AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046135.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046135.01.T01 MTR_4g100630 99.390 164 1 0 1 164 1 164 8.36e-117 343
MsG0880046135.01.T01 MTR_4g100630 81.068 206 36 1 184 389 124 326 2.06e-112 332
MsG0880046135.01.T01 MTR_2g100930 68.333 180 42 6 1 166 1 179 2.54e-70 225
MsG0880046135.01.T01 MTR_2g100930 40.602 133 68 5 259 386 212 338 1.87e-15 77.4
MsG0880046135.01.T01 MTR_5g037080 51.087 184 55 4 1 164 3 171 1.12e-45 159
MsG0880046135.01.T01 MTR_6g092540 50.289 173 64 4 1 161 1 163 7.35e-44 154
MsG0880046135.01.T01 MTR_8g101650 50.000 174 65 6 3 161 4 170 8.09e-40 143
MsG0880046135.01.T01 MTR_4g107230 53.797 158 62 5 15 167 5 156 5.67e-36 133
MsG0880046135.01.T01 MTR_1g111830 54.783 115 37 1 49 163 93 192 2.99e-34 127
MsG0880046135.01.T01 MTR_4g111975 72.603 73 20 0 89 161 132 204 3.76e-32 123
MsG0880046135.01.T01 MTR_3g462790 59.596 99 38 1 71 167 121 219 1.64e-31 122
MsG0880046135.01.T01 MTR_3g104370 43.293 164 80 3 1 159 3 158 9.16e-31 117
MsG0880046135.01.T01 MTR_5g069710 66.250 80 27 0 89 168 126 205 1.81e-30 119
MsG0880046135.01.T01 MTR_7g067080 70.667 75 22 0 87 161 132 206 5.42e-30 117
MsG0880046135.01.T01 MTR_0036s0260 68.657 67 21 0 96 162 29 95 6.09e-27 106
MsG0880046135.01.T01 MTR_5g081860 69.444 72 20 1 90 159 120 191 6.14e-27 108
MsG0880046135.01.T01 MTR_2g090305 67.164 67 22 0 96 162 29 95 4.56e-25 101
MsG0880046135.01.T01 MTR_8g063600 59.494 79 30 1 84 160 95 173 2.17e-24 102
MsG0880046135.01.T01 MTR_5g027570 36.220 127 77 2 47 169 42 168 1.18e-21 93.2
MsG0880046135.01.T01 MTR_5g088010 40.678 118 58 4 47 158 15 126 8.61e-20 88.2
MsG0880046135.01.T01 MTR_4g015130 65.455 55 19 0 105 159 3 57 2.73e-19 82.0
MsG0880046135.01.T01 MTR_5g027550 47.368 76 39 1 68 142 49 124 6.31e-18 82.4
MsG0880046135.01.T01 MTR_8g063870 50.000 76 30 2 92 159 83 158 1.05e-17 82.8
MsG0880046135.01.T01 MTR_5g088060 38.583 127 65 5 47 169 232 349 2.47e-17 84.0
MsG0880046135.01.T01 MTR_5g488160 38.583 127 65 5 47 169 232 349 2.47e-17 84.0
MsG0880046135.01.T01 MTR_1g048660 50.000 64 32 0 96 159 13 76 9.14e-17 75.5
MsG0880046135.01.T01 MTR_1g033620 63.462 52 19 0 110 161 20 71 1.38e-16 79.0
MsG0880046135.01.T01 MTR_1g083180 36.719 128 65 5 43 157 1 125 1.00e-14 72.4
MsG0880046135.01.T01 MTR_5g075760 36.364 110 54 3 76 170 75 183 4.07e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046135.01.T01 AT5G47390 55.283 407 104 11 1 384 1 352 2.65e-127 371
MsG0880046135.01.T01 AT3G16350 56.731 208 46 6 1 165 1 207 4.40e-53 181
MsG0880046135.01.T01 AT5G61620 51.977 177 63 5 1 163 8 176 8.97e-48 165
MsG0880046135.01.T01 AT1G70000 52.747 182 49 6 1 162 1 165 1.36e-46 160
MsG0880046135.01.T01 AT1G70000 52.747 182 49 6 1 162 1 165 1.36e-46 160
MsG0880046135.01.T01 AT5G56840 44.751 181 57 6 1 161 1 158 1.02e-37 136
MsG0880046135.01.T01 AT1G74840 52.258 155 58 5 21 167 22 168 5.95e-34 126
MsG0880046135.01.T01 AT1G74840 52.258 155 58 5 21 167 22 168 7.76e-34 127
MsG0880046135.01.T01 AT5G08520 54.000 100 46 0 62 161 85 184 8.82e-32 122
MsG0880046135.01.T01 AT1G19000 47.953 171 81 3 5 167 4 174 1.23e-31 121
MsG0880046135.01.T01 AT1G19000 47.953 171 81 3 5 167 4 174 1.23e-31 121
MsG0880046135.01.T01 AT1G49010 72.603 73 20 0 87 159 126 198 1.25e-31 122
MsG0880046135.01.T01 AT2G38090 72.000 75 21 0 90 164 136 210 2.19e-31 121
MsG0880046135.01.T01 AT5G04760 60.241 83 33 0 83 165 87 169 1.64e-30 116
MsG0880046135.01.T01 AT5G58900 72.857 70 19 0 90 159 136 205 3.08e-30 118
MsG0880046135.01.T01 AT3G11280 52.381 105 50 0 61 165 93 197 1.68e-28 112
MsG0880046135.01.T01 AT3G11280 52.381 105 50 0 61 165 93 197 1.68e-28 112
MsG0880046135.01.T01 AT5G01200 63.158 76 28 0 89 164 140 215 2.71e-27 109
MsG0880046135.01.T01 AT5G05790 63.636 77 28 0 83 159 119 195 2.42e-26 107
MsG0880046135.01.T01 AT5G05790 63.636 77 28 0 83 159 119 195 2.42e-26 107
MsG0880046135.01.T01 AT3G10580 49.485 97 47 1 68 164 68 162 1.17e-22 96.7
MsG0880046135.01.T01 AT3G10580 49.485 97 47 1 68 164 68 162 2.06e-22 96.7
MsG0880046135.01.T01 AT4G09450 51.685 89 40 1 75 160 68 156 1.75e-21 91.7
MsG0880046135.01.T01 AT5G23650 51.282 78 38 0 83 160 108 185 3.60e-20 90.9
MsG0880046135.01.T01 AT3G10590 48.276 87 41 3 79 162 92 177 4.52e-18 82.4

Find 148 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCCATTTCCTGGATATTT+TGG 0.116077 8:-69576413 MsG0880046135.01.T01:CDS
GCATATAGAATTTGGAAATA+AGG 0.226206 8:+69576626 None:intergenic
ACTTCATGTGTTTCTTTCTT+AGG 0.230059 8:+69575655 None:intergenic
TTCATCAAATATACTTGGTT+TGG 0.266321 8:-69575412 MsG0880046135.01.T01:three_prime_UTR
CATATAGAATTTGGAAATAA+GGG 0.275619 8:+69576627 None:intergenic
GTTTGTGTTTGTTTGCTTGT+AGG 0.301972 8:-69575343 MsG0880046135.01.T01:three_prime_UTR
ATCGACATTGATTGGGCTCT+TGG 0.306199 8:+69575609 None:intergenic
GATCCGGAAAAGTGCTAGTA+TGG 0.310152 8:-69578264 MsG0880046135.01.T01:CDS
GGTTTATTTGTATTTATGTT+TGG 0.320649 8:+69578493 None:intergenic
TGGGAAAATTGTCCATTTCC+TGG 0.329979 8:-69576422 MsG0880046135.01.T01:CDS
CATTGATGTCGGGCTTTAAT+GGG 0.332518 8:+69575776 None:intergenic
GCATTGATGTCGGGCTTTAA+TGG 0.338606 8:+69575775 None:intergenic
GTTGTGTTGTGTTGTGTTGT+TGG 0.344442 8:-69578563 MsG0880046135.01.T01:five_prime_UTR
TCTGTGTATTAATAATGTTC+TGG 0.345021 8:-69576376 MsG0880046135.01.T01:intron
