AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045790.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045790.01.T01 MTR_8g079050 99.202 376 3 0 1 376 1 376 0.0 759
MsG0880045790.01.T01 MTR_4g122200 51.099 364 168 4 10 373 12 365 7.06e-130 377
MsG0880045790.01.T01 MTR_2g033920 49.555 337 164 3 37 373 35 365 5.18e-113 334
MsG0880045790.01.T01 MTR_2g033930 48.538 342 158 5 37 373 32 360 9.87e-112 331
MsG0880045790.01.T01 MTR_1g069175 40.120 334 195 4 37 370 33 361 9.25e-82 254
MsG0880045790.01.T01 MTR_7g116570 39.779 362 207 7 15 376 16 366 2.64e-81 253
MsG0880045790.01.T01 MTR_3g005650 40.548 365 196 8 15 376 11 357 7.53e-81 251
MsG0880045790.01.T01 MTR_4g035353 37.741 363 219 5 14 376 8 363 8.18e-81 252
MsG0880045790.01.T01 MTR_5g078210 40.173 346 192 9 14 358 6 337 1.26e-80 251
MsG0880045790.01.T01 MTR_2g033920 48.689 267 131 3 37 303 35 295 2.51e-80 249
MsG0880045790.01.T01 MTR_7g116520 37.401 377 219 10 3 376 4 366 3.25e-80 250
MsG0880045790.01.T01 MTR_7g116500 38.398 362 209 9 13 373 14 362 4.64e-79 247
MsG0880045790.01.T01 MTR_1g024890 38.310 355 210 7 17 370 12 358 1.04e-78 246
MsG0880045790.01.T01 MTR_7g116510 39.071 366 210 9 12 376 5 358 2.71e-78 245
MsG0880045790.01.T01 MTR_3g098270 36.193 373 228 6 4 373 1 366 1.52e-77 244
MsG0880045790.01.T01 MTR_4g108690 40.683 322 180 8 39 358 29 341 1.63e-77 243
MsG0880045790.01.T01 MTR_7g008060 38.674 362 197 9 10 370 9 346 3.87e-77 242
MsG0880045790.01.T01 MTR_3g435540 39.752 322 183 8 39 358 25 337 3.48e-76 240
MsG0880045790.01.T01 MTR_1g079540 37.571 354 212 7 18 370 12 357 2.32e-75 238
MsG0880045790.01.T01 MTR_4g019880 36.785 367 218 9 10 373 8 363 2.78e-75 238
MsG0880045790.01.T01 MTR_6g021530 37.190 363 219 8 16 376 7 362 1.51e-74 236
MsG0880045790.01.T01 MTR_8g087890 36.464 362 205 8 27 376 15 363 1.57e-72 230
MsG0880045790.01.T01 MTR_1g079530 40.000 340 191 8 37 376 29 355 1.60e-72 230
MsG0880045790.01.T01 MTR_5g093090 37.209 344 197 8 37 373 28 359 1.52e-70 225
MsG0880045790.01.T01 MTR_3g052480 37.398 369 205 11 16 373 12 365 2.28e-70 225
MsG0880045790.01.T01 MTR_3g052490 37.097 372 209 10 14 376 11 366 1.12e-69 223
MsG0880045790.01.T01 MTR_3g024510 36.578 339 206 5 39 376 40 370 4.06e-69 222
MsG0880045790.01.T01 MTR_0565s0010 35.294 374 232 7 4 376 1 365 5.84e-69 221
MsG0880045790.01.T01 MTR_3g052580 35.135 370 216 10 10 373 7 358 3.86e-67 217
MsG0880045790.01.T01 MTR_3g005660 40.118 339 190 10 39 373 38 367 3.99e-67 217
MsG0880045790.01.T01 MTR_3g052580 35.135 370 216 10 10 373 6 357 6.44e-67 217
MsG0880045790.01.T01 MTR_5g084750 34.831 356 219 6 4 358 1 344 5.08e-66 213
MsG0880045790.01.T01 MTR_3g082830 35.494 324 198 7 37 358 38 352 2.18e-64 209
MsG0880045790.01.T01 MTR_1g025780 34.085 355 222 6 11 365 15 357 1.88e-63 207
MsG0880045790.01.T01 MTR_5g084790 34.262 359 218 8 2 359 6 347 3.16e-63 206
MsG0880045790.01.T01 MTR_2g100620 35.312 320 197 6 41 358 35 346 1.91e-62 204
MsG0880045790.01.T01 MTR_8g014910 33.046 348 222 7 13 358 9 347 1.36e-61 202
MsG0880045790.01.T01 MTR_8g075230 34.844 353 217 7 8 359 11 351 1.69e-61 202
MsG0880045790.01.T01 MTR_1g025720 35.045 331 204 7 29 357 29 350 1.71e-61 202
MsG0880045790.01.T01 MTR_5g078210 40.206 291 161 8 14 303 6 284 1.88e-61 201
MsG0880045790.01.T01 MTR_5g009100 32.143 336 220 6 39 373 48 376 3.88e-61 201
MsG0880045790.01.T01 MTR_3g464730 32.113 355 226 9 6 358 2 343 2.91e-60 198
MsG0880045790.01.T01 MTR_2g044100 35.092 379 211 13 12 373 14 374 3.16e-60 199
MsG0880045790.01.T01 MTR_1g025760 33.237 346 214 9 9 348 50 384 2.01e-59 197
MsG0880045790.01.T01 MTR_2g084585 33.994 353 221 7 6 358 4 344 7.83e-59 194
MsG0880045790.01.T01 MTR_1g025700 35.207 338 205 8 15 349 28 354 1.74e-58 194
MsG0880045790.01.T01 MTR_8g074570 33.154 371 223 9 13 373 14 369 8.57e-58 192
MsG0880045790.01.T01 MTR_5g074270 35.328 351 212 10 11 357 9 348 1.55e-57 192
MsG0880045790.01.T01 MTR_5g022640 32.213 357 216 7 12 359 20 359 4.27e-57 191
MsG0880045790.01.T01 MTR_1g025680 33.423 371 219 9 11 376 8 355 9.64e-57 192
MsG0880045790.01.T01 MTR_5g084770 33.832 334 211 6 27 358 18 343 1.24e-55 186
MsG0880045790.01.T01 MTR_8g087870 33.623 345 204 8 12 354 7 328 1.72e-54 183
MsG0880045790.01.T01 MTR_5g022630 31.728 353 230 7 12 359 14 360 1.84e-54 184
MsG0880045790.01.T01 MTR_0009s0250 33.058 363 218 11 13 373 11 350 1.97e-54 183
MsG0880045790.01.T01 MTR_3g114090 30.854 363 233 8 10 365 3 354 2.87e-54 183
MsG0880045790.01.T01 MTR_8g022790 33.613 357 190 11 36 376 36 361 1.09e-53 181
MsG0880045790.01.T01 MTR_4g056280 33.143 350 222 6 10 358 6 344 1.16e-53 181
MsG0880045790.01.T01 MTR_8g075220 32.530 332 216 4 31 359 34 360 6.49e-53 179
MsG0880045790.01.T01 MTR_8g075200 31.081 370 234 7 16 374 16 375 1.04e-52 180
MsG0880045790.01.T01 MTR_2g015080 31.025 361 227 11 9 356 10 361 7.63e-52 177
MsG0880045790.01.T01 MTR_8g074560 31.536 371 236 9 11 373 5 365 1.42e-51 176
MsG0880045790.01.T01 MTR_3g114120 32.907 313 200 6 37 348 47 350 1.47e-51 176
MsG0880045790.01.T01 MTR_3g023220 34.808 339 194 10 39 373 35 350 2.35e-51 175
MsG0880045790.01.T01 MTR_2g017955 32.075 371 222 12 16 375 8 359 2.94e-51 176
MsG0880045790.01.T01 MTR_2g017965 32.249 369 228 13 12 375 9 360 1.13e-50 174
MsG0880045790.01.T01 MTR_2g017925 31.915 376 230 13 4 375 1 354 1.18e-50 174
MsG0880045790.01.T01 MTR_4g087985 32.464 345 212 11 28 360 27 362 1.28e-50 174
MsG0880045790.01.T01 MTR_3g021460 31.250 368 226 11 9 373 4 347 1.28e-50 173
MsG0880045790.01.T01 MTR_4g056160 32.184 348 214 9 17 358 13 344 6.29e-50 171
MsG0880045790.01.T01 MTR_2g461580 31.395 344 212 9 32 373 26 347 1.19e-48 168
MsG0880045790.01.T01 MTR_2g017875 31.565 377 238 11 4 376 1 361 2.55e-47 165
MsG0880045790.01.T01 MTR_1g025910 31.507 365 238 5 11 372 7 362 7.36e-47 164
MsG0880045790.01.T01 MTR_2g017915 30.749 374 215 12 6 375 5 338 1.83e-46 162
