Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012403.01.T01 | XP_013465770.1 | 90.323 | 124 | 11 | 1 | 4 | 127 | 271 | 393 | 5.79E-67 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012403.01.T01 | Q9SL95 | 68.644 | 118 | 37 | 0 | 4 | 121 | 247 | 364 | 3.76E-54 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012403.01.T01 | A0A072VDZ3 | 90.323 | 124 | 11 | 1 | 4 | 127 | 271 | 393 | 2.77e-67 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0380012403.01 | 0.815911 | 7.251552e-52 | 5.064542e-49 |
| MsG0080048874.01 | MsG0380012403.01 | 0.846091 | 2.699345e-59 | 4.594176e-56 |
| MsG0080049014.01 | MsG0380012403.01 | 0.812240 | 4.682413e-51 | 2.961450e-48 |
| MsG0080049058.01 | MsG0380012403.01 | 0.804133 | 2.500254e-49 | 1.279083e-46 |
| MsG0180000259.01 | MsG0380012403.01 | 0.803621 | 3.194151e-49 | 1.612709e-46 |
| MsG0180000470.01 | MsG0380012403.01 | 0.853600 | 2.146419e-61 | 4.663260e-58 |
| MsG0180001471.01 | MsG0380012403.01 | 0.821152 | 4.700882e-53 | 3.794145e-50 |
| MsG0180002195.01 | MsG0380012403.01 | 0.801758 | 7.741872e-49 | 3.727102e-46 |
| MsG0180002623.01 | MsG0380012403.01 | 0.802671 | 5.023397e-49 | 2.475306e-46 |
| MsG0180002842.01 | MsG0380012403.01 | 0.805416 | 1.349270e-49 | 7.134235e-47 |
| MsG0180002894.01 | MsG0380012403.01 | 0.817073 | 3.984367e-52 | 2.872772e-49 |
| MsG0180002952.01 | MsG0380012403.01 | 0.824440 | 8.064651e-54 | 7.143397e-51 |
| MsG0180003669.01 | MsG0380012403.01 | 0.833426 | 5.370717e-56 | 6.182855e-53 |
| MsG0180003673.01 | MsG0380012403.01 | 0.807919 | 3.995561e-50 | 2.253424e-47 |
| MsG0180004264.01 | MsG0380012403.01 | 0.822024 | 2.955919e-53 | 2.444862e-50 |
| MsG0180004388.01 | MsG0380012403.01 | 0.814377 | 1.588811e-51 | 1.064365e-48 |
| MsG0180004463.01 | MsG0380012403.01 | 0.807867 | 4.097453e-50 | 2.307760e-47 |
| MsG0180004789.01 | MsG0380012403.01 | 0.817363 | 3.429206e-52 | 2.492187e-49 |
| MsG0180005050.01 | MsG0380012403.01 | 0.836578 | 8.618336e-57 | 1.090605e-53 |
| MsG0180005285.01 | MsG0380012403.01 | 0.803630 | 3.180906e-49 | 1.606361e-46 |
| MsG0180006207.01 | MsG0380012403.01 | 0.803613 | 3.206388e-49 | 1.618570e-46 |
| MsG0180006257.01 | MsG0380012403.01 | 0.822876 | 1.873527e-53 | 1.587787e-50 |
| MsG0280006375.01 | MsG0380012403.01 | 0.849597 | 2.919107e-60 | 5.562251e-57 |
| MsG0280010614.01 | MsG0380012403.01 | 0.806465 | 8.119145e-50 | 4.409986e-47 |
| MsG0280010698.01 | MsG0380012403.01 | 0.817282 | 3.574923e-52 | 2.592261e-49 |
| MsG0280011285.01 | MsG0380012403.01 | 0.813753 | 2.182405e-51 | 1.437374e-48 |
| MsG0280011286.01 | MsG0380012403.01 | 0.818001 | 2.461270e-52 | 1.820327e-49 |
| MsG0380012330.01 | MsG0380012403.01 | 0.817643 | 2.964669e-52 | 2.171136e-49 |
| MsG0380012403.01 | MsG0380013363.01 | 0.814631 | 1.396244e-51 | 9.417892e-49 |
| MsG0380012403.01 | MsG0380013834.01 | 0.805348 | 1.393915e-49 | 7.357499e-47 |
| MsG0380012403.01 | MsG0380014573.01 | 0.856590 | 2.903617e-62 | 6.965815e-59 |
| MsG0380012403.01 | MsG0380014894.01 | 0.808971 | 2.382276e-50 | 1.381335e-47 |
| MsG0380012403.01 | MsG0380015566.01 | 0.800197 | 1.613352e-48 | 7.466273e-46 |
| MsG0380012403.01 | MsG0380016475.01 | 0.810636 | 1.044299e-50 | 6.328234e-48 |
| MsG0380012403.01 | MsG0380016517.01 | 0.803548 | 3.307304e-49 | 1.666797e-46 |
| MsG0380012403.01 | MsG0380016553.01 | 0.821380 | 4.164495e-53 | 3.382467e-50 |
| MsG0380012403.01 | MsG0380016910.01 | 0.827708 | 1.347358e-54 | 1.310976e-51 |
| MsG0380012403.01 | MsG0380017680.01 | 0.817117 | 3.894008e-52 | 2.810929e-49 |
| MsG0380012403.01 | MsG0380018009.01 | 0.830137 | 3.479132e-55 | 3.633797e-52 |
| MsG0380012403.01 | MsG0480018163.01 | 0.822692 | 2.068175e-53 | 1.743622e-50 |
| MsG0380012403.01 | MsG0480018576.01 | 0.845763 | 3.316071e-59 | 5.585247e-56 |
| MsG0380012403.01 | MsG0480019297.01 | 0.820732 | 5.872491e-53 | 4.684434e-50 |
| MsG0380012403.01 | MsG0480020634.01 | 0.805629 | 1.217247e-49 | 6.471601e-47 |
| MsG0380012403.01 | MsG0480021164.01 | 0.800407 | 1.462066e-48 | 6.802541e-46 |
| MsG0380012403.01 | MsG0480021274.01 | 0.814128 | 1.803685e-51 | 1.200117e-48 |
| MsG0380012403.01 | MsG0480021276.01 | 0.815016 | 1.147191e-51 | 7.818656e-49 |
| MsG0380012403.01 | MsG0480021536.01 | 0.803189 | 3.924716e-49 | 1.959738e-46 |
| MsG0380012403.01 | MsG0480021688.01 | 0.801591 | 8.375210e-49 | 4.015050e-46 |
| MsG0380012403.01 | MsG0480022213.01 | -0.806224 | 9.126101e-50 | 4.926700e-47 |
| MsG0380012403.01 | MsG0480022259.01 | 0.821171 | 4.653049e-53 | 3.757554e-50 |
| MsG0380012403.01 | MsG0480022262.01 | 0.827732 | 1.329757e-54 | 1.294715e-51 |
| MsG0380012403.01 | MsG0480022551.01 | 0.812607 | 3.894643e-51 | 2.487269e-48 |
| MsG0380012403.01 | MsG0480023410.01 | 0.802801 | 4.721493e-49 | 2.334404e-46 |
| MsG0380012403.01 | MsG0480023654.01 | 0.830450 | 2.916761e-55 | 3.073864e-52 |
| MsG0380012403.01 | MsG0480023707.01 | 0.811930 | 5.471718e-51 | 3.431294e-48 |
| MsG0380012403.01 | MsG0480023835.01 | 0.806165 | 9.391417e-50 | 5.062253e-47 |
| MsG0380012403.01 | MsG0580025022.01 | 0.848245 | 6.931459e-60 | 1.264028e-56 |
| MsG0380012403.01 | MsG0580025758.01 | 0.819407 | 1.180215e-52 | 9.074140e-50 |
| MsG0380012403.01 | MsG0580026726.01 | 0.810557 | 1.086156e-50 | 6.567980e-48 |
| MsG0380012403.01 | MsG0580027031.01 | 0.802669 | 5.026464e-49 | 2.476726e-46 |
| MsG0380012403.01 | MsG0580027152.01 | 0.800699 | 1.274914e-48 | 5.975587e-46 |
| MsG0380012403.01 | MsG0580027208.01 | 0.820068 | 8.336551e-53 | 6.529636e-50 |
| MsG0380012403.01 | MsG0580027745.01 | 0.812569 | 3.968467e-51 | 2.531990e-48 |
| MsG0380012403.01 | MsG0580027833.01 | 0.821537 | 3.830014e-53 | 3.124553e-50 |
| MsG0380012403.01 | MsG0580029008.01 | 0.802442 | 5.600610e-49 | 2.743712e-46 |
| MsG0380012403.01 | MsG0580029554.01 | 0.800694 | 1.278203e-48 | 5.990283e-46 |
| MsG0380012403.01 | MsG0680030672.01 | 0.806300 | 8.794033e-50 | 4.756382e-47 |
| MsG0380012403.01 | MsG0680031262.01 | 0.821664 | 3.579694e-53 | 2.930852e-50 |
| MsG0380012403.01 | MsG0680032495.01 | 0.801336 | 9.446221e-49 | 4.499634e-46 |
| MsG0380012403.01 | MsG0680032933.01 | 0.810205 | 1.293847e-50 | 7.751271e-48 |
| MsG0380012403.01 | MsG0680033412.01 | 0.817619 | 3.001828e-52 | 2.196907e-49 |
| MsG0380012403.01 | MsG0680035573.01 | 0.842240 | 2.918544e-58 | 4.397439e-55 |
| MsG0380012403.01 | MsG0680035692.01 | 0.829194 | 5.899565e-55 | 5.995549e-52 |
| MsG0380012403.01 | MsG0680035909.01 | 0.800779 | 1.227793e-48 | 5.766457e-46 |
| MsG0380012403.01 | MsG0780036018.01 | 0.809611 | 1.737138e-50 | 1.024708e-47 |
| MsG0380012403.01 | MsG0780036080.01 | 0.803228 | 3.852590e-49 | 1.925569e-46 |
| MsG0380012403.01 | MsG0780037919.01 | 0.823183 | 1.588828e-53 | 1.358207e-50 |
| MsG0380012403.01 | MsG0780038386.01 | 0.819154 | 1.347779e-52 | 1.028956e-49 |
| MsG0380012403.01 | MsG0780038391.01 | 0.827176 | 1.808052e-54 | 1.732219e-51 |
| MsG0380012403.01 | MsG0780038401.01 | 0.844163 | 8.962078e-59 | 1.434419e-55 |
| MsG0380012403.01 | MsG0780038495.01 | 0.815728 | 7.969245e-52 | 5.538569e-49 |
| MsG0380012403.01 | MsG0780038602.01 | 0.830834 | 2.348594e-55 | 2.503510e-52 |
| MsG0380012403.01 | MsG0780039059.01 | 0.802291 | 6.015852e-49 | 2.935922e-46 |
| MsG0380012403.01 | MsG0780039252.01 | 0.831887 | 1.293479e-55 | 1.422696e-52 |
| MsG0380012403.01 | MsG0780039655.01 | 0.805905 | 1.064962e-49 | 5.702338e-47 |
| MsG0380012403.01 | MsG0780039866.01 | 0.800231 | 1.587821e-48 | 7.354648e-46 |
| MsG0380012403.01 | MsG0780040057.01 | 0.824319 | 8.606747e-54 | 7.597168e-51 |
| MsG0380012403.01 | MsG0780040488.01 | 0.804392 | 2.208648e-49 | 1.137412e-46 |
| MsG0380012403.01 | MsG0780040604.01 | 0.827273 | 1.713871e-54 | 1.646704e-51 |
| MsG0380012403.01 | MsG0780041456.01 | 0.817777 | 2.765636e-52 | 2.032944e-49 |
| MsG0380012403.01 | MsG0880041836.01 | 0.811503 | 6.776842e-51 | 4.202293e-48 |
| MsG0380012403.01 | MsG0880044574.01 | 0.828537 | 8.507249e-55 | 8.480498e-52 |
| MsG0380012403.01 | MsG0880045372.01 | 0.835050 | 2.102474e-56 | 2.541140e-53 |
| MsG0380012403.01 | MsG0880045736.01 | 0.811045 | 8.517530e-51 | 5.218268e-48 |
| MsG0380012403.01 | MsG0880045895.01 | 0.891654 | 3.261229e-74 | 2.885387e-70 |
| MsG0380012403.01 | MsG0880045896.01 | 0.810774 | 9.753247e-51 | 5.932210e-48 |
| MsG0380012403.01 | MsG0880045937.01 | 0.807867 | 4.097400e-50 | 2.307733e-47 |
| MsG0380012403.01 | MsG0880046012.01 | 0.807822 | 4.188471e-50 | 2.356329e-47 |
| MsG0380012403.01 | MsG0880046020.01 | 0.833974 | 3.917906e-56 | 4.585735e-53 |
| MsG0380012403.01 | MsG0880046425.01 | 0.815853 | 7.472844e-52 | 5.210780e-49 |
| MsG0380012403.01 | MsG0880046479.01 | 0.805499 | 1.296350e-49 | 6.868980e-47 |
| MsG0380012403.01 | MsG0880047712.01 | 0.800722 | 1.261608e-48 | 5.916668e-46 |
| MsG0280006572.01 | MsG0380012403.01 | 0.804894 | 1.735000e-49 | 9.052633e-47 |
| MsG0280006976.01 | MsG0380012403.01 | 0.826002 | 3.444821e-54 | 3.190848e-51 |
| MsG0280008270.01 | MsG0380012403.01 | 0.818920 | 1.523884e-52 | 1.156084e-49 |
| MsG0280008615.01 | MsG0380012403.01 | 0.826904 | 2.099765e-54 | 1.995867e-51 |
| MsG0280009297.01 | MsG0380012403.01 | 0.808207 | 3.468757e-50 | 1.971439e-47 |
| MsG0280009514.01 | MsG0380012403.01 | 0.813747 | 2.188813e-51 | 1.441365e-48 |
| MsG0280009748.01 | MsG0380012403.01 | 0.821836 | 3.266026e-53 | 2.687252e-50 |
| MsG0280009986.01 | MsG0380012403.01 | 0.806725 | 7.155099e-50 | 3.912227e-47 |
| MsG0280010443.01 | MsG0380012403.01 | 0.840677 | 7.528852e-58 | 1.080389e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012403.01.T01 | MTR_1g010210 | 90.323 | 124 | 11 | 1 | 4 | 127 | 271 | 393 | 7.01e-71 | 219 |
| MsG0380012403.01.T01 | MTR_1g010270 | 79.839 | 124 | 24 | 1 | 4 | 127 | 255 | 377 | 1.21e-62 | 197 |
| MsG0380012403.01.T01 | MTR_3g108190 | 74.359 | 117 | 30 | 0 | 4 | 120 | 251 | 367 | 1.78e-57 | 184 |
| MsG0380012403.01.T01 | MTR_3g464210 | 80.180 | 111 | 21 | 1 | 1 | 110 | 271 | 381 | 3.73e-57 | 184 |
| MsG0380012403.01.T01 | MTR_4g011600 | 57.025 | 121 | 51 | 1 | 2 | 121 | 255 | 375 | 8.72e-43 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012403.01.T01 | AT2G25680 | 68.644 | 118 | 37 | 0 | 4 | 121 | 247 | 364 | 3.83e-55 | 178 |
| MsG0380012403.01.T01 | AT1G80310 | 55.372 | 121 | 52 | 2 | 2 | 121 | 242 | 361 | 2.30e-42 | 145 |
Find 28 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAAACAAAATTGGATAAA+AGG | 0.182185 | 3:+16032525 | MsG0380012403.01.T01:CDS |
| GTAAATGAAAATTCCCTTTC+AGG | 0.189818 | 3:-16032633 | None:intergenic |
| TGAAATTCACTAAACAAAAT+TGG | 0.301984 | 3:+16032517 | MsG0380012403.01.T01:CDS |
| GGAGGGTGTGTGGCACTTCT+TGG | 0.303917 | 3:+16032771 | MsG0380012403.01.T01:CDS |
| TAATGAATTTAGTTGGTTCT+TGG | 0.325172 | 3:+16032679 | MsG0380012403.01.T01:CDS |
| CTAGCAGGACAATATAAATT+TGG | 0.328674 | 3:+16032738 | MsG0380012403.01.T01:CDS |
| GCAGGGTTTAGGAACATCTT+AGG | 0.336845 | 3:+16032818 | MsG0380012403.01.T01:CDS |
| AAAACTGGTATTGGGATTGC+AGG | 0.365091 | 3:+16032800 | MsG0380012403.01.T01:CDS |
| GTATTGGGATTGCAGGGTTT+AGG | 0.376340 | 3:+16032807 | MsG0380012403.01.T01:CDS |
| AATTTAGTTGGTTCTTGGTT+TGG | 0.385997 | 3:+16032684 | MsG0380012403.01.T01:CDS |
| TTCATTACTTCTATTGAAGA+TGG | 0.415265 | 3:-16032498 | None:intergenic |
| GTTGTAAACAAAATTAAAGT+TGG | 0.432914 | 3:+16032474 | MsG0380012403.01.T01:CDS |
| TAAATGAAAATTCCCTTTCA+GGG | 0.439153 | 3:-16032632 | None:intergenic |
| GTTGGACTAATGAATTTAGT+TGG | 0.454255 | 3:+16032672 | MsG0380012403.01.T01:CDS |
| AACATTGACAATGGAAGTTG+TGG | 0.498635 | 3:-16032567 | None:intergenic |
| GGTGCTGTGCCAACTTGTCA+TGG | 0.504890 | 3:+16032705 | MsG0380012403.01.T01:CDS |
| TATAAATTTGGTGAAAGAAG+TGG | 0.504991 | 3:+16032750 | MsG0380012403.01.T01:CDS |
| CATGGTGTTGGTGGACTAGC+AGG | 0.518289 | 3:+16032723 | MsG0380012403.01.T01:CDS |
| CCAACTTGTCATGGTGTTGG+TGG | 0.525816 | 3:+16032714 | MsG0380012403.01.T01:CDS |
| ACATCAATTTCAGTGACAGT+TGG | 0.531284 | 3:+16032654 | MsG0380012403.01.T01:CDS |
| GTGCCAACTTGTCATGGTGT+TGG | 0.538904 | 3:+16032711 | MsG0380012403.01.T01:CDS |
| TGAGAAATGTATATAAGAAG+TGG | 0.542304 | 3:+16032450 | None:intergenic |
| CCACCAACACCATGACAAGT+TGG | 0.570149 | 3:-16032714 | None:intergenic |
| AAACTGGTATTGGGATTGCA+GGG | 0.575773 | 3:+16032801 | MsG0380012403.01.T01:CDS |
| AAATTTGGTGAAAGAAGTGG+AGG | 0.620983 | 3:+16032753 | MsG0380012403.01.T01:CDS |
| ACTGAGTTCAACATTGACAA+TGG | 0.640308 | 3:-16032576 | None:intergenic |
| TGAAAGAAGTGGAGGGTGTG+TGG | 0.671256 | 3:+16032761 | MsG0380012403.01.T01:CDS |
| AATTTGGTGAAAGAAGTGGA+GGG | 0.715450 | 3:+16032754 | MsG0380012403.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAACAAAATTGGATAAA+AGG | + | Chr3:16032525-16032544 | MsG0380012403.01.T01:CDS | 20.0% |
| !! | GTTGTAAACAAAATTAAAGT+TGG | + | Chr3:16032474-16032493 | MsG0380012403.01.T01:CDS | 20.0% |
| !! | TGAAATTCACTAAACAAAAT+TGG | + | Chr3:16032517-16032536 | MsG0380012403.01.T01:CDS | 20.0% |
| !!! | TGGATAAAAGGTTTTATTAA+AGG | + | Chr3:16032537-16032556 | MsG0380012403.01.T01:CDS | 20.0% |
| ! | TAAATGAAAATTCCCTTTCA+GGG | - | Chr3:16032635-16032654 | None:intergenic | 25.0% |
| ! | TTCATTACTTCTATTGAAGA+TGG | - | Chr3:16032501-16032520 | None:intergenic | 25.0% |
| !! | TAATGAATTTAGTTGGTTCT+TGG | + | Chr3:16032679-16032698 | MsG0380012403.01.T01:CDS | 25.0% |
| !! | TATAAATTTGGTGAAAGAAG+TGG | + | Chr3:16032750-16032769 | MsG0380012403.01.T01:CDS | 25.0% |
| CTAGCAGGACAATATAAATT+TGG | + | Chr3:16032738-16032757 | MsG0380012403.01.T01:CDS | 30.0% | |
| GTAAATGAAAATTCCCTTTC+AGG | - | Chr3:16032636-16032655 | None:intergenic | 30.0% | |
| GTTGGACTAATGAATTTAGT+TGG | + | Chr3:16032672-16032691 | MsG0380012403.01.T01:CDS | 30.0% | |
| ! | AATTTAGTTGGTTCTTGGTT+TGG | + | Chr3:16032684-16032703 | MsG0380012403.01.T01:CDS | 30.0% |
| AACATTGACAATGGAAGTTG+TGG | - | Chr3:16032570-16032589 | None:intergenic | 35.0% | |
| ACATCAATTTCAGTGACAGT+TGG | + | Chr3:16032654-16032673 | MsG0380012403.01.T01:CDS | 35.0% | |
| ACTGAGTTCAACATTGACAA+TGG | - | Chr3:16032579-16032598 | None:intergenic | 35.0% | |
| ! | AAATTTGGTGAAAGAAGTGG+AGG | + | Chr3:16032753-16032772 | MsG0380012403.01.T01:CDS | 35.0% |
| ! | AACAGATCTTTTCCCTGAAA+GGG | + | Chr3:16032620-16032639 | MsG0380012403.01.T01:CDS | 35.0% |
| ! | AATTTGGTGAAAGAAGTGGA+GGG | + | Chr3:16032754-16032773 | MsG0380012403.01.T01:CDS | 35.0% |
| ! | GGTTTTGCAAAACTGGTATT+GGG | + | Chr3:16032792-16032811 | MsG0380012403.01.T01:CDS | 35.0% |
| !! | TGGTTTTGCAAAACTGGTAT+TGG | + | Chr3:16032791-16032810 | MsG0380012403.01.T01:CDS | 35.0% |
| !!! | ACTTCTTGGTTTTGCAAAAC+TGG | + | Chr3:16032785-16032804 | MsG0380012403.01.T01:CDS | 35.0% |
| ! | AAAACTGGTATTGGGATTGC+AGG | + | Chr3:16032800-16032819 | MsG0380012403.01.T01:CDS | 40.0% |
| ! | AAACTGGTATTGGGATTGCA+GGG | + | Chr3:16032801-16032820 | MsG0380012403.01.T01:CDS | 40.0% |
| ! | CAACAGATCTTTTCCCTGAA+AGG | + | Chr3:16032619-16032638 | MsG0380012403.01.T01:CDS | 40.0% |
| GTATTGGGATTGCAGGGTTT+AGG | + | Chr3:16032807-16032826 | MsG0380012403.01.T01:CDS | 45.0% | |
| CCACCAACACCATGACAAGT+TGG | - | Chr3:16032717-16032736 | None:intergenic | 50.0% | |
| GTGCCAACTTGTCATGGTGT+TGG | + | Chr3:16032711-16032730 | MsG0380012403.01.T01:CDS | 50.0% | |
| ! | CCAACTTGTCATGGTGTTGG+TGG | + | Chr3:16032714-16032733 | MsG0380012403.01.T01:CDS | 50.0% |
| ! | TGAAAGAAGTGGAGGGTGTG+TGG | + | Chr3:16032761-16032780 | MsG0380012403.01.T01:CDS | 50.0% |
| ! | GGTGCTGTGCCAACTTGTCA+TGG | + | Chr3:16032705-16032724 | MsG0380012403.01.T01:CDS | 55.0% |
| !! | CATGGTGTTGGTGGACTAGC+AGG | + | Chr3:16032723-16032742 | MsG0380012403.01.T01:CDS | 55.0% |
| ! | GGAGGGTGTGTGGCACTTCT+TGG | + | Chr3:16032771-16032790 | MsG0380012403.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 16032456 | 16032839 | 16032456 | ID=MsG0380012403.01;Name=MsG0380012403.01 |
| Chr3 | mRNA | 16032456 | 16032839 | 16032456 | ID=MsG0380012403.01.T01;Parent=MsG0380012403.01;Name=MsG0380012403.01.T01;_AED=0.51;_eAED=0.51;_QI=0|-1|0|1|-1|1|1|0|127 |
| Chr3 | exon | 16032456 | 16032839 | 16032456 | ID=MsG0380012403.01.T01:exon:21711;Parent=MsG0380012403.01.T01 |
| Chr3 | CDS | 16032456 | 16032839 | 16032456 | ID=MsG0380012403.01.T01:cds;Parent=MsG0380012403.01.T01 |
| Gene Sequence |
| Protein sequence |