AACAGCTTCACACCACGATT+TGG 0.346847 8:+69578308 None:intergenic
TCATCAAATATACTTGGTTT+GGG 0.349945 8:-69575411 MsG0880046135.01.T01:three_prime_UTR
ATTGGGCTCTTGGAATGTAC+TGG 0.350663 8:+69575619 None:intergenic
ATTTGTATTTATGTTTGGTT+TGG 0.350949 8:+69578498 None:intergenic
ACGAGTTCATCGACATTGAT+TGG 0.357821 8:+69575601 None:intergenic
CTCCCTGCATTTGTTACACT+GGG 0.361159 8:+69575153 None:intergenic
CACTATAGCGGGTCCGGGTC+TGG 0.363851 8:-69578230 MsG0880046135.01.T01:CDS
GGTGAAACTATTGGTGATAC+TGG 0.369014 8:-69575556 MsG0880046135.01.T01:CDS
TTTCCTCTTCCATATTGGTC+TGG 0.369873 8:-69575697 MsG0880046135.01.T01:CDS
AACGAGAGAGGTGAATTATC+AGG 0.373216 8:+69578403 None:intergenic
TGTGTTTCTTTCTTAGGAGC+TGG 0.373891 8:+69575661 None:intergenic
CCTTGATATAACATAGTTCC+TGG 0.379937 8:+69576762 None:intergenic
CCTCCCTGCATTTGTTACAC+TGG 0.381440 8:+69575152 None:intergenic
ATGTTTGGTTTGGTCTCCCT+CGG 0.397830 8:+69578508 None:intergenic
CTTAGCCACTATAGCGGGTC+CGG 0.398806 8:-69578236 MsG0880046135.01.T01:CDS
ACAAACTAGGTTAACCATTC+TGG 0.399924 8:+69575360 None:intergenic
TTCAATTTCATTTCATGCCT+CGG 0.409007 8:-69578450 MsG0880046135.01.T01:five_prime_UTR
CATCCAAAATATCCAGGAAA+TGG 0.413994 8:+69576410 None:intergenic
GATCATGGTGCTGATGGTTA+TGG 0.418054 8:-69578158 MsG0880046135.01.T01:CDS
TAACCATCAGCACCATGATC+AGG 0.421312 8:+69578161 None:intergenic
CTCTTGGAATGTACTGGGGT+TGG 0.426876 8:+69575625 None:intergenic
GCTTGTAGGCAGTAGTATCT+AGG 0.428846 8:-69575329 MsG0880046135.01.T01:three_prime_UTR
TTCATACAACTCCAGCTTGT+GGG 0.433206 8:-69575477 MsG0880046135.01.T01:CDS
TTGGGCTCTTGGAATGTACT+GGG 0.435041 8:+69575620 None:intergenic
GGAAGAGGAAAAGGGAAGAA+TGG 0.436557 8:+69575709 None:intergenic
AGTAGTATCTAGGATTTACT+TGG 0.439017 8:-69575319 MsG0880046135.01.T01:three_prime_UTR
GACCAATATGGAAGAGGAAA+AGG 0.441108 8:+69575700 None:intergenic
TGCGGTACCATTGAAGTATC+AGG 0.442348 8:+69575931 None:intergenic
CTGAGTTTAGGTGAAACTAT+TGG 0.449826 8:-69575565 MsG0880046135.01.T01:CDS
ACGGGTCATGATTTCTGAAC+CGG 0.452893 8:+69578376 None:intergenic
GCAGGCACCTGATACTTCAA+TGG 0.455907 8:-69575938 MsG0880046135.01.T01:intron
GACGCTTGTGCATTGATGTC+GGG 0.457053 8:+69575766 None:intergenic
ATGCCTCGGATCCTGTGATT+CGG 0.462408 8:-69578436 MsG0880046135.01.T01:five_prime_UTR
GGACTGTATCCAGACCAATA+TGG 0.463662 8:+69575688 None:intergenic
AATCGTGGTGTGAAGCTGTT+TGG 0.464828 8:-69578305 MsG0880046135.01.T01:CDS
CGAGTTCATCGACATTGATT+GGG 0.465415 8:+69575602 None:intergenic
CATCTGCAACAATATCAAAC+AGG 0.473584 8:+69576659 None:intergenic
TGTAATTCATCAAATATACT+TGG 0.476466 8:-69575417 MsG0880046135.01.T01:three_prime_UTR
TGCACAAGCGTCGGCTTACC+CGG 0.477679 8:-69575755 MsG0880046135.01.T01:CDS
TGAAAAGCCGACTGTCTAGA+AGG 0.477844 8:+69575496 None:intergenic
ACAAGCTGGGCAAAGGTGAT+TGG 0.481462 8:-69576795 MsG0880046135.01.T01:CDS
GTTCTCATTGCAGCCACAAT+GGG 0.482827 8:-69578349 MsG0880046135.01.T01:CDS
TCATCGAGTGGAGGAGGAGC+AGG 0.484781 8:+69575853 None:intergenic
TTCACCTCTCTCGTTCGATC+CGG 0.485313 8:-69578395 MsG0880046135.01.T01:five_prime_UTR
CTATGTTCCTCCTCAGTCCA+TGG 0.485937 8:+69576838 None:intergenic
GAGGCATGAAATGAAATTGA+AGG 0.488386 8:+69578452 None:intergenic
GGCATGTCAAAACTGAGTTT+AGG 0.490022 8:-69575577 MsG0880046135.01.T01:CDS
TAAGATTAACCGATGGGATC+CGG 0.490318 8:-69578280 MsG0880046135.01.T01:CDS
TCTTTCTTAGGAGCTGGCTC+AGG 0.491218 8:+69575667 None:intergenic
AAGCCCAGTGTAACAAATGC+AGG 0.493114 8:-69575156 MsG0880046135.01.T01:three_prime_UTR
AAGAATGGAGAATAATATGC+TGG 0.499540 8:+69575724 None:intergenic
GTTTGAGTTTGTAGAATCCA+TGG 0.503591 8:+69575819 None:intergenic
CGACGCTTGTGCATTGATGT+CGG 0.504753 8:+69575765 None:intergenic
GTGATTGGCGTGGAATTGCC+AGG 0.506530 8:-69576780 MsG0880046135.01.T01:CDS
CATCAACATCCAAAATATCC+AGG 0.508072 8:+69576404 None:intergenic
CAGACCCGGACCCGCTATAG+TGG 0.508114 8:+69578231 None:intergenic
CTTAAATAGGAAGCACAACT+TGG 0.509265 8:+69575204 None:intergenic
CACAGAACAGTCCCACAAGC+TGG 0.510753 8:+69575466 None:intergenic
TTACTTGGATTGAACAAGCT+GGG 0.512315 8:-69576808 MsG0880046135.01.T01:CDS
CATTCTTCATCGAGTGGAGG+AGG 0.516097 8:+69575847 None:intergenic
ACCAATATGGAAGAGGAAAA+GGG 0.517539 8:+69575701 None:intergenic
CCAGGAACTATGTTATATCA+AGG 0.521846 8:-69576762 MsG0880046135.01.T01:CDS
AGTGGAGGAGGAGCAGGCAA+AGG 0.525729 8:+69575859 None:intergenic
TTTACTTGGATTGAACAAGC+TGG 0.526943 8:-69576809 MsG0880046135.01.T01:CDS
TCAAATACTCCTGGTTCACC+TGG 0.529002 8:-69578191 MsG0880046135.01.T01:CDS
TAAGAAAGAAACACATGAAG+TGG 0.531198 8:-69575653 MsG0880046135.01.T01:CDS
CAAGCAAACAAACACAAACT+AGG 0.532269 8:+69575347 None:intergenic
TAATATGCTGGATATACTAC+CGG 0.533057 8:+69575736 None:intergenic
CGATGAAGAATGTGAGTCCA+TGG 0.537872 8:-69575836 MsG0880046135.01.T01:CDS
TTATATGCAACATAATGTAA+AGG 0.539018 8:+69576590 None:intergenic
ATGGTAATGAACAGGTTATG+TGG 0.542103 8:+69576556 None:intergenic
GTGGAGGAGGAGCAGGCAAA+GGG 0.545011 8:+69575860 None:intergenic
TGTTTGGTTTGGTCTCCCTC+GGG 0.548440 8:+69578509 None:intergenic
CAGTGTAACAAATGCAGGGA+GGG 0.551445 8:-69575151 MsG0880046135.01.T01:three_prime_UTR
AACCCTGATCATGGTGCTGA+TGG 0.553194 8:-69578164 MsG0880046135.01.T01:CDS
GTAGTATCTAGGATTTACTT+GGG 0.553645 8:-69575318 MsG0880046135.01.T01:three_prime_UTR
GTCGGGCTTTAATGGGGCAG+AGG 0.557337 8:+69575783 None:intergenic
TGCAACAATATCAAACAGGC+TGG 0.557484 8:+69576663 None:intergenic
TGTTCTCATTGCAGCCACAA+TGG 0.558526 8:-69578350 MsG0880046135.01.T01:CDS
GGTAATCTTAGCCACTATAG+CGG 0.560908 8:-69578242 MsG0880046135.01.T01:CDS
TCTCGTAAACTACTTGAAGA+AGG 0.563354 8:-69575520 MsG0880046135.01.T01:CDS
GATTCTACAAACTCAAACGA+TGG 0.564664 8:-69575814 MsG0880046135.01.T01:CDS
TATCCAGACCAATATGGAAG+AGG 0.565662 8:+69575694 None:intergenic
TTAGCCACTATAGCGGGTCC+GGG 0.567360 8:-69578235 MsG0880046135.01.T01:CDS
TTTCATACAACTCCAGCTTG+TGG 0.570031 8:-69575478 MsG0880046135.01.T01:CDS
AGTGTAACAAATGCAGGGAG+GGG 0.571126 8:-69575150 MsG0880046135.01.T01:three_prime_UTR
AGTTTACGAGACAGAGTCGA+GGG 0.572728 8:+69575532 None:intergenic
TCAGGCAAAGCAATGTGTCT+AGG 0.575738 8:-69576699 MsG0880046135.01.T01:CDS
AATACCGGGTCAAATACTCC+TGG 0.575888 8:-69578200 MsG0880046135.01.T01:CDS
TTGGAGTAAGATTAACCGAT+GGG 0.581339 8:-69578286 MsG0880046135.01.T01:CDS
TGCTGATGGTTATGGTTCTG+AGG 0.588306 8:-69578150 MsG0880046135.01.T01:CDS
GGATTGAACAAGCTGGGCAA+AGG 0.588333 8:-69576802 MsG0880046135.01.T01:CDS
AACCATCAGCACCATGATCA+GGG 0.589650 8:+69578162 None:intergenic
CCTGGTGAAAACCCTGATCA+TGG 0.590290 8:-69578173 MsG0880046135.01.T01:CDS
GTAATCTTAGCCACTATAGC+GGG 0.591144 8:-69578241 MsG0880046135.01.T01:CDS
CGGGAAGTAGAAGAAGAACC+AGG 0.591204 8:+69578119 None:intergenic
ACTAGGTTAACCATTCTGGA+AGG 0.591528 8:+69575364 None:intergenic
CTCTGCAGCAGCAAAACCCG+AGG 0.598531 8:-69578525 MsG0880046135.01.T01:five_prime_UTR
ATCAATGTCGATGAACTCGT+TGG 0.598709 8:-69575598 MsG0880046135.01.T01:CDS
GACTCACATTCTTCATCGAG+TGG 0.599669 8:+69575841 None:intergenic
AGAAGGTCCTTCTAGACAGT+CGG 0.599702 8:-69575503 MsG0880046135.01.T01:CDS
CAACTACAAACTGAAACAGA+AGG 0.603118 8:-69575889 MsG0880046135.01.T01:CDS
ATTGATGTCGGGCTTTAATG+GGG 0.617600 8:+69575777 None:intergenic
ATCCGGAAAAGTGCTAGTAT+GGG 0.617740 8:-69578263 MsG0880046135.01.T01:CDS
AGCCCAGTGTAACAAATGCA+GGG 0.618200 8:-69575155 MsG0880046135.01.T01:three_prime_UTR
TTCTTGAGTTGTGCCCATTG+TGG 0.619382 8:+69578336 None:intergenic
ATCAAGGACACCTACTCAAG+TGG 0.620432 8:-69576746 MsG0880046135.01.T01:CDS
TGAACCGGATCGAACGAGAG+AGG 0.621078 8:+69578391 None:intergenic
ATATAGAATTTGGAAATAAG+GGG 0.622696 8:+69576628 None:intergenic
GCTGCAATGAGAACAACGAC+GGG 0.624049 8:+69578358 None:intergenic
CGACATCAATGCACAAGCGT+CGG 0.624911 8:-69575764 MsG0880046135.01.T01:CDS
CTGGGCAAAGGTGATTGGCG+TGG 0.626265 8:-69576790 MsG0880046135.01.T01:CDS
GATCCGAATCACAGGATCCG+AGG 0.626517 8:+69578433 None:intergenic
CTAGGTTAACCATTCTGGAA+GGG 0.628075 8:+69575365 None:intergenic
TTTGGAGTAAGATTAACCGA+TGG 0.628079 8:-69578287 MsG0880046135.01.T01:CDS
ATGTGTCTAGGCGGAAGAGA+CGG 0.634804 8:-69576687 MsG0880046135.01.T01:CDS
AATATGCTGGATATACTACC+GGG 0.636844 8:+69575737 None:intergenic
TGGGCTCTTGGAATGTACTG+GGG 0.642523 8:+69575621 None:intergenic
GCGTGACTGGCCACTTGAGT+AGG 0.645270 8:+69576736 None:intergenic
GGCTGCAATGAGAACAACGA+CGG 0.647502 8:+69578357 None:intergenic
TTAGCTGACAAGAAGTCTTG+CGG 0.653600 8:+69575913 None:intergenic
TGCAGGCACTCCATGGACTG+AGG 0.655185 8:-69576848 MsG0880046135.01.T01:intron
GGTATTCAAAAGTCCAGACC+CGG 0.655952 8:+69578217 None:intergenic
TGAGCATTATTATCATGATG+TGG 0.662122 8:-69575445 MsG0880046135.01.T01:three_prime_UTR
AACATTATTAATACACAGAG+AGG 0.663388 8:+69576380 None:intergenic
TCAAGAACTTGTCCAAATCG+TGG 0.664250 8:-69578320 MsG0880046135.01.T01:CDS
TAGTTTACGAGACAGAGTCG+AGG 0.668337 8:+69575531 None:intergenic
TCACATTCTTCATCGAGTGG+AGG 0.671641 8:+69575844 None:intergenic
TCTGCAGCAGCAAAACCCGA+GGG 0.677080 8:-69578524 MsG0880046135.01.T01:five_prime_UTR
AGGCACTCCATGGACTGAGG+AGG 0.685831 8:-69576845 MsG0880046135.01.T01:CDS
GGCAAAGCAATGTGTCTAGG+CGG 0.687559 8:-69576696 MsG0880046135.01.T01:CDS
CCAGTGTAACAAATGCAGGG+AGG 0.692978 8:-69575152 MsG0880046135.01.T01:three_prime_UTR
TGAACCAGGAGTATTTGACC+CGG 0.708436 8:+69578196 None:intergenic
GTTTACGAGACAGAGTCGAG+GGG 0.738520 8:+69575533 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAAAAGTATTAAAAAAAA+CGG + Chr8:69577507-69577526 None:intergenic 10.0%
!!! ATTTTTAATATTTTATTTGC+AGG - Chr8:69576829-69576848 MsG0880046135.01.T01:CDS 10.0%
!! ATTAAAGAAAAAAACACATT+TGG + Chr8:69577177-69577196 None:intergenic 15.0%
!! ATTATTATGTTTGTTTAACT+TGG - Chr8:69575984-69576003 MsG0880046135.01.T01:intron 15.0%
!!! AAATATCATTTAAAGCAAAA+AGG + Chr8:69576590-69576609 None:intergenic 15.0%
!!! TTATATTTTTGATTTTTGGT+TGG - Chr8:69575777-69575796 MsG0880046135.01.T01:CDS 15.0%
!! ATATAGAATTTGGAAATAAG+GGG + Chr8:69577069-69577088 None:intergenic 20.0%
!! ATTTGGATAATCTTATCAAA+TGG + Chr8:69577160-69577179 None:intergenic 20.0%
!! ATTTGTATTTATGTTTGGTT+TGG + Chr8:69575199-69575218 None:intergenic 20.0%
!! CATATAGAATTTGGAAATAA+GGG + Chr8:69577070-69577089 None:intergenic 20.0%
!! GGTTTATTTGTATTTATGTT+TGG + Chr8:69575204-69575223 None:intergenic 20.0%
!! TAAAACATTGGTATTTAGTT+TGG - Chr8:69577607-69577626 MsG0880046135.01.T01:intron 20.0%
!! TGTAATTCATCAAATATACT+TGG - Chr8:69578277-69578296 MsG0880046135.01.T01:CDS 20.0%
!! TTATATGCAACATAATGTAA+AGG + Chr8:69577107-69577126 None:intergenic 20.0%
!! TTTGAATTCAATTATATAGC+TGG - Chr8:69577446-69577465 MsG0880046135.01.T01:intron 20.0%
!!! AAATGAAATTGAAGGTTTTA+AGG + Chr8:69575237-69575256 None:intergenic 20.0%
!!! AATATGCTCTTTTAACTATA+TGG - Chr8:69576228-69576247 MsG0880046135.01.T01:intron 20.0%
!!! ATCTGAAATATATTGAATGT+TGG - Chr8:69575892-69575911 MsG0880046135.01.T01:CDS 20.0%
!!! CATTTTAAGCATATAGAATT+TGG + Chr8:69577079-69577098 None:intergenic 20.0%
!!! TAATGTTAGGTATACTTTTT+TGG - Chr8:69576665-69576684 MsG0880046135.01.T01:CDS 20.0%
!!! TATTTTTGTTTTGATTTTGC+AGG - Chr8:69577738-69577757 MsG0880046135.01.T01:intron 20.0%
!!! TTTGCTTTAAATGATATTTG+TGG - Chr8:69576591-69576610 MsG0880046135.01.T01:CDS 20.0%
! AACATTATTAATACACAGAG+AGG + Chr8:69577317-69577336 None:intergenic 25.0%
! AGGGCAAGTAAAAATTATTA+AGG + Chr8:69578313-69578332 None:intergenic 25.0%
! ATCAAATTAGTGAGAAATAC+GGG + Chr8:69577572-69577591 None:intergenic 25.0%
! ATTTCTCACTAATTTGATGT+CGG - Chr8:69577574-69577593 MsG0880046135.01.T01:intron 25.0%
! CATCAAATTAGTGAGAAATA+CGG + Chr8:69577573-69577592 None:intergenic 25.0%
! CTAGATGAATTCAAGTATAT+TGG - Chr8:69575696-69575715 MsG0880046135.01.T01:CDS 25.0%
! GCATATAGAATTTGGAAATA+AGG + Chr8:69577071-69577090 None:intergenic 25.0%
! GTCTATGATAGATTAAATAC+CGG - Chr8:69576137-69576156 MsG0880046135.01.T01:intron 25.0%
! GTGAACTATATGCATATTAA+TGG + Chr8:69576051-69576070 None:intergenic 25.0%
! TAAATTATGTGATCTTGGTT+TGG - Chr8:69575720-69575739 MsG0880046135.01.T01:CDS 25.0%
! TCATCAAATATACTTGGTTT+GGG - Chr8:69578283-69578302 MsG0880046135.01.T01:CDS 25.0%
! TCTATGATAGATTAAATACC+GGG - Chr8:69576138-69576157 MsG0880046135.01.T01:intron 25.0%
! TCTGTGTATTAATAATGTTC+TGG - Chr8:69577318-69577337 MsG0880046135.01.T01:intron 25.0%
! TTCAAATAGTCACTAATGTT+AGG - Chr8:69576652-69576671 MsG0880046135.01.T01:CDS 25.0%
! TTCATCAAATATACTTGGTT+TGG - Chr8:69578282-69578301 MsG0880046135.01.T01:CDS 25.0%
! TTGGATAAATTATGTGATCT+TGG - Chr8:69575715-69575734 MsG0880046135.01.T01:CDS 25.0%
!! ATGATATTGTTTGACCTTTT+AGG - Chr8:69577195-69577214 MsG0880046135.01.T01:intron 25.0%
!! ATTTTCAAAGAATCCCTAAA+AGG + Chr8:69577212-69577231 None:intergenic 25.0%
!! CTTTTTGACAACACTTAAAT+AGG + Chr8:69578506-69578525 None:intergenic 25.0%
!! TGATATTGTTTGACCTTTTA+GGG - Chr8:69577196-69577215 MsG0880046135.01.T01:intron 25.0%
!! TTAAATGAGTCAAAGGTTTT+AGG + Chr8:69576694-69576713 None:intergenic 25.0%
!! TTCTGAACCTTCTAATTTTT+CGG - Chr8:69577706-69577725 MsG0880046135.01.T01:intron 25.0%
!! TTTCAACTTTTCATTTCTCA+AGG - Chr8:69578433-69578452 MsG0880046135.01.T01:five_prime_UTR 25.0%
!!! AGGTTTTAAGGTTTTGTTTT+TGG + Chr8:69575225-69575244 None:intergenic 25.0%
!!! GAACATAGAATGTTTTTACT+TGG - Chr8:69576871-69576890 MsG0880046135.01.T01:intron 25.0%
!!! GTCTTTTTTGAGAGAATTAT+TGG - Chr8:69575861-69575880 MsG0880046135.01.T01:CDS 25.0%
AACCTAGTTAAATGAGTCAA+AGG + Chr8:69576701-69576720 None:intergenic 30.0%
AACCTTTGACTCATTTAACT+AGG - Chr8:69576696-69576715 MsG0880046135.01.T01:CDS 30.0%
AAGAATGGAGAATAATATGC+TGG + Chr8:69577973-69577992 None:intergenic 30.0%
AATTCAATTATATAGCTGGC+TGG - Chr8:69577450-69577469 MsG0880046135.01.T01:intron 30.0%
AATTGAATTCAAACCAACCA+GGG + Chr8:69577439-69577458 None:intergenic 30.0%
ACGCTCAAAAATATTTCATC+AGG - Chr8:69576977-69576996 MsG0880046135.01.T01:intron 30.0%
ACTTCATGTGTTTCTTTCTT+AGG + Chr8:69578042-69578061 None:intergenic 30.0%
AGAAATCCCGAAAAATTAGA+AGG + Chr8:69577716-69577735 None:intergenic 30.0%
ATCATGACTGAAACAATCTT+TGG - Chr8:69576307-69576326 MsG0880046135.01.T01:intron 30.0%
GAAAAATTAGAAGGTTCAGA+AGG + Chr8:69577707-69577726 None:intergenic 30.0%
GTATTCTAGTGCCTAATTAT+GGG - Chr8:69576016-69576035 MsG0880046135.01.T01:intron 30.0%
GTTAGATATTGATAGAACCA+TGG - Chr8:69577340-69577359 MsG0880046135.01.T01:intron 30.0%
TAAGAAAGAAACACATGAAG+TGG - Chr8:69578041-69578060 MsG0880046135.01.T01:intron 30.0%
TAATATGCTGGATATACTAC+CGG + Chr8:69577961-69577980 None:intergenic 30.0%
TAATTGAATTCAAACCAACC+AGG + Chr8:69577440-69577459 None:intergenic 30.0%
TATTCTAGTGCCTAATTATG+GGG - Chr8:69576017-69576036 MsG0880046135.01.T01:intron 30.0%
TGACTCATTTAACTAGGTTT+CGG - Chr8:69576702-69576721 MsG0880046135.01.T01:CDS 30.0%
TGAGCATTATTATCATGATG+TGG - Chr8:69578249-69578268 MsG0880046135.01.T01:CDS 30.0%
TGTATTCTAGTGCCTAATTA+TGG - Chr8:69576015-69576034 MsG0880046135.01.T01:intron 30.0%
TTCAATTTCATTTCATGCCT+CGG - Chr8:69575244-69575263 MsG0880046135.01.T01:three_prime_UTR 30.0%
TTTCTCACTAATTTGATGTC+GGG - Chr8:69577575-69577594 MsG0880046135.01.T01:intron 30.0%
TTTGCTTGCATGTGAATTAT+TGG - Chr8:69575646-69575665 MsG0880046135.01.T01:CDS 30.0%
! AAACATTGCATTTTCTGATG+TGG - Chr8:69577635-69577654 MsG0880046135.01.T01:intron 30.0%
! AAATGGACAATTTTCCCAAA+TGG + Chr8:69577270-69577289 None:intergenic 30.0%
! AGTAGTATCTAGGATTTACT+TGG - Chr8:69578375-69578394 MsG0880046135.01.T01:exon 30.0%
! CTTATCAAATGGTAATGAAC+AGG + Chr8:69577149-69577168 None:intergenic 30.0%
! GTAGTATCTAGGATTTACTT+GGG - Chr8:69578376-69578395 MsG0880046135.01.T01:exon 30.0%
! GTCTATCTAAAGTTTGATCT+AGG + Chr8:69576568-69576587 None:intergenic 30.0%
! TCTGAACCTTCTAATTTTTC+GGG - Chr8:69577707-69577726 MsG0880046135.01.T01:intron 30.0%
! TGCACAGAGTATTAGATTTA+GGG + Chr8:69576508-69576527 None:intergenic 30.0%
! TTGAATGTTGGTCTAAGAAA+TGG - Chr8:69575904-69575923 MsG0880046135.01.T01:CDS 30.0%
! TTGCACAGAGTATTAGATTT+AGG + Chr8:69576509-69576528 None:intergenic 30.0%
!! AACATTGGTATTTAGTTTGG+AGG - Chr8:69577610-69577629 MsG0880046135.01.T01:intron 30.0%
!! GCTCTTTTAACTATATGGTT+CGG - Chr8:69576233-69576252 MsG0880046135.01.T01:intron 30.0%
!!! AACATTGTTTTTGAACCACA+TGG + Chr8:69575948-69575967 None:intergenic 30.0%
!!! ACAAACCCTTTTTTCTTTCA+CGG + Chr8:69575598-69575617 None:intergenic 30.0%
!!! GGGACTGATTTTTAAAACAT+TGG - Chr8:69577595-69577614 MsG0880046135.01.T01:intron 30.0%
!!! TGTTAGGTATACTTTTTTGG+AGG - Chr8:69576668-69576687 MsG0880046135.01.T01:CDS 30.0%
!!! TTTGGCAATGTTTTAATAGC+CGG - Chr8:69577373-69577392 MsG0880046135.01.T01:intron 30.0%
!!! TTTTTGGTTGGTGTAATTGT+AGG - Chr8:69575789-69575808 MsG0880046135.01.T01:CDS 30.0%
AAGAAATGTGACCCTATTCA+GGG + Chr8:69576456-69576475 None:intergenic 35.0%
AATATGCTGGATATACTACC+GGG + Chr8:69577960-69577979 None:intergenic 35.0%
AATGGATAGGTATAAGTCTC+AGG - Chr8:69575922-69575941 MsG0880046135.01.T01:CDS 35.0%
AATTCACATGCAAGCAAAAG+AGG + Chr8:69575644-69575663 None:intergenic 35.0%
ACAAACTAGGTTAACCATTC+TGG + Chr8:69578337-69578356 None:intergenic 35.0%
ACATTACAGTCAGCTTCAAT+GGG - Chr8:69576766-69576785 MsG0880046135.01.T01:CDS 35.0%
ACATTTCTTAAACGACGACA+TGG - Chr8:69576467-69576486 MsG0880046135.01.T01:intron 35.0%
ACCAATATGGAAGAGGAAAA+GGG + Chr8:69577996-69578015 None:intergenic 35.0%
ACCTGGACAAAAATAAAGCT+TGG + Chr8:69576333-69576352 None:intergenic 35.0%
ACTTCCCGTGAAAGAAAAAA+GGG - Chr8:69575590-69575609 MsG0880046135.01.T01:CDS 35.0%
ATTACACACAACCCTGAATA+GGG - Chr8:69576442-69576461 MsG0880046135.01.T01:CDS 35.0%
ATTCTAGTGCCTAATTATGG+GGG - Chr8:69576018-69576037 MsG0880046135.01.T01:intron 35.0%
CAAATTCAGCTAAACAGTAC+TGG + Chr8:69576729-69576748 None:intergenic 35.0%
CAACTACAAACTGAAACAGA+AGG - Chr8:69577805-69577824 MsG0880046135.01.T01:intron 35.0%
CAAGCAAACAAACACAAACT+AGG + Chr8:69578350-69578369 None:intergenic 35.0%
CATCAACATCCAAAATATCC+AGG + Chr8:69577293-69577312 None:intergenic 35.0%
CATCCAAAATATCCAGGAAA+TGG + Chr8:69577287-69577306 None:intergenic 35.0%
CATCTGCAACAATATCAAAC+AGG + Chr8:69577038-69577057 None:intergenic 35.0%
CCAGGAACTATGTTATATCA+AGG - Chr8:69576932-69576951 MsG0880046135.01.T01:intron 35.0%
CCTTGATATAACATAGTTCC+TGG + Chr8:69576935-69576954 None:intergenic 35.0%
CTGAGTTTAGGTGAAACTAT+TGG - Chr8:69578129-69578148 MsG0880046135.01.T01:CDS 35.0%
CTGTTTCAGCTATCTAAACT+AGG - Chr8:69576070-69576089 MsG0880046135.01.T01:intron 35.0%
GAGGCATGAAATGAAATTGA+AGG + Chr8:69575245-69575264 None:intergenic 35.0%
GATTCTACAAACTCAAACGA+TGG - Chr8:69577880-69577899 MsG0880046135.01.T01:intron 35.0%
GGTTCAAGACACAGAAAAAA+TGG - Chr8:69576386-69576405 MsG0880046135.01.T01:CDS 35.0%
GTTTGTGTTTGTTTGCTTGT+AGG - Chr8:69578351-69578370 MsG0880046135.01.T01:CDS 35.0%
TAAGAAATGTGACCCTATTC+AGG + Chr8:69576457-69576476 None:intergenic 35.0%
TACTTCCCGTGAAAGAAAAA+AGG - Chr8:69575589-69575608 MsG0880046135.01.T01:CDS 35.0%
TAGGAGTAACTAGACAAGAA+AGG - Chr8:69575808-69575827 MsG0880046135.01.T01:CDS 35.0%
TCTCGTAAACTACTTGAAGA+AGG - Chr8:69578174-69578193 MsG0880046135.01.T01:CDS 35.0%
TTACTTGGATTGAACAAGCT+GGG - Chr8:69576886-69576905 MsG0880046135.01.T01:intron 35.0%
TTAGAAGGTTCAGAAGGAAA+AGG + Chr8:69577701-69577720 None:intergenic 35.0%
TTGGAGTAAGATTAACCGAT+GGG - Chr8:69575408-69575427 MsG0880046135.01.T01:three_prime_UTR 35.0%
TTTACTTGGATTGAACAAGC+TGG - Chr8:69576885-69576904 MsG0880046135.01.T01:intron 35.0%
! ATGGTAATGAACAGGTTATG+TGG + Chr8:69577141-69577160 None:intergenic 35.0%
! CTTAAATAGGAAGCACAACT+TGG + Chr8:69578493-69578512 None:intergenic 35.0%
! GCACAGAGTATTAGATTTAG+GGG + Chr8:69576507-69576526 None:intergenic 35.0%
! GTTTGAGTTTGTAGAATCCA+TGG + Chr8:69577878-69577897 None:intergenic 35.0%
! TGTCCATTTCCTGGATATTT+TGG - Chr8:69577281-69577300 MsG0880046135.01.T01:intron 35.0%
! TGTTGGTCTAAGAAATGGAT+AGG - Chr8:69575909-69575928 MsG0880046135.01.T01:CDS 35.0%
! TTTGGAGTAAGATTAACCGA+TGG - Chr8:69575407-69575426 MsG0880046135.01.T01:three_prime_UTR 35.0%
! TTTTCTGTGTCTTGAACCTT+CGG + Chr8:69576384-69576403 None:intergenic 35.0%
!! GAAATATTTTTGAGCGTGAC+TGG + Chr8:69576974-69576993 None:intergenic 35.0%
!! TATGTGATCTTGGTTTGGAT+TGG - Chr8:69575725-69575744 MsG0880046135.01.T01:CDS 35.0%
!!! CAAACCCTTTTTTCTTTCAC+GGG + Chr8:69575597-69575616 None:intergenic 35.0%
AACGAGAGAGGTGAATTATC+AGG + Chr8:69575294-69575313 None:intergenic 40.0%
ACCAACAACACAACACAACA+CGG + Chr8:69575135-69575154 None:intergenic 40.0%
ACGAGTTCATCGACATTGAT+TGG + Chr8:69578096-69578115 None:intergenic 40.0%
ACTAGGTTAACCATTCTGGA+AGG + Chr8:69578333-69578352 None:intergenic 40.0%
ATAGATTAAATACCGGGCTG+TGG - Chr8:69576144-69576163 MsG0880046135.01.T01:intron 40.0%
ATCAATGTCGATGAACTCGT+TGG - Chr8:69578096-69578115 MsG0880046135.01.T01:intron 40.0%
ATTGATAGAACCATGGCTCT+GGG - Chr8:69577347-69577366 MsG0880046135.01.T01:intron 40.0%
CAATGCTTGCAGATCATTAG+GGG + Chr8:69576204-69576223 None:intergenic 40.0%
CACATTACAGTCAGCTTCAA+TGG - Chr8:69576765-69576784 MsG0880046135.01.T01:CDS 40.0%
CATTACAGTCAGCTTCAATG+GGG - Chr8:69576767-69576786 MsG0880046135.01.T01:CDS 40.0%
CCAATGCTTGCAGATCATTA+GGG + Chr8:69576205-69576224 None:intergenic 40.0%
GACCAATATGGAAGAGGAAA+AGG + Chr8:69577997-69578016 None:intergenic 40.0%
GATTACACACAACCCTGAAT+AGG - Chr8:69576441-69576460 MsG0880046135.01.T01:CDS 40.0%
GGCATGTCAAAACTGAGTTT+AGG - Chr8:69578117-69578136 MsG0880046135.01.T01:CDS 40.0%
GGTAATCTTAGCCACTATAG+CGG - Chr8:69575452-69575471 MsG0880046135.01.T01:exon 40.0%
GTAATCTTAGCCACTATAGC+GGG - Chr8:69575453-69575472 MsG0880046135.01.T01:exon 40.0%
TAAGATTAACCGATGGGATC+CGG - Chr8:69575414-69575433 MsG0880046135.01.T01:three_prime_UTR 40.0%
TATCCAGACCAATATGGAAG+AGG + Chr8:69578003-69578022 None:intergenic 40.0%
TATTGATAGAACCATGGCTC+TGG - Chr8:69577346-69577365 MsG0880046135.01.T01:intron 40.0%
TCAAGAACTTGTCCAAATCG+TGG - Chr8:69575374-69575393 MsG0880046135.01.T01:three_prime_UTR 40.0%
TGCAACAATATCAAACAGGC+TGG + Chr8:69577034-69577053 None:intergenic 40.0%
TGGGAAAATTGTCCATTTCC+TGG - Chr8:69577272-69577291 MsG0880046135.01.T01:intron 40.0%
TGTGTTTCTTTCTTAGGAGC+TGG + Chr8:69578036-69578055 None:intergenic 40.0%
TTAGCTGACAAGAAGTCTTG+CGG + Chr8:69577784-69577803 None:intergenic 40.0%
TTAGTGAGAAATACGGGTCA+TGG + Chr8:69577566-69577585 None:intergenic 40.0%
TTCAGTCATGATTCGAACTC+TGG + Chr8:69576299-69576318 None:intergenic 40.0%
TTCATACAACTCCAGCTTGT+GGG - Chr8:69578217-69578236 MsG0880046135.01.T01:CDS 40.0%
TTTCATACAACTCCAGCTTG+TGG - Chr8:69578216-69578235 MsG0880046135.01.T01:CDS 40.0%
TTTCCTCTTCCATATTGGTC+TGG - Chr8:69577997-69578016 MsG0880046135.01.T01:intron 40.0%
TTTCTGTGTCTTGAACCTTC+GGG + Chr8:69576383-69576402 None:intergenic 40.0%
! ATTGATGTCGGGCTTTAATG+GGG + Chr8:69577920-69577939 None:intergenic 40.0%
! CACGACACTGTTTTCCATTT+GGG - Chr8:69577253-69577272 MsG0880046135.01.T01:intron 40.0%
! CAGAGTATTAGATTTAGGGG+AGG + Chr8:69576504-69576523 None:intergenic 40.0%
! CATTGATGTCGGGCTTTAAT+GGG + Chr8:69577921-69577940 None:intergenic 40.0%
! CGAGTTCATCGACATTGATT+GGG + Chr8:69578095-69578114 None:intergenic 40.0%
! CTAGGTTAACCATTCTGGAA+GGG + Chr8:69578332-69578351 None:intergenic 40.0%
! GGTGAAACTATTGGTGATAC+TGG - Chr8:69578138-69578157 MsG0880046135.01.T01:CDS 40.0%
! TACCCATACTAGCACTTTTC+CGG + Chr8:69575436-69575455 None:intergenic 40.0%
! TCACGACACTGTTTTCCATT+TGG - Chr8:69577252-69577271 MsG0880046135.01.T01:intron 40.0%
! TCCCTTTTCCTCTTCCATAT+TGG - Chr8:69577992-69578011 MsG0880046135.01.T01:intron 40.0%
! TTTTACTTGCCCTTCCAGAA+TGG - Chr8:69578320-69578339 MsG0880046135.01.T01:CDS 40.0%
!! ATCCGGAAAAGTGCTAGTAT+GGG - Chr8:69575431-69575450 MsG0880046135.01.T01:three_prime_UTR 40.0%
!! GTTTTCAAGATCCGAATCAC+AGG + Chr8:69575272-69575291 None:intergenic 40.0%
!! TTTTATTTGCAGGCACTCCA+TGG - Chr8:69576839-69576858 MsG0880046135.01.T01:CDS 40.0%
!!! GCCAAGCTTTATTTTTGTCC+AGG - Chr8:69576329-69576348 MsG0880046135.01.T01:intron 40.0%
AAAAACGGTTGAACCAGCCA+TGG + Chr8:69577492-69577511 None:intergenic 45.0%
AAACCAACCAGGGAACTAGT+TGG + Chr8:69577429-69577448 None:intergenic 45.0%
AACAGCTTCACACCACGATT+TGG + Chr8:69575389-69575408 None:intergenic 45.0%
AACCATCAGCACCATGATCA+GGG + Chr8:69575535-69575554 None:intergenic 45.0%
AAGCCCAGTGTAACAAATGC+AGG - Chr8:69578538-69578557 MsG0880046135.01.T01:five_prime_UTR 45.0%
AATACCGGGTCAAATACTCC+TGG - Chr8:69575494-69575513 MsG0880046135.01.T01:CDS 45.0%
AATCGTGGTGTGAAGCTGTT+TGG - Chr8:69575389-69575408 MsG0880046135.01.T01:three_prime_UTR 45.0%
ACGGGTCATGATTTCTGAAC+CGG + Chr8:69575321-69575340 None:intergenic 45.0%
AGAAGGTCCTTCTAGACAGT+CGG - Chr8:69578191-69578210 MsG0880046135.01.T01:CDS 45.0%
AGCCCAGTGTAACAAATGCA+GGG - Chr8:69578539-69578558 MsG0880046135.01.T01:five_prime_UTR 45.0%
AGTGTAACAAATGCAGGGAG+GGG - Chr8:69578544-69578563 MsG0880046135.01.T01:five_prime_UTR 45.0%
AGTTTACGAGACAGAGTCGA+GGG + Chr8:69578165-69578184 None:intergenic 45.0%
ATCAAGGACACCTACTCAAG+TGG - Chr8:69576948-69576967 MsG0880046135.01.T01:intron 45.0%
ATCCTTCCCAAGAGTGAGTA+GGG - Chr8:69576542-69576561 MsG0880046135.01.T01:intron 45.0%
ATTGGGCTCTTGGAATGTAC+TGG + Chr8:69578078-69578097 None:intergenic 45.0%
CAGAAGGAAAAGGAAAAGCG+AGG + Chr8:69577691-69577710 None:intergenic 45.0%
CAGTGTAACAAATGCAGGGA+GGG - Chr8:69578543-69578562 MsG0880046135.01.T01:five_prime_UTR 45.0%
CCCTAATGATCTGCAAGCAT+TGG - Chr8:69576202-69576221 MsG0880046135.01.T01:intron 45.0%
CGATGAAGAATGTGAGTCCA+TGG - Chr8:69577858-69577877 MsG0880046135.01.T01:intron 45.0%
GACTCACATTCTTCATCGAG+TGG + Chr8:69577856-69577875 None:intergenic 45.0%
GCCAATGCTTGCAGATCATT+AGG + Chr8:69576206-69576225 None:intergenic 45.0%
GCTTGTAGGCAGTAGTATCT+AGG - Chr8:69578365-69578384 MsG0880046135.01.T01:CDS 45.0%
GGAAGAGGAAAAGGGAAGAA+TGG + Chr8:69577988-69578007 None:intergenic 45.0%
GGACTGTATCCAGACCAATA+TGG + Chr8:69578009-69578028 None:intergenic 45.0%
GGTATTCAAAAGTCCAGACC+CGG + Chr8:69575480-69575499 None:intergenic 45.0%
GTCAGCTTCAATGGGGATTA+CGG - Chr8:69576774-69576793 MsG0880046135.01.T01:CDS 45.0%
GTTCTCATTGCAGCCACAAT+GGG - Chr8:69575345-69575364 MsG0880046135.01.T01:three_prime_UTR 45.0%
TAACCATCAGCACCATGATC+AGG + Chr8:69575536-69575555 None:intergenic 45.0%
TACTCACTCTTGGGAAGGAT+GGG + Chr8:69576542-69576561 None:intergenic 45.0%
TAGTTTACGAGACAGAGTCG+AGG + Chr8:69578166-69578185 None:intergenic 45.0%
TCAAATACTCCTGGTTCACC+TGG - Chr8:69575503-69575522 MsG0880046135.01.T01:CDS 45.0%
TCACATTCTTCATCGAGTGG+AGG + Chr8:69577853-69577872 None:intergenic 45.0%
TCAGGCAAAGCAATGTGTCT+AGG - Chr8:69576995-69577014 MsG0880046135.01.T01:intron 45.0%
TGAAAAGCCGACTGTCTAGA+AGG + Chr8:69578201-69578220 None:intergenic 45.0%
TGTCTTGAACCTTCGGGAAA+GGG + Chr8:69576377-69576396 None:intergenic 45.0%
TGTTCTCATTGCAGCCACAA+TGG - Chr8:69575344-69575363 MsG0880046135.01.T01:three_prime_UTR 45.0%
TTGGGCTCTTGGAATGTACT+GGG + Chr8:69578077-69578096 None:intergenic 45.0%
! ACTATATGGTTCGGCTCAAG+TGG - Chr8:69576242-69576261 MsG0880046135.01.T01:intron 45.0%
! ATCGACATTGATTGGGCTCT+TGG + Chr8:69578088-69578107 None:intergenic 45.0%
! CTCCCTGCATTTGTTACACT+GGG + Chr8:69578544-69578563 None:intergenic 45.0%
! GCATTGATGTCGGGCTTTAA+TGG + Chr8:69577922-69577941 None:intergenic 45.0%
! GGGTCTGGACTTTTGAATAC+CGG - Chr8:69575479-69575498 MsG0880046135.01.T01:CDS 45.0%
! GGTCTGGACTTTTGAATACC+GGG - Chr8:69575480-69575499 MsG0880046135.01.T01:CDS 45.0%
! TGCGGTACCATTGAAGTATC+AGG + Chr8:69577766-69577785 None:intergenic 45.0%
! TGCTGATGGTTATGGTTCTG+AGG - Chr8:69575544-69575563 MsG0880046135.01.T01:CDS 45.0%
! TTCTTGAGTTGTGCCCATTG+TGG + Chr8:69575361-69575380 None:intergenic 45.0%
! TTGATAGAACCATGGCTCTG+GGG - Chr8:69577348-69577367 MsG0880046135.01.T01:intron 45.0%
! TTTTTGTCCAGGTCGAACTC+TGG - Chr8:69576340-69576359 MsG0880046135.01.T01:intron 45.0%
!! ATGTTTGGTTTGGTCTCCCT+CGG + Chr8:69575189-69575208 None:intergenic 45.0%
!! GATCATGGTGCTGATGGTTA+TGG - Chr8:69575536-69575555 MsG0880046135.01.T01:CDS 45.0%
!! GATCCGGAAAAGTGCTAGTA+TGG - Chr8:69575430-69575449 MsG0880046135.01.T01:three_prime_UTR 45.0%
!! TGAACCAGGAGTATTTGACC+CGG + Chr8:69575501-69575520 None:intergenic 45.0%
!!! GGTTCTGAGGATTTTGTTCC+TGG - Chr8:69575557-69575576 MsG0880046135.01.T01:CDS 45.0%
!!! AATATTATATTTTTGATTTT+TGG - Chr8:69575773-69575792 MsG0880046135.01.T01:CDS 5.0%
AACCAGCCATGGTTGAACTG+CGG + Chr8:69577481-69577500 None:intergenic 50.0%
ACAAGCTGGGCAAAGGTGAT+TGG - Chr8:69576899-69576918 MsG0880046135.01.T01:intron 50.0%
ATCTAGGCCCTACTCACTCT+TGG + Chr8:69576552-69576571 None:intergenic 50.0%
ATGCCTCGGATCCTGTGATT+CGG - Chr8:69575258-69575277 MsG0880046135.01.T01:three_prime_UTR 50.0%
ATGTGTCTAGGCGGAAGAGA+CGG - Chr8:69577007-69577026 MsG0880046135.01.T01:intron 50.0%
ATTAAATACCGGGCTGTGGC+AGG - Chr8:69576148-69576167 MsG0880046135.01.T01:intron 50.0%
CAGGTCGAACTCTGGATTAC+CGG - Chr8:69576348-69576367 MsG0880046135.01.T01:intron 50.0%
CATCCTTCCCAAGAGTGAGT+AGG - Chr8:69576541-69576560 MsG0880046135.01.T01:intron 50.0%
CATTCTTCATCGAGTGGAGG+AGG + Chr8:69577850-69577869 None:intergenic 50.0%
CCAGTGTAACAAATGCAGGG+AGG - Chr8:69578542-69578561 MsG0880046135.01.T01:five_prime_UTR 50.0%
CCTGGTGAAAACCCTGATCA+TGG - Chr8:69575521-69575540 MsG0880046135.01.T01:CDS 50.0%
CGACATCAATGCACAAGCGT+CGG - Chr8:69577930-69577949 MsG0880046135.01.T01:intron 50.0%
CGGGAAGTAGAAGAAGAACC+AGG + Chr8:69575578-69575597 None:intergenic 50.0%
CTACTCACTCTTGGGAAGGA+TGG + Chr8:69576543-69576562 None:intergenic 50.0%
CTATGTTCCTCCTCAGTCCA+TGG + Chr8:69576859-69576878 None:intergenic 50.0%
CTCTTGGAATGTACTGGGGT+TGG + Chr8:69578072-69578091 None:intergenic 50.0%
GAACCAACTAGTTCCCTGGT+TGG - Chr8:69577423-69577442 MsG0880046135.01.T01:intron 50.0%
GCAGGCACCTGATACTTCAA+TGG - Chr8:69577756-69577775 MsG0880046135.01.T01:intron 50.0%
GCTGCAATGAGAACAACGAC+GGG + Chr8:69575339-69575358 None:intergenic 50.0%
GGACCTCATCCCCCATAATT+AGG + Chr8:69576030-69576049 None:intergenic 50.0%
GGATTGAACAAGCTGGGCAA+AGG - Chr8:69576892-69576911 MsG0880046135.01.T01:intron 50.0%
GGCAAAGCAATGTGTCTAGG+CGG - Chr8:69576998-69577017 MsG0880046135.01.T01:intron 50.0%
GGCTGCAATGAGAACAACGA+CGG + Chr8:69575340-69575359 None:intergenic 50.0%
GGGGTGAAACAAGCTAGACA+AGG + Chr8:69576185-69576204 None:intergenic 50.0%
GGTATAAGTCTCAGGCCATG+TGG - Chr8:69575930-69575949 MsG0880046135.01.T01:CDS 50.0%
GTGCCTAATTATGGGGGATG+AGG - Chr8:69576024-69576043 MsG0880046135.01.T01:intron 50.0%
GTGTCTTGAACCTTCGGGAA+AGG + Chr8:69576378-69576397 None:intergenic 50.0%
GTTGAACCGCAGTTCAACCA+TGG - Chr8:69577472-69577491 MsG0880046135.01.T01:intron 50.0%
GTTTACGAGACAGAGTCGAG+GGG + Chr8:69578164-69578183 None:intergenic 50.0%
TCTAGGCCCTACTCACTCTT+GGG + Chr8:69576551-69576570 None:intergenic 50.0%
TGGGCTCTTGGAATGTACTG+GGG + Chr8:69578076-69578095 None:intergenic 50.0%
TTCACCTCTCTCGTTCGATC+CGG - Chr8:69575299-69575318 MsG0880046135.01.T01:three_prime_UTR 50.0%
! AACCCTGATCATGGTGCTGA+TGG - Chr8:69575530-69575549 MsG0880046135.01.T01:CDS 50.0%
! AGCACTTTTCCGGATCCCAT+CGG + Chr8:69575426-69575445 None:intergenic 50.0%
! CCATGATCAGGGTTTTCACC+AGG + Chr8:69575524-69575543 None:intergenic 50.0%
! CCTCCCTGCATTTGTTACAC+TGG + Chr8:69578545-69578564 None:intergenic 50.0%
! CGACGCTTGTGCATTGATGT+CGG + Chr8:69577932-69577951 None:intergenic 50.0%
! GACGCTTGTGCATTGATGTC+GGG + Chr8:69577931-69577950 None:intergenic 50.0%
! GGAACTAGTTGGTTCCCTCT+CGG + Chr8:69577418-69577437 None:intergenic 50.0%
! TCTTTCTTAGGAGCTGGCTC+AGG + Chr8:69578030-69578049 None:intergenic 50.0%
!! AACCATGGCTCTGGGGTATT+TGG - Chr8:69577355-69577374 MsG0880046135.01.T01:intron 50.0%
!! TGTTTGGTTTGGTCTCCCTC+GGG + Chr8:69575188-69575207 None:intergenic 50.0%
AACCGCAGTTCAACCATGGC+TGG - Chr8:69577476-69577495 MsG0880046135.01.T01:intron 55.0%
AATAGCCGGACCGAACCAAC+CGG - Chr8:69577387-69577406 MsG0880046135.01.T01:intron 55.0%
CACAGAACAGTCCCACAAGC+TGG + Chr8:69578231-69578250 None:intergenic 55.0%
CACTCTTGGGAAGGATGGGA+AGG + Chr8:69576538-69576557 None:intergenic 55.0%
CGGTAATCCAGAGTTCGACC+TGG + Chr8:69576350-69576369 None:intergenic 55.0%
GAGGGAACCAACTAGTTCCC+TGG - Chr8:69577419-69577438 MsG0880046135.01.T01:intron 55.0%
GATCCGAATCACAGGATCCG+AGG + Chr8:69575264-69575283 None:intergenic 55.0%
GTCGAACTCTGGATTACCGG+AGG - Chr8:69576351-69576370 MsG0880046135.01.T01:intron 55.0%
GTGATTGGCGTGGAATTGCC+AGG - Chr8:69576914-69576933 MsG0880046135.01.T01:intron 55.0%
TCTGCAGCAGCAAAACCCGA+GGG - Chr8:69575170-69575189 MsG0880046135.01.T01:three_prime_UTR 55.0%
TGAACCGGATCGAACGAGAG+AGG + Chr8:69575306-69575325 None:intergenic 55.0%
TGCCAAATACCCCAGAGCCA+TGG + Chr8:69577360-69577379 None:intergenic 55.0%
! GGGTTTTCACCAGGTGAACC+AGG + Chr8:69575515-69575534 None:intergenic 55.0%
!! CTTAGCCACTATAGCGGGTC+CGG - Chr8:69575458-69575477 MsG0880046135.01.T01:exon 55.0%
!! TTAGCCACTATAGCGGGTCC+GGG - Chr8:69575459-69575478 MsG0880046135.01.T01:exon 55.0%
AACCAACCGGTTGTGCCGAG+AGG - Chr8:69577400-69577419 MsG0880046135.01.T01:intron 60.0%
AACCTTCGGGAAAGGGCCTC+CGG + Chr8:69576370-69576389 None:intergenic 60.0%
ACCAACCGGTTGTGCCGAGA+GGG - Chr8:69577401-69577420 MsG0880046135.01.T01:intron 60.0%
AGTGGAGGAGGAGCAGGCAA+AGG + Chr8:69577838-69577857 None:intergenic 60.0%
CTCTGCAGCAGCAAAACCCG+AGG - Chr8:69575169-69575188 MsG0880046135.01.T01:three_prime_UTR 60.0%
CTGGGCAAAGGTGATTGGCG+TGG - Chr8:69576904-69576923 MsG0880046135.01.T01:intron 60.0%
GGCCCTACTCACTCTTGGGA+AGG + Chr8:69576547-69576566 None:intergenic 60.0%
GTCAAACACCTGCCACAGCC+CGG + Chr8:69576159-69576178 None:intergenic 60.0%
GTGGAGGAGGAGCAGGCAAA+GGG + Chr8:69577837-69577856 None:intergenic 60.0%
TCATCGAGTGGAGGAGGAGC+AGG + Chr8:69577844-69577863 None:intergenic 60.0%
TGGTTCCCTCTCGGCACAAC+CGG + Chr8:69577409-69577428 None:intergenic 60.0%
! AGGCACTCCATGGACTGAGG+AGG - Chr8:69576849-69576868 MsG0880046135.01.T01:intron 60.0%
! CTCGGCACAACCGGTTGGTT+CGG + Chr8:69577400-69577419 None:intergenic 60.0%
! GCGTGACTGGCCACTTGAGT+AGG + Chr8:69576961-69576980 None:intergenic 60.0%
! GTCGGGCTTTAATGGGGCAG+AGG + Chr8:69577914-69577933 None:intergenic 60.0%
! TGCAGGCACTCCATGGACTG+AGG - Chr8:69576846-69576865 MsG0880046135.01.T01:CDS 60.0%
!! CACAACCGGTTGGTTCGGTC+CGG + Chr8:69577395-69577414 None:intergenic 60.0%
!! TGCACAAGCGTCGGCTTACC+CGG - Chr8:69577939-69577958 MsG0880046135.01.T01:intron 60.0%
CAGACCCGGACCCGCTATAG+TGG + Chr8:69575466-69575485 None:intergenic 65.0%
TACCGGAGGCCCTTTCCCGA+AGG - Chr8:69576365-69576384 MsG0880046135.01.T01:intron 65.0%
TCCCTCTCGGCACAACCGGT+TGG + Chr8:69577405-69577424 None:intergenic 65.0%
!! CACTATAGCGGGTCCGGGTC+TGG - Chr8:69575464-69575483 MsG0880046135.01.T01:exon 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 69575134 69578582 69575134 ID=MsG0880046135.01;Name=MsG0880046135.01
Chr8 mRNA 69575134 69578582 69575134 ID=MsG0880046135.01.T01;Parent=MsG0880046135.01;Name=MsG0880046135.01.T01;_AED=0.47;_eAED=0.47;_QI=198|0.33|0.5|1|0.33|0.5|4|331|389
Chr8 exon 69578105 69578582 69578105 ID=MsG0880046135.01.T01:exon:784;Parent=MsG0880046135.01.T01
Chr8 exon 69576568 69576865 69576568 ID=MsG0880046135.01.T01:exon:785;Parent=MsG0880046135.01.T01
Chr8 exon 69576377 69576476 69576377 ID=MsG0880046135.01.T01:exon:786;Parent=MsG0880046135.01.T01
Chr8 exon 69575134 69575956 69575134 ID=MsG0880046135.01.T01:exon:787;Parent=MsG0880046135.01.T01
Chr8 five_prime_UTR 69578385 69578582 69578385 ID=MsG0880046135.01.T01:five_prime_utr;Parent=MsG0880046135.01.T01
Chr8 CDS 69578105 69578384 69578105 ID=MsG0880046135.01.T01:cds;Parent=MsG0880046135.01.T01
Chr8 CDS 69576568 69576865 69576568 ID=MsG0880046135.01.T01:cds;Parent=MsG0880046135.01.T01
Chr8 CDS 69576377 69576476 69576377 ID=MsG0880046135.01.T01:cds;Parent=MsG0880046135.01.T01
Chr8 CDS 69575465 69575956 69575465 ID=MsG0880046135.01.T01:cds;Parent=MsG0880046135.01.T01
Chr8 three_prime_UTR 69575134 69575464 69575134 ID=MsG0880046135.01.T01:three_prime_utr;Parent=MsG0880046135.01.T01
Gene Sequence

>MsG0880046135.01.T01

ATGACCCGTCGTTGTTCTCATTGCAGCCACAATGGGCACAACTCAAGAACTTGTCCAAATCGTGGTGTGAAGCTGTTTGGAGTAAGATTAACCGATGGGATCCGGAAAAGTGCTAGTATGGGTAATCTTAGCCACTATAGCGGGTCCGGGTCTGGACTTTTGAATACCGGGTCAAATACTCCTGGTTCACCTGGTGAAAACCCTGATCATGGTGCTGATGGTTATGGTTCTGAGGATTTTGTTCCTGGTTCTTCTTCTACTTCCCGTGAAAGAAAAAAGGGCACTCCATGGACTGAGGAGGAACATAGAATGTTTTTACTTGGATTGAACAAGCTGGGCAAAGGTGATTGGCGTGGAATTGCCAGGAACTATGTTATATCAAGGACACCTACTCAAGTGGCCAGTCACGCTCAAAAATATTTCATCAGGCAAAGCAATGTGTCTAGGCGGAAGAGACGGTCCAGCCTGTTTGATATTGTTGCAGATGATGTTTGTCCCCTTATTTCCAAATTCTATATGCTTAAAATGTGTTTCCTTTACATTATGTTGCATATAATTAAATTGATGCCACATAACCTTGAATCTCATGTTCACGACACTGTTTTCCATTTGGGAAAATTGTCCATTTCCTGGATATTTTGGATGTTGATGACCTCTCTGTGTATTAATAATGTTCTGGCACCTGATACTTCAATGGTACCGCAAGACTTCTTGTCAGCTAATCAACTACAAACTGAAACAGAAGGCAATAACCCTTTGCCTGCTCCTCCTCCACTCGATGAAGAATGTGAGTCCATGGATTCTACAAACTCAAACGATGGAGAGTCTGCCTCTGCCCCATTAAAGCCCGACATCAATGCACAAGCGTCGGCTTACCCGGTAGTATATCCAGCATATTATTCTCCATTCTTCCCTTTTCCTCTTCCATATTGGTCTGGATACAGTCCTGAGCCAGCTCCTAAGAAAGAAACACATGAAGTGGTGAAGCCAACCCCAGTACATTCCAAGAGCCCAATCAATGTCGATGAACTCGTTGGCATGTCAAAACTGAGTTTAGGTGAAACTATTGGTGATACTGGCCCCTCGACTCTGTCTCGTAAACTACTTGAAGAAGGTCCTTCTAGACAGTCGGCTTTTCATACAACTCCAGCTTGTGGGACTGTTCTGTGA
Protein sequence

>MsG0880046135.01.T01

MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGIRKSASMGNLSHYSGSGSGLLNTGSNTPGSPGENPDHGADGYGSEDFVPGSSSTSRERKKGTPWTEEEHRMFLLGLNKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADDVCPLISKFYMLKMCFLYIMLHIIKLMPHNLESHVHDTVFHLGKLSISWIFWMLMTSLCINNVLAPDTSMVPQDFLSANQLQTETEGNNPLPAPPPLDEECESMDSTNSNDGESASAPLKPDINAQASAYPVVYPAYYSPFFPFPLPYWSGYSPEPAPKKETHEVVKPTPVHSKSPINVDELVGMSKLSLGETIGDTGPSTLSRKLLEEGPSRQSAFHTTPACGTVL*