AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006572.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006572.01.T02 MTR_3g078850 81.928 83 15 0 38 120 51 133 1.74e-40 140
MsG0280006572.01.T02 MTR_8g099575 63.415 82 4 1 131 186 112 193 2.67e-26 100
MsG0280006572.01.T02 MTR_3g096570 60.000 70 26 1 5 74 77 144 1.80e-20 86.3
MsG0280006572.01.T02 MTR_3g096562 94.872 39 2 0 5 43 241 279 2.44e-19 84.7
MsG0280006572.01.T02 MTR_8g027620 46.914 81 17 1 131 185 135 215 8.37e-15 71.2
MsG0280006572.01.T02 MTR_3g091440 36.111 108 37 3 105 186 94 195 5.32e-13 65.5
MsG0280006572.01.T02 MTR_4g099210 37.273 110 37 4 103 186 90 193 5.57e-13 65.1
MsG0280006572.01.T02 MTR_3g091440 36.111 108 37 3 105 186 93 194 5.70e-13 65.1
MsG0280006572.01.T02 MTR_1g016430 42.683 82 21 1 131 186 85 166 2.91e-12 62.4
MsG0280006572.01.T02 MTR_1g016430 42.683 82 21 1 131 186 151 232 5.60e-12 62.8
MsG0280006572.01.T02 MTR_1g016430 42.683 82 21 1 131 186 183 264 7.30e-12 62.8
MsG0280006572.01.T01 MTR_3g078850 81.928 83 15 0 38 120 51 133 1.74e-40 140
MsG0280006572.01.T01 MTR_8g099575 63.415 82 4 1 131 186 112 193 2.67e-26 100
MsG0280006572.01.T01 MTR_3g096570 60.000 70 26 1 5 74 77 144 1.80e-20 86.3
MsG0280006572.01.T01 MTR_3g096562 94.872 39 2 0 5 43 241 279 2.44e-19 84.7
MsG0280006572.01.T01 MTR_8g027620 46.914 81 17 1 131 185 135 215 8.37e-15 71.2
MsG0280006572.01.T01 MTR_3g091440 36.111 108 37 3 105 186 94 195 5.32e-13 65.5
MsG0280006572.01.T01 MTR_4g099210 37.273 110 37 4 103 186 90 193 5.57e-13 65.1
MsG0280006572.01.T01 MTR_3g091440 36.111 108 37 3 105 186 93 194 5.70e-13 65.1
MsG0280006572.01.T01 MTR_1g016430 42.683 82 21 1 131 186 85 166 2.91e-12 62.4
MsG0280006572.01.T01 MTR_1g016430 42.683 82 21 1 131 186 151 232 5.60e-12 62.8
MsG0280006572.01.T01 MTR_1g016430 42.683 82 21 1 131 186 183 264 7.30e-12 62.8
MsG0280006572.01.T03 MTR_3g078850 81.928 83 15 0 38 120 51 133 1.74e-40 140
MsG0280006572.01.T03 MTR_8g099575 63.415 82 4 1 131 186 112 193 2.67e-26 100
MsG0280006572.01.T03 MTR_3g096570 60.000 70 26 1 5 74 77 144 1.80e-20 86.3
MsG0280006572.01.T03 MTR_3g096562 94.872 39 2 0 5 43 241 279 2.44e-19 84.7
MsG0280006572.01.T03 MTR_8g027620 46.914 81 17 1 131 185 135 215 8.37e-15 71.2
MsG0280006572.01.T03 MTR_3g091440 36.111 108 37 3 105 186 94 195 5.32e-13 65.5
MsG0280006572.01.T03 MTR_4g099210 37.273 110 37 4 103 186 90 193 5.57e-13 65.1
MsG0280006572.01.T03 MTR_3g091440 36.111 108 37 3 105 186 93 194 5.70e-13 65.1
MsG0280006572.01.T03 MTR_1g016430 42.683 82 21 1 131 186 85 166 2.91e-12 62.4
MsG0280006572.01.T03 MTR_1g016430 42.683 82 21 1 131 186 151 232 5.60e-12 62.8
MsG0280006572.01.T03 MTR_1g016430 42.683 82 21 1 131 186 183 264 7.30e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006572.01.T02 AT5G21140 58.824 85 35 0 34 118 46 130 6.06e-27 104
MsG0280006572.01.T02 AT5G24270 45.122 82 19 2 131 186 69 150 9.99e-14 66.2
MsG0280006572.01.T02 AT1G64480 46.914 81 17 1 132 186 117 197 2.12e-13 65.9
MsG0280006572.01.T02 AT5G24270 45.122 82 19 2 131 186 91 172 2.17e-13 65.9
MsG0280006572.01.T02 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T02 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T02 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T02 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T02 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T02 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T02 AT4G17615 34.545 110 36 3 105 186 50 151 3.79e-12 62.0
MsG0280006572.01.T02 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T02 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T02 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T02 AT4G17615 34.545 110 36 3 105 186 92 193 1.51e-11 61.6
MsG0280006572.01.T01 AT5G21140 58.824 85 35 0 34 118 46 130 6.06e-27 104
MsG0280006572.01.T01 AT5G24270 45.122 82 19 2 131 186 69 150 9.99e-14 66.2
MsG0280006572.01.T01 AT1G64480 46.914 81 17 1 132 186 117 197 2.12e-13 65.9
MsG0280006572.01.T01 AT5G24270 45.122 82 19 2 131 186 91 172 2.17e-13 65.9
MsG0280006572.01.T01 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T01 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T01 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T01 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T01 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T01 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T01 AT4G17615 34.545 110 36 3 105 186 50 151 3.79e-12 62.0
MsG0280006572.01.T01 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T01 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T01 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T01 AT4G17615 34.545 110 36 3 105 186 92 193 1.51e-11 61.6
MsG0280006572.01.T03 AT5G21140 58.824 85 35 0 34 118 46 130 6.06e-27 104
MsG0280006572.01.T03 AT5G24270 45.122 82 19 2 131 186 69 150 9.99e-14 66.2
MsG0280006572.01.T03 AT1G64480 46.914 81 17 1 132 186 117 197 2.12e-13 65.9
MsG0280006572.01.T03 AT5G24270 45.122 82 19 2 131 186 91 172 2.17e-13 65.9
MsG0280006572.01.T03 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T03 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T03 AT1G64480 46.914 81 17 1 132 186 117 197 2.24e-13 66.2
MsG0280006572.01.T03 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T03 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T03 AT5G24270 45.122 82 19 2 131 186 116 197 4.96e-13 65.5
MsG0280006572.01.T03 AT4G17615 34.545 110 36 3 105 186 50 151 3.79e-12 62.0
MsG0280006572.01.T03 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T03 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T03 AT4G17615 34.545 110 36 3 105 186 92 193 7.89e-12 62.0
MsG0280006572.01.T03 AT4G17615 34.545 110 36 3 105 186 92 193 1.51e-11 61.6

Find 130 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGACTCTATTTGGATTT+TGG 0.131058 2:+3597568 MsG0280006572.01.T02:intron
AGGAGCTCTTTGACTCTATT+TGG 0.170115 2:+3597561 MsG0280006572.01.T02:intron
ATAAACTTACCCTGTCTATT+TGG 0.195504 2:+3598279 MsG0280006572.01.T02:intron
CAAATATTTGTTCTGTTATA+TGG 0.209727 2:+3597872 MsG0280006572.01.T02:intron
TTGTTAATTATTAAAATAAT+TGG 0.214099 2:-3599629 None:intergenic
TAATAAGTTATCTCAGATTT+TGG 0.215110 2:+3592327 MsG0280006572.01.T02:five_prime_UTR
AAACAATTTCTCTCTCTTCT+AGG 0.222440 2:+3598609 MsG0280006572.01.T02:intron
TAAATTCGTAGTCACTTTCT+AGG 0.225516 2:+3597217 MsG0280006572.01.T02:intron
TTCCTTACAGTTAATCTTCT+AGG 0.227277 2:+3598834 MsG0280006572.01.T02:three_prime_UTR
TTGGATTCCTTCTCTTTCTA+AGG 0.244466 2:+3598767 MsG0280006572.01.T02:three_prime_UTR
CAACCCCAGCATTGTGTTCT+AGG 0.244503 2:-3599250 None:intergenic
ATCAGCACACTTTATGATAA+AGG 0.275956 2:-3597787 None:intergenic
CTCCACACCTTCCTGGTTCT+TGG 0.283771 2:+3598081 MsG0280006572.01.T02:intron
AGTTTCTCACAGGTGAAAAT+TGG 0.290534 2:+3592442 MsG0280006572.01.T02:five_prime_UTR
ATTGCCAGGACTCAAATTAT+AGG 0.297254 2:+3592761 MsG0280006572.01.T02:five_prime_UTR
TATTATGTTGTTTGTTGTCT+TGG 0.306502 2:+3598957 MsG0280006572.01.T02:three_prime_UTR
GGCATAACAGAATCTGTAAA+AGG 0.317823 2:-3598493 None:intergenic
AATTGAGAGAGAGGAAATAT+TGG 0.318877 2:+3592485 MsG0280006572.01.T02:five_prime_UTR
TACTATAGTGTAGCAGAGTT+TGG 0.325641 2:+3596799 MsG0280006572.01.T02:intron