MsG0880045790.01.T01 MTR_8g074580 28.261 414 239 8 7 373 14 416 6.94e-45 160
MsG0880045790.01.T01 MTR_8g022810 32.565 347 210 11 37 373 41 373 1.42e-44 158
MsG0880045790.01.T01 MTR_8g031420 29.199 387 234 14 4 375 1 362 4.31e-44 156
MsG0880045790.01.T01 MTR_5g093090 35.145 276 161 7 37 305 28 292 9.70e-44 154
MsG0880045790.01.T01 MTR_6g007100 31.551 374 204 15 6 361 10 349 1.12e-42 152
MsG0880045790.01.T01 MTR_8g031430 28.608 388 237 13 4 375 1 364 3.51e-42 151
MsG0880045790.01.T01 MTR_0127s0040 35.537 242 133 8 146 373 3 235 4.30e-42 147
MsG0880045790.01.T01 MTR_8g031390 28.010 382 240 13 4 372 1 360 3.75e-40 146
MsG0880045790.01.T01 MTR_6g007090 31.472 394 209 13 1 361 1 366 2.09e-39 144
MsG0880045790.01.T01 MTR_8g031400 26.873 387 245 13 4 375 1 364 2.23e-38 141
MsG0880045790.01.T01 MTR_8g089805 28.421 380 222 13 11 360 15 374 3.04e-38 141
MsG0880045790.01.T01 MTR_7g033150 29.508 366 201 12 30 360 28 371 5.24e-38 140
MsG0880045790.01.T01 MTR_5g083040 29.503 322 211 7 33 347 28 340 6.98e-38 140
MsG0880045790.01.T01 MTR_5g087690 29.912 341 206 9 26 355 37 355 2.78e-36 136
MsG0880045790.01.T01 MTR_7g033155 29.471 397 214 13 9 360 10 385 7.94e-36 135
MsG0880045790.01.T01 MTR_7g116870 27.249 378 227 13 10 361 8 363 2.79e-35 133
MsG0880045790.01.T01 MTR_8g038680 31.043 393 204 15 1 360 1 359 1.19e-34 131
MsG0880045790.01.T01 MTR_7g087190 28.084 381 227 12 10 360 15 378 1.34e-34 132
MsG0880045790.01.T01 MTR_1g030275 29.443 377 216 15 11 360 15 368 5.73e-33 127
MsG0880045790.01.T01 MTR_1g030268 28.646 384 229 14 2 360 6 369 2.38e-32 125
MsG0880045790.01.T01 MTR_8g028160 29.752 363 214 14 39 376 38 384 2.95e-32 125
MsG0880045790.01.T01 MTR_8g031390 28.182 330 207 11 4 325 1 308 2.95e-32 124
MsG0880045790.01.T01 MTR_1g030340 27.851 377 224 12 12 360 18 374 3.51e-32 125
MsG0880045790.01.T01 MTR_1g030220 27.807 374 228 12 13 360 14 371 6.64e-32 124
MsG0880045790.01.T01 MTR_1g079590 36.702 188 114 4 29 216 23 205 1.02e-31 119
MsG0880045790.01.T01 MTR_6g007095 28.499 393 210 15 6 361 10 368 1.27e-31 126
MsG0880045790.01.T01 MTR_6g007095 27.989 368 217 14 14 361 345 684 1.52e-29 120
MsG0880045790.01.T01 MTR_1g082390 27.966 354 199 13 37 358 31 360 1.06e-30 120
MsG0880045790.01.T01 MTR_7g113860 29.121 364 199 14 37 367 29 366 1.09e-30 120
MsG0880045790.01.T01 MTR_1g030230 28.775 351 204 11 37 360 32 363 3.79e-30 119
MsG0880045790.01.T01 MTR_2g087292 28.177 362 168 12 13 373 11 281 1.33e-29 115
MsG0880045790.01.T01 MTR_7g033165 29.775 356 195 15 37 360 33 365 4.48e-29 116
MsG0880045790.01.T01 MTR_2g018015 36.715 207 126 3 30 236 29 230 5.55e-29 114
MsG0880045790.01.T01 MTR_7g113860 27.877 391 222 15 10 367 9 372 6.44e-29 116
MsG0880045790.01.T01 MTR_8g089805 26.441 295 175 9 98 360 22 306 1.08e-28 114
MsG0880045790.01.T01 MTR_8g022810 28.818 347 170 13 37 373 41 320 1.47e-28 114
MsG0880045790.01.T01 MTR_7g111780 29.091 330 208 10 39 359 38 350 5.99e-28 113
MsG0880045790.01.T01 MTR_2g015580 28.125 384 235 16 13 376 23 385 2.74e-27 111
MsG0880045790.01.T01 MTR_2g043980 28.117 377 207 14 10 360 8 346 4.98e-27 110
MsG0880045790.01.T01 MTR_5g074210 39.716 141 83 2 218 357 65 204 5.47e-27 107
MsG0880045790.01.T01 MTR_1108s0010 29.032 217 137 4 143 358 3 203 7.42e-27 106
MsG0880045790.01.T01 MTR_2g079090 27.568 370 222 13 10 360 2 344 6.19e-26 107
MsG0880045790.01.T01 MTR_3g438030 28.125 384 226 17 10 366 2 362 8.16e-26 107
MsG0880045790.01.T01 MTR_2g015590 26.230 366 232 15 15 360 13 360 1.36e-25 106
MsG0880045790.01.T01 MTR_1g092690 27.950 322 186 14 39 347 53 341 1.37e-25 106
MsG0880045790.01.T01 MTR_8g012540 29.909 331 190 13 1 314 1 306 2.63e-25 105
MsG0880045790.01.T01 MTR_5g093090 34.225 187 108 6 37 216 28 206 2.64e-25 102
MsG0880045790.01.T01 MTR_7g113860 28.214 280 159 9 116 367 33 298 3.09e-25 104
MsG0880045790.01.T01 MTR_2g079080 27.568 370 222 13 10 360 2 344 3.34e-25 105
MsG0880045790.01.T01 MTR_1g030265 27.891 294 169 10 98 360 55 336 3.48e-25 105
MsG0880045790.01.T01 MTR_3g463960 26.598 391 227 15 12 360 1 373 6.02e-25 105
MsG0880045790.01.T01 MTR_3g463950 26.598 391 227 15 12 360 1 373 6.02e-25 105
MsG0880045790.01.T01 MTR_3g463970 26.598 391 227 15 12 360 1 373 6.02e-25 105
MsG0880045790.01.T01 MTR_3g463940 26.598 391 227 15 12 360 1 373 6.02e-25 105
MsG0880045790.01.T01 MTR_3g463930 26.683 401 221 16 12 360 1 380 1.56e-24 103
MsG0880045790.01.T01 MTR_0029s0050 27.568 370 222 13 10 360 2 344 2.63e-24 102
MsG0880045790.01.T01 MTR_3g069780 27.676 383 227 17 11 366 3 362 3.22e-24 102
MsG0880045790.01.T01 MTR_2g015650 27.763 371 230 15 12 360 5 359 7.62e-24 101
MsG0880045790.01.T01 MTR_0029s0100 27.568 370 222 13 10 360 2 344 9.72e-24 101
MsG0880045790.01.T01 MTR_4g104240 26.879 346 207 15 39 361 41 363 1.00e-23 101
MsG0880045790.01.T01 MTR_2g015630 27.577 359 213 16 42 376 36 371 3.02e-23 100
MsG0880045790.01.T01 MTR_2g017925 26.038 265 176 10 113 375 5 251 3.99e-23 97.8
MsG0880045790.01.T01 MTR_1g060490 25.938 320 198 14 39 348 39 329 5.71e-23 99.0
MsG0880045790.01.T01 MTR_7g111780 28.462 260 167 6 109 359 2 251 9.64e-23 96.7
MsG0880045790.01.T01 MTR_7g104220 26.168 321 197 14 39 348 44 335 3.10e-22 97.1
MsG0880045790.01.T01 MTR_1g079570 34.307 137 88 2 237 373 4 138 4.72e-22 91.7
MsG0880045790.01.T01 MTR_7g033165 30.175 285 154 13 37 298 33 295 2.16e-21 94.0
MsG0880045790.01.T01 MTR_1g092760 26.087 322 193 14 39 347 41 330 9.01e-21 92.8
MsG0880045790.01.T01 MTR_4g036375 31.551 187 121 4 10 196 6 185 1.11e-20 89.4
MsG0880045790.01.T01 MTR_1g092740 24.845 322 197 12 39 347 40 329 1.32e-20 92.4
MsG0880045790.01.T01 MTR_1g060500 23.739 337 218 12 39 361 42 353 4.56e-20 90.9
MsG0880045790.01.T01 MTR_1g030268 27.673 318 194 13 2 303 6 303 6.21e-20 90.1
MsG0880045790.01.T01 MTR_1g092750 25.466 322 196 13 39 347 42 332 1.72e-19 89.0
MsG0880045790.01.T01 MTR_3g069520 27.273 385 224 18 11 366 3 360 1.87e-18 86.3
MsG0880045790.01.T01 MTR_8g062580 34.483 116 75 1 240 355 64 178 2.08e-17 81.3
MsG0880045790.01.T01 MTR_6g049220 47.917 96 48 1 37 132 30 123 2.42e-16 76.6
MsG0880045790.01.T01 MTR_2g017895 23.906 297 187 8 86 376 4 267 9.69e-15 73.9
MsG0880045790.01.T01 MTR_6g049230 31.061 132 83 2 212 339 67 194 8.10e-14 70.1
MsG0880045790.01.T01 MTR_5g084880 32.710 107 68 1 197 303 10 112 9.69e-14 68.6
MsG0880045790.01.T01 MTR_4g036385 27.523 109 79 0 250 358 20 128 1.97e-11 61.6
MsG0880045790.01.T01 MTR_2g043990 25.397 315 168 14 10 303 70 338 2.95e-11 64.3
MsG0880045790.01.T01 MTR_4g056220 30.189 106 74 0 253 358 76 181 5.32e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045790.01.T01 AT2G23540 74.728 368 91 1 11 376 20 387 0.0 576
MsG0880045790.01.T01 AT3G50400 66.310 374 125 1 4 376 1 374 0.0 531
MsG0880045790.01.T01 AT5G41890 43.429 350 183 7 37 376 31 375 4.69e-96 291
MsG0880045790.01.T01 AT5G15720 41.983 343 188 7 37 376 30 364 1.86e-83 258
MsG0880045790.01.T01 AT5G08460 40.921 369 209 7 11 376 23 385 9.78e-83 257
MsG0880045790.01.T01 AT4G28780 35.501 369 229 6 10 376 2 363 1.10e-80 251
MsG0880045790.01.T01 AT4G16230 51.793 251 111 4 13 259 3 247 1.31e-80 247
MsG0880045790.01.T01 AT1G71691 40.882 340 190 6 37 376 55 383 9.83e-80 249
MsG0880045790.01.T01 AT3G04290 38.420 367 214 7 4 370 1 355 1.89e-78 246
MsG0880045790.01.T01 AT5G37690 37.822 349 205 8 11 358 2 339 3.22e-78 245
MsG0880045790.01.T01 AT5G18430 37.640 356 211 6 15 370 12 356 1.63e-77 243
MsG0880045790.01.T01 AT5G33370 37.741 363 215 8 11 373 8 359 3.46e-77 243
MsG0880045790.01.T01 AT1G29670 38.617 347 197 9 12 356 10 342 5.69e-75 237
MsG0880045790.01.T01 AT1G74460 39.489 352 188 10 12 358 6 337 2.01e-74 235
MsG0880045790.01.T01 AT1G29670 38.028 355 207 9 4 356 67 410 3.93e-74 237
MsG0880045790.01.T01 AT4G18970 39.359 343 192 8 39 376 30 361 5.61e-74 234
MsG0880045790.01.T01 AT1G29660 38.889 342 194 6 39 376 34 364 1.61e-73 233
MsG0880045790.01.T01 AT1G71250 35.215 372 234 5 2 373 6 370 2.81e-73 233
MsG0880045790.01.T01 AT4G18970 39.118 340 197 6 39 376 30 361 3.32e-73 234
MsG0880045790.01.T01 AT5G37690 36.103 349 203 8 11 358 2 331 6.11e-72 228
MsG0880045790.01.T01 AT5G45670 38.824 340 198 6 39 376 31 362 7.78e-72 229
MsG0880045790.01.T01 AT1G33811 36.436 376 221 11 11 376 3 370 1.04e-66 216
MsG0880045790.01.T01 AT5G03820 35.393 356 217 9 6 358 4 349 1.62e-63 207
MsG0880045790.01.T01 AT5G55050 35.860 343 202 9 39 373 41 373 2.03e-63 207
MsG0880045790.01.T01 AT5G03820 35.393 356 217 9 6 358 32 377 5.09e-63 206
MsG0880045790.01.T01 AT4G10950 32.941 340 216 7 37 373 71 401 5.80e-63 207
MsG0880045790.01.T01 AT1G71691 38.889 288 168 5 89 376 3 282 2.63e-62 201
MsG0880045790.01.T01 AT5G15720 38.621 290 171 6 90 376 48 333 1.06e-61 201
MsG0880045790.01.T01 AT5G03810 35.494 324 199 7 37 358 30 345 1.84e-61 201
MsG0880045790.01.T01 AT5G22810 35.043 351 215 8 12 358 10 351 5.42e-61 201
MsG0880045790.01.T01 AT5G15720 42.701 274 147 6 37 307 30 296 1.19e-60 198
MsG0880045790.01.T01 AT4G10950 32.941 340 212 8 37 373 71 397 3.32e-60 199
MsG0880045790.01.T01 AT1G75900 33.238 349 222 5 11 359 20 357 4.23e-60 198
MsG0880045790.01.T01 AT1G75880 33.889 360 223 7 9 365 24 371 6.01e-60 198
MsG0880045790.01.T01 AT3G16370 34.568 324 202 6 37 358 30 345 8.33e-59 194
MsG0880045790.01.T01 AT2G42990 34.877 324 200 8 37 358 28 342 1.82e-58 194
MsG0880045790.01.T01 AT2G04570 32.386 352 221 6 9 359 8 343 3.73e-58 193
MsG0880045790.01.T01 AT1G75880 33.426 359 225 8 9 365 24 370 7.20e-58 193
MsG0880045790.01.T01 AT4G26790 32.923 325 211 4 37 361 29 346 1.79e-56 188
MsG0880045790.01.T01 AT4G26790 32.923 325 211 4 37 361 29 346 1.79e-56 188
MsG0880045790.01.T01 AT1G71120 34.551 356 204 12 27 373 20 355 3.97e-56 188
MsG0880045790.01.T01 AT2G30310 35.759 316 192 8 37 349 34 341 7.98e-56 187
MsG0880045790.01.T01 AT1G06990 30.556 360 230 8 11 359 3 353 8.91e-56 187
MsG0880045790.01.T01 AT1G71691 40.824 267 148 5 37 303 55 311 9.01e-56 186
MsG0880045790.01.T01 AT1G59406 34.986 363 206 12 12 368 10 348 2.85e-55 185
MsG0880045790.01.T01 AT1G59030 34.986 363 206 12 12 368 10 348 2.85e-55 185
MsG0880045790.01.T01 AT1G58725 34.986 363 206 12 12 368 10 348 2.85e-55 185
MsG0880045790.01.T01 AT3G53100 33.746 323 205 5 37 358 29 343 1.01e-54 184
MsG0880045790.01.T01 AT3G14820 31.092 357 228 7 12 365 8 349 1.27e-54 184
MsG0880045790.01.T01 AT2G30220 35.849 318 189 9 37 349 33 340 7.17e-54 182
MsG0880045790.01.T01 AT5G45960 32.132 333 211 8 31 357 41 364 3.94e-53 181
MsG0880045790.01.T01 AT1G58430 33.544 316 199 8 37 349 35 342 2.74e-52 178
MsG0880045790.01.T01 AT5G42170 31.761 318 207 4 41 358 54 361 4.18e-52 177
MsG0880045790.01.T01 AT2G31540 33.333 327 204 9 37 359 35 351 8.06e-52 177
MsG0880045790.01.T01 AT2G40250 33.129 326 203 7 35 354 34 350 1.63e-51 176
MsG0880045790.01.T01 AT5G33370 33.645 321 203 7 11 331 8 318 3.57e-51 174
MsG0880045790.01.T01 AT1G75890 30.337 356 233 8 14 365 22 366 7.66e-51 174
MsG0880045790.01.T01 AT1G75890 30.337 356 233 8 14 365 51 395 1.52e-50 174
MsG0880045790.01.T01 AT2G19060 34.091 352 206 14 15 360 5 336 3.96e-50 172
MsG0880045790.01.T01 AT1G58520 34.384 349 193 13 30 368 19 341 6.62e-50 171
MsG0880045790.01.T01 AT1G58525 34.384 349 193 13 30 368 19 341 6.62e-50 171
MsG0880045790.01.T01 AT2G24560 32.808 317 200 8 37 349 34 341 8.52e-50 171
MsG0880045790.01.T01 AT1G75890 29.620 368 233 9 14 365 22 379 1.34e-49 171
MsG0880045790.01.T01 AT5G63170 34.848 330 184 10 26 349 17 321 1.46e-49 170
MsG0880045790.01.T01 AT1G20120 32.622 328 208 5 37 361 78 395 5.65e-49 170
MsG0880045790.01.T01 AT4G30140 33.728 338 195 13 39 373 35 346 3.63e-48 167
MsG0880045790.01.T01 AT1G20132 31.045 335 217 7 37 369 61 383 5.20e-48 167
MsG0880045790.01.T01 AT2G19050 32.249 338 208 9 39 376 33 349 1.25e-47 165
MsG0880045790.01.T01 AT1G53920 31.461 356 211 11 33 373 44 381 1.82e-47 166
MsG0880045790.01.T01 AT2G03980 33.333 330 187 12 37 354 43 351 2.26e-47 165
MsG0880045790.01.T01 AT2G03980 33.333 330 187 12 37 354 43 351 2.26e-47 165
MsG0880045790.01.T01 AT2G03980 33.333 330 187 12 37 354 43 351 2.26e-47 165
MsG0880045790.01.T01 AT2G03980 33.333 330 187 12 37 354 43 351 2.26e-47 165
MsG0880045790.01.T01 AT5G45950 31.818 330 208 10 29 356 32 346 1.07e-46 163
MsG0880045790.01.T01 AT3G43570 31.680 363 191 12 12 368 8 319 1.15e-46 162
MsG0880045790.01.T01 AT1G73610 31.285 358 213 10 12 362 9 340 1.79e-46 162
MsG0880045790.01.T01 AT1G75920 32.102 352 212 10 14 359 6 336 2.20e-46 162
MsG0880045790.01.T01 AT5G40990 31.519 349 218 9 37 376 37 373 1.28e-45 160
MsG0880045790.01.T01 AT3G14225 30.899 356 225 10 32 376 32 377 1.03e-44 158
MsG0880045790.01.T01 AT1G20135 32.551 341 206 8 10 349 5 322 3.05e-44 156
MsG0880045790.01.T01 AT2G19010 28.846 364 224 12 1 360 2 334 1.42e-43 154
MsG0880045790.01.T01 AT3G14225 30.791 354 224 10 32 376 32 373 1.55e-43 155
MsG0880045790.01.T01 AT1G75920 31.063 367 211 11 14 359 1 346 2.90e-43 154
MsG0880045790.01.T01 AT2G19010 28.846 364 224 12 1 360 32 364 4.47e-43 154
MsG0880045790.01.T01 AT4G16233 52.381 126 60 0 251 376 5 130 1.73e-42 145
MsG0880045790.01.T01 AT1G20130 29.730 333 216 5 35 358 182 505 5.56e-42 154
MsG0880045790.01.T01 AT1G20130 29.377 337 220 5 31 358 198 525 6.50e-42 154
MsG0880045790.01.T01 AT1G23500 31.445 353 215 7 12 363 16 342 1.05e-41 149
MsG0880045790.01.T01 AT1G53990 30.526 380 230 13 11 376 5 364 3.68e-41 149
MsG0880045790.01.T01 AT1G53940 30.000 350 222 10 37 376 39 375 3.07e-40 146
MsG0880045790.01.T01 AT3G43550 34.333 300 174 11 10 303 4 286 3.76e-40 144
MsG0880045790.01.T01 AT1G75910 32.523 329 196 10 37 359 28 336 6.96e-40 145
MsG0880045790.01.T01 AT1G75930 32.857 350 209 11 15 358 6 335 1.57e-38 141
MsG0880045790.01.T01 AT2G24560 32.472 271 171 7 37 303 34 296 1.15e-37 138
MsG0880045790.01.T01 AT2G19050 34.127 252 152 6 39 290 33 270 1.95e-37 136
MsG0880045790.01.T01 AT1G75920 29.310 348 196 9 14 359 6 305 3.25e-37 137
MsG0880045790.01.T01 AT1G54000 28.307 378 238 12 4 373 2 354 6.05e-37 138
MsG0880045790.01.T01 AT3G26430 31.092 357 191 14 37 360 31 365 7.21e-37 137
MsG0880045790.01.T01 AT1G54020 26.075 372 245 13 6 373 1 346 8.70e-37 137
MsG0880045790.01.T01 AT1G54010 28.571 378 237 14 4 373 2 354 5.84e-35 132
MsG0880045790.01.T01 AT1G75920 31.148 305 183 10 61 359 25 308 7.47e-35 130
MsG0880045790.01.T01 AT3G27950 29.679 374 218 14 12 361 6 358 1.61e-33 128
MsG0880045790.01.T01 AT4G01130 26.943 386 231 13 7 364 9 371 7.48e-33 127
MsG0880045790.01.T01 AT1G54030 26.393 341 211 11 39 373 54 360 2.26e-32 126
MsG0880045790.01.T01 AT5G14450 29.462 353 200 13 37 360 41 373 5.81e-32 124
MsG0880045790.01.T01 AT1G67830 28.571 357 214 11 30 360 23 364 9.99e-32 123
MsG0880045790.01.T01 AT3G14210 28.324 346 214 11 37 373 36 356 1.61e-31 123
MsG0880045790.01.T01 AT2G04020 29.878 328 169 11 37 359 43 314 4.94e-31 120
MsG0880045790.01.T01 AT3G05180 28.371 356 210 12 32 360 31 368 6.39e-31 121
MsG0880045790.01.T01 AT2G04020 35.266 207 116 5 37 239 43 235 8.54e-31 118
MsG0880045790.01.T01 AT1G54790 29.124 388 214 17 11 367 12 369 1.13e-30 120
MsG0880045790.01.T01 AT3G62280 28.986 345 204 13 41 369 40 359 4.79e-30 119
MsG0880045790.01.T01 AT2G31550 30.288 208 136 5 153 357 8 209 7.44e-30 114
MsG0880045790.01.T01 AT4G16220 49.618 131 55 3 1 131 1 120 1.35e-29 114
MsG0880045790.01.T01 AT3G14220 25.948 343 220 12 39 373 34 350 1.27e-28 115
MsG0880045790.01.T01 AT1G54790 28.453 362 204 15 37 367 31 368 2.63e-28 114
MsG0880045790.01.T01 AT1G53940 29.889 271 174 8 37 303 39 297 2.11e-27 110
MsG0880045790.01.T01 AT4G01130 26.027 292 181 8 101 364 1 285 1.19e-26 108
MsG0880045790.01.T01 AT1G28650 30.105 382 221 18 14 368 10 372 2.18e-26 109
MsG0880045790.01.T01 AT1G28580 28.919 370 226 14 13 360 12 366 3.28e-26 108
MsG0880045790.01.T01 AT1G56670 28.571 336 205 14 39 359 42 357 4.52e-26 108
MsG0880045790.01.T01 AT1G31550 29.412 340 205 13 41 360 40 364 2.46e-25 106
MsG0880045790.01.T01 AT3G48460 26.844 339 216 14 39 360 40 363 6.65e-25 105
MsG0880045790.01.T01 AT2G27360 28.169 355 217 15 41 373 37 375 1.00e-24 104
MsG0880045790.01.T01 AT1G28570 28.418 373 226 14 12 360 8 363 1.53e-24 103
MsG0880045790.01.T01 AT1G28600 29.446 343 201 15 41 360 35 359 1.83e-24 103
MsG0880045790.01.T01 AT1G54020 25.795 283 184 11 94 373 1 260 2.01e-24 101
MsG0880045790.01.T01 AT1G54020 25.795 283 184 11 94 373 1 260 2.01e-24 101
MsG0880045790.01.T01 AT1G54020 25.795 283 184 11 94 373 1 260 2.01e-24 101
MsG0880045790.01.T01 AT1G28640 29.143 350 206 16 41 367 39 369 2.17e-24 103
MsG0880045790.01.T01 AT3G09930 27.358 318 199 12 39 347 41 335 8.73e-24 101
MsG0880045790.01.T01 AT3G09930 27.358 318 199 12 39 347 41 335 8.73e-24 101
MsG0880045790.01.T01 AT5G03610 23.967 363 221 14 12 347 4 338 1.04e-23 101
MsG0880045790.01.T01 AT5G45910 30.362 359 201 18 39 368 32 370 3.61e-23 99.8
MsG0880045790.01.T01 AT1G54790 26.546 388 204 16 37 367 31 394 3.95e-23 100
MsG0880045790.01.T01 AT1G28590 29.855 345 198 14 41 360 40 365 6.17e-23 99.8
MsG0880045790.01.T01 AT1G54020 27.830 212 142 6 165 373 8 211 1.38e-22 95.5
MsG0880045790.01.T01 AT1G28610 28.693 352 214 14 30 360 24 359 3.85e-22 97.1
MsG0880045790.01.T01 AT1G54030 26.838 272 159 11 39 301 54 294 1.09e-21 94.7
MsG0880045790.01.T01 AT1G09390 26.647 334 214 11 39 359 39 354 1.19e-21 95.5
MsG0880045790.01.T01 AT1G31550 28.319 339 207 13 41 360 40 361 1.20e-21 95.9
MsG0880045790.01.T01 AT3G14210 29.730 222 141 7 160 373 14 228 8.14e-21 91.3
MsG0880045790.01.T01 AT1G28670 27.684 354 209 18 41 368 39 371 1.04e-20 93.2
MsG0880045790.01.T01 AT1G28660 28.779 344 203 15 41 360 39 364 3.80e-20 91.3
MsG0880045790.01.T01 AT1G28660 28.779 344 202 15 41 360 39 363 1.35e-19 89.7
MsG0880045790.01.T01 AT4G01130 24.920 313 196 11 7 303 9 298 1.99e-19 88.6
MsG0880045790.01.T01 AT3G62280 26.545 275 167 10 41 303 40 291 1.61e-16 79.7
MsG0880045790.01.T01 AT5G03600 24.058 345 225 14 10 347 22 336 8.59e-16 78.2
MsG0880045790.01.T01 AT5G03600 24.367 316 202 14 39 347 16 301 2.15e-15 76.6
MsG0880045790.01.T01 AT1G56670 27.174 276 170 12 39 303 42 297 3.22e-14 73.2
MsG0880045790.01.T01 AT1G28570 27.273 209 135 7 163 360 89 291 2.04e-12 67.8
MsG0880045790.01.T01 AT1G28570 27.179 195 125 7 177 360 12 200 1.31e-11 64.3

Find 90 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAAGTGTTATAACATTT+TGG 0.178715 8:+64501065 MsG0880045790.01.T01:CDS
ACGATATGATTAATCATTTC+AGG 0.195942 8:+64502197 MsG0880045790.01.T01:CDS
ACTGGGAAATCAATACTTTA+TGG 0.211081 8:+64501803 MsG0880045790.01.T01:CDS
TAGGAGCTTCTTTCATCTTT+GGG 0.218613 8:+64501154 MsG0880045790.01.T01:CDS
TTAGGAGCTTCTTTCATCTT+TGG 0.223861 8:+64501153 MsG0880045790.01.T01:CDS
CTATCTTTCAACTCTTTCTA+AGG 0.238915 8:+64501206 MsG0880045790.01.T01:CDS
TTTCATCTTTGGGGACTCTT+TGG 0.239268 8:+64501164 MsG0880045790.01.T01:CDS
GATGCTAGAAAATTTGTTAT+AGG 0.272569 8:+64502365 MsG0880045790.01.T01:CDS
AGAAATGGGACAGCATAATT+TGG 0.283867 8:-64501767 None:intergenic
TCAATTGATTGATAGTCTTT+TGG 0.309142 8:-64502418 None:intergenic
ACGACAGAGACTTTACAAAA+TGG 0.326255 8:+64502343 MsG0880045790.01.T01:intron
AAACAAATTGACAAACTTCT+AGG 0.330114 8:+64502034 MsG0880045790.01.T01:CDS
ACATATCTCCTGTCAATCTT+AGG 0.345112 8:+64502991 MsG0880045790.01.T01:CDS
ATCTGGGCTTTGAGAAATTC+TGG 0.345388 8:-64502164 None:intergenic
ATAGGTACAAGCATGTGTTT+TGG 0.355827 8:+64502898 MsG0880045790.01.T01:CDS
CACTCTATACTTAAAAGAAA+AGG 0.358408 8:-64503195 None:intergenic
AGTAGAGCATGCTGTGGAAA+TGG 0.362266 8:+64502822 MsG0880045790.01.T01:CDS
GTTGCATTTGGTGCTAGAAA+TGG 0.365791 8:-64501782 None:intergenic
ACTCTATACTTAAAAGAAAA+GGG 0.373604 8:-64503194 None:intergenic
CATCTTTGGGGACTCTTTGG+TGG 0.377772 8:+64501167 MsG0880045790.01.T01:CDS
ATATCGTCTACGAAAGCATC+TGG 0.384711 8:-64502181 None:intergenic
TGTTACTTGAGTGCTTCATT+AGG 0.391467 8:+64501012 MsG0880045790.01.T01:five_prime_UTR
ATAATTGTTGAGAAAATCAT+TGG 0.399400 8:-64502116 None:intergenic
GTAGAGCATGCTGTGGAAAT+GGG 0.404605 8:+64502823 MsG0880045790.01.T01:CDS
TTTCTAGCACCAAATGCAAC+TGG 0.408856 8:+64501785 MsG0880045790.01.T01:CDS
GCAGCTTCACTTGGATGGTA+TGG 0.409314 8:-64502924 None:intergenic
ATTGATTTCCCAGTTGCATT+TGG 0.412573 8:-64501794 None:intergenic
TGGTAAGGTATACATCCTAT+TGG 0.416841 8:-64502398 None:intergenic
TGTCAATCTTAGGCAACTTC+GGG 0.423469 8:+64503001 MsG0880045790.01.T01:CDS
GGGGACTCTTTGGTGGATGC+AGG 0.424049 8:+64501174 MsG0880045790.01.T01:CDS
ATAGGTAACGTTGGGCCAAT+AGG 0.429060 8:+64502383 MsG0880045790.01.T01:CDS
GCAAGGACAAACGTTGCTCC+AGG 0.436468 8:-64502533 None:intergenic
TATGGAGTTAATTATGCCTC+AGG 0.440947 8:+64501821 MsG0880045790.01.T01:CDS
TTGCATTTGGTGCTAGAAAT+GGG 0.441394 8:-64501781 None:intergenic
AGAACCATTGGTGATTTAGT+AGG 0.441987 8:+64501300 MsG0880045790.01.T01:CDS
CTGTCAATCTTAGGCAACTT+CGG 0.446113 8:+64503000 MsG0880045790.01.T01:CDS
GGAGGAATTCTGAATGCAAC+TGG 0.447843 8:+64501848 MsG0880045790.01.T01:CDS
GGCTTTAAAATCAATTCCAT+TGG 0.449664 8:-64501241 None:intergenic
CTTCAAGTATATGCAATGAT+AGG 0.456148 8:+64502880 MsG0880045790.01.T01:CDS
ATCACCAATGGTTCTTCCAT+TGG 0.461518 8:-64501292 None:intergenic
GTTAGATGTGTACCGTTAGT+TGG 0.466706 8:-64502222 None:intergenic
CTTCTTCCAGTTCTTTCTGT+CGG 0.467424 8:+64502139 MsG0880045790.01.T01:CDS
CGATATGATTAATCATTTCA+GGG 0.484868 8:+64502198 MsG0880045790.01.T01:CDS
CTGGCTCCGACAGAAAGAAC+TGG 0.488435 8:-64502145 None:intergenic
TGGTTCTTCCATTGGTGTAA+CGG 0.492719 8:-64501284 None:intergenic
GTTAATTATGCCTCAGGAGG+AGG 0.493461 8:+64501827 MsG0880045790.01.T01:CDS
TCATTGCATATACTTGAAGT+TGG 0.494507 8:-64502876 None:intergenic
GCTTTAAAATCAATTCCATT+GGG 0.499149 8:-64501240 None:intergenic
GTCTCCATCGAGTAGCTGCT+TGG 0.499672 8:-64502961 None:intergenic
TCAATACAATGGTCGATTGA+AGG 0.502544 8:+64502481 MsG0880045790.01.T01:CDS
CGAAGTTGCCTAAGATTGAC+AGG 0.511302 8:-64502999 None:intergenic
TGTTGGCAGCTTCACTTGGA+TGG 0.514990 8:-64502929 None:intergenic
GCCTCTGGTGGAAATCCTAC+TGG 0.518455 8:+64501261 MsG0880045790.01.T01:CDS
ATTATGTTGGCAGCTTCACT+TGG 0.530699 8:-64502933 None:intergenic
ATCATTGGCCCCAACAGTGA+TGG 0.536278 8:-64502101 None:intergenic
AATTTGTTATAGGTAACGTT+GGG 0.536311 8:+64502375 MsG0880045790.01.T01:CDS
GAGCTAAATGACAATCTCCC+TGG 0.545624 8:+64502515 MsG0880045790.01.T01:CDS
AATTATGCCTCAGGAGGAGG+AGG 0.545847 8:+64501830 MsG0880045790.01.T01:CDS
AGGAGCTTCTTTCATCTTTG+GGG 0.551342 8:+64501155 MsG0880045790.01.T01:CDS
TTAAAATCAATTCCATTGGG+AGG 0.555084 8:-64501237 None:intergenic
ATACTTGAAGTTGGTCCACA+TGG 0.555332 8:-64502867 None:intergenic
TCAGGTGAATAGGATAGGAA+TGG 0.557177 8:+64501979 MsG0880045790.01.T01:intron
CTTGTAGAGAATGAAAGCTA+TGG 0.558665 8:+64501041 MsG0880045790.01.T01:exon
TACACCAATGGAAGAACCAT+TGG 0.561198 8:+64501288 MsG0880045790.01.T01:CDS
CTGCTTGGCGATGATTATGT+TGG 0.561275 8:-64502946 None:intergenic
ATCGCCAAGCAGCTACTCGA+TGG 0.574203 8:+64502957 MsG0880045790.01.T01:CDS
TTCTAGCACCAAATGCAACT+GGG 0.575990 8:+64501786 MsG0880045790.01.T01:CDS
CCTACTGGCCGTTACACCAA+TGG 0.577527 8:+64501276 MsG0880045790.01.T01:CDS
AAGGCAAACATTCCTCCCAA+TGG 0.579551 8:+64501225 MsG0880045790.01.T01:CDS
AAATTTGTTATAGGTAACGT+TGG 0.579683 8:+64502374 MsG0880045790.01.T01:CDS
TCATTTCAGGGGCCAACTAA+CGG 0.580813 8:+64502210 MsG0880045790.01.T01:CDS
TAGAGCATGCTGTGGAAATG+GGG 0.586061 8:+64502824 MsG0880045790.01.T01:CDS
CAGAATTCCTCCTCCTCCTG+AGG 0.598616 8:-64501837 None:intergenic
CCATTGGTGTAACGGCCAGT+AGG 0.600370 8:-64501276 None:intergenic
CTCTATACTTAAAAGAAAAG+GGG 0.600466 8:-64503193 None:intergenic
CAAGGACAAACGTTGCTCCA+GGG 0.604558 8:-64502532 None:intergenic
AGAGCATGCTGTGGAAATGG+GGG 0.610094 8:+64502825 MsG0880045790.01.T01:CDS
TATCGTCTACGAAAGCATCT+GGG 0.611017 8:-64502180 None:intergenic
GATATGATTAATCATTTCAG+GGG 0.615205 8:+64502199 MsG0880045790.01.T01:CDS
GGAGTTAATTATGCCTCAGG+AGG 0.618312 8:+64501824 MsG0880045790.01.T01:CDS
ATTACCTACTAAATCACCAA+TGG 0.619869 8:-64501304 None:intergenic
AAACTTGCAATTCAATACAA+TGG 0.628495 8:+64502470 MsG0880045790.01.T01:CDS
ATTTGTCTACAATTATGTTG+TGG 0.630627 8:+64503121 MsG0880045790.01.T01:three_prime_UTR
ATTGAATGAAGATGAATGTG+TGG 0.649371 8:+64502436 MsG0880045790.01.T01:CDS
GCCAGTAGGATTTCCACCAG+AGG 0.662085 8:-64501262 None:intergenic
CTAAATCATAGACATTTGCA+AGG 0.673451 8:-64502550 None:intergenic
AAATGTCTATGATTTAGTGA+TGG 0.673846 8:+64502556 MsG0880045790.01.T01:CDS
ACATCAAGTAGAGCATGCTG+TGG 0.680085 8:+64502816 MsG0880045790.01.T01:CDS
GAGCATGCTGTGGAAATGGG+GGG 0.687846 8:+64502826 MsG0880045790.01.T01:CDS
TTTGCAGGGATAATTCCATG+TGG 0.740257 8:+64502852 MsG0880045790.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATCATAGTAAAATAAA+AGG - Chr8:64502764-64502783 None:intergenic 10.0%
!!! TAATTATCTATGTTTTTTTT+AGG + Chr8:64501728-64501747 MsG0880045790.01.T01:intron 10.0%
!! AAATCAACTAAAATTAACTA+TGG - Chr8:64501584-64501603 None:intergenic 15.0%
!! ATAATGAATGATTAAGAAAT+AGG - Chr8:64501908-64501927 None:intergenic 15.0%
!! TTAGATTTAGATTAAGAATA+AGG - Chr8:64502247-64502266 None:intergenic 15.0%
!!! TAATTTATTTGAAATTGTGT+AGG + Chr8:64502786-64502805 MsG0880045790.01.T01:intron 15.0%
!! ACTCTATACTTAAAAGAAAA+GGG - Chr8:64503197-64503216 None:intergenic 20.0%
!! AGTACATATGTATAGAATTA+TGG + Chr8:64502643-64502662 MsG0880045790.01.T01:intron 20.0%
!! ATAATTGTTGAGAAAATCAT+TGG - Chr8:64502119-64502138 None:intergenic 20.0%
!! ATCATAGAATCAAAAACAAA+AGG - Chr8:64503090-64503109 None:intergenic 20.0%
!! CATTCAAAACCAAAAATATA+AGG - Chr8:64501092-64501111 None:intergenic 20.0%
!! TCATAGAATCAAAAACAAAA+GGG - Chr8:64503089-64503108 None:intergenic 20.0%
!!! ACTAGACTTTATTTATCTTT+CGG + Chr8:64502290-64502309 MsG0880045790.01.T01:intron 20.0%
!!! ATTGAAGTGTTATAACATTT+TGG + Chr8:64501065-64501084 MsG0880045790.01.T01:CDS 20.0%
!!! CTTTTTTAAAGTGAATAAGT+GGG - Chr8:64501501-64501520 None:intergenic 20.0%
!!! TAATGGATTATTACATTTTC+AGG + Chr8:64501961-64501980 MsG0880045790.01.T01:intron 20.0%
!!! TTTCTTTGTTTCTACTAATT+CGG + Chr8:64501332-64501351 MsG0880045790.01.T01:intron 20.0%
!!! TTTTTTAAAGTGAATAAGTG+GGG - Chr8:64501500-64501519 None:intergenic 20.0%
! AAAAAAAAACAGTCGAGATT+TGG + Chr8:64501549-64501568 MsG0880045790.01.T01:intron 25.0%
! AAAAAAAGACGATATACGAA+TGG - Chr8:64501648-64501667 None:intergenic 25.0%
! AAACAAATTGACAAACTTCT+AGG + Chr8:64502034-64502053 MsG0880045790.01.T01:CDS 25.0%
! AAACTTGCAATTCAATACAA+TGG + Chr8:64502470-64502489 MsG0880045790.01.T01:CDS 25.0%
! AAATGTCTATGATTTAGTGA+TGG + Chr8:64502556-64502575 MsG0880045790.01.T01:CDS 25.0%
! ACGATATGATTAATCATTTC+AGG + Chr8:64502197-64502216 MsG0880045790.01.T01:CDS 25.0%
! ATGATTAAGAAATAGGAACA+AGG - Chr8:64501901-64501920 None:intergenic 25.0%
! ATTTGTCTACAATTATGTTG+TGG + Chr8:64503121-64503140 MsG0880045790.01.T01:three_prime_UTR 25.0%
! CAACTAAAATTAACTATGGT+CGG - Chr8:64501580-64501599 None:intergenic 25.0%
! CACTCTATACTTAAAAGAAA+AGG - Chr8:64503198-64503217 None:intergenic 25.0%
! CGATATGATTAATCATTTCA+GGG + Chr8:64502198-64502217 MsG0880045790.01.T01:CDS 25.0%
! CTCTATACTTAAAAGAAAAG+GGG - Chr8:64503196-64503215 None:intergenic 25.0%
! GAGATTTGATTGTATAACTA+TGG - Chr8:64501363-64501382 None:intergenic 25.0%
! GATATGATTAATCATTTCAG+GGG + Chr8:64502199-64502218 MsG0880045790.01.T01:CDS 25.0%
! TAATAATCCATTACATGTCA+TGG - Chr8:64501954-64501973 None:intergenic 25.0%
! TGATTAAGAAATAGGAACAA+GGG - Chr8:64501900-64501919 None:intergenic 25.0%
! TTATTTATCTTTCGGTCAAA+CGG + Chr8:64502298-64502317 MsG0880045790.01.T01:intron 25.0%
!! CCACTTATTCACTTTAAAAA+AGG + Chr8:64501499-64501518 MsG0880045790.01.T01:intron 25.0%
!!! AAATTTGTTATAGGTAACGT+TGG + Chr8:64502374-64502393 MsG0880045790.01.T01:CDS 25.0%
!!! AATTTGTTATAGGTAACGTT+GGG + Chr8:64502375-64502394 MsG0880045790.01.T01:CDS 25.0%
!!! ATCTATGTTTTTTTTAGGAG+AGG + Chr8:64501733-64501752 MsG0880045790.01.T01:intron 25.0%
!!! CATTTTGGTCCTTATATTTT+TGG + Chr8:64501080-64501099 MsG0880045790.01.T01:CDS 25.0%
!!! CCTTTTTTAAAGTGAATAAG+TGG - Chr8:64501502-64501521 None:intergenic 25.0%
!!! GATGCTAGAAAATTTGTTAT+AGG + Chr8:64502365-64502384 MsG0880045790.01.T01:CDS 25.0%
!!! GCTTTAAAATCAATTCCATT+GGG - Chr8:64501243-64501262 None:intergenic 25.0%
!!! GTCAATTTGTTTTCTTGTTA+TGG - Chr8:64502026-64502045 None:intergenic 25.0%
!!! TATTACATTTTCAGGTGAAT+AGG + Chr8:64501969-64501988 MsG0880045790.01.T01:intron 25.0%
!!! TCAATTGATTGATAGTCTTT+TGG - Chr8:64502421-64502440 None:intergenic 25.0%
!!! TTTTTTTTAGGAGAGGAATT+GGG + Chr8:64501740-64501759 MsG0880045790.01.T01:intron 25.0%
AAGATTGACGATGAATTTGT+CGG - Chr8:64502725-64502744 None:intergenic 30.0%
ACAAAATCTCAACTGTTAGA+CGG - Chr8:64501404-64501423 None:intergenic 30.0%
ACATGCAATTGTTATATGCA+GGG + Chr8:64501452-64501471 MsG0880045790.01.T01:intron 30.0%
ACTGGGAAATCAATACTTTA+TGG + Chr8:64501803-64501822 MsG0880045790.01.T01:CDS 30.0%
ATTACCTACTAAATCACCAA+TGG - Chr8:64501307-64501326 None:intergenic 30.0%
ATTGAATGAAGATGAATGTG+TGG + Chr8:64502436-64502455 MsG0880045790.01.T01:CDS 30.0%
ATTTGTTCCATGACATGTAA+TGG + Chr8:64501944-64501963 MsG0880045790.01.T01:intron 30.0%
CTAAATCATAGACATTTGCA+AGG - Chr8:64502553-64502572 None:intergenic 30.0%
CTATCTTTCAACTCTTTCTA+AGG + Chr8:64501206-64501225 MsG0880045790.01.T01:CDS 30.0%
CTTCAAGTATATGCAATGAT+AGG + Chr8:64502880-64502899 MsG0880045790.01.T01:CDS 30.0%
GTTGTACTAGCTCAAAAAAA+TGG + Chr8:64501129-64501148 MsG0880045790.01.T01:CDS 30.0%
TCATTGCATATACTTGAAGT+TGG - Chr8:64502879-64502898 None:intergenic 30.0%
TTAAAATCAATTCCATTGGG+AGG - Chr8:64501240-64501259 None:intergenic 30.0%
! TACATCATTCCTTCTTTTGT+CGG - Chr8:64501672-64501691 None:intergenic 30.0%
!! GGCTTTAAAATCAATTCCAT+TGG - Chr8:64501244-64501263 None:intergenic 30.0%
!! GTTTTGAATGTGAGCTTTTA+TGG + Chr8:64501102-64501121 MsG0880045790.01.T01:CDS 30.0%
!! TGATTGATAGTCTTTTGGTA+AGG - Chr8:64502416-64502435 None:intergenic 30.0%
!!! GTTTTTTTTAGGAGAGGAAT+TGG + Chr8:64501739-64501758 MsG0880045790.01.T01:intron 30.0%
!!! TTTTTTGTCAAGTACTCTAG+TGG - Chr8:64501535-64501554 None:intergenic 30.0%
AAAAGGGAAAAACGTGTGTA+TGG - Chr8:64503073-64503092 None:intergenic 35.0%
ACATATCTCCTGTCAATCTT+AGG + Chr8:64502991-64503010 MsG0880045790.01.T01:CDS 35.0%
ACGACAGAGACTTTACAAAA+TGG + Chr8:64502343-64502362 MsG0880045790.01.T01:intron 35.0%
AGAAATGGGACAGCATAATT+TGG - Chr8:64501770-64501789 None:intergenic 35.0%
CATGCAATTGTTATATGCAG+GGG + Chr8:64501453-64501472 MsG0880045790.01.T01:intron 35.0%
CGATATACGAATGGTTTGAT+TGG - Chr8:64501639-64501658 None:intergenic 35.0%
CTAGCTCAAAAAAATGGCTT+AGG + Chr8:64501135-64501154 MsG0880045790.01.T01:CDS 35.0%
CTTGTAGAGAATGAAAGCTA+TGG + Chr8:64501041-64501060 MsG0880045790.01.T01:exon 35.0%
GACATGCAATTGTTATATGC+AGG + Chr8:64501451-64501470 MsG0880045790.01.T01:intron 35.0%
TAGGAGCTTCTTTCATCTTT+GGG + Chr8:64501154-64501173 MsG0880045790.01.T01:CDS 35.0%
TATGGAGTTAATTATGCCTC+AGG + Chr8:64501821-64501840 MsG0880045790.01.T01:CDS 35.0%
TCAATACAATGGTCGATTGA+AGG + Chr8:64502481-64502500 MsG0880045790.01.T01:CDS 35.0%
TCGACAAAATTACAGTGACA+TGG + Chr8:64502671-64502690 MsG0880045790.01.T01:intron 35.0%
TGGTAAGGTATACATCCTAT+TGG - Chr8:64502401-64502420 None:intergenic 35.0%
TTAGGAGCTTCTTTCATCTT+TGG + Chr8:64501153-64501172 MsG0880045790.01.T01:CDS 35.0%
! AAAAACAGTCGAGATTTGGT+TGG + Chr8:64501553-64501572 MsG0880045790.01.T01:intron 35.0%
! AATTTTCTCCATCACTGTTG+GGG + Chr8:64502093-64502112 MsG0880045790.01.T01:CDS 35.0%
! ACATCATTCCTTCTTTTGTC+GGG - Chr8:64501671-64501690 None:intergenic 35.0%
! AGAACCATTGGTGATTTAGT+AGG + Chr8:64501300-64501319 MsG0880045790.01.T01:CDS 35.0%
! ATAGGTACAAGCATGTGTTT+TGG + Chr8:64502898-64502917 MsG0880045790.01.T01:CDS 35.0%
! ATTGATTTCCCAGTTGCATT+TGG - Chr8:64501797-64501816 None:intergenic 35.0%
! CAATTTTCTCCATCACTGTT+GGG + Chr8:64502092-64502111 MsG0880045790.01.T01:CDS 35.0%
! TAGGTACAAGCATGTGTTTT+GGG + Chr8:64502899-64502918 MsG0880045790.01.T01:CDS 35.0%
! TCAATTTTCTCCATCACTGT+TGG + Chr8:64502091-64502110 MsG0880045790.01.T01:CDS 35.0%
! TGTTACTTGAGTGCTTCATT+AGG + Chr8:64501012-64501031 MsG0880045790.01.T01:five_prime_UTR 35.0%
!! TCTAACTCTAGTTCGAGTTT+TGG + Chr8:64502262-64502281 MsG0880045790.01.T01:intron 35.0%
!! TTGCATTTGGTGCTAGAAAT+GGG - Chr8:64501784-64501803 None:intergenic 35.0%
!!! ATTGATTTTAAAGCCTCTGG+TGG + Chr8:64501249-64501268 MsG0880045790.01.T01:CDS 35.0%
!!! CATTTTCAGGTGAATAGGAT+AGG + Chr8:64501974-64501993 MsG0880045790.01.T01:intron 35.0%
!!! CTTTTTTTCCCGACAAAAGA+AGG + Chr8:64501660-64501679 MsG0880045790.01.T01:intron 35.0%
!!! GGAATTGATTTTAAAGCCTC+TGG + Chr8:64501246-64501265 MsG0880045790.01.T01:CDS 35.0%
AGGAGCTTCTTTCATCTTTG+GGG + Chr8:64501155-64501174 MsG0880045790.01.T01:CDS 40.0%
ATAAACATAGCTCAGTTGGC+AGG + Chr8:64501428-64501447 MsG0880045790.01.T01:intron 40.0%
ATCACCAATGGTTCTTCCAT+TGG - Chr8:64501295-64501314 None:intergenic 40.0%
ATTATGTTGGCAGCTTCACT+TGG - Chr8:64502936-64502955 None:intergenic 40.0%
CCAACTGAGCTATGTTTATG+GGG - Chr8:64501427-64501446 None:intergenic 40.0%
CTGTCAATCTTAGGCAACTT+CGG + Chr8:64503000-64503019 MsG0880045790.01.T01:CDS 40.0%
CTTCTTCCAGTTCTTTCTGT+CGG + Chr8:64502139-64502158 MsG0880045790.01.T01:CDS 40.0%
GCCAACTGAGCTATGTTTAT+GGG - Chr8:64501428-64501447 None:intergenic 40.0%
GTTAGATGTGTACCGTTAGT+TGG - Chr8:64502225-64502244 None:intergenic 40.0%
TAAACATAGCTCAGTTGGCA+GGG + Chr8:64501429-64501448 MsG0880045790.01.T01:intron 40.0%
TACACCAATGGAAGAACCAT+TGG + Chr8:64501288-64501307 MsG0880045790.01.T01:CDS 40.0%
TCAGGTGAATAGGATAGGAA+TGG + Chr8:64501979-64501998 MsG0880045790.01.T01:intron 40.0%
TGCCAACTGAGCTATGTTTA+TGG - Chr8:64501429-64501448 None:intergenic 40.0%
TGGTTCTTCCATTGGTGTAA+CGG - Chr8:64501287-64501306 None:intergenic 40.0%
TGTCAATCTTAGGCAACTTC+GGG + Chr8:64503001-64503020 MsG0880045790.01.T01:CDS 40.0%
TTCTAGCACCAAATGCAACT+GGG + Chr8:64501786-64501805 MsG0880045790.01.T01:CDS 40.0%
TTTGCAGGGATAATTCCATG+TGG + Chr8:64502852-64502871 MsG0880045790.01.T01:CDS 40.0%
! ATACTTGAAGTTGGTCCACA+TGG - Chr8:64502870-64502889 None:intergenic 40.0%
! TTTCATCTTTGGGGACTCTT+TGG + Chr8:64501164-64501183 MsG0880045790.01.T01:CDS 40.0%
! TTTCTAGCACCAAATGCAAC+TGG + Chr8:64501785-64501804 MsG0880045790.01.T01:CDS 40.0%
!! AACTCTAGTTCGAGTTTTGG+TGG + Chr8:64502265-64502284 MsG0880045790.01.T01:intron 40.0%
!! ACTCTAGTTCGAGTTTTGGT+GGG + Chr8:64502266-64502285 MsG0880045790.01.T01:intron 40.0%
!! ATATCGTCTACGAAAGCATC+TGG - Chr8:64502184-64502203 None:intergenic 40.0%
!! ATCTGGGCTTTGAGAAATTC+TGG - Chr8:64502167-64502186 None:intergenic 40.0%
!! GTTGCATTTGGTGCTAGAAA+TGG - Chr8:64501785-64501804 None:intergenic 40.0%
!! TATCGTCTACGAAAGCATCT+GGG - Chr8:64502183-64502202 None:intergenic 40.0%
AAGGCAAACATTCCTCCCAA+TGG + Chr8:64501225-64501244 MsG0880045790.01.T01:CDS 45.0%
AATTGTTATATGCAGGGGCC+GGG + Chr8:64501458-64501477 MsG0880045790.01.T01:intron 45.0%
ACATCAAGTAGAGCATGCTG+TGG + Chr8:64502816-64502835 MsG0880045790.01.T01:CDS 45.0%
AGTAGAGCATGCTGTGGAAA+TGG + Chr8:64502822-64502841 MsG0880045790.01.T01:CDS 45.0%
ATAGGTAACGTTGGGCCAAT+AGG + Chr8:64502383-64502402 MsG0880045790.01.T01:CDS 45.0%
CAATTGTTATATGCAGGGGC+CGG + Chr8:64501457-64501476 MsG0880045790.01.T01:intron 45.0%
CCCCATAAACATAGCTCAGT+TGG + Chr8:64501424-64501443 MsG0880045790.01.T01:intron 45.0%
CGAAGTTGCCTAAGATTGAC+AGG - Chr8:64503002-64503021 None:intergenic 45.0%
CTGCTTGGCGATGATTATGT+TGG - Chr8:64502949-64502968 None:intergenic 45.0%
GAGCTAAATGACAATCTCCC+TGG + Chr8:64502515-64502534 MsG0880045790.01.T01:CDS 45.0%
GGAGGAATTCTGAATGCAAC+TGG + Chr8:64501848-64501867 MsG0880045790.01.T01:CDS 45.0%
GGAGTTAATTATGCCTCAGG+AGG + Chr8:64501824-64501843 MsG0880045790.01.T01:CDS 45.0%
GTAGAGCATGCTGTGGAAAT+GGG + Chr8:64502823-64502842 MsG0880045790.01.T01:CDS 45.0%
GTTAATTATGCCTCAGGAGG+AGG + Chr8:64501827-64501846 MsG0880045790.01.T01:CDS 45.0%
TAGAGCATGCTGTGGAAATG+GGG + Chr8:64502824-64502843 MsG0880045790.01.T01:CDS 45.0%
TCATTTCAGGGGCCAACTAA+CGG + Chr8:64502210-64502229 MsG0880045790.01.T01:CDS 45.0%
! AAGTGAATAAGTGGGGTGTC+CGG - Chr8:64501493-64501512 None:intergenic 45.0%
!! ATTAAAAATTATGATAAATA+TGG + Chr8:64502584-64502603 MsG0880045790.01.T01:CDS 5.0%
AATTATGCCTCAGGAGGAGG+AGG + Chr8:64501830-64501849 MsG0880045790.01.T01:CDS 50.0%
AGAGCATGCTGTGGAAATGG+GGG + Chr8:64502825-64502844 MsG0880045790.01.T01:CDS 50.0%
ATCATTGGCCCCAACAGTGA+TGG - Chr8:64502104-64502123 None:intergenic 50.0%
ATTGTTATATGCAGGGGCCG+GGG + Chr8:64501459-64501478 MsG0880045790.01.T01:intron 50.0%
CAAGGACAAACGTTGCTCCA+GGG - Chr8:64502535-64502554 None:intergenic 50.0%
GAAATGGGGGGCAATTTGCA+GGG + Chr8:64502838-64502857 MsG0880045790.01.T01:CDS 50.0%
GCAGCTTCACTTGGATGGTA+TGG - Chr8:64502927-64502946 None:intergenic 50.0%
TGTTGGCAGCTTCACTTGGA+TGG - Chr8:64502932-64502951 None:intergenic 50.0%
! AGTGAATAAGTGGGGTGTCC+GGG - Chr8:64501492-64501511 None:intergenic 50.0%
! CATCTTTGGGGACTCTTTGG+TGG + Chr8:64501167-64501186 MsG0880045790.01.T01:CDS 50.0%
ATCGCCAAGCAGCTACTCGA+TGG + Chr8:64502957-64502976 MsG0880045790.01.T01:CDS 55.0%
CAGAATTCCTCCTCCTCCTG+AGG - Chr8:64501840-64501859 None:intergenic 55.0%
CCATTGGTGTAACGGCCAGT+AGG - Chr8:64501279-64501298 None:intergenic 55.0%
CCTACTGGCCGTTACACCAA+TGG + Chr8:64501276-64501295 MsG0880045790.01.T01:CDS 55.0%
CTGGCTCCGACAGAAAGAAC+TGG - Chr8:64502148-64502167 None:intergenic 55.0%
GAGCATGCTGTGGAAATGGG+GGG + Chr8:64502826-64502845 MsG0880045790.01.T01:CDS 55.0%
GCAAGGACAAACGTTGCTCC+AGG - Chr8:64502536-64502555 None:intergenic 55.0%
GCCAGTAGGATTTCCACCAG+AGG - Chr8:64501265-64501284 None:intergenic 55.0%
GCCTCTGGTGGAAATCCTAC+TGG + Chr8:64501261-64501280 MsG0880045790.01.T01:CDS 55.0%
GGAAATGGGGGGCAATTTGC+AGG + Chr8:64502837-64502856 MsG0880045790.01.T01:CDS 55.0%
GTCTCCATCGAGTAGCTGCT+TGG - Chr8:64502964-64502983 None:intergenic 55.0%
! GTGAATAAGTGGGGTGTCCG+GGG - Chr8:64501491-64501510 None:intergenic 55.0%
! GGGGACTCTTTGGTGGATGC+AGG + Chr8:64501174-64501193 MsG0880045790.01.T01:CDS 60.0%
GGTGTCCGGGGTTCGAACCC+CGG - Chr8:64501479-64501498 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG + Chr8:64501471-64501490 MsG0880045790.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 64500998 64503254 64500998 ID=MsG0880045790.01;Name=MsG0880045790.01
Chr8 mRNA 64500998 64503254 64500998 ID=MsG0880045790.01.T01;Parent=MsG0880045790.01;Name=MsG0880045790.01.T01;_AED=0.20;_eAED=0.20;_QI=53|1|1|1|1|1|5|223|376
Chr8 exon 64500998 64501321 64500998 ID=MsG0880045790.01.T01:exon:24449;Parent=MsG0880045790.01.T01
Chr8 exon 64501750 64501880 64501750 ID=MsG0880045790.01.T01:exon:24450;Parent=MsG0880045790.01.T01
Chr8 exon 64501983 64502231 64501983 ID=MsG0880045790.01.T01:exon:24451;Parent=MsG0880045790.01.T01
Chr8 exon 64502350 64502605 64502350 ID=MsG0880045790.01.T01:exon:24452;Parent=MsG0880045790.01.T01
Chr8 exon 64502808 64503254 64502808 ID=MsG0880045790.01.T01:exon:24453;Parent=MsG0880045790.01.T01
Chr8 five_prime_UTR 64500998 64501050 64500998 ID=MsG0880045790.01.T01:five_prime_utr;Parent=MsG0880045790.01.T01
Chr8 CDS 64501051 64501321 64501051 ID=MsG0880045790.01.T01:cds;Parent=MsG0880045790.01.T01
Chr8 CDS 64501750 64501880 64501750 ID=MsG0880045790.01.T01:cds;Parent=MsG0880045790.01.T01
Chr8 CDS 64501983 64502231 64501983 ID=MsG0880045790.01.T01:cds;Parent=MsG0880045790.01.T01
Chr8 CDS 64502350 64502605 64502350 ID=MsG0880045790.01.T01:cds;Parent=MsG0880045790.01.T01
Chr8 CDS 64502808 64503031 64502808 ID=MsG0880045790.01.T01:cds;Parent=MsG0880045790.01.T01
Chr8 three_prime_UTR 64503032 64503254 64503032 ID=MsG0880045790.01.T01:three_prime_utr;Parent=MsG0880045790.01.T01
Gene Sequence

>MsG0880045790.01.T01

ATGAAAGCTATGGCATTGAAGTGTTATAACATTTTGGTCCTTATATTTTTGGTTTTGAATGTGAGCTTTTATGGAAATGTTGTACTAGCTCAAAAAAATGGCTTAGGAGCTTCTTTCATCTTTGGGGACTCTTTGGTGGATGCAGGAAACAATAACTATCTTTCAACTCTTTCTAAGGCAAACATTCCTCCCAATGGAATTGATTTTAAAGCCTCTGGTGGAAATCCTACTGGCCGTTACACCAATGGAAGAACCATTGGTGATTTAGTAGGAGAGGAATTGGGACAACCAAATTATGCTGTCCCATTTCTAGCACCAAATGCAACTGGGAAATCAATACTTTATGGAGTTAATTATGCCTCAGGAGGAGGAGGAATTCTGAATGCAACTGGAAGAATATTTGTGAATAGGATAGGAATGGATATTCAAATAGATTACTTCACCATAACAAGAAAACAAATTGACAAACTTCTAGGTCAATCAAAAGCAAGAGATTTCATAATGAAGAAATCAATTTTCTCCATCACTGTTGGGGCCAATGATTTTCTCAACAATTATCTTCTTCCAGTTCTTTCTGTCGGAGCCAGAATTTCTCAAAGCCCAGATGCTTTCGTAGACGATATGATTAATCATTTCAGGGGCCAACTAACGAGACTTTACAAAATGGATGCTAGAAAATTTGTTATAGGTAACGTTGGGCCAATAGGATGTATACCTTACCAAAAGACTATCAATCAATTGAATGAAGATGAATGTGTGGATTTAGCTAACAAACTTGCAATTCAATACAATGGTCGATTGAAGGATATGCTTGCTGAGCTAAATGACAATCTCCCTGGAGCAACGTTTGTCCTTGCAAATGTCTATGATTTAGTGATGGAACTCATTAAAAATTATGATAAATATGGATTTACAACATCAAGTAGAGCATGCTGTGGAAATGGGGGGCAATTTGCAGGGATAATTCCATGTGGACCAACTTCAAGTATATGCAATGATAGGTACAAGCATGTGTTTTGGGATCCATACCATCCAAGTGAAGCTGCCAACATAATCATCGCCAAGCAGCTACTCGATGGAGACAAGAGATACATATCTCCTGTCAATCTTAGGCAACTTCGGGATCTTTAA

Protein sequence

>MsG0880045790.01.T01

MKAMALKCYNILVLIFLVLNVSFYGNVVLAQKNGLGASFIFGDSLVDAGNNNYLSTLSKANIPPNGIDFKASGGNPTGRYTNGRTIGDLVGEELGQPNYAVPFLAPNATGKSILYGVNYASGGGGILNATGRIFVNRIGMDIQIDYFTITRKQIDKLLGQSKARDFIMKKSIFSITVGANDFLNNYLLPVLSVGARISQSPDAFVDDMINHFRGQLTRLYKMDARKFVIGNVGPIGCIPYQKTINQLNEDECVDLANKLAIQYNGRLKDMLAELNDNLPGATFVLANVYDLVMELIKNYDKYGFTTSSRACCGNGGQFAGIIPCGPTSSICNDRYKHVFWDPYHPSEAANIIIAKQLLDGDKRYISPVNLRQLRDL*