Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006748.01.T01 | KEH36559.1 | 96.19 | 105 | 4 | 0 | 1 | 105 | 1 | 105 | 3.79E-66 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006748.01.T01 | O22611 | 86.139 | 101 | 13 | 1 | 1 | 101 | 1 | 100 | 1.75E-46 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006748.01.T01 | A0A072V3F7 | 96.190 | 105 | 4 | 0 | 1 | 105 | 1 | 105 | 1.81e-66 | 205 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005226.01 | MsG0280006748.01 | -0.814842 | 1.253726e-51 | 8.504445e-49 |
| MsG0280006748.01 | MsG0280007142.01 | -0.808618 | 2.834876e-50 | 1.628448e-47 |
| MsG0280006748.01 | MsG0280011113.01 | -0.813019 | 3.164170e-51 | 2.042885e-48 |
| MsG0280006748.01 | MsG0380014767.01 | 0.850773 | 1.366822e-60 | 2.706893e-57 |
| MsG0280006748.01 | MsG0380015733.01 | -0.853869 | 1.796447e-61 | 3.937929e-58 |
| MsG0280006748.01 | MsG0380016349.01 | -0.836852 | 7.337449e-57 | 9.362430e-54 |
| MsG0280006748.01 | MsG0580029673.01 | -0.837418 | 5.258915e-57 | 6.826958e-54 |
| MsG0280006748.01 | MsG0780036754.01 | -0.812228 | 4.712653e-51 | 2.979561e-48 |
| MsG0280006748.01 | MsG0880043624.01 | -0.817993 | 2.471699e-52 | 1.827636e-49 |
| MsG0280006748.01 | MsG0880046135.01 | 0.813952 | 1.972712e-51 | 1.306295e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006748.01.T01 | MTR_2g014240 | 96.190 | 105 | 4 | 0 | 1 | 105 | 1 | 105 | 4.58e-70 | 205 |
| MsG0280006748.01.T01 | MTR_2g014240 | 96.040 | 101 | 4 | 0 | 1 | 101 | 1 | 101 | 5.31e-67 | 197 |
| MsG0280006748.01.T01 | MTR_2g014240 | 94.059 | 101 | 4 | 1 | 1 | 101 | 1 | 99 | 2.17e-53 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006748.01.T01 | AT1G28330 | 55.462 | 119 | 43 | 4 | 1 | 110 | 3 | 120 | 5.33e-30 | 104 |
| MsG0280006748.01.T01 | AT1G28330 | 58.182 | 110 | 36 | 5 | 1 | 101 | 3 | 111 | 6.95e-30 | 103 |
| MsG0280006748.01.T01 | AT1G28330 | 58.182 | 110 | 36 | 5 | 1 | 101 | 3 | 111 | 6.95e-30 | 103 |
| MsG0280006748.01.T01 | AT1G28330 | 55.462 | 119 | 43 | 4 | 1 | 110 | 3 | 120 | 8.60e-30 | 103 |
| MsG0280006748.01.T01 | AT2G33830 | 54.128 | 109 | 37 | 6 | 5 | 109 | 1 | 100 | 1.96e-29 | 102 |
| MsG0280006748.01.T01 | AT2G33830 | 50.943 | 106 | 47 | 3 | 5 | 109 | 1 | 102 | 2.58e-29 | 102 |
| MsG0280006748.01.T01 | AT1G28330 | 57.798 | 109 | 36 | 4 | 1 | 100 | 3 | 110 | 1.13e-28 | 101 |
| MsG0280006748.01.T01 | AT1G28330 | 57.798 | 109 | 36 | 4 | 1 | 100 | 3 | 110 | 1.13e-28 | 101 |
| MsG0280006748.01.T01 | AT5G44300 | 53.398 | 103 | 44 | 4 | 1 | 101 | 3 | 103 | 3.13e-28 | 99.8 |
Find 63 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAGTTTGTCTAACATTT+TGG | 0.088107 | 2:+5787036 | None:intergenic |
| GATGTGCCACCAAAACTTTC+TGG | 0.166653 | 2:-5786213 | MsG0280006748.01.T01:three_prime_UTR |
| TCCAAGTGTAACGAGATATT+TGG | 0.192173 | 2:+5787209 | None:intergenic |
| TACAATATTTAGAAGAAAAT+AGG | 0.251306 | 2:+5785933 | None:intergenic |
| AAAATATCTACGGCTAAAAT+TGG | 0.265060 | 2:+5787168 | None:intergenic |
| TTAGCTAGATAAACCTATTA+AGG | 0.299960 | 2:+5786020 | None:intergenic |
| CCAAAATGTTAGACAAACTT+TGG | 0.309017 | 2:-5787036 | MsG0280006748.01.T01:exon |
| TGGAGGAGCGTGTTCAATCC+TGG | 0.327841 | 2:-5786685 | MsG0280006748.01.T01:CDS |
| TTATCTAGCTTTGCCTTAAT+AGG | 0.332499 | 2:-5786033 | MsG0280006748.01.T01:three_prime_UTR |
| CACGTAAAGTTGACAACGTT+TGG | 0.347744 | 2:-5786705 | MsG0280006748.01.T01:CDS |
| CTTCTAAATATTGTAACAAA+TGG | 0.375074 | 2:-5785925 | MsG0280006748.01.T01:three_prime_UTR |
| GCAATCAACCCAGAAAGTTT+TGG | 0.376912 | 2:+5786204 | None:intergenic |
| TCAAGGCCACGCTCAGGTTG+AGG | 0.384188 | 2:+5786995 | None:intergenic |
| CAAAATGTTAGACAAACTTT+GGG | 0.385846 | 2:-5787035 | MsG0280006748.01.T01:exon |
| CTTTGGGATGATACCGTTGC+TGG | 0.399829 | 2:-5787019 | MsG0280006748.01.T01:CDS |
| CCAAGTGTAACGAGATATTT+GGG | 0.415710 | 2:+5787210 | None:intergenic |
| ATAATTGATAGTATAGTATG+AGG | 0.431721 | 2:+5787097 | None:intergenic |
| AACTCTGCTACTAAGACAAT+TGG | 0.434795 | 2:-5786658 | MsG0280006748.01.T01:CDS |
| GTTTATACCTTTGATGATGC+TGG | 0.439938 | 2:+5786952 | None:intergenic |
| CCCAAATATCTCGTTACACT+TGG | 0.457056 | 2:-5787210 | MsG0280006748.01.T01:five_prime_UTR |
| CAAGGCCACGCTCAGGTTGA+GGG | 0.457180 | 2:+5786996 | None:intergenic |
| ATGTGCCACCAAAACTTTCT+GGG | 0.468880 | 2:-5786212 | MsG0280006748.01.T01:three_prime_UTR |
| TGTATAGTTCTTCTAACAAA+AGG | 0.474590 | 2:+5786402 | None:intergenic |
| TGAGGTGTCGTTGGAGTCGC+CGG | 0.474823 | 2:+5786733 | None:intergenic |
| GATGGAATTGCACAGTTACA+TGG | 0.475449 | 2:+5785877 | None:intergenic |
| GGAGGAGCGTGTTCAATCCT+GGG | 0.490368 | 2:-5786684 | MsG0280006748.01.T01:CDS |
| TGGCAGACGATCAACAAAAC+AGG | 0.493537 | 2:+5786168 | None:intergenic |
| TCAACTTTACGTGCCGATTG+AGG | 0.495412 | 2:+5786715 | None:intergenic |
| GACTCCAACGACACCTCAAT+CGG | 0.495837 | 2:-5786728 | MsG0280006748.01.T01:CDS |
| GTTGGAGTCGCCGGTGTTGT+CGG | 0.498433 | 2:+5786742 | None:intergenic |
| GCCGGTGTTGTCGGTGTCGA+AGG | 0.500942 | 2:+5786751 | None:intergenic |
| AGCTTCTCAAGGCCACGCTC+AGG | 0.504351 | 2:+5786989 | None:intergenic |
| TTAGTAGCAGAGTTGCTCCC+AGG | 0.506672 | 2:+5786667 | None:intergenic |
| ATGCAAATTATAAGAGTGGT+TGG | 0.510658 | 2:+5786560 | None:intergenic |
| GTGATCGCAGGATGTACAGC+GGG | 0.519197 | 2:-5786258 | MsG0280006748.01.T01:three_prime_UTR |
| TTACGTGTCGTGATCTGATC+GGG | 0.520466 | 2:-5786129 | MsG0280006748.01.T01:three_prime_UTR |
| AGCGTGGCCTTGAGAAGCTT+AGG | 0.531934 | 2:-5786985 | MsG0280006748.01.T01:CDS |
| GGATGTACAGCGGGGACACA+AGG | 0.536816 | 2:-5786249 | MsG0280006748.01.T01:three_prime_UTR |
| CGTGCCGATTGAGGTGTCGT+TGG | 0.538925 | 2:+5786724 | None:intergenic |
| AGTGATGCTTAAAATATCTA+CGG | 0.543333 | 2:+5787158 | None:intergenic |
| GTTACGTGTCGTGATCTGAT+CGG | 0.558661 | 2:-5786130 | MsG0280006748.01.T01:three_prime_UTR |
| ATGCATGCAAATTATAAGAG+TGG | 0.570650 | 2:+5786556 | None:intergenic |
| TAATTGATAGTATAGTATGA+GGG | 0.580196 | 2:+5787098 | None:intergenic |
| CTCAGGTTGAGGGCCAGCAA+CGG | 0.587677 | 2:+5787006 | None:intergenic |
| GTAAAGTTGACAACGTTTGG+AGG | 0.589302 | 2:-5786702 | MsG0280006748.01.T01:CDS |
| GCTGGCCCTCAACCTGAGCG+TGG | 0.589408 | 2:-5787001 | MsG0280006748.01.T01:CDS |
| ACATACCAATCATAGACAGT+GGG | 0.591016 | 2:+5786601 | None:intergenic |
| TTAGCTTCCTAAGCTTCTCA+AGG | 0.592667 | 2:+5786978 | None:intergenic |
| GCCTTCGACACCGACAACAC+CGG | 0.593074 | 2:-5786752 | MsG0280006748.01.T01:CDS |
| TATACCTTTGATGATGCTGG+TGG | 0.618859 | 2:+5786955 | None:intergenic |
| CTAACCACCAGCATCATCAA+AGG | 0.620330 | 2:-5786959 | MsG0280006748.01.T01:intron |
| ACAAAACTCAAATTAATACA+AGG | 0.623205 | 2:+5786055 | None:intergenic |
| GATCAGATCACGACACGTAA+CGG | 0.626020 | 2:+5786132 | None:intergenic |
| GATTAATTAACACTTACAGA+AGG | 0.629797 | 2:+5785984 | None:intergenic |
| TGTAACGAGATATTTGGGAG+TGG | 0.642896 | 2:+5787215 | None:intergenic |
| ATTGGGTTGTATGTGATCGC+AGG | 0.652577 | 2:-5786270 | MsG0280006748.01.T01:three_prime_UTR |
| AACATACCAATCATAGACAG+TGG | 0.664521 | 2:+5786600 | None:intergenic |
| TGTTAGAAGAACTATACATG+TGG | 0.680047 | 2:-5786397 | MsG0280006748.01.T01:three_prime_UTR |
| CATACCAATCATAGACAGTG+GGG | 0.727901 | 2:+5786602 | None:intergenic |
| TGTGATCGCAGGATGTACAG+CGG | 0.734662 | 2:-5786259 | MsG0280006748.01.T01:three_prime_UTR |
| ATACCAATCATAGACAGTGG+GGG | 0.749000 | 2:+5786603 | None:intergenic |
| TGATCGCAGGATGTACAGCG+GGG | 0.761714 | 2:-5786257 | MsG0280006748.01.T01:three_prime_UTR |
| GTAACGGTGATACAGACACG+TGG | 0.790753 | 2:+5786148 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTCATTATATTATAGT+TGG | + | Chr2:5786204-5786223 | None:intergenic | 10.0% |
| !! | ACAAACATATAAAAATGAAT+TGG | - | Chr2:5786813-5786832 | MsG0280006748.01.T01:intron | 15.0% |
| !! | CAAACATATAAAAATGAATT+GGG | - | Chr2:5786814-5786833 | MsG0280006748.01.T01:intron | 15.0% |
| !! | TACAATATTTAGAAGAAAAT+AGG | + | Chr2:5787171-5787190 | None:intergenic | 15.0% |
| !!! | GTTGATTTTAATTTGATTTT+GGG | - | Chr2:5786281-5786300 | MsG0280006748.01.T01:three_prime_UTR | 15.0% |
| !!! | TGTTGATTTTAATTTGATTT+TGG | - | Chr2:5786280-5786299 | MsG0280006748.01.T01:three_prime_UTR | 15.0% |
| !!! | TTGATTCTATATTTTATTTG+TGG | - | Chr2:5786634-5786653 | MsG0280006748.01.T01:CDS | 15.0% |
| !! | ACAAAACTCAAATTAATACA+AGG | + | Chr2:5787049-5787068 | None:intergenic | 20.0% |
| !! | CTTCTAAATATTGTAACAAA+TGG | - | Chr2:5787176-5787195 | MsG0280006748.01.T01:five_prime_UTR | 20.0% |
| !!! | ATAATTGATAGTATAGTATG+AGG | + | Chr2:5786007-5786026 | None:intergenic | 20.0% |
| !!! | TAATTGATAGTATAGTATGA+GGG | + | Chr2:5786006-5786025 | None:intergenic | 20.0% |
| ! | AAAATATCTACGGCTAAAAT+TGG | + | Chr2:5785936-5785955 | None:intergenic | 25.0% |
| ! | AGTGATGCTTAAAATATCTA+CGG | + | Chr2:5785946-5785965 | None:intergenic | 25.0% |
| ! | CAAAATGTTAGACAAACTTT+GGG | - | Chr2:5786066-5786085 | MsG0280006748.01.T01:three_prime_UTR | 25.0% |
| ! | GATTAATTAACACTTACAGA+AGG | + | Chr2:5787120-5787139 | None:intergenic | 25.0% |
| ! | TGTATAGTTCTTCTAACAAA+AGG | + | Chr2:5786702-5786721 | None:intergenic | 25.0% |
| ! | TTAGCTAGATAAACCTATTA+AGG | + | Chr2:5787084-5787103 | None:intergenic | 25.0% |
| ATGCAAATTATAAGAGTGGT+TGG | + | Chr2:5786544-5786563 | None:intergenic | 30.0% | |
| ATGCATGCAAATTATAAGAG+TGG | + | Chr2:5786548-5786567 | None:intergenic | 30.0% | |
| CCAAAATGTTAGACAAACTT+TGG | - | Chr2:5786065-5786084 | MsG0280006748.01.T01:three_prime_UTR | 30.0% | |
| TGTTAGAAGAACTATACATG+TGG | - | Chr2:5786704-5786723 | MsG0280006748.01.T01:CDS | 30.0% | |
| ! | CCAAAGTTTGTCTAACATTT+TGG | + | Chr2:5786068-5786087 | None:intergenic | 30.0% |
| !! | TTATCTAGCTTTGCCTTAAT+AGG | - | Chr2:5787068-5787087 | MsG0280006748.01.T01:five_prime_UTR | 30.0% |
| !!! | CTAACATTTTGGAACTAAGA+TGG | + | Chr2:5786057-5786076 | None:intergenic | 30.0% |
| AACATACCAATCATAGACAG+TGG | + | Chr2:5786504-5786523 | None:intergenic | 35.0% | |
| AACTCTGCTACTAAGACAAT+TGG | - | Chr2:5786443-5786462 | MsG0280006748.01.T01:three_prime_UTR | 35.0% | |
| ACATACCAATCATAGACAGT+GGG | + | Chr2:5786503-5786522 | None:intergenic | 35.0% | |
| CCAAGTGTAACGAGATATTT+GGG | + | Chr2:5785894-5785913 | None:intergenic | 35.0% | |
| TCCAAGTGTAACGAGATATT+TGG | + | Chr2:5785895-5785914 | None:intergenic | 35.0% | |
| !! | GTTTATACCTTTGATGATGC+TGG | + | Chr2:5786152-5786171 | None:intergenic | 35.0% |
| !! | TTGATTTTGGGTGTAGATGA+AGG | - | Chr2:5786293-5786312 | MsG0280006748.01.T01:three_prime_UTR | 35.0% |
| ATACCAATCATAGACAGTGG+GGG | + | Chr2:5786501-5786520 | None:intergenic | 40.0% | |
| ATGTGCCACCAAAACTTTCT+GGG | - | Chr2:5786889-5786908 | MsG0280006748.01.T01:intron | 40.0% | |
| CACGTAAAGTTGACAACGTT+TGG | - | Chr2:5786396-5786415 | MsG0280006748.01.T01:three_prime_UTR | 40.0% | |
| CATACCAATCATAGACAGTG+GGG | + | Chr2:5786502-5786521 | None:intergenic | 40.0% | |
| CCCAAATATCTCGTTACACT+TGG | - | Chr2:5785891-5785910 | MsG0280006748.01.T01:three_prime_UTR | 40.0% | |
| GTAAAGTTGACAACGTTTGG+AGG | - | Chr2:5786399-5786418 | MsG0280006748.01.T01:three_prime_UTR | 40.0% | |
| TTAGCTTCCTAAGCTTCTCA+AGG | + | Chr2:5786126-5786145 | None:intergenic | 40.0% | |
| ! | GCAATCAACCCAGAAAGTTT+TGG | + | Chr2:5786900-5786919 | None:intergenic | 40.0% |
| !! | ATCAACCCAGAAAGTTTTGG+TGG | + | Chr2:5786897-5786916 | None:intergenic | 40.0% |
| !! | ATTTTGGGTGTAGATGAAGG+AGG | - | Chr2:5786296-5786315 | MsG0280006748.01.T01:three_prime_UTR | 40.0% |
| !! | TATACCTTTGATGATGCTGG+TGG | + | Chr2:5786149-5786168 | None:intergenic | 40.0% |
| CTAACCACCAGCATCATCAA+AGG | - | Chr2:5786142-5786161 | MsG0280006748.01.T01:three_prime_UTR | 45.0% | |
| GATCAGATCACGACACGTAA+CGG | + | Chr2:5786972-5786991 | None:intergenic | 45.0% | |
| GATGTGCCACCAAAACTTTC+TGG | - | Chr2:5786888-5786907 | MsG0280006748.01.T01:intron | 45.0% | |
| GTTACGTGTCGTGATCTGAT+CGG | - | Chr2:5786971-5786990 | MsG0280006748.01.T01:CDS | 45.0% | |
| TGGCAGACGATCAACAAAAC+AGG | + | Chr2:5786936-5786955 | None:intergenic | 45.0% | |
| TTACGTGTCGTGATCTGATC+GGG | - | Chr2:5786972-5786991 | MsG0280006748.01.T01:CDS | 45.0% | |
| ! | ATTGGGTTGTATGTGATCGC+AGG | - | Chr2:5786831-5786850 | MsG0280006748.01.T01:intron | 45.0% |
| !! | AAGTTTTGGTGGCACATCAG+CGG | + | Chr2:5786886-5786905 | None:intergenic | 45.0% |
| !! | TCAACTTTACGTGCCGATTG+AGG | + | Chr2:5786389-5786408 | None:intergenic | 45.0% |
| ACACCCCCACTGTCTATGAT+TGG | - | Chr2:5786495-5786514 | MsG0280006748.01.T01:three_prime_UTR | 50.0% | |
| GACTCCAACGACACCTCAAT+CGG | - | Chr2:5786373-5786392 | MsG0280006748.01.T01:three_prime_UTR | 50.0% | |
| GTAACGGTGATACAGACACG+TGG | + | Chr2:5786956-5786975 | None:intergenic | 50.0% | |
| TGTGATCGCAGGATGTACAG+CGG | - | Chr2:5786842-5786861 | MsG0280006748.01.T01:intron | 50.0% | |
| TTAGTAGCAGAGTTGCTCCC+AGG | + | Chr2:5786437-5786456 | None:intergenic | 50.0% | |
| ! | ATCATAGACAGTGGGGGTGT+TGG | + | Chr2:5786495-5786514 | None:intergenic | 50.0% |
| !! | CTTTGGGATGATACCGTTGC+TGG | - | Chr2:5786082-5786101 | MsG0280006748.01.T01:three_prime_UTR | 50.0% |
| !! | TCATAGACAGTGGGGGTGTT+GGG | + | Chr2:5786494-5786513 | None:intergenic | 50.0% |
| GTGATCGCAGGATGTACAGC+GGG | - | Chr2:5786843-5786862 | MsG0280006748.01.T01:intron | 55.0% | |
| TGATCGCAGGATGTACAGCG+GGG | - | Chr2:5786844-5786863 | MsG0280006748.01.T01:intron | 55.0% | |
| ! | AGCGTGGCCTTGAGAAGCTT+AGG | - | Chr2:5786116-5786135 | MsG0280006748.01.T01:three_prime_UTR | 55.0% |
| ! | GGAGGAGCGTGTTCAATCCT+GGG | - | Chr2:5786417-5786436 | MsG0280006748.01.T01:three_prime_UTR | 55.0% |
| ! | TGGAGGAGCGTGTTCAATCC+TGG | - | Chr2:5786416-5786435 | MsG0280006748.01.T01:three_prime_UTR | 55.0% |
| !! | CATAGACAGTGGGGGTGTTG+GGG | + | Chr2:5786493-5786512 | None:intergenic | 55.0% |
| AGCTTCTCAAGGCCACGCTC+AGG | + | Chr2:5786115-5786134 | None:intergenic | 60.0% | |
| GCCTTCGACACCGACAACAC+CGG | - | Chr2:5786349-5786368 | MsG0280006748.01.T01:three_prime_UTR | 60.0% | |
| GGATGTACAGCGGGGACACA+AGG | - | Chr2:5786852-5786871 | MsG0280006748.01.T01:intron | 60.0% | |
| ! | TCAAGGCCACGCTCAGGTTG+AGG | + | Chr2:5786109-5786128 | None:intergenic | 60.0% |
| !! | CAAGGCCACGCTCAGGTTGA+GGG | + | Chr2:5786108-5786127 | None:intergenic | 60.0% |
| !! | CGTGCCGATTGAGGTGTCGT+TGG | + | Chr2:5786380-5786399 | None:intergenic | 60.0% |
| !! | CTCAGGTTGAGGGCCAGCAA+CGG | + | Chr2:5786098-5786117 | None:intergenic | 60.0% |
| !! | GTTGGAGTCGCCGGTGTTGT+CGG | + | Chr2:5786362-5786381 | None:intergenic | 60.0% |
| !! | TGAGGTGTCGTTGGAGTCGC+CGG | + | Chr2:5786371-5786390 | None:intergenic | 60.0% |
| !! | ACAGTGGGGGTGTTGGGGAG+TGG | + | Chr2:5786488-5786507 | None:intergenic | 65.0% |
| !! | GCCGGTGTTGTCGGTGTCGA+AGG | + | Chr2:5786353-5786372 | None:intergenic | 65.0% |
| GCTGGCCCTCAACCTGAGCG+TGG | - | Chr2:5786100-5786119 | MsG0280006748.01.T01:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 5785888 | 5787235 | 5785888 | ID=MsG0280006748.01;Name=MsG0280006748.01 |
| Chr2 | mRNA | 5785888 | 5787235 | 5785888 | ID=MsG0280006748.01.T01;Parent=MsG0280006748.01;Name=MsG0280006748.01.T01;_AED=0.47;_eAED=0.47;_QI=182|1|1|1|1|1|2|679|113 |
| Chr2 | exon | 5785888 | 5786814 | 5785888 | ID=MsG0280006748.01.T01:exon:2354;Parent=MsG0280006748.01.T01 |
| Chr2 | exon | 5786960 | 5787235 | 5786960 | ID=MsG0280006748.01.T01:exon:2353;Parent=MsG0280006748.01.T01 |
| Chr2 | five_prime_UTR | 5787054 | 5787235 | 5787054 | ID=MsG0280006748.01.T01:five_prime_utr;Parent=MsG0280006748.01.T01 |
| Chr2 | CDS | 5786960 | 5787053 | 5786960 | ID=MsG0280006748.01.T01:cds;Parent=MsG0280006748.01.T01 |
| Chr2 | CDS | 5786567 | 5786814 | 5786567 | ID=MsG0280006748.01.T01:cds;Parent=MsG0280006748.01.T01 |
| Chr2 | three_prime_UTR | 5785888 | 5786566 | 5785888 | ID=MsG0280006748.01.T01:three_prime_utr;Parent=MsG0280006748.01.T01 |
| Gene Sequence |
| Protein sequence |