CATTGAGTTCGCGCATCATT+TGG 0.336290 2:+3599203 MsG0280006572.01.T02:three_prime_UTR
AATGTCTTATAGGACTTGAT+TGG 0.338333 2:+3596630 MsG0280006572.01.T02:three_prime_UTR
CGGTAGGATAAATGTCTTAT+AGG 0.348292 2:+3596620 MsG0280006572.01.T02:three_prime_UTR
ACAGTAGTGTATTCCTCTTT+TGG 0.349058 2:-3598011 None:intergenic
CTGACGGTTATTCTTCCTTC+AGG 0.349765 2:-3599031 None:intergenic
TTACACTAGCATCATGCTAT+TGG 0.354514 2:+3597021 MsG0280006572.01.T02:intron
GGTAAATCATTTCTGTTTGA+TGG 0.356491 2:+3592066 MsG0280006572.01.T02:five_prime_UTR
ATCCTAGAAGATTAACTGTA+AGG 0.358201 2:-3598836 None:intergenic
GAAAGCTTATTGAAAGTATG+AGG 0.360461 2:+3591982 MsG0280006572.01.T02:five_prime_UTR
ATGAGGGTTGGGTTTGCAAT+TGG 0.366955 2:+3591999 MsG0280006572.01.T02:five_prime_UTR
AATTGTTTACCGAGAATCAT+TGG 0.367669 2:-3598655 None:intergenic
AAACAACATAATAGAAATAA+AGG 0.370209 2:-3598947 None:intergenic
AGAAAATATCAAATGATATT+CGG 0.371826 2:-3598545 None:intergenic
ATTGAGAGAGAGGAAATATT+GGG 0.374357 2:+3592486 MsG0280006572.01.T02:five_prime_UTR
TTTGCCCATTGCAAATGTTT+CGG 0.377108 2:+3598468 MsG0280006572.01.T02:intron
TGAAAGTTAATGTTTGATCT+TGG 0.381416 2:+3597369 MsG0280006572.01.T02:intron
TTCCTTCTTGCCAAATAGAC+AGG 0.395654 2:-3598289 None:intergenic
TAGAGACCTAAGCCATGCTT+TGG 0.397963 2:+3597917 MsG0280006572.01.T02:intron
AACTCTGCTACACTATAGTA+TGG 0.399038 2:-3596796 None:intergenic
ACCTTGAAGCGGATGACTCC+TGG 0.399741 2:-3596683 None:intergenic
GTCAGAAATTTACATGGTAA+TGG 0.404378 2:+3599049 MsG0280006572.01.T02:three_prime_UTR
TTGTAATTGTATTTAAAAGA+TGG 0.407426 2:+3598342 MsG0280006572.01.T02:intron
GAGAATCATTGGAATTACTA+TGG 0.412485 2:-3598644 None:intergenic
TTGTGAAAAGGGAAGAGAAA+AGG 0.420966 2:-3597256 None:intergenic
ACCTCATAGGTCATGTTGTC+GGG 0.426854 2:-3598731 None:intergenic
GAAGCAACACAAATTACAAT+TGG 0.426892 2:+3592720 MsG0280006572.01.T02:five_prime_UTR
TAAGAAAGAGTGCATGCATT+AGG 0.429111 2:+3597514 MsG0280006572.01.T02:intron
TTATTGAAAGTATGAGGGTT+GGG 0.431143 2:+3591988 MsG0280006572.01.T02:five_prime_UTR
TGTGAAAAGGGAAGAGAAAA+GGG 0.437580 2:-3597255 None:intergenic
ATGTCTTATAGGACTTGATT+GGG 0.449988 2:+3596631 MsG0280006572.01.T02:three_prime_UTR
GAGAGAAATTGTTTAAATTG+TGG 0.452821 2:-3598600 None:intergenic
AAAACAGAATATGAAATTGA+AGG 0.453235 2:-3592606 None:intergenic
GCCAGGAGTCATCCGCTTCA+AGG 0.456651 2:+3596682 MsG0280006572.01.T02:three_prime_UTR
AGGGTTGGGTTTGCAATTGG+AGG 0.457684 2:+3592002 MsG0280006572.01.T02:five_prime_UTR
TCAGCACACTTTATGATAAA+GGG 0.460590 2:-3597786 None:intergenic
TATAAAGTAGATGTACTTTG+AGG 0.461536 2:-3598804 None:intergenic
CACCCTCCAAAGCATGGCTT+AGG 0.462223 2:-3597923 None:intergenic
TAGTACGCTAGCTCAGTGTT+GGG 0.462812 2:+3599374 MsG0280006572.01.T02:three_prime_UTR
ACTACTGTTGATGTAGAGTT+AGG 0.466101 2:+3598026 MsG0280006572.01.T02:intron
AATTTAGTGCAAAGTAGCAC+TGG 0.470996 2:+3599574 MsG0280006572.01.T02:three_prime_UTR
AAAAGAATTATTACCAAAAG+AGG 0.473187 2:+3597998 MsG0280006572.01.T02:intron
TTAGTACGCTAGCTCAGTGT+TGG 0.477661 2:+3599373 MsG0280006572.01.T02:three_prime_UTR
GTTTGATGAATCTTATTGCC+AGG 0.478027 2:+3592747 MsG0280006572.01.T02:five_prime_UTR
AGACCTAAGCCATGCTTTGG+AGG 0.482008 2:+3597920 MsG0280006572.01.T02:intron
TATACCTATAATTTGAGTCC+TGG 0.482826 2:-3592765 None:intergenic
ATAGTAATTCCAATGATTCT+CGG 0.483137 2:+3598646 MsG0280006572.01.T02:three_prime_UTR
AAAGTGACTACGAATTTACT+TGG 0.483696 2:-3597212 None:intergenic
GGTTCTCAATCTAACCTCAT+AGG 0.487134 2:-3598744 None:intergenic
AATCTTGTGGTGCATTTGAA+AGG 0.487390 2:+3597661 MsG0280006572.01.T02:intron
CTTATTGAAAGTATGAGGGT+TGG 0.487571 2:+3591987 MsG0280006572.01.T02:five_prime_UTR
CTTGATGTATTCATAAATCA+AGG 0.487793 2:-3597289 None:intergenic
TTTGCTGATACTTTGTTCAC+TGG 0.500918 2:+3598375 MsG0280006572.01.T02:intron
GGGAGCCTAGAACACAATGC+TGG 0.501767 2:+3599245 MsG0280006572.01.T02:three_prime_UTR
TTGTATTTAAAAGATGGTCT+CGG 0.511672 2:+3598348 MsG0280006572.01.T02:intron
TTCTCTGATCCTCGTGTGCA+AGG 0.511875 2:-3599275 None:intergenic
GAATTACTATGGCGTCTTCG+TGG 0.514202 2:-3598633 None:intergenic
ATTTAAGAATGTTGATTGAC+TGG 0.515848 2:+3592295 MsG0280006572.01.T02:five_prime_UTR
AACCTCATAGGTCATGTTGT+CGG 0.516139 2:-3598732 None:intergenic
AAAGCTTATTGAAAGTATGA+GGG 0.516800 2:+3591983 MsG0280006572.01.T02:five_prime_UTR
ACCCTGTCTATTTGGCAAGA+AGG 0.521867 2:+3598287 MsG0280006572.01.T02:intron
ACAGGGTAAGTTTATTGAAG+AGG 0.524833 2:-3598271 None:intergenic
TGAGTATACCTAGACTTGGT+TGG 0.534127 2:+3597314 MsG0280006572.01.T02:intron
GGAACCGAAACATTTGCAAT+GGG 0.534611 2:-3598472 None:intergenic
CATTGTCAGTATGCCATCCA+TGG 0.535721 2:-3599441 None:intergenic
TATATAATCAAGTCTTGTGC+AGG 0.536411 2:+3596988 MsG0280006572.01.T02:intron
GGAGCCTAGAACACAATGCT+GGG 0.537000 2:+3599246 MsG0280006572.01.T02:three_prime_UTR
TGAGGTTAGATTGAGAACCT+TGG 0.541598 2:+3598748 MsG0280006572.01.T02:three_prime_UTR
GGGGTTGAGCCTTGCACACG+AGG 0.542890 2:+3599266 MsG0280006572.01.T02:three_prime_UTR
GCAACACAAATTACAATTGG+AGG 0.542993 2:+3592723 MsG0280006572.01.T02:five_prime_UTR
TTGATCATGTAGTTTCTCAC+AGG 0.544566 2:+3592432 MsG0280006572.01.T02:five_prime_UTR
CATGTGACGTGGTTGGTCCA+TGG 0.545320 2:+3599424 MsG0280006572.01.T02:three_prime_UTR
AAACTTATTCGCCAAGAACC+AGG 0.546091 2:-3598092 None:intergenic
ATCAAAAGACATAGTATGCA+AGG 0.553748 2:-3597189 None:intergenic
CAATCTAATCACTTCCAGCC+AGG 0.557910 2:+3596665 MsG0280006572.01.T02:three_prime_UTR
AGGAACCGAAACATTTGCAA+TGG 0.560979 2:-3598473 None:intergenic
GCATGTTGATGTAATATGTA+TGG 0.561560 2:+3599396 MsG0280006572.01.T02:three_prime_UTR
GAAATAACTAAGAATAGCAT+AGG 0.562256 2:+3597541 MsG0280006572.01.T02:intron
TGAAGCGGATGACTCCTGGC+TGG 0.564886 2:-3596679 None:intergenic
GACCTAAGCCATGCTTTGGA+GGG 0.565399 2:+3597921 MsG0280006572.01.T02:intron
GCTAACAACCAACCAAGTCT+AGG 0.566111 2:-3597322 None:intergenic
ATTACCATGTAAATTTCTGA+CGG 0.569422 2:-3599047 None:intergenic
CGCCAAGAACCAGGAAGGTG+TGG 0.571428 2:-3598083 None:intergenic
TCCCGACAACATGACCTATG+AGG 0.573960 2:+3598730 MsG0280006572.01.T02:three_prime_UTR
TCTGACACATTTGTCCATGC+TGG 0.574267 2:-3599155 None:intergenic
AGTTTATTGAAGAGGTGTAG+AGG 0.579323 2:-3598263 None:intergenic
ATTCTTCCTTCAGGATCATG+AGG 0.582060 2:-3599022 None:intergenic
ATTTAGTGCAAAGTAGCACT+GGG 0.582868 2:+3599575 MsG0280006572.01.T02:three_prime_UTR
TCCTTCTTGCCAAATAGACA+GGG 0.583862 2:-3598288 None:intergenic
TTTGTACTATAGCATATCGC+GGG 0.583983 2:-3596827 None:intergenic
GTCTCTATAAACTTGAACAC+AGG 0.584272 2:-3597901 None:intergenic
AATCTGCAAATATCAAGAAG+AGG 0.589606 2:-3598514 None:intergenic
AGATTGAGTATACCTAGACT+TGG 0.591766 2:+3597310 MsG0280006572.01.T02:intron
TGACGTGGTTGGTCCATGGA+TGG 0.594213 2:+3599428 MsG0280006572.01.T02:three_prime_UTR
TTTAAAAGGATACAATCTTG+TGG 0.595749 2:+3597648 MsG0280006572.01.T02:intron
ATGTGTCCTCATGATCCTGA+AGG 0.596784 2:+3599016 MsG0280006572.01.T02:three_prime_UTR
AAGTAAGTCTAACCTTGAAG+CGG 0.599854 2:-3596694 None:intergenic
TTAGAAAGAGAAGGAATCCA+AGG 0.602333 2:-3598765 None:intergenic
ACATGGTCCTTAGAAAGAGA+AGG 0.603950 2:-3598774 None:intergenic
TACTTTGAGGAAGTACTACA+TGG 0.635622 2:-3598791 None:intergenic
GGTATTTCATGTGACGTGGT+TGG 0.646417 2:+3599417 MsG0280006572.01.T02:three_prime_UTR
AGTTCAATATCTCACCAGCA+TGG 0.657608 2:+3599141 MsG0280006572.01.T02:three_prime_UTR
ATAACCGTCAGAAATTTACA+TGG 0.676031 2:+3599043 MsG0280006572.01.T02:three_prime_UTR
ATTTGAAGATGAGCACACAA+AGG 0.676244 2:-3597854 None:intergenic
GACATGAATCAGTCACACAA+AGG 0.684240 2:-3599083 None:intergenic
ACTAAATTATAGTTCGCACA+TGG 0.688637 2:-3599559 None:intergenic
GAGCCTAGAACACAATGCTG+GGG 0.696210 2:+3599247 MsG0280006572.01.T02:three_prime_UTR
TTATTCGCCAAGAACCAGGA+AGG 0.700712 2:-3598088 None:intergenic
GTATGGTATTTCATGTGACG+TGG 0.700786 2:+3599413 MsG0280006572.01.T02:three_prime_UTR
AGGTGAAAATTGGAACCACA+AGG 0.706245 2:+3592452 MsG0280006572.01.T02:five_prime_UTR
TTTAGTGCAAAGTAGCACTG+GGG 0.792485 2:+3599576 MsG0280006572.01.T02:three_prime_UTR
GCTGGTGAGATATTGAACTG+AGG 0.799022 2:-3599137 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTGTTATTTTTTATTAA+AGG - Chr2:3594006-3594025 None:intergenic 10.0%
!! AAACAACATAATAGAAATAA+AGG - Chr2:3598950-3598969 None:intergenic 15.0%
!! AATTTCAATTTCTTAATGAA+GGG + Chr2:3591921-3591940 MsG0280006572.01.T02:intron 15.0%
!! AGAAAATATCAAATGATATT+CGG - Chr2:3598548-3598567 None:intergenic 15.0%
!! AGGTTTCAATAATTATTAAT+TGG + Chr2:3593824-3593843 MsG0280006572.01.T02:intron 15.0%
!! CAATAATTATTAATTGGATT+AGG + Chr2:3593830-3593849 MsG0280006572.01.T02:intron 15.0%
!! TATGTTAGTAAAGAAATAAA+TGG + Chr2:3595203-3595222 MsG0280006572.01.T02:intron 15.0%
!! TTCATTAAGAAATTGAAATT+GGG - Chr2:3591921-3591940 None:intergenic 15.0%
!! TTGTAATTGTATTTAAAAGA+TGG + Chr2:3598342-3598361 MsG0280006572.01.T02:intron 15.0%
!!! ACTCCTTTTTTTTATTTTTT+TGG + Chr2:3598912-3598931 MsG0280006572.01.T02:three_prime_UTR 15.0%
!!! ATATAATCTTTTATTTGAAC+TGG + Chr2:3597973-3597992 MsG0280006572.01.T02:intron 15.0%
!!! ATTTGTACACATATTTTAAA+AGG + Chr2:3597634-3597653 MsG0280006572.01.T02:intron 15.0%
!!! CAACAATATATGATTTTTAA+TGG + Chr2:3596762-3596781 MsG0280006572.01.T02:intron 15.0%
!!! GAATTTTAAATTTGTGAAAA+GGG - Chr2:3597270-3597289 None:intergenic 15.0%
!!! GTTAAAAGAAAGATTTATTT+TGG + Chr2:3596388-3596407 MsG0280006572.01.T02:intron 15.0%
!!! TGTGTATTATTTTTTTTGAA+AGG - Chr2:3599539-3599558 None:intergenic 15.0%
!!! TTTTTGTTCTTAGAATAAAA+AGG + Chr2:3592177-3592196 MsG0280006572.01.T02:five_prime_UTR 15.0%
!! AAAAATCATATATTGTTGTC+TGG - Chr2:3596760-3596779 None:intergenic 20.0%
!! AAAACAGAATATGAAATTGA+AGG - Chr2:3592609-3592628 None:intergenic 20.0%
!! AAAAGAATTATTACCAAAAG+AGG + Chr2:3597998-3598017 MsG0280006572.01.T02:intron 20.0%
!! AAAGTTAAAATGATGAACAA+TGG - Chr2:3594903-3594922 None:intergenic 20.0%
!! CAAAAAGATCAACTAAATTA+TGG - Chr2:3598186-3598205 None:intergenic 20.0%
!! CAAATATTTGTTCTGTTATA+TGG + Chr2:3597872-3597891 MsG0280006572.01.T02:intron 20.0%
!! CAATTTCAATTTCTTAATGA+AGG + Chr2:3591920-3591939 MsG0280006572.01.T02:intron 20.0%
!! CTCATTTATTCTTACTAATA+GGG + Chr2:3593775-3593794 MsG0280006572.01.T02:intron 20.0%
!! CTTCATTAAGAAATTGAAAT+TGG - Chr2:3591922-3591941 None:intergenic 20.0%
!! CTTTATTACATATTTGAGAA+GGG + Chr2:3594591-3594610 MsG0280006572.01.T02:intron 20.0%
!! GAAAGATTAAAATTTGACAA+TGG + Chr2:3593536-3593555 MsG0280006572.01.T02:intron 20.0%
!! GAACATATTATTATGACAAA+AGG - Chr2:3595782-3595801 None:intergenic 20.0%
!! GATAAAGATTGACATAATTA+TGG + Chr2:3595179-3595198 MsG0280006572.01.T02:intron 20.0%
!! GGTATATTGTAAAAAATAAC+AGG - Chr2:3597171-3597190 None:intergenic 20.0%
!! GTGCCAAAAAAATAAAAAAA+AGG - Chr2:3598918-3598937 None:intergenic 20.0%
!! TAACAATAAAATACTCCAAT+TGG - Chr2:3594209-3594228 None:intergenic 20.0%
!! TATCTGATTAAAATCTAAGA+TGG - Chr2:3593078-3593097 None:intergenic 20.0%
!! TCATAGAATTAAAAGAGATT+AGG + Chr2:3593693-3593712 MsG0280006572.01.T02:intron 20.0%
!! TCATTAAGAAATTGAAATTG+GGG - Chr2:3591920-3591939 None:intergenic 20.0%
!! TCTCATTTATTCTTACTAAT+AGG + Chr2:3593774-3593793 MsG0280006572.01.T02:intron 20.0%
!! TTTCTTTACAAATGAAATCA+TGG - Chr2:3594627-3594646 None:intergenic 20.0%
!! TTTGACAATGGAAATTTAAA+TGG + Chr2:3593548-3593567 MsG0280006572.01.T02:intron 20.0%
!!! AATGGAAATTTAAATGGTTT+TGG + Chr2:3593554-3593573 MsG0280006572.01.T02:intron 20.0%
!!! AGAATATAAGTCATTTTGTT+TGG + Chr2:3597814-3597833 MsG0280006572.01.T02:intron 20.0%
!!! ATAATTCTGGTTTTTAATCA+TGG + Chr2:3596175-3596194 MsG0280006572.01.T02:intron 20.0%
!!! ATGAAAAGTTTTATTCCATT+AGG + Chr2:3594183-3594202 MsG0280006572.01.T02:intron 20.0%
!!! ATTTTAAATATTTTGTCCAC+CGG + Chr2:3596337-3596356 MsG0280006572.01.T02:intron 20.0%
!!! CATAATTTAGTTGATCTTTT+TGG + Chr2:3598184-3598203 MsG0280006572.01.T02:intron 20.0%
!!! CATTTTGGTTTGAATTAATA+TGG + Chr2:3592832-3592851 MsG0280006572.01.T02:intron 20.0%
!!! GAGTATTTTATTGTTATGTT+TGG + Chr2:3594213-3594232 MsG0280006572.01.T02:intron 20.0%
!!! GCTGTATTTTAATTGTTTTA+GGG + Chr2:3599225-3599244 MsG0280006572.01.T02:three_prime_UTR 20.0%
!!! GGAATTTTAAATTTGTGAAA+AGG - Chr2:3597271-3597290 None:intergenic 20.0%
!!! GTATTGTGTTTTTTTATCAA+TGG + Chr2:3593170-3593189 MsG0280006572.01.T02:intron 20.0%
!!! GTTATTTGATTTTTGAAAAC+TGG + Chr2:3594493-3594512 MsG0280006572.01.T02:intron 20.0%
!!! TAATAAGTTATCTCAGATTT+TGG + Chr2:3592327-3592346 MsG0280006572.01.T02:five_prime_UTR 20.0%
!!! TAATGTATGGTTGATTTATA+AGG + Chr2:3593514-3593533 MsG0280006572.01.T02:intron 20.0%
!!! TATACCATATTTTCTGTTTT+TGG + Chr2:3596948-3596967 MsG0280006572.01.T02:intron 20.0%
!!! TCATGAATTTATCATTTTGA+AGG + Chr2:3592220-3592239 MsG0280006572.01.T02:five_prime_UTR 20.0%
!!! TTTGATGATTAAACTGATTT+GGG + Chr2:3594288-3594307 MsG0280006572.01.T02:intron 20.0%
!!! TTTTGATGATTAAACTGATT+TGG + Chr2:3594287-3594306 MsG0280006572.01.T02:intron 20.0%
! AAACTTTGATTCTACATTTG+TGG + Chr2:3595881-3595900 MsG0280006572.01.T02:three_prime_UTR 25.0%
! AACTGTAAGAGCAAAAAATA+TGG - Chr2:3594809-3594828 None:intergenic 25.0%
! AAGTTTAATTACACTCACAA+TGG - Chr2:3593341-3593360 None:intergenic 25.0%
! AGAGAAGAAAATTGAATGTA+TGG + Chr2:3594724-3594743 MsG0280006572.01.T02:intron 25.0%
! AGCATAATAAATTCAGAAGT+TGG - Chr2:3596023-3596042 None:intergenic 25.0%
! ATAGTAATTCCAATGATTCT+CGG + Chr2:3598646-3598665 MsG0280006572.01.T02:three_prime_UTR 25.0%
! ATATGCTTGACAAGTAAATT+TGG + Chr2:3595821-3595840 MsG0280006572.01.T02:three_prime_UTR 25.0%
! ATGACCAAAAACAGAAAATA+TGG - Chr2:3596955-3596974 None:intergenic 25.0%
! ATTACCATGTAAATTTCTGA+CGG - Chr2:3599050-3599069 None:intergenic 25.0%
! ATTGAAAAAAATTGAGAGAG+AGG + Chr2:3592476-3592495 MsG0280006572.01.T02:five_prime_UTR 25.0%
! ATTGAAAATTTGTAACGTGT+AGG - Chr2:3594562-3594581 None:intergenic 25.0%
! ATTGTAGTAGTTATAGACTA+CGG + Chr2:3595287-3595306 MsG0280006572.01.T02:intron 25.0%
! ATTGTGATGACATAAATTTG+GGG - Chr2:3594462-3594481 None:intergenic 25.0%
! ATTTAGACAGTTCAGTATAA+GGG - Chr2:3595759-3595778 None:intergenic 25.0%
! CAAATCTCAAAAACTCATAA+GGG - Chr2:3597598-3597617 None:intergenic 25.0%
! CAAGTTTGAAAAGAAAGTAA+TGG + Chr2:3596132-3596151 MsG0280006572.01.T02:three_prime_UTR 25.0%
! CATGTGTTTATGTAGATAAA+AGG - Chr2:3592803-3592822 None:intergenic 25.0%
! CCTTCTCAAATATGTAATAA+AGG - Chr2:3594593-3594612 None:intergenic 25.0%
! CCTTTATTACATATTTGAGA+AGG + Chr2:3594590-3594609 MsG0280006572.01.T02:intron 25.0%
! CTTGATGTATTCATAAATCA+AGG - Chr2:3597292-3597311 None:intergenic 25.0%
! GAAATAACTAAGAATAGCAT+AGG + Chr2:3597541-3597560 MsG0280006572.01.T02:intron 25.0%
! GAGAGAAATTGTTTAAATTG+TGG - Chr2:3598603-3598622 None:intergenic 25.0%
! GATAAATGTATGGTTTCATA+TGG - Chr2:3595475-3595494 None:intergenic 25.0%
! GATTGTGATGACATAAATTT+GGG - Chr2:3594463-3594482 None:intergenic 25.0%
! TAAAATGATGAACAATGGAA+AGG - Chr2:3594898-3594917 None:intergenic 25.0%
! TATAAAGTAGATGTACTTTG+AGG - Chr2:3598807-3598826 None:intergenic 25.0%
! TATGCCATTATGTACAAAAA+AGG - Chr2:3595357-3595376 None:intergenic 25.0%
! TCAAATCTCAAAAACTCATA+AGG - Chr2:3597599-3597618 None:intergenic 25.0%
! TGAAAGTTAATGTTTGATCT+TGG + Chr2:3597369-3597388 MsG0280006572.01.T02:intron 25.0%
! TGATTACTCCATAATAAACT+TGG - Chr2:3593249-3593268 None:intergenic 25.0%
! TGATTGTGATGACATAAATT+TGG - Chr2:3594464-3594483 None:intergenic 25.0%
! TTGTATTTAAAAGATGGTCT+CGG + Chr2:3598348-3598367 MsG0280006572.01.T02:intron 25.0%
! TTTAAAAGGATACAATCTTG+TGG + Chr2:3597648-3597667 MsG0280006572.01.T02:intron 25.0%
!! AAAGCTTATTGAAAGTATGA+GGG + Chr2:3591983-3592002 MsG0280006572.01.T02:five_prime_UTR 25.0%
!! ATAAATGGCAGTTGATATTA+AGG + Chr2:3595218-3595237 MsG0280006572.01.T02:intron 25.0%
!! ATTTAAGAATGTTGATTGAC+TGG + Chr2:3592295-3592314 MsG0280006572.01.T02:five_prime_UTR 25.0%
!! GTAAATTTTTGTACAAGTGA+TGG + Chr2:3592045-3592064 MsG0280006572.01.T02:five_prime_UTR 25.0%
!! GTTTGAAATGTCTTAATGTA+TGG + Chr2:3593501-3593520 MsG0280006572.01.T02:intron 25.0%
!! TATATTCACTTTCTTTTCTC+TGG + Chr2:3592661-3592680 MsG0280006572.01.T02:five_prime_UTR 25.0%
!! TCAATTTGAAGGTATAATTC+TGG + Chr2:3596162-3596181 MsG0280006572.01.T02:intron 25.0%
!! TGTAACTTTTAACAGATTTC+AGG + Chr2:3599106-3599125 MsG0280006572.01.T02:three_prime_UTR 25.0%
!! TGTGTTCTTTTATCATCATA+TGG + Chr2:3598156-3598175 MsG0280006572.01.T02:intron 25.0%
!! TTATCTTTTGTATGCAATGA+AGG + Chr2:3594671-3594690 MsG0280006572.01.T02:intron 25.0%
!! TTGATAATACTCAAAACTTG+TGG + Chr2:3592873-3592892 MsG0280006572.01.T02:intron 25.0%
!!! AAGAGTTTTGTGAAATGATT+TGG - Chr2:3598983-3599002 None:intergenic 25.0%
!!! ATGGTTTTGGTCAATAATTA+AGG + Chr2:3593567-3593586 MsG0280006572.01.T02:intron 25.0%
!!! CAATTTTTTTCAATTCCTTG+TGG - Chr2:3592470-3592489 None:intergenic 25.0%
!!! GGCTGTATTTTAATTGTTTT+AGG + Chr2:3599224-3599243 MsG0280006572.01.T02:three_prime_UTR 25.0%
!!! GTAGATAAAAGGTACTTATA+CGG - Chr2:3592792-3592811 None:intergenic 25.0%
!!! TATTATGTTGTTTGTTGTCT+TGG + Chr2:3598957-3598976 MsG0280006572.01.T02:three_prime_UTR 25.0%
!!! TCGTATTTTTTATTTGTCGA+CGG + Chr2:3593103-3593122 MsG0280006572.01.T02:intron 25.0%
!!! TCTATTTTTTGCAGATCATT+TGG + Chr2:3598693-3598712 MsG0280006572.01.T02:intron 25.0%
!!! TGAACCTTTTTTGTACATAA+TGG + Chr2:3595350-3595369 MsG0280006572.01.T02:intron 25.0%
!!! TTTCTGATTTTGTTTGTTGT+TGG + Chr2:3594249-3594268 MsG0280006572.01.T02:intron 25.0%
!!! TTTGAAGGTTTTTTCTCTAT+GGG + Chr2:3592235-3592254 MsG0280006572.01.T02:five_prime_UTR 25.0%
!!! TTTGATTTTCATGCAGTAAA+AGG + Chr2:3596227-3596246 MsG0280006572.01.T02:intron 25.0%
!!! TTTTAAGATGTCATAGTATC+AGG - Chr2:3593965-3593984 None:intergenic 25.0%
!!! TTTTGAAGGTTTTTTCTCTA+TGG + Chr2:3592234-3592253 MsG0280006572.01.T02:five_prime_UTR 25.0%
AAACAATTTCTCTCTCTTCT+AGG + Chr2:3598609-3598628 MsG0280006572.01.T02:intron 30.0%
AAAGGTGAAAGTTTATAACC+TGG - Chr2:3594103-3594122 None:intergenic 30.0%
AAAGTGACTACGAATTTACT+TGG - Chr2:3597215-3597234 None:intergenic 30.0%
AAAGTTATCTAAGAACCAAC+AGG + Chr2:3593045-3593064 MsG0280006572.01.T02:CDS 30.0%
AAGAGAAAAGAATGAAACTG+AGG - Chr2:3595519-3595538 None:intergenic 30.0%
AATCTGCAAATATCAAGAAG+AGG - Chr2:3598517-3598536 None:intergenic 30.0%
AATGTCTTATAGGACTTGAT+TGG + Chr2:3596630-3596649 MsG0280006572.01.T02:three_prime_UTR 30.0%
AATTGAGAGAGAGGAAATAT+TGG + Chr2:3592485-3592504 MsG0280006572.01.T02:five_prime_UTR 30.0%
AATTGTTTACCGAGAATCAT+TGG - Chr2:3598658-3598677 None:intergenic 30.0%
ACTAAATTATAGTTCGCACA+TGG - Chr2:3599562-3599581 None:intergenic 30.0%
ATAAACTTACCCTGTCTATT+TGG + Chr2:3598279-3598298 MsG0280006572.01.T02:intron 30.0%
ATAACCGTCAGAAATTTACA+TGG + Chr2:3599043-3599062 MsG0280006572.01.T02:three_prime_UTR 30.0%
ATCAAAAGACATAGTATGCA+AGG - Chr2:3597192-3597211 None:intergenic 30.0%
ATCAGAAGCAAAGGAAATTA+AGG + Chr2:3591835-3591854 MsG0280006572.01.T02:five_prime_UTR 30.0%
ATCAGCACACTTTATGATAA+AGG - Chr2:3597790-3597809 None:intergenic 30.0%
ATCCTAGAAGATTAACTGTA+AGG - Chr2:3598839-3598858 None:intergenic 30.0%
ATCTACTTGTGTGTCATATT+AGG + Chr2:3593466-3593485 MsG0280006572.01.T02:intron 30.0%
ATGAACAATGGAAAGGTTAA+AGG - Chr2:3594891-3594910 None:intergenic 30.0%
ATGGATGACAATCAATTTGA+AGG + Chr2:3596151-3596170 MsG0280006572.01.T02:three_prime_UTR 30.0%
ATGTCTTATAGGACTTGATT+GGG + Chr2:3596631-3596650 MsG0280006572.01.T02:three_prime_UTR 30.0%
ATGTTAATTGCATGTCAGAT+GGG + Chr2:3593616-3593635 MsG0280006572.01.T02:intron 30.0%
ATTCTATGATCTTGTACACA+TGG - Chr2:3593682-3593701 None:intergenic 30.0%
ATTGAAGGAGGATAAATGTA+TGG - Chr2:3595485-3595504 None:intergenic 30.0%
ATTGAGAGAGAGGAAATATT+GGG + Chr2:3592486-3592505 MsG0280006572.01.T02:five_prime_UTR 30.0%
CAATAAGCTTTCTCTGAATA+AGG - Chr2:3591974-3591993 None:intergenic 30.0%
CATTGTTCTTCATTCTAATG+TGG + Chr2:3592908-3592927 MsG0280006572.01.T02:five_prime_UTR 30.0%
CATTTAAACTGTTTGACCTT+GGG + Chr2:3594830-3594849 MsG0280006572.01.T02:CDS 30.0%
CGATATTGTTGAATCCATTA+TGG + Chr2:3595436-3595455 MsG0280006572.01.T02:intron 30.0%
CTATCTATATCTAATCGACA+TGG - Chr2:3593873-3593892 None:intergenic 30.0%
CTTCATGTCTAAAAAAGATG+AGG - Chr2:3595557-3595576 None:intergenic 30.0%
GAAACTATAGAAATTGAAGG+AGG - Chr2:3595497-3595516 None:intergenic 30.0%
GAAGCAACACAAATTACAAT+TGG + Chr2:3592720-3592739 MsG0280006572.01.T02:five_prime_UTR 30.0%
GAGAATCATTGGAATTACTA+TGG - Chr2:3598647-3598666 None:intergenic 30.0%
GAGGAAACTATAGAAATTGA+AGG - Chr2:3595500-3595519 None:intergenic 30.0%
GATTTAGACAGTTCAGTATA+AGG - Chr2:3595760-3595779 None:intergenic 30.0%
GCATGTTGATGTAATATGTA+TGG + Chr2:3599396-3599415 MsG0280006572.01.T02:three_prime_UTR 30.0%
GGTAAATCATTTCTGTTTGA+TGG + Chr2:3592066-3592085 MsG0280006572.01.T02:five_prime_UTR 30.0%
GGTGACAAAAAATGAAAGTT+AGG + Chr2:3593593-3593612 MsG0280006572.01.T02:intron 30.0%
GGTGGATAAAATTAGATTTG+TGG + Chr2:3596248-3596267 MsG0280006572.01.T02:intron 30.0%
GTCAGAAATTTACATGGTAA+TGG + Chr2:3599049-3599068 MsG0280006572.01.T02:three_prime_UTR 30.0%
GTTTGTTCAGTTTAATAGCT+GGG + Chr2:3593937-3593956 MsG0280006572.01.T02:intron 30.0%
TAATTATTGAAACCTCCACT+TGG - Chr2:3593819-3593838 None:intergenic 30.0%
TATACCTATAATTTGAGTCC+TGG - Chr2:3592768-3592787 None:intergenic 30.0%
TATGATGGCCAAGTTTATTA+TGG + Chr2:3593238-3593257 MsG0280006572.01.T02:CDS 30.0%
TATGTATTGTACAGAAGTTG+AGG + Chr2:3595716-3595735 MsG0280006572.01.T02:three_prime_UTR 30.0%
TATTGTTATGTTTGGCATCT+TGG + Chr2:3594221-3594240 MsG0280006572.01.T02:intron 30.0%
TCAGCACACTTTATGATAAA+GGG - Chr2:3597789-3597808 None:intergenic 30.0%
TCTGTGTTAATTTACCCTTT+AGG + Chr2:3594983-3595002 MsG0280006572.01.T02:intron 30.0%
TGATGCTCTCAATCTTAATT+TGG + Chr2:3594073-3594092 MsG0280006572.01.T02:CDS 30.0%
TGTTGAATCCATTATGGAAA+AGG + Chr2:3595442-3595461 MsG0280006572.01.T02:intron 30.0%
TGTTTGTTCAGTTTAATAGC+TGG + Chr2:3593936-3593955 MsG0280006572.01.T02:intron 30.0%
TTCCTTACAGTTAATCTTCT+AGG + Chr2:3598834-3598853 MsG0280006572.01.T02:three_prime_UTR 30.0%
TTTATGTTTGATTGCAGCAT+TGG + Chr2:3596585-3596604 MsG0280006572.01.T02:intron 30.0%
TTTCTCTTATACTTCTTCCT+TGG + Chr2:3595531-3595550 MsG0280006572.01.T02:intron 30.0%
TTTGGTCAATAATTAAGGTG+AGG + Chr2:3593572-3593591 MsG0280006572.01.T02:intron 30.0%
! AAATTGATTCTATGCAGGTT+TGG - Chr2:3595126-3595145 None:intergenic 30.0%
! CACATGTTCTGATTTCATTT+TGG + Chr2:3592817-3592836 MsG0280006572.01.T02:intron 30.0%
! CTTTGACTCTATTTGGATTT+TGG + Chr2:3597568-3597587 MsG0280006572.01.T02:intron 30.0%
! GAAAGCTTATTGAAAGTATG+AGG + Chr2:3591982-3592001 MsG0280006572.01.T02:five_prime_UTR 30.0%
! GACATAAATTGATTCTATGC+AGG - Chr2:3595131-3595150 None:intergenic 30.0%
! GCAGATTTAGTTCAAAGAAT+TGG + Chr2:3595919-3595938 MsG0280006572.01.T02:three_prime_UTR 30.0%
! GTTAAGAACCTTTTCCATAA+TGG - Chr2:3595453-3595472 None:intergenic 30.0%
! TAAACTTTCACCTTTGAGAA+AGG + Chr2:3594108-3594127 MsG0280006572.01.T02:intron 30.0%
! TAAATTCGTAGTCACTTTCT+AGG + Chr2:3597217-3597236 MsG0280006572.01.T02:intron 30.0%
! TATATAATCAAGTCTTGTGC+AGG + Chr2:3596988-3597007 MsG0280006572.01.T02:intron 30.0%
! TTATTGAAAGTATGAGGGTT+GGG + Chr2:3591988-3592007 MsG0280006572.01.T02:five_prime_UTR 30.0%
! TTTTATTCCATTAGGCCAAT+TGG + Chr2:3594191-3594210 MsG0280006572.01.T02:intron 30.0%
! TTTTCTAATGCCTTTCTCAA+AGG - Chr2:3594121-3594140 None:intergenic 30.0%
! TTTTGGTCATTTCTTAGTAC+TGG + Chr2:3596965-3596984 MsG0280006572.01.T02:intron 30.0%
! TTTTGTACTATAGCATATCG+CGG - Chr2:3596831-3596850 None:intergenic 30.0%
!! AATTTTGACATGTTTCATGC+AGG + Chr2:3594335-3594354 MsG0280006572.01.T02:intron 30.0%
!! AGAATTGATGACGAAACAAT+CGG - Chr2:3593757-3593776 None:intergenic 30.0%
!! ATTTTGACATGTTTCATGCA+GGG + Chr2:3594336-3594355 MsG0280006572.01.T02:intron 30.0%
!!! ATCTTTTTGGAACTAGACAA+TGG + Chr2:3598197-3598216 MsG0280006572.01.T02:intron 30.0%
!!! ATCTTTTTTAGACATGAAGG+AGG + Chr2:3595558-3595577 MsG0280006572.01.T02:intron 30.0%
!!! CTCATCTTTTTTAGACATGA+AGG + Chr2:3595555-3595574 MsG0280006572.01.T02:intron 30.0%
!!! TACCTTCTTTTTTTGTTGAC+TGG + Chr2:3592523-3592542 MsG0280006572.01.T02:five_prime_UTR 30.0%
!!! TTCTTTTCTCTGGTTTTGTT+TGG + Chr2:3592671-3592690 MsG0280006572.01.T02:five_prime_UTR 30.0%
AAAAAGAACTTCACCCACAA+TGG - Chr2:3593431-3593450 None:intergenic 35.0%
AACATTGAGTAATGCAGCTT+TGG + Chr2:3594923-3594942 MsG0280006572.01.T02:intron 35.0%
AACTCTGCTACACTATAGTA+TGG - Chr2:3596799-3596818 None:intergenic 35.0%
AAGAGATTAGGCAAGACATA+AGG + Chr2:3593705-3593724 MsG0280006572.01.T02:intron 35.0%
AAGTAAGTCTAACCTTGAAG+CGG - Chr2:3596697-3596716 None:intergenic 35.0%
AATCTTGTGGTGCATTTGAA+AGG + Chr2:3597661-3597680 MsG0280006572.01.T02:intron 35.0%
AATTGAAATTGGGGCTGAAA+AGG - Chr2:3591911-3591930 None:intergenic 35.0%
AATTTAGTGCAAAGTAGCAC+TGG + Chr2:3599574-3599593 MsG0280006572.01.T02:three_prime_UTR 35.0%
AATTTGTAACGTGTAGGCAA+AGG - Chr2:3594556-3594575 None:intergenic 35.0%
ACAATCGGATTTGCAGTTTA+TGG - Chr2:3593742-3593761 None:intergenic 35.0%
ACAGATAAACAGGAAAACAG+AGG - Chr2:3593365-3593384 None:intergenic 35.0%
ACAGGGTAAGTTTATTGAAG+AGG - Chr2:3598274-3598293 None:intergenic 35.0%
ACTACTGTTGATGTAGAGTT+AGG + Chr2:3598026-3598045 MsG0280006572.01.T02:intron 35.0%
AGATTGAGTATACCTAGACT+TGG + Chr2:3597310-3597329 MsG0280006572.01.T02:intron 35.0%
AGTTTCTCACAGGTGAAAAT+TGG + Chr2:3592442-3592461 MsG0280006572.01.T02:five_prime_UTR 35.0%
ATCACCAACAAAGCAATGAA+AGG - Chr2:3596509-3596528 None:intergenic 35.0%
ATTCTAATGTGGCAATGGAA+TGG + Chr2:3592919-3592938 MsG0280006572.01.T02:intron 35.0%
ATTGAAATTGGGGCTGAAAA+GGG - Chr2:3591910-3591929 None:intergenic 35.0%
ATTGCCAGGACTCAAATTAT+AGG + Chr2:3592761-3592780 MsG0280006572.01.T02:five_prime_UTR 35.0%
ATTTAGTGCAAAGTAGCACT+GGG + Chr2:3599575-3599594 MsG0280006572.01.T02:three_prime_UTR 35.0%
ATTTGAAGATGAGCACACAA+AGG - Chr2:3597857-3597876 None:intergenic 35.0%
CACCAGTCAACAAAAAAAGA+AGG - Chr2:3592528-3592547 None:intergenic 35.0%
CACTTGGATACTAAATCACA+CGG - Chr2:3592989-3593008 None:intergenic 35.0%
CAGATTGAAGCAATAGTTCA+AGG + Chr2:3594020-3594039 MsG0280006572.01.T02:intron 35.0%
CGGTAGGATAAATGTCTTAT+AGG + Chr2:3596620-3596639 MsG0280006572.01.T02:three_prime_UTR 35.0%
GAGTTGCGAAGAATATGTAA+TGG + Chr2:3592958-3592977 MsG0280006572.01.T02:CDS 35.0%
GATGTTAATTGCATGTCAGA+TGG + Chr2:3593615-3593634 MsG0280006572.01.T02:intron 35.0%
GCAACACAAATTACAATTGG+AGG + Chr2:3592723-3592742 MsG0280006572.01.T02:five_prime_UTR 35.0%
GCATTTAAACTGTTTGACCT+TGG + Chr2:3594829-3594848 MsG0280006572.01.T02:CDS 35.0%
GGAAAAACAAGAAGAATTGG+TGG + Chr2:3592023-3592042 MsG0280006572.01.T02:five_prime_UTR 35.0%
GGAGGAAAAACAAGAAGAAT+TGG + Chr2:3592020-3592039 MsG0280006572.01.T02:five_prime_UTR 35.0%
GGAGTTGAAAAATACTTGAG+TGG - Chr2:3598065-3598084 None:intergenic 35.0%
GGCATAACAGAATCTGTAAA+AGG - Chr2:3598496-3598515 None:intergenic 35.0%
GGTAATTAAGCGCTTTGATT+TGG + Chr2:3596409-3596428 MsG0280006572.01.T02:intron 35.0%
GTCATGATCTTAAGAAGAGA+AGG - Chr2:3595646-3595665 None:intergenic 35.0%
GTCTCTATAAACTTGAACAC+AGG - Chr2:3597904-3597923 None:intergenic 35.0%
GTTGTTGGATGTTTGTTCTT+TGG + Chr2:3594264-3594283 MsG0280006572.01.T02:intron 35.0%
GTTTGATGAATCTTATTGCC+AGG + Chr2:3592747-3592766 MsG0280006572.01.T02:five_prime_UTR 35.0%
TAATGGCATACTGAAGTTGA+AGG + Chr2:3595367-3595386 MsG0280006572.01.T02:intron 35.0%
TACATACTGATAGATCCAAG+TGG + Chr2:3593801-3593820 MsG0280006572.01.T02:intron 35.0%
TACTATAGTGTAGCAGAGTT+TGG + Chr2:3596799-3596818 MsG0280006572.01.T02:intron 35.0%
TATCTAATCGACATGGCAAA+TGG - Chr2:3593866-3593885 None:intergenic 35.0%
TCCACAAATTGCTTTCTACA+AGG + Chr2:3593315-3593334 MsG0280006572.01.T02:CDS 35.0%
TCTTCATTCTAATGTGGCAA+TGG + Chr2:3592914-3592933 MsG0280006572.01.T02:five_prime_UTR 35.0%
TGCTTTGCATATTCCATTGT+GGG + Chr2:3593415-3593434 MsG0280006572.01.T02:intron 35.0%
TGGGTTGTCAGATGTAATAT+GGG + Chr2:3593644-3593663 MsG0280006572.01.T02:intron 35.0%
TGTAGTTTCTATGTCTGCTT+TGG + Chr2:3596543-3596562 MsG0280006572.01.T02:intron 35.0%
TGTCACATACGTGATGTAAT+GGG + Chr2:3593382-3593401 MsG0280006572.01.T02:intron 35.0%
TGTGAAAAGGGAAGAGAAAA+GGG - Chr2:3597258-3597277 None:intergenic 35.0%
TGTTAATTGCATGTCAGATG+GGG + Chr2:3593617-3593636 MsG0280006572.01.T02:intron 35.0%
TTACACTAGCATCATGCTAT+TGG + Chr2:3597021-3597040 MsG0280006572.01.T02:intron 35.0%
TTACCTTCTGATTGTAAACC+CGG - Chr2:3594427-3594446 None:intergenic 35.0%
TTAGAAAGAGAAGGAATCCA+AGG - Chr2:3598768-3598787 None:intergenic 35.0%
TTCTAATGTGGCAATGGAAT+GGG + Chr2:3592920-3592939 MsG0280006572.01.T02:intron 35.0%
TTCTCTTCAGATGTCTTTGT+CGG - Chr2:3594710-3594729 None:intergenic 35.0%
TTGATCATGTAGTTTCTCAC+AGG + Chr2:3592432-3592451 MsG0280006572.01.T02:five_prime_UTR 35.0%
TTGGATTCCTTCTCTTTCTA+AGG + Chr2:3598767-3598786 MsG0280006572.01.T02:three_prime_UTR 35.0%
TTGTGAAAAGGGAAGAGAAA+AGG - Chr2:3597259-3597278 None:intergenic 35.0%
TTTGCCCATTGCAAATGTTT+CGG + Chr2:3598468-3598487 MsG0280006572.01.T02:intron 35.0%
TTTGCTGATACTTTGTTCAC+TGG + Chr2:3598375-3598394 MsG0280006572.01.T02:intron 35.0%
TTTGTACTATAGCATATCGC+GGG - Chr2:3596830-3596849 None:intergenic 35.0%
! AAATACTCCAATTGGCCTAA+TGG - Chr2:3594201-3594220 None:intergenic 35.0%
! ACAGTAGTGTATTCCTCTTT+TGG - Chr2:3598014-3598033 None:intergenic 35.0%
! ACTTTTGCTGGTCAATGTTA+TGG - Chr2:3593030-3593049 None:intergenic 35.0%
! AGTTTATTGAAGAGGTGTAG+AGG - Chr2:3598266-3598285 None:intergenic 35.0%
! ATATTTTGTCCACCGGTATT+CGG + Chr2:3596344-3596363 MsG0280006572.01.T02:intron 35.0%
! ATTCTATGCAGGTTTGGTTT+GGG - Chr2:3595120-3595139 None:intergenic 35.0%
! CAATCTTAATTTGGAAAGCC+AGG + Chr2:3594082-3594101 MsG0280006572.01.T02:CDS 35.0%
! CTGAGTAGTCACACTTTTAA+AGG + Chr2:3598425-3598444 MsG0280006572.01.T02:intron 35.0%
! CTTATTGAAAGTATGAGGGT+TGG + Chr2:3591987-3592006 MsG0280006572.01.T02:five_prime_UTR 35.0%
! GATTTTCATGCAGTAAAAGG+TGG + Chr2:3596230-3596249 MsG0280006572.01.T02:intron 35.0%
! GGTTCTTAGATAACTTTTGC+TGG - Chr2:3593042-3593061 None:intergenic 35.0%
! TAAGAAAGAGTGCATGCATT+AGG + Chr2:3597514-3597533 MsG0280006572.01.T02:intron 35.0%
!! AGGAAATATTGGGTTTTGTC+TGG + Chr2:3592496-3592515 MsG0280006572.01.T02:five_prime_UTR 35.0%
!! ATCTCAGATTTTGGTGACTT+TGG + Chr2:3592336-3592355 MsG0280006572.01.T02:five_prime_UTR 35.0%
!! GAGTGTTGTGTTAGTAGTTT+TGG + Chr2:3596285-3596304 MsG0280006572.01.T02:intron 35.0%
!! TAAACTGATTTGGGCTGTTT+GGG + Chr2:3594297-3594316 MsG0280006572.01.T02:intron 35.0%
!! TACTTTGAGGAAGTACTACA+TGG - Chr2:3598794-3598813 None:intergenic 35.0%
!! TTAAACTGATTTGGGCTGTT+TGG + Chr2:3594296-3594315 MsG0280006572.01.T02:intron 35.0%
AAAACAGCTGAACAGAGAGA+GGG + Chr2:3591678-3591697 MsG0280006572.01.T02:five_prime_UTR 40.0%
AAACTTATTCGCCAAGAACC+AGG - Chr2:3598095-3598114 None:intergenic 40.0%
AACCTCATAGGTCATGTTGT+CGG - Chr2:3598735-3598754 None:intergenic 40.0%
ACATGGTCCTTAGAAAGAGA+AGG - Chr2:3598777-3598796 None:intergenic 40.0%
AGCAGACATAGAAACTACAG+TGG - Chr2:3596542-3596561 None:intergenic 40.0%
AGGAACCGAAACATTTGCAA+TGG - Chr2:3598476-3598495 None:intergenic 40.0%
AGGAGATGGGAAGATTGATA+TGG + Chr2:3595591-3595610 MsG0280006572.01.T02:CDS 40.0%
AGGAGCTCTTTGACTCTATT+TGG + Chr2:3597561-3597580 MsG0280006572.01.T02:intron 40.0%
AGGTGAAAATTGGAACCACA+AGG + Chr2:3592452-3592471 MsG0280006572.01.T02:five_prime_UTR 40.0%
AGTTCAATATCTCACCAGCA+TGG + Chr2:3599141-3599160 MsG0280006572.01.T02:three_prime_UTR 40.0%
ATACTGATAGATCCAAGTGG+AGG + Chr2:3593804-3593823 MsG0280006572.01.T02:intron 40.0%
ATTCTTCCTTCAGGATCATG+AGG - Chr2:3599025-3599044 None:intergenic 40.0%
CACGTATGTGACAGATAAAC+AGG - Chr2:3593375-3593394 None:intergenic 40.0%
CATACTGAAGTTGAAGGAGA+TGG + Chr2:3595373-3595392 MsG0280006572.01.T02:intron 40.0%
CCAAAACAAAACCCGAATAC+CGG - Chr2:3596359-3596378 None:intergenic 40.0%
CCTTTGCTTCTGATGCAAAT+CGG - Chr2:3591829-3591848 None:intergenic 40.0%
CGTGTGATTTAGTATCCAAG+TGG + Chr2:3592987-3593006 MsG0280006572.01.T02:CDS 40.0%
CTATACTTGTGCTCCTTATG+TGG + Chr2:3595981-3596000 MsG0280006572.01.T02:three_prime_UTR 40.0%
CTGCTTTGCATATTCCATTG+TGG + Chr2:3593414-3593433 MsG0280006572.01.T02:intron 40.0%
CTGGGTTGTCAGATGTAATA+TGG + Chr2:3593643-3593662 MsG0280006572.01.T02:intron 40.0%
CTGGTCAATGTTATGGTAGT+AGG - Chr2:3593023-3593042 None:intergenic 40.0%
CTGTCACATACGTGATGTAA+TGG + Chr2:3593381-3593400 MsG0280006572.01.T02:intron 40.0%
GACATGAATCAGTCACACAA+AGG - Chr2:3599086-3599105 None:intergenic 40.0%
GCAGACATAGAAACTACAGT+GGG - Chr2:3596541-3596560 None:intergenic 40.0%
GCCTTGTAGAAAGCAATTTG+TGG - Chr2:3593319-3593338 None:intergenic 40.0%
GGAACCGAAACATTTGCAAT+GGG - Chr2:3598475-3598494 None:intergenic 40.0%
GGAAGATTGATATGGAAGAG+TGG + Chr2:3595599-3595618 MsG0280006572.01.T02:CDS 40.0%
GGTTCTCAATCTAACCTCAT+AGG - Chr2:3598747-3598766 None:intergenic 40.0%
GTATGGTATTTCATGTGACG+TGG + Chr2:3599413-3599432 MsG0280006572.01.T02:three_prime_UTR 40.0%
GTCTAAAAAAGATGAGGCCA+AGG - Chr2:3595551-3595570 None:intergenic 40.0%
GTTTGGATTCACGCTGAATT+TGG + Chr2:3595019-3595038 MsG0280006572.01.T02:intron 40.0%
TAAGATGGAGTCATACCTGT+TGG - Chr2:3593063-3593082 None:intergenic 40.0%
TACGCCTTTCATTGCTTTGT+TGG + Chr2:3596502-3596521 MsG0280006572.01.T02:intron 40.0%
TAGTATCCAAGTGGAAGCTA+TGG + Chr2:3592996-3593015 MsG0280006572.01.T02:CDS 40.0%
TCACTTGAACTTAGAGCAAG+TGG + Chr2:3595952-3595971 MsG0280006572.01.T02:three_prime_UTR 40.0%
TCAGATGAACAATCCAAGCT+GGG + Chr2:3593277-3593296 MsG0280006572.01.T02:CDS 40.0%
TCCTTCTTGCCAAATAGACA+GGG - Chr2:3598291-3598310 None:intergenic 40.0%
TGAGGTTAGATTGAGAACCT+TGG + Chr2:3598748-3598767 MsG0280006572.01.T02:three_prime_UTR 40.0%
TGATGCCTTACAACCACATA+AGG - Chr2:3595997-3596016 None:intergenic 40.0%
TGCGAAGAATATGTAATGGC+TGG + Chr2:3592962-3592981 MsG0280006572.01.T02:CDS 40.0%
TTCAGATGAACAATCCAAGC+TGG + Chr2:3593276-3593295 MsG0280006572.01.T02:CDS 40.0%
TTCCTTCTTGCCAAATAGAC+AGG - Chr2:3598292-3598311 None:intergenic 40.0%
TTGTGTGCTCTGATATGTGA+AGG + Chr2:3596437-3596456 MsG0280006572.01.T02:intron 40.0%
TTTAGTGCAAAGTAGCACTG+GGG + Chr2:3599576-3599595 MsG0280006572.01.T02:three_prime_UTR 40.0%
TTTGTCGACGGAAATAGTTG+AGG + Chr2:3593115-3593134 MsG0280006572.01.T02:intron 40.0%
! AGCTTGCTTGAAAGAAAGAC+AGG + Chr2:3596099-3596118 MsG0280006572.01.T02:three_prime_UTR 40.0%
! AGGTTGACTCAAAAGGAGAT+GGG + Chr2:3595578-3595597 MsG0280006572.01.T02:CDS 40.0%
! ATGAAGGAGGTTGACTCAAA+AGG + Chr2:3595571-3595590 MsG0280006572.01.T02:CDS 40.0%
! GATTCTATGCAGGTTTGGTT+TGG - Chr2:3595121-3595140 None:intergenic 40.0%
! GGCTGCATTGATCAATATGA+TGG + Chr2:3593223-3593242 MsG0280006572.01.T02:CDS 40.0%
! TATTTTCACCCTCCAAAGCA+TGG - Chr2:3597932-3597951 None:intergenic 40.0%
! TATTTTGTCCACCGGTATTC+GGG + Chr2:3596345-3596364 MsG0280006572.01.T02:intron 40.0%
! TGAGTATACCTAGACTTGGT+TGG + Chr2:3597314-3597333 MsG0280006572.01.T02:intron 40.0%
!! AAACTGATTTGGGCTGTTTG+GGG + Chr2:3594298-3594317 MsG0280006572.01.T02:intron 40.0%
!! AAGATTGAGAGCATCAATGC+TGG - Chr2:3594069-3594088 None:intergenic 40.0%
!! TTCTATGCAGGTTTGGTTTG+GGG - Chr2:3595119-3595138 None:intergenic 40.0%
!!! AGCATTGGCAAGTTTTGTTG+CGG + Chr2:3596600-3596619 MsG0280006572.01.T02:intron 40.0%
!!! GGTTTTGTTTGGTGACAGAT+TGG + Chr2:3592682-3592701 MsG0280006572.01.T02:five_prime_UTR 40.0%
!!! TGGCAAACTCACGTTGATTT+TGG + Chr2:3595039-3595058 MsG0280006572.01.T02:intron 40.0%
AAACAAAACCCGAATACCGG+TGG - Chr2:3596356-3596375 None:intergenic 45.0%
AAACAGCTGAACAGAGAGAG+GGG + Chr2:3591679-3591698 MsG0280006572.01.T02:five_prime_UTR 45.0%
AAATTGGGGCTGAAAAGGGT+GGG - Chr2:3591906-3591925 None:intergenic 45.0%
ACCCTGTCTATTTGGCAAGA+AGG + Chr2:3598287-3598306 MsG0280006572.01.T02:intron 45.0%
ACCTCATAGGTCATGTTGTC+GGG - Chr2:3598734-3598753 None:intergenic 45.0%
ACCTGCACTCTATCTCCTAA+AGG - Chr2:3595001-3595020 None:intergenic 45.0%
ATGAGGGTTGGGTTTGCAAT+TGG + Chr2:3591999-3592018 MsG0280006572.01.T02:five_prime_UTR 45.0%
ATGTGTCCTCATGATCCTGA+AGG + Chr2:3599016-3599035 MsG0280006572.01.T02:three_prime_UTR 45.0%
CAATCTAATCACTTCCAGCC+AGG + Chr2:3596665-3596684 MsG0280006572.01.T02:three_prime_UTR 45.0%
CAATGTATCCAGTCTTCCCA+AGG - Chr2:3594849-3594868 None:intergenic 45.0%
CATTGAGTTCGCGCATCATT+TGG + Chr2:3599203-3599222 MsG0280006572.01.T02:three_prime_UTR 45.0%
CATTGTCAGTATGCCATCCA+TGG - Chr2:3599444-3599463 None:intergenic 45.0%
CCTGCACTCTATCTCCTAAA+GGG - Chr2:3595000-3595019 None:intergenic 45.0%
CTGACGGTTATTCTTCCTTC+AGG - Chr2:3599034-3599053 None:intergenic 45.0%
GAAAACAGCTGAACAGAGAG+AGG + Chr2:3591677-3591696 MsG0280006572.01.T02:five_prime_UTR 45.0%
GAAGTTGAAGGAGATGGTCT+TGG + Chr2:3595379-3595398 MsG0280006572.01.T02:intron 45.0%
GAATTACTATGGCGTCTTCG+TGG - Chr2:3598636-3598655 None:intergenic 45.0%
GACATGGCAAATGGAAGAAG+AGG - Chr2:3593857-3593876 None:intergenic 45.0%
GCTAACAACCAACCAAGTCT+AGG - Chr2:3597325-3597344 None:intergenic 45.0%
GCTGGTGAGATATTGAACTG+AGG - Chr2:3599140-3599159 None:intergenic 45.0%
GGAGATAAAACCATCTGCAG+TGG - Chr2:3594048-3594067 None:intergenic 45.0%
GGTATTTCATGTGACGTGGT+TGG + Chr2:3599417-3599436 MsG0280006572.01.T02:three_prime_UTR 45.0%
GTGCTCCTTATGTGGTTGTA+AGG + Chr2:3595989-3596008 MsG0280006572.01.T02:three_prime_UTR 45.0%
TAGAGACCTAAGCCATGCTT+TGG + Chr2:3597917-3597936 MsG0280006572.01.T02:intron 45.0%
TAGGAGATAGAGTGCAGGTT+TGG + Chr2:3595002-3595021 MsG0280006572.01.T02:intron 45.0%
TAGTACGCTAGCTCAGTGTT+GGG + Chr2:3599374-3599393 MsG0280006572.01.T02:three_prime_UTR 45.0%
TCGAGGGAAACAGAAAAGAG+CGG + Chr2:3591703-3591722 MsG0280006572.01.T02:five_prime_UTR 45.0%
TCTGACACATTTGTCCATGC+TGG - Chr2:3599158-3599177 None:intergenic 45.0%
TGATGCAAATCGGTGCAGAT+CGG - Chr2:3591819-3591838 None:intergenic 45.0%
TGGATACATTGAGCATAGCG+AGG + Chr2:3594858-3594877 MsG0280006572.01.T02:CDS 45.0%
TGTGCTCTGATATGTGAAGG+CGG + Chr2:3596440-3596459 MsG0280006572.01.T02:intron 45.0%
TTAGTACGCTAGCTCAGTGT+TGG + Chr2:3599373-3599392 MsG0280006572.01.T02:three_prime_UTR 45.0%
TTATTCGCCAAGAACCAGGA+AGG - Chr2:3598091-3598110 None:intergenic 45.0%
TTCTGATTGTAAACCCGGAG+CGG - Chr2:3594422-3594441 None:intergenic 45.0%
TTGGGTGAGTGAGAAAAGAG+AGG - Chr2:3591881-3591900 None:intergenic 45.0%
! CCGATTTGCATCAGAAGCAA+AGG + Chr2:3591826-3591845 MsG0280006572.01.T02:five_prime_UTR 45.0%
! GAGGTTGACTCAAAAGGAGA+TGG + Chr2:3595577-3595596 MsG0280006572.01.T02:CDS 45.0%
! GCAGCTTTGGCAAAATCACA+TGG + Chr2:3594936-3594955 MsG0280006572.01.T02:intron 45.0%
! TTTTCAACTCCACACCTTCC+TGG + Chr2:3598074-3598093 MsG0280006572.01.T02:intron 45.0%
!! CATGCTAACTTTGAGTTGCG+TGG + Chr2:3593202-3593221 MsG0280006572.01.T02:CDS 45.0%
!! TAGATGACCTTGCTGTTCGA+CGG + Chr2:3594384-3594403 MsG0280006572.01.T02:intron 45.0%
!!! CCGGTATTCGGGTTTTGTTT+TGG + Chr2:3596356-3596375 MsG0280006572.01.T02:intron 45.0%
!!! TTGGCAAGTTTTGTTGCGGT+AGG + Chr2:3596604-3596623 MsG0280006572.01.T02:three_prime_UTR 45.0%
!! AAATTAAATAAAAAGAAAAA+AGG - Chr2:3599354-3599373 None:intergenic 5.0%
!! TTGTTAATTATTAAAATAAT+TGG - Chr2:3599632-3599651 None:intergenic 5.0%
!!! AATTTTAAATTAGAAAAAAA+AGG - Chr2:3597142-3597161 None:intergenic 5.0%
!!! ATTTTAAATTAGAAAAAAAA+GGG - Chr2:3597141-3597160 None:intergenic 5.0%
AACAGCTGAACAGAGAGAGG+GGG + Chr2:3591680-3591699 MsG0280006572.01.T02:five_prime_UTR 50.0%
AATTGGGGCTGAAAAGGGTG+GGG - Chr2:3591905-3591924 None:intergenic 50.0%
AGACCTAAGCCATGCTTTGG+AGG + Chr2:3597920-3597939 MsG0280006572.01.T02:intron 50.0%
AGAGGGACGACAGAGAGAAA+GGG + Chr2:3591753-3591772 MsG0280006572.01.T02:five_prime_UTR 50.0%
AGGGTTGGGTTTGCAATTGG+AGG + Chr2:3592002-3592021 MsG0280006572.01.T02:five_prime_UTR 50.0%
CAACCCCAGCATTGTGTTCT+AGG - Chr2:3599253-3599272 None:intergenic 50.0%
CTGTTTGACCTTGGGAAGAC+TGG + Chr2:3594838-3594857 MsG0280006572.01.T02:CDS 50.0%
GAAAAGAGCGGAACAGAGAG+AGG + Chr2:3591715-3591734 MsG0280006572.01.T02:five_prime_UTR 50.0%
GAAATTGGGGCTGAAAAGGG+TGG - Chr2:3591907-3591926 None:intergenic 50.0%
GAGCCTAGAACACAATGCTG+GGG + Chr2:3599247-3599266 MsG0280006572.01.T02:three_prime_UTR 50.0%
GCTCCGGGTTTACAATCAGA+AGG + Chr2:3594421-3594440 MsG0280006572.01.T02:intron 50.0%
GGAGCCTAGAACACAATGCT+GGG + Chr2:3599246-3599265 MsG0280006572.01.T02:three_prime_UTR 50.0%
GTAGGACCATAGCTTCCACT+TGG - Chr2:3593005-3593024 None:intergenic 50.0%
GTTCAAGGAACCACTGCAGA+TGG + Chr2:3594035-3594054 MsG0280006572.01.T02:CDS 50.0%
TCCCGACAACATGACCTATG+AGG + Chr2:3598730-3598749 MsG0280006572.01.T02:three_prime_UTR 50.0%
TGTACACTTTGTGCCCAGCT+TGG - Chr2:3593293-3593312 None:intergenic 50.0%
TTCTCTGATCCTCGTGTGCA+AGG - Chr2:3599278-3599297 None:intergenic 50.0%
! CCCTTTAGGAGATAGAGTGC+AGG + Chr2:3594997-3595016 MsG0280006572.01.T02:intron 50.0%
! GACCTAAGCCATGCTTTGGA+GGG + Chr2:3597921-3597940 MsG0280006572.01.T02:intron 50.0%
! GGCTGTTTGGGGACTGTTTT+TGG + Chr2:3594309-3594328 MsG0280006572.01.T02:intron 50.0%
!! GGACAGCATTGGCAGAATCA+CGG - Chr2:3595098-3595117 None:intergenic 50.0%
!! GTTTGGTTTGGGGACAGCAT+TGG - Chr2:3595109-3595128 None:intergenic 50.0%
AAGAGCGGAACAGAGAGAGG+TGG + Chr2:3591718-3591737 MsG0280006572.01.T02:five_prime_UTR 55.0%
ACCTTGAAGCGGATGACTCC+TGG - Chr2:3596686-3596705 None:intergenic 55.0%
ATCGGTGCAGATCGGAGTGT+TGG - Chr2:3591811-3591830 None:intergenic 55.0%
CACCCTCCAAAGCATGGCTT+AGG - Chr2:3597926-3597945 None:intergenic 55.0%
GAACAGAGAGAGGTGGTCGA+GGG + Chr2:3591725-3591744 MsG0280006572.01.T02:five_prime_UTR 55.0%
GAGAGGGACGACAGAGAGAA+AGG + Chr2:3591752-3591771 MsG0280006572.01.T02:five_prime_UTR 55.0%
GCATGTCAGATGGGGTTGCT+GGG + Chr2:3593625-3593644 MsG0280006572.01.T02:intron 55.0%
GCGAATTCCGTCGAACAGCA+AGG - Chr2:3594394-3594413 None:intergenic 55.0%
GGCTGAAAAGGGTGGGGTTT+GGG - Chr2:3591899-3591918 None:intergenic 55.0%
GGGAGCCTAGAACACAATGC+TGG + Chr2:3599245-3599264 MsG0280006572.01.T02:three_prime_UTR 55.0%
TGATTGTAAACCCGGAGCGG+CGG - Chr2:3594419-3594438 None:intergenic 55.0%
TGCATGTCAGATGGGGTTGC+TGG + Chr2:3593624-3593643 MsG0280006572.01.T02:intron 55.0%
! CATGTGACGTGGTTGGTCCA+TGG + Chr2:3599424-3599443 MsG0280006572.01.T02:three_prime_UTR 55.0%
! CTCCACACCTTCCTGGTTCT+TGG + Chr2:3598081-3598100 MsG0280006572.01.T02:intron 55.0%
! TGACGTGGTTGGTCCATGGA+TGG + Chr2:3599428-3599447 MsG0280006572.01.T02:three_prime_UTR 55.0%
!! GTGCAGATCGGAGTGTTGGA+CGG - Chr2:3591807-3591826 None:intergenic 55.0%
CGCCAAGAACCAGGAAGGTG+TGG - Chr2:3598086-3598105 None:intergenic 60.0%
GAACAGAGAGAGGGGGTCGA+GGG + Chr2:3591687-3591706 MsG0280006572.01.T02:five_prime_UTR 60.0%
GCCAGGAGTCATCCGCTTCA+AGG + Chr2:3596682-3596701 MsG0280006572.01.T02:three_prime_UTR 60.0%
GGAACAGAGAGAGGTGGTCG+AGG + Chr2:3591724-3591743 MsG0280006572.01.T02:five_prime_UTR 60.0%
GGGCTGAAAAGGGTGGGGTT+TGG - Chr2:3591900-3591919 None:intergenic 60.0%
GTGTTGGACGGTGAGGTCGA+CGG - Chr2:3591795-3591814 None:intergenic 60.0%
TGAACAGAGAGAGGGGGTCG+AGG + Chr2:3591686-3591705 MsG0280006572.01.T02:five_prime_UTR 60.0%
TGAAGCGGATGACTCCTGGC+TGG - Chr2:3596682-3596701 None:intergenic 60.0%
!! GATCGGAGTGTTGGACGGTG+AGG - Chr2:3591802-3591821 None:intergenic 60.0%
AGGTGGTCGAGGGAGAGGAG+AGG + Chr2:3591735-3591754 MsG0280006572.01.T02:five_prime_UTR 65.0%
GAATTCGCTTCCGCCGCTCC+GGG + Chr2:3594406-3594425 MsG0280006572.01.T02:intron 65.0%
GAGAGAGGTGGTCGAGGGAG+AGG + Chr2:3591730-3591749 MsG0280006572.01.T02:five_prime_UTR 65.0%
GGAATTCGCTTCCGCCGCTC+CGG + Chr2:3594405-3594424 MsG0280006572.01.T02:intron 65.0%
GGGGTTGAGCCTTGCACACG+AGG + Chr2:3599266-3599285 MsG0280006572.01.T02:three_prime_UTR 65.0%
GGTGGTCGAGGGAGAGGAGA+GGG + Chr2:3591736-3591755 MsG0280006572.01.T02:five_prime_UTR 65.0%
TTGGACGGTGAGGTCGACGG+CGG - Chr2:3591792-3591811 None:intergenic 65.0%
GTGAGGTCGACGGCGGCGAA+CGG - Chr2:3591785-3591804 None:intergenic 70.0%
AGGTCGACGGCGGCGAACGG+CGG - Chr2:3591782-3591801 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 3591671 3599699 3591671 ID=MsG0280006572.01;Name=MsG0280006572.01
Chr2 mRNA 3591671 3599687 3591671 ID=MsG0280006572.01.T01;Parent=MsG0280006572.01;Name=MsG0280006572.01.T01;_AED=0.36;_eAED=0.37;_QI=410|0.7|0.81|1|0.1|0.18|11|1608|186
Chr2 five_prime_UTR 3591671 3591856 3591671 ID=MsG0280006572.01.T01:five_prime_utr;Parent=MsG0280006572.01.T01
Chr2 five_prime_UTR 3591942 3592044 3591942 ID=MsG0280006572.01.T01:five_prime_utr;Parent=MsG0280006572.01.T01
Chr2 five_prime_UTR 3592700 3592782 3592700 ID=MsG0280006572.01.T01:five_prime_utr;Parent=MsG0280006572.01.T01
Chr2 five_prime_UTR 3592900 3592937 3592900 ID=MsG0280006572.01.T01:five_prime_utr;Parent=MsG0280006572.01.T01
Chr2 CDS 3592938 3593066 3592938 ID=MsG0280006572.01.T01:cds;Parent=MsG0280006572.01.T01
Chr2 CDS 3593196 3593342 3593196 ID=MsG0280006572.01.T01:cds;Parent=MsG0280006572.01.T01
Chr2 CDS 3594023 3594103 3594023 ID=MsG0280006572.01.T01:cds;Parent=MsG0280006572.01.T01
Chr2 CDS 3594796 3594883 3594796 ID=MsG0280006572.01.T01:cds;Parent=MsG0280006572.01.T01
Chr2 CDS 3595569 3595684 3595569 ID=MsG0280006572.01.T01:cds;Parent=MsG0280006572.01.T01
Chr2 three_prime_UTR 3595685 3596172 3595685 ID=MsG0280006572.01.T01:three_prime_utr;Parent=MsG0280006572.01.T01
Chr2 three_prime_UTR 3596602 3596703 3596602 ID=MsG0280006572.01.T01:three_prime_utr;Parent=MsG0280006572.01.T01
Chr2 three_prime_UTR 3598631 3598667 3598631 ID=MsG0280006572.01.T01:three_prime_utr;Parent=MsG0280006572.01.T01
Chr2 three_prime_UTR 3598707 3599687 3598707 ID=MsG0280006572.01.T01:three_prime_utr;Parent=MsG0280006572.01.T01
Chr2 mRNA 3591671 3599687 3591671 ID=MsG0280006572.01.T02;Parent=MsG0280006572.01;Name=MsG0280006572.01.T02;_AED=0.33;_eAED=0.34;_QI=1026|0.66|0.8|1|0.11|0.2|10|1608|186
Chr2 exon 3591981 3592782 3591981 ID=MsG0280006572.01.T02:exon:1711;Parent=MsG0280006572.01.T02
Chr2 five_prime_UTR 3591671 3591856 3591671 ID=MsG0280006572.01.T02:five_prime_utr;Parent=MsG0280006572.01.T02
Chr2 five_prime_UTR 3591981 3592782 3591981 ID=MsG0280006572.01.T02:five_prime_utr;Parent=MsG0280006572.01.T02
Chr2 five_prime_UTR 3592900 3592937 3592900 ID=MsG0280006572.01.T02:five_prime_utr;Parent=MsG0280006572.01.T02
Chr2 CDS 3592938 3593066 3592938 ID=MsG0280006572.01.T02:cds;Parent=MsG0280006572.01.T02
Chr2 CDS 3593196 3593342 3593196 ID=MsG0280006572.01.T02:cds;Parent=MsG0280006572.01.T02
Chr2 CDS 3594023 3594103 3594023 ID=MsG0280006572.01.T02:cds;Parent=MsG0280006572.01.T02
Chr2 CDS 3594796 3594883 3594796 ID=MsG0280006572.01.T02:cds;Parent=MsG0280006572.01.T02
Chr2 CDS 3595569 3595684 3595569 ID=MsG0280006572.01.T02:cds;Parent=MsG0280006572.01.T02
Chr2 three_prime_UTR 3595685 3596172 3595685 ID=MsG0280006572.01.T02:three_prime_utr;Parent=MsG0280006572.01.T02
Chr2 three_prime_UTR 3596602 3596703 3596602 ID=MsG0280006572.01.T02:three_prime_utr;Parent=MsG0280006572.01.T02
Chr2 three_prime_UTR 3598631 3598667 3598631 ID=MsG0280006572.01.T02:three_prime_utr;Parent=MsG0280006572.01.T02
Chr2 three_prime_UTR 3598707 3599687 3598707 ID=MsG0280006572.01.T02:three_prime_utr;Parent=MsG0280006572.01.T02
Chr2 mRNA 3591671 3599699 3591671 ID=MsG0280006572.01.T03;Parent=MsG0280006572.01;Name=MsG0280006572.01.T03;_AED=0.26;_eAED=0.26;_QI=410|0.62|0.77|1|0.12|0.11|9|3586|186
Chr2 exon 3596602 3599699 3596602 ID=MsG0280006572.01.T03:exon:1712;Parent=MsG0280006572.01.T03
Chr2 five_prime_UTR 3591671 3591856 3591671 ID=MsG0280006572.01.T03:five_prime_utr;Parent=MsG0280006572.01.T03
Chr2 five_prime_UTR 3591942 3592044 3591942 ID=MsG0280006572.01.T03:five_prime_utr;Parent=MsG0280006572.01.T03
Chr2 five_prime_UTR 3592700 3592782 3592700 ID=MsG0280006572.01.T03:five_prime_utr;Parent=MsG0280006572.01.T03
Chr2 five_prime_UTR 3592900 3592937 3592900 ID=MsG0280006572.01.T03:five_prime_utr;Parent=MsG0280006572.01.T03
Chr2 CDS 3592938 3593066 3592938 ID=MsG0280006572.01.T03:cds;Parent=MsG0280006572.01.T03
Chr2 CDS 3593196 3593342 3593196 ID=MsG0280006572.01.T03:cds;Parent=MsG0280006572.01.T03
Chr2 CDS 3594023 3594103 3594023 ID=MsG0280006572.01.T03:cds;Parent=MsG0280006572.01.T03
Chr2 CDS 3594796 3594883 3594796 ID=MsG0280006572.01.T03:cds;Parent=MsG0280006572.01.T03
Chr2 CDS 3595569 3595684 3595569 ID=MsG0280006572.01.T03:cds;Parent=MsG0280006572.01.T03
Chr2 three_prime_UTR 3595685 3596172 3595685 ID=MsG0280006572.01.T03:three_prime_utr;Parent=MsG0280006572.01.T03
Chr2 three_prime_UTR 3596602 3599699 3596602 ID=MsG0280006572.01.T03:three_prime_utr;Parent=MsG0280006572.01.T03
Gene Sequence

>MsG0280006572.01.T02

ATGGGTAGTTATTCGAGTTTGAGTTGCGAAGAATATGTAATGGCTGGTCCGTGTGATTTAGTATCCAAGTGGAAGCTATGGTCCTACTACCATAACATTGACCAGCAAAAGTTATCTAAGAACCAACAGAAATTTCATGCTAACTTTGAGTTGCGTGGCTGCATTGATCAATATGATGGCCAAGTTTATTATGGAGTAATCAATACTGTTTCAGATGAACAATCCAAGCTGGGCACAAAGTGTACAATTCCACAAATTGCTTTCTACAAGGCCATTATTGAAGCAATAGTTCAAGGAACCACTGCAGATGGTTTTATCTCCAGCATTGATGCTCTCAATCTTAATTTGGAAAGCCAGCTTGACAGTGCCATATTTTTTGCTCTTACAGTTGCATTTAAACTGTTTGACCTTGGGAAGACTGGATACATTGAGCATAGCGAGGTGAACATGAAGGAGGTTGACTCAAAAGGAGATGGGAAGATTGATATGGAAGAGTGGAAAGAGTATGCATCAAAGAATCCTTCTCTTCTTAAGATCATGACTCTGCCATATCTAAAGTAG

>MsG0280006572.01.T01

ATGGGTAGTTATTCGAGTTTGAGTTGCGAAGAATATGTAATGGCTGGTCCGTGTGATTTAGTATCCAAGTGGAAGCTATGGTCCTACTACCATAACATTGACCAGCAAAAGTTATCTAAGAACCAACAGAAATTTCATGCTAACTTTGAGTTGCGTGGCTGCATTGATCAATATGATGGCCAAGTTTATTATGGAGTAATCAATACTGTTTCAGATGAACAATCCAAGCTGGGCACAAAGTGTACAATTCCACAAATTGCTTTCTACAAGGCCATTATTGAAGCAATAGTTCAAGGAACCACTGCAGATGGTTTTATCTCCAGCATTGATGCTCTCAATCTTAATTTGGAAAGCCAGCTTGACAGTGCCATATTTTTTGCTCTTACAGTTGCATTTAAACTGTTTGACCTTGGGAAGACTGGATACATTGAGCATAGCGAGGTGAACATGAAGGAGGTTGACTCAAAAGGAGATGGGAAGATTGATATGGAAGAGTGGAAAGAGTATGCATCAAAGAATCCTTCTCTTCTTAAGATCATGACTCTGCCATATCTAAAGTAG

>MsG0280006572.01.T03

ATGGGTAGTTATTCGAGTTTGAGTTGCGAAGAATATGTAATGGCTGGTCCGTGTGATTTAGTATCCAAGTGGAAGCTATGGTCCTACTACCATAACATTGACCAGCAAAAGTTATCTAAGAACCAACAGAAATTTCATGCTAACTTTGAGTTGCGTGGCTGCATTGATCAATATGATGGCCAAGTTTATTATGGAGTAATCAATACTGTTTCAGATGAACAATCCAAGCTGGGCACAAAGTGTACAATTCCACAAATTGCTTTCTACAAGGCCATTATTGAAGCAATAGTTCAAGGAACCACTGCAGATGGTTTTATCTCCAGCATTGATGCTCTCAATCTTAATTTGGAAAGCCAGCTTGACAGTGCCATATTTTTTGCTCTTACAGTTGCATTTAAACTGTTTGACCTTGGGAAGACTGGATACATTGAGCATAGCGAGGTGAACATGAAGGAGGTTGACTCAAAAGGAGATGGGAAGATTGATATGGAAGAGTGGAAAGAGTATGCATCAAAGAATCCTTCTCTTCTTAAGATCATGACTCTGCCATATCTAAAGTAG
Protein sequence

>MsG0280006572.01.T02

MGSYSSLSCEEYVMAGPCDLVSKWKLWSYYHNIDQQKLSKNQQKFHANFELRGCIDQYDGQVYYGVINTVSDEQSKLGTKCTIPQIAFYKAIIEAIVQGTTADGFISSIDALNLNLESQLDSAIFFALTVAFKLFDLGKTGYIEHSEVNMKEVDSKGDGKIDMEEWKEYASKNPSLLKIMTLPYLK*

>MsG0280006572.01.T01

MGSYSSLSCEEYVMAGPCDLVSKWKLWSYYHNIDQQKLSKNQQKFHANFELRGCIDQYDGQVYYGVINTVSDEQSKLGTKCTIPQIAFYKAIIEAIVQGTTADGFISSIDALNLNLESQLDSAIFFALTVAFKLFDLGKTGYIEHSEVNMKEVDSKGDGKIDMEEWKEYASKNPSLLKIMTLPYLK*

>MsG0280006572.01.T03

MGSYSSLSCEEYVMAGPCDLVSKWKLWSYYHNIDQQKLSKNQQKFHANFELRGCIDQYDGQVYYGVINTVSDEQSKLGTKCTIPQIAFYKAIIEAIVQGTTADGFISSIDALNLNLESQLDSAIFFALTVAFKLFDLGKTGYIEHSEVNMKEVDSKGDGKIDMEEWKEYASKNPSLLKIMTLPYLK*