 73.9 |
MsG0180005054.01.T01 | AT5G63170 | 27.027 | 259 | 159 | 11 | 63 | 296 | 25 | 278 | 1.41e-14 | 73.6 |
MsG0180005054.01.T01 | AT2G24560 | 24.199 | 281 | 174 | 10 | 55 | 301 | 19 | 294 | 1.47e-14 | 73.9 |
MsG0180005054.01.T01 | AT1G54790 | 28.244 | 262 | 154 | 11 | 70 | 301 | 36 | 293 | 1.85e-14 | 73.6 |
MsG0180005054.01.T01 | AT2G30220 | 22.692 | 260 | 176 | 7 | 67 | 301 | 34 | 293 | 3.12e-14 | 72.8 |
MsG0180005054.01.T01 | AT3G26430 | 22.305 | 269 | 181 | 4 | 61 | 301 | 26 | 294 | 5.82e-14 | 72.0 |
MsG0180005054.01.T01 | AT1G28670 | 25.941 | 239 | 145 | 7 | 70 | 276 | 39 | 277 | 8.92e-14 | 71.6 |
MsG0180005054.01.T01 | AT4G01130 | 21.933 | 269 | 179 | 6 | 56 | 295 | 24 | 290 | 9.60e-14 | 71.2 |
MsG0180005054.01.T01 | AT1G23500 | 28.458 | 253 | 159 | 7 | 65 | 296 | 34 | 285 | 1.87e-13 | 70.5 |
MsG0180005054.01.T01 | AT4G01130 | 21.933 | 269 | 179 | 6 | 56 | 295 | 24 | 290 | 2.05e-13 | 70.5 |
MsG0180005054.01.T01 | AT1G74460 | 25.483 | 259 | 166 | 8 | 68 | 301 | 25 | 281 | 4.52e-13 | 69.3 |
MsG0180005054.01.T01 | AT1G28640 | 23.954 | 263 | 169 | 7 | 70 | 301 | 39 | 301 | 7.72e-13 | 68.9 |
MsG0180005054.01.T01 | AT1G28580 | 23.574 | 263 | 170 | 8 | 70 | 301 | 41 | 303 | 9.95e-13 | 68.6 |
MsG0180005054.01.T01 | AT4G18970 | 24.904 | 261 | 165 | 8 | 68 | 301 | 30 | 286 | 1.09e-12 | 68.6 |
MsG0180005054.01.T01 | AT1G28570 | 25.185 | 270 | 171 | 10 | 63 | 301 | 31 | 300 | 1.09e-12 | 68.6 |
MsG0180005054.01.T01 | AT4G18970 | 24.904 | 261 | 165 | 8 | 68 | 301 | 30 | 286 | 1.28e-12 | 68.2 |
MsG0180005054.01.T01 | AT1G28590 | 24.723 | 271 | 171 | 7 | 63 | 301 | 33 | 302 | 2.56e-12 | 67.4 |
MsG0180005054.01.T01 | AT1G31550 | 24.715 | 263 | 168 | 8 | 63 | 295 | 33 | 295 | 4.14e-12 | 66.6 |
MsG0180005054.01.T01 | AT1G31550 | 25.410 | 244 | 152 | 8 | 63 | 276 | 33 | 276 | 4.50e-12 | 66.6 |
MsG0180005054.01.T01 | AT5G14450 | 22.388 | 268 | 172 | 8 | 67 | 301 | 42 | 306 | 5.63e-12 | 66.2 |
MsG0180005054.01.T01 | AT1G28600 | 28.161 | 174 | 104 | 5 | 63 | 215 | 28 | 201 | 1.31e-11 | 63.5 |
MsG0180005054.01.T01 | AT1G56670 | 23.288 | 292 | 191 | 8 | 28 | 297 | 11 | 291 | 1.37e-11 | 64.3 |
MsG0180005054.01.T01 | AT1G56670 | 23.288 | 292 | 191 | 8 | 28 | 297 | 11 | 291 | 2.00e-11 | 64.7 |
MsG0180005054.01.T01 | AT4G26790 | 26.423 | 246 | 135 | 9 | 67 | 278 | 30 | 263 | 2.26e-11 | 64.3 |
MsG0180005054.01.T01 | AT4G26790 | 26.423 | 246 | 135 | 9 | 67 | 278 | 30 | 263 | 2.26e-11 | 64.3 |
MsG0180005054.01.T01 | AT3G53100 | 27.381 | 252 | 161 | 8 | 67 | 296 | 30 | 281 | 4.31e-11 | 63.5 |
Find 65 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCAAAATTGTTTGTCTT+TGG | 0.164294 | 1:-86271001 | MsG0180005054.01.T01:CDS |
GCAACATTTGACTATGGTTT+TGG | 0.211646 | 1:+86269688 | None:intergenic |
CTTCAAAATTGTTTGTCTTT+GGG | 0.215101 | 1:-86271000 | MsG0180005054.01.T01:CDS |
CTCCCTTGGCTTATTATAAC+AGG | 0.290477 | 1:-86271151 | MsG0180005054.01.T01:CDS |
TGTTTAGTTGTTGCATAGTT+TGG | 0.326440 | 1:+86269664 | None:intergenic |
TTCTCAATGCATATGGTGTT+GGG | 0.333523 | 1:+86270699 | None:intergenic |
GGATCATATAATCCTCCTTA+TGG | 0.338044 | 1:-86270941 | MsG0180005054.01.T01:CDS |
TTTCTGCATCTTTGCAATTA+CGG | 0.339222 | 1:+86269587 | None:intergenic |
TCTATTTGCACACTCATGTT+AGG | 0.358769 | 1:+86270602 | None:intergenic |
ATTGGTTTATTAGAGCCTAT+TGG | 0.366126 | 1:-86269777 | MsG0180005054.01.T01:CDS |
TTTGGAGCAACATTTGACTA+TGG | 0.376206 | 1:+86269682 | None:intergenic |
GGAATAAACAAAATAGCAAT+TGG | 0.393328 | 1:-86269795 | MsG0180005054.01.T01:CDS |
GCAACATTTGTATTCAAGAA+TGG | 0.395624 | 1:-86270488 | MsG0180005054.01.T01:CDS |
ATTCAAGAATGGGAGCTTGC+AGG | 0.396364 | 1:-86270477 | MsG0180005054.01.T01:intron |
GCAACAACTAAACAAGCAAA+TGG | 0.397354 | 1:-86269655 | MsG0180005054.01.T01:CDS |
TGAGGATTCAAGGTCATGTT+TGG | 0.397860 | 1:+86270544 | None:intergenic |
TTCAAAATTGTTTGTCTTTG+GGG | 0.408086 | 1:-86270999 | MsG0180005054.01.T01:CDS |
ATAAATACTACCAACGTAAT+CGG | 0.408665 | 1:+86270865 | None:intergenic |
AACCTTCCGGCTGGTTTACC+AGG | 0.411061 | 1:+86270908 | None:intergenic |
CAACATTTGTATTCAAGAAT+GGG | 0.431119 | 1:-86270487 | MsG0180005054.01.T01:CDS |
CAAGTGCAATTGAGGATTCA+AGG | 0.438900 | 1:+86270534 | None:intergenic |
GAAGATCTCATAGTTATCAT+AGG | 0.446327 | 1:+86269747 | None:intergenic |
GTGGAATTTCTCAATGCATA+TGG | 0.446801 | 1:+86270692 | None:intergenic |
TTTCTCAATGCATATGGTGT+TGG | 0.450567 | 1:+86270698 | None:intergenic |
CCAGGAAAACTGATTCCATA+AGG | 0.452311 | 1:+86270926 | None:intergenic |
AATTCCACAGAACTACAATA+TGG | 0.459972 | 1:-86270677 | MsG0180005054.01.T01:CDS |
ACAGGTACACATTCTTTGCT+AGG | 0.460442 | 1:-86271133 | MsG0180005054.01.T01:CDS |
CTTAAACGTATTCACGAGTT+GGG | 0.468352 | 1:-86269816 | MsG0180005054.01.T01:CDS |
TCATTGACATTTGCTCTACA+AGG | 0.480295 | 1:+86269841 | None:intergenic |
TCTTAAACGTATTCACGAGT+TGG | 0.489450 | 1:-86269817 | MsG0180005054.01.T01:CDS |
GCAAATGTCGCAGGAGTGGA+AGG | 0.495679 | 1:-86271061 | MsG0180005054.01.T01:CDS |
AAATAATCACTCTTCTCCCT+TGG | 0.497087 | 1:-86271165 | MsG0180005054.01.T01:CDS |
AACTTTGCACATGGAGGGAC+TGG | 0.498125 | 1:-86270650 | MsG0180005054.01.T01:CDS |
ACAGGGAATTTCTTGAACTC+AGG | 0.501576 | 1:-86270962 | MsG0180005054.01.T01:CDS |
ATCATAGGCACACATCCAAT+AGG | 0.510466 | 1:+86269762 | None:intergenic |
GTGTGATGAGTCTTCCAACT+TGG | 0.516033 | 1:-86269715 | MsG0180005054.01.T01:CDS |
CAACAACTAAACAAGCAAAT+GGG | 0.523574 | 1:-86269654 | MsG0180005054.01.T01:CDS |
GAAATTCCCTGTGTCAACAT+AGG | 0.528038 | 1:+86270973 | None:intergenic |
TAATTGCAAAGATGCAGAAA+AGG | 0.529339 | 1:-86269584 | MsG0180005054.01.T01:CDS |
AAGACCGTCGCAGAACCTTC+CGG | 0.534466 | 1:+86270895 | None:intergenic |
CTGATTAATGCAAATGTCGC+AGG | 0.544463 | 1:-86271070 | MsG0180005054.01.T01:CDS |
TCTCAATGCATATGGTGTTG+GGG | 0.548431 | 1:+86270700 | None:intergenic |
AGCGTTAACAAGTGCAATTG+AGG | 0.549860 | 1:+86270526 | None:intergenic |
GTATGAACTTTGCACATGGA+GGG | 0.571948 | 1:-86270655 | MsG0180005054.01.T01:CDS |
CATACCATATTGTAGTTCTG+TGG | 0.576053 | 1:+86270673 | None:intergenic |
CCGTCGCAGAACCTTCCGGC+TGG | 0.576768 | 1:+86270899 | None:intergenic |
CATTGACATTTGCTCTACAA+GGG | 0.577455 | 1:+86269842 | None:intergenic |
AAATGTCGCAGGAGTGGAAG+GGG | 0.578330 | 1:-86271059 | MsG0180005054.01.T01:CDS |
AAGATGCAGAAAAGGCGAGC+TGG | 0.578632 | 1:-86269576 | MsG0180005054.01.T01:CDS |
GGGGACTCCTATGTTGACAC+AGG | 0.583006 | 1:-86270980 | MsG0180005054.01.T01:CDS |
TAATGCAAATGTCGCAGGAG+TGG | 0.591841 | 1:-86271065 | MsG0180005054.01.T01:CDS |
GTACCTGTTATAATAAGCCA+AGG | 0.598418 | 1:+86271148 | None:intergenic |
TCAATTGCACTTGTTAACGC+TGG | 0.601490 | 1:-86270524 | MsG0180005054.01.T01:CDS |
CTTGTCCTCACCGATTACGT+TGG | 0.616912 | 1:-86270875 | MsG0180005054.01.T01:intron |
TTCCTGGTAAACCAGCCGGA+AGG | 0.629014 | 1:-86270910 | MsG0180005054.01.T01:CDS |
ATTGCACTTGTTAACGCTGG+CGG | 0.634075 | 1:-86270521 | MsG0180005054.01.T01:CDS |
CAAATGTCGCAGGAGTGGAA+GGG | 0.645326 | 1:-86271060 | MsG0180005054.01.T01:CDS |
GGGACTCCTATGTTGACACA+GGG | 0.653629 | 1:-86270979 | MsG0180005054.01.T01:CDS |
GGTATGAACTTTGCACATGG+AGG | 0.654144 | 1:-86270656 | MsG0180005054.01.T01:CDS |
GCATCTTTGCAATTACGGAG+AGG | 0.655395 | 1:+86269592 | None:intergenic |
GGAAAACTGATTCCATAAGG+AGG | 0.664847 | 1:+86270929 | None:intergenic |
TACCTGTTATAATAAGCCAA+GGG | 0.673785 | 1:+86271149 | None:intergenic |
TATGGTATGAACTTTGCACA+TGG | 0.677670 | 1:-86270659 | MsG0180005054.01.T01:CDS |
TACTACCAACGTAATCGGTG+AGG | 0.687925 | 1:+86270870 | None:intergenic |
CCAGCCGGAAGGTTCTGCGA+CGG | 0.701370 | 1:-86270899 | MsG0180005054.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACATTTTAATTAGTTTTTTA+TGG | - | Chr1:86270677-86270696 | MsG0180005054.01.T01:CDS | 10.0% |
!!! | ATCTTTTTTTATTTTTCAAA+TGG | + | Chr1:86270349-86270368 | None:intergenic | 10.0% |
!!! | TTTCAATTTTTTCATTTTAT+TGG | - | Chr1:86269650-86269669 | MsG0180005054.01.T01:CDS | 10.0% |
!!! | TTTTTTATGGTATATTAATT+TGG | - | Chr1:86270690-86270709 | MsG0180005054.01.T01:CDS | 10.0% |
!!! | ATTTTTTCATTTTATTGGTT+TGG | - | Chr1:86269655-86269674 | MsG0180005054.01.T01:CDS | 15.0% |
!!! | GTTCTTTTTTTTTTTTTGTA+AGG | - | Chr1:86270609-86270628 | MsG0180005054.01.T01:CDS | 15.0% |
!! | AAAAGATGAGAATAGAATTT+AGG | - | Chr1:86270390-86270409 | MsG0180005054.01.T01:intron | 20.0% |
!! | AGTTTCACATAAATCAAATA+TGG | - | Chr1:86270740-86270759 | MsG0180005054.01.T01:intron | 20.0% |
!! | GGTTAATAAACTTCATTTAA+TGG | - | Chr1:86270771-86270790 | MsG0180005054.01.T01:intron | 20.0% |
!! | TTAAATTTGAGAAGAAGTTA+AGG | - | Chr1:86270430-86270449 | MsG0180005054.01.T01:intron | 20.0% |
!! | TTCTCTATGACATATTTATT+TGG | - | Chr1:86270581-86270600 | MsG0180005054.01.T01:CDS | 20.0% |
!!! | AGTTTTTAGTTTTATGATAG+AGG | + | Chr1:86270720-86270739 | None:intergenic | 20.0% |
!!! | TCTTTCTTTTGTTTTTAGTT+CGG | - | Chr1:86270642-86270661 | MsG0180005054.01.T01:CDS | 20.0% |
!!! | TTTTTTTTTTGTAAGGAGTT+TGG | - | Chr1:86270616-86270635 | MsG0180005054.01.T01:CDS | 20.0% |
! | ATAAATACTACCAACGTAAT+CGG | + | Chr1:86269897-86269916 | None:intergenic | 25.0% |
! | CAACATTTGTATTCAAGAAT+GGG | - | Chr1:86270272-86270291 | MsG0180005054.01.T01:intron | 25.0% |
! | CTTCAAAATTGTTTGTCTTT+GGG | - | Chr1:86269759-86269778 | MsG0180005054.01.T01:CDS | 25.0% |
! | GGAATAAACAAAATAGCAAT+TGG | - | Chr1:86270964-86270983 | MsG0180005054.01.T01:CDS | 25.0% |
! | TCTTCAAAATTGTTTGTCTT+TGG | - | Chr1:86269758-86269777 | MsG0180005054.01.T01:CDS | 25.0% |
! | TTCAAAATTGTTTGTCTTTG+GGG | - | Chr1:86269760-86269779 | MsG0180005054.01.T01:CDS | 25.0% |
!! | ATTTTCAATACTTTGGTTGA+TGG | - | Chr1:86270133-86270152 | MsG0180005054.01.T01:intron | 25.0% |
!!! | CTTTCTTTTGTTTTTAGTTC+GGG | - | Chr1:86270643-86270662 | MsG0180005054.01.T01:CDS | 25.0% |
!!! | TGGGGATTTTATTTTCAAAA+AGG | + | Chr1:86270044-86270063 | None:intergenic | 25.0% |
AAATCAAATATGGACTCAAG+TGG | - | Chr1:86270750-86270769 | MsG0180005054.01.T01:intron | 30.0% | |
AATTCCACAGAACTACAATA+TGG | - | Chr1:86270082-86270101 | MsG0180005054.01.T01:intron | 30.0% | |
ATACTAAATCATTTCGAACG+AGG | + | Chr1:86269944-86269963 | None:intergenic | 30.0% | |
ATTTGAGAAGAAGTTAAGGA+AGG | - | Chr1:86270434-86270453 | MsG0180005054.01.T01:intron | 30.0% | |
CAACAACTAAACAAGCAAAT+GGG | - | Chr1:86271105-86271124 | MsG0180005054.01.T01:CDS | 30.0% | |
GAAATCGAACTCAAATTCTT+CGG | + | Chr1:86270806-86270825 | None:intergenic | 30.0% | |
GAAGATCTCATAGTTATCAT+AGG | + | Chr1:86271015-86271034 | None:intergenic | 30.0% | |
GCAACATTTGTATTCAAGAA+TGG | - | Chr1:86270271-86270290 | MsG0180005054.01.T01:intron | 30.0% | |
TAATTGCAAAGATGCAGAAA+AGG | - | Chr1:86271175-86271194 | MsG0180005054.01.T01:CDS | 30.0% | |
TACCTGTTATAATAAGCCAA+GGG | + | Chr1:86269613-86269632 | None:intergenic | 30.0% | |
TGTTTAGTTGTTGCATAGTT+TGG | + | Chr1:86271098-86271117 | None:intergenic | 30.0% | |
TTTCTGCATCTTTGCAATTA+CGG | + | Chr1:86271175-86271194 | None:intergenic | 30.0% | |
! | AAAATCAGTTTTCATGACAC+TGG | - | Chr1:86271128-86271147 | MsG0180005054.01.T01:CDS | 30.0% |
! | ATTGGTTTATTAGAGCCTAT+TGG | - | Chr1:86270982-86271001 | MsG0180005054.01.T01:CDS | 30.0% |
! | CAACATTTGACTATGGTTTT+GGG | + | Chr1:86271073-86271092 | None:intergenic | 30.0% |
! | GACTGGTATTTTCAATACTT+TGG | - | Chr1:86270126-86270145 | MsG0180005054.01.T01:intron | 30.0% |
!!! | TCGACTTTTGTTTTTCTTTG+TGG | - | Chr1:86270869-86270888 | MsG0180005054.01.T01:intron | 30.0% |
AAATAATCACTCTTCTCCCT+TGG | - | Chr1:86269594-86269613 | MsG0180005054.01.T01:CDS | 35.0% | |
CATTGACATTTGCTCTACAA+GGG | + | Chr1:86270920-86270939 | None:intergenic | 35.0% | |
CTTAAACGTATTCACGAGTT+GGG | - | Chr1:86270943-86270962 | MsG0180005054.01.T01:CDS | 35.0% | |
GCAACAACTAAACAAGCAAA+TGG | - | Chr1:86271104-86271123 | MsG0180005054.01.T01:CDS | 35.0% | |
GGATCATATAATCCTCCTTA+TGG | - | Chr1:86269818-86269837 | MsG0180005054.01.T01:CDS | 35.0% | |
GTACCTGTTATAATAAGCCA+AGG | + | Chr1:86269614-86269633 | None:intergenic | 35.0% | |
GTGGAATTTCTCAATGCATA+TGG | + | Chr1:86270070-86270089 | None:intergenic | 35.0% | |
TATGGTATGAACTTTGCACA+TGG | - | Chr1:86270100-86270119 | MsG0180005054.01.T01:intron | 35.0% | |
TCATTGACATTTGCTCTACA+AGG | + | Chr1:86270921-86270940 | None:intergenic | 35.0% | |
TCTATTTGCACACTCATGTT+AGG | + | Chr1:86270160-86270179 | None:intergenic | 35.0% | |
TCTTAAACGTATTCACGAGT+TGG | - | Chr1:86270942-86270961 | MsG0180005054.01.T01:CDS | 35.0% | |
TTCTCAATGCATATGGTGTT+GGG | + | Chr1:86270063-86270082 | None:intergenic | 35.0% | |
TTTCTCAATGCATATGGTGT+TGG | + | Chr1:86270064-86270083 | None:intergenic | 35.0% | |
! | CATACCATATTGTAGTTCTG+TGG | + | Chr1:86270089-86270108 | None:intergenic | 35.0% |
! | GCAACATTTGACTATGGTTT+TGG | + | Chr1:86271074-86271093 | None:intergenic | 35.0% |
! | TTTGGAGCAACATTTGACTA+TGG | + | Chr1:86271080-86271099 | None:intergenic | 35.0% |
!!! | CTTTTGTTTTTCTTTGTGGC+AGG | - | Chr1:86270873-86270892 | MsG0180005054.01.T01:intron | 35.0% |
ACAGGGAATTTCTTGAACTC+AGG | - | Chr1:86269797-86269816 | MsG0180005054.01.T01:CDS | 40.0% | |
ACAGGTACACATTCTTTGCT+AGG | - | Chr1:86269626-86269645 | MsG0180005054.01.T01:CDS | 40.0% | |
AGCGTTAACAAGTGCAATTG+AGG | + | Chr1:86270236-86270255 | None:intergenic | 40.0% | |
ATCATAGGCACACATCCAAT+AGG | + | Chr1:86271000-86271019 | None:intergenic | 40.0% | |
CAAGTGCAATTGAGGATTCA+AGG | + | Chr1:86270228-86270247 | None:intergenic | 40.0% | |
CTCCCTTGGCTTATTATAAC+AGG | - | Chr1:86269608-86269627 | MsG0180005054.01.T01:CDS | 40.0% | |
CTGATTAATGCAAATGTCGC+AGG | - | Chr1:86269689-86269708 | MsG0180005054.01.T01:CDS | 40.0% | |
GAAATTCCCTGTGTCAACAT+AGG | + | Chr1:86269789-86269808 | None:intergenic | 40.0% | |
GTATGAACTTTGCACATGGA+GGG | - | Chr1:86270104-86270123 | MsG0180005054.01.T01:intron | 40.0% | |
TGAGGATTCAAGGTCATGTT+TGG | + | Chr1:86270218-86270237 | None:intergenic | 40.0% | |
! | CCAGGAAAACTGATTCCATA+AGG | + | Chr1:86269836-86269855 | None:intergenic | 40.0% |
! | CCTTATGGAATCAGTTTTCC+TGG | - | Chr1:86269833-86269852 | MsG0180005054.01.T01:CDS | 40.0% |
! | GGAAAACTGATTCCATAAGG+AGG | + | Chr1:86269833-86269852 | None:intergenic | 40.0% |
! | TCAATTGCACTTGTTAACGC+TGG | - | Chr1:86270235-86270254 | MsG0180005054.01.T01:intron | 40.0% |
! | TCTCAATGCATATGGTGTTG+GGG | + | Chr1:86270062-86270081 | None:intergenic | 40.0% |
!!! | ATGGTTTTGGGAAACCAAGT+TGG | + | Chr1:86271061-86271080 | None:intergenic | 40.0% |
ATTCAAGAATGGGAGCTTGC+AGG | - | Chr1:86270282-86270301 | MsG0180005054.01.T01:intron | 45.0% | |
GAAGGGGCTAAAAAGTCACA+TGG | - | Chr1:86269716-86269735 | MsG0180005054.01.T01:CDS | 45.0% | |
GCATCTTTGCAATTACGGAG+AGG | + | Chr1:86271170-86271189 | None:intergenic | 45.0% | |
GGTATGAACTTTGCACATGG+AGG | - | Chr1:86270103-86270122 | MsG0180005054.01.T01:intron | 45.0% | |
GTGTGATGAGTCTTCCAACT+TGG | - | Chr1:86271044-86271063 | MsG0180005054.01.T01:CDS | 45.0% | |
TAATGCAAATGTCGCAGGAG+TGG | - | Chr1:86269694-86269713 | MsG0180005054.01.T01:CDS | 45.0% | |
TACTACCAACGTAATCGGTG+AGG | + | Chr1:86269892-86269911 | None:intergenic | 45.0% | |
! | AGTTTTCCTGGTAAACCAGC+CGG | - | Chr1:86269845-86269864 | MsG0180005054.01.T01:CDS | 45.0% |
! | ATTGCACTTGTTAACGCTGG+CGG | - | Chr1:86270238-86270257 | MsG0180005054.01.T01:intron | 45.0% |
AAATGTCGCAGGAGTGGAAG+GGG | - | Chr1:86269700-86269719 | MsG0180005054.01.T01:CDS | 50.0% | |
AACTTTGCACATGGAGGGAC+TGG | - | Chr1:86270109-86270128 | MsG0180005054.01.T01:intron | 50.0% | |
AAGATGCAGAAAAGGCGAGC+TGG | - | Chr1:86271183-86271202 | MsG0180005054.01.T01:CDS | 50.0% | |
CAAATGTCGCAGGAGTGGAA+GGG | - | Chr1:86269699-86269718 | MsG0180005054.01.T01:CDS | 50.0% | |
GGGACTCCTATGTTGACACA+GGG | - | Chr1:86269780-86269799 | MsG0180005054.01.T01:CDS | 50.0% | |
! | CTTGTCCTCACCGATTACGT+TGG | - | Chr1:86269884-86269903 | MsG0180005054.01.T01:intron | 50.0% |
AAGACCGTCGCAGAACCTTC+CGG | + | Chr1:86269867-86269886 | None:intergenic | 55.0% | |
AATGGGAGCTTGCAGGTGAG+TGG | - | Chr1:86270289-86270308 | MsG0180005054.01.T01:intron | 55.0% | |
GCAAATGTCGCAGGAGTGGA+AGG | - | Chr1:86269698-86269717 | MsG0180005054.01.T01:CDS | 55.0% | |
GGGGACTCCTATGTTGACAC+AGG | - | Chr1:86269779-86269798 | MsG0180005054.01.T01:CDS | 55.0% | |
TTCCTGGTAAACCAGCCGGA+AGG | - | Chr1:86269849-86269868 | MsG0180005054.01.T01:CDS | 55.0% | |
!! | AACCTTCCGGCTGGTTTACC+AGG | + | Chr1:86269854-86269873 | None:intergenic | 55.0% |
CCAGCCGGAAGGTTCTGCGA+CGG | - | Chr1:86269860-86269879 | MsG0180005054.01.T01:CDS | 65.0% | |
CCGTCGCAGAACCTTCCGGC+TGG | + | Chr1:86269863-86269882 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 86269569 | 86271212 | 86269569 | ID=MsG0180005054.01;Name=MsG0180005054.01 |
Chr1 | mRNA | 86269569 | 86271212 | 86269569 | ID=MsG0180005054.01.T01;Parent=MsG0180005054.01;Name=MsG0180005054.01.T01;_AED=0.49;_eAED=0.49;_QI=0|1|0.33|1|1|1|3|0|306 |
Chr1 | exon | 86270876 | 86271212 | 86270876 | ID=MsG0180005054.01.T01:exon:28419;Parent=MsG0180005054.01.T01 |
Chr1 | exon | 86270478 | 86270743 | 86270478 | ID=MsG0180005054.01.T01:exon:28418;Parent=MsG0180005054.01.T01 |
Chr1 | exon | 86269569 | 86269886 | 86269569 | ID=MsG0180005054.01.T01:exon:28417;Parent=MsG0180005054.01.T01 |
Chr1 | CDS | 86270876 | 86271212 | 86270876 | ID=MsG0180005054.01.T01:cds;Parent=MsG0180005054.01.T01 |
Chr1 | CDS | 86270478 | 86270743 | 86270478 | ID=MsG0180005054.01.T01:cds;Parent=MsG0180005054.01.T01 |
Chr1 | CDS | 86269569 | 86269886 | 86269569 | ID=MsG0180005054.01.T01:cds;Parent=MsG0180005054.01.T01 |
Gene Sequence |
Protein sequence |